#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P46957 uniprotkb:P47110 intact:EBI-6080|uniprotkb:D6VWI1|ensemblfungi:YJR006W intact:EBI-6084|uniprotkb:D6VWL4|ensemblfungi:YJR043C psi-mi:dpod2_yeast(display_long)|uniprotkb:POL31(gene name)|psi-mi:POL31(display_short)|uniprotkb:HUS2(gene name synonym)|uniprotkb:SDP5(gene name synonym)|uniprotkb:YJR006W(locus name)|uniprotkb:J1427(orf name)|uniprotkb:YJR83.7(orf name)|uniprotkb:Hydroxyurea-sensitive protein 2(gene name synonym)|uniprotkb:HYS2(gene name synonym) psi-mi:dpod3_yeast(display_long)|uniprotkb:POL32(gene name)|psi-mi:POL32(display_short)|uniprotkb:J1626(orf name)|uniprotkb:YJR043C(locus name) psi-mi:"MI:2339"(electron microscopy 3D single particle reconstruction) Jain et al. (2019) imex:IM-27595|pubmed:31582849 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-22186064|wwpdb:6P1H|emdb:EMD-20235|imex:IM-27595-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012539.1|sgd:S000003766|dip:DIP-2525N|mint:P46957|ensemblfungi:YJR006W(gene)|ensemblfungi:YJR006W_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003887"(DNA-directed DNA polymerase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006271"(DNA strand elongation involved in DNA replication)|go:"GO:0006272"(leading strand elongation)|go:"GO:0006273"(lagging strand elongation)|go:"GO:0006278"(RNA-dependent DNA biosynthetic process)|go:"GO:0006284"(base-excision repair)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006298"(mismatch repair)|go:"GO:0006301"(postreplication repair)|go:"GO:0042575"(DNA polymerase complex)|go:"GO:0043137"(DNA replication, removal of RNA primer)|go:"GO:0043625"(delta DNA polymerase complex)|go:"GO:0090305"(nucleic acid phosphodiester bond hydrolysis)|interpro:IPR007185(DNA polymerase alpha/epsilon, subunit B)|interpro:IPR024826|interpro:IPR040663|interpro:IPR041863|rcsb pdb:6P1H|rcsb pdb:6V8P|rcsb pdb:6V93|rcsb pdb:7LXD|reactome:R-SCE-69166|reactome:R-SCE-69183 refseq:NP_012577.1|sgd:S000003804|dip:DIP-2523N|mint:P47110|ensemblfungi:YJR043C(gene)|ensemblfungi:YJR043C_mRNA(transcript)|go:"GO:0000727"(double-strand break repair via break-induced replication)|go:"GO:0003887"(DNA-directed DNA polymerase activity)|go:"GO:0005634"(nucleus)|go:"GO:0006272"(leading strand elongation)|go:"GO:0006273"(lagging strand elongation)|go:"GO:0006277"(DNA amplification)|go:"GO:0006278"(RNA-dependent DNA biosynthetic process)|go:"GO:0006284"(base-excision repair)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0043137"(DNA replication, removal of RNA primer)|go:"GO:0043625"(delta DNA polymerase complex)|go:"GO:0090305"(nucleic acid phosphodiester bond hydrolysis)|rcsb pdb:6P1H|rcsb pdb:6V8P|rcsb pdb:6V93|rcsb pdb:7LXD - crc64:F9E200BFE97A2C07 crc64:D0B9CC52F26E20B2 figure legend:Fig. 1,Table 1|comment:"The structure includes three proteins (DNA polymerase delta catalytic subunit, DNA polymerase delta small subunit, and DNA polymerase delta subunit 3) which are reported here. The structure also includes a DNA chain consisting of 30 residues that is not reported here, since we only record protein-protein interactions."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2019/11/07 2019/11/07 rogid:/snR2U+Lgzyzq1V9PZG01x39304559292 rogid:02A0trLDLwbbYcE+AONHGaJ/XHM559292 rigid:Y7wtsRGQY02ceDefL+kyR7ghlT4 false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:P46957 uniprotkb:P15436 intact:EBI-6080|uniprotkb:D6VWI1|ensemblfungi:YJR006W intact:EBI-6134|uniprotkb:D6VRP8|ensemblfungi:YDL102W psi-mi:dpod2_yeast(display_long)|uniprotkb:POL31(gene name)|psi-mi:POL31(display_short)|uniprotkb:HUS2(gene name synonym)|uniprotkb:SDP5(gene name synonym)|uniprotkb:YJR006W(locus name)|uniprotkb:J1427(orf name)|uniprotkb:YJR83.7(orf name)|uniprotkb:Hydroxyurea-sensitive protein 2(gene name synonym)|uniprotkb:HYS2(gene name synonym) psi-mi:dpod_yeast(display_long)|uniprotkb:POL3(gene name)|psi-mi:POL3(display_short)|uniprotkb:CDC2(gene name synonym)|uniprotkb:TEX1(gene name synonym)|uniprotkb:YDL102W(locus name)|uniprotkb:D2366(orf name)|uniprotkb:DNA polymerase III(gene name synonym)|uniprotkb:3'-5' exodeoxyribonuclease(gene name synonym) psi-mi:"MI:2339"(electron microscopy 3D single particle reconstruction) Jain et al. (2019) imex:IM-27595|pubmed:31582849 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-22186064|wwpdb:6P1H|emdb:EMD-20235|imex:IM-27595-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012539.1|sgd:S000003766|dip:DIP-2525N|mint:P46957|ensemblfungi:YJR006W(gene)|ensemblfungi:YJR006W_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003887"(DNA-directed DNA polymerase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006271"(DNA strand elongation involved in DNA replication)|go:"GO:0006272"(leading strand elongation)|go:"GO:0006273"(lagging strand elongation)|go:"GO:0006278"(RNA-dependent DNA biosynthetic process)|go:"GO:0006284"(base-excision repair)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006298"(mismatch repair)|go:"GO:0006301"(postreplication repair)|go:"GO:0042575"(DNA polymerase complex)|go:"GO:0043137"(DNA replication, removal of RNA primer)|go:"GO:0043625"(delta DNA polymerase complex)|go:"GO:0090305"(nucleic acid phosphodiester bond hydrolysis)|interpro:IPR007185(DNA polymerase alpha/epsilon, subunit B)|interpro:IPR024826|interpro:IPR040663|interpro:IPR041863|rcsb pdb:6P1H|rcsb pdb:6V8P|rcsb pdb:6V93|rcsb pdb:7LXD|reactome:R-SCE-69166|reactome:R-SCE-69183 refseq:NP_010181.2|sgd:S000002260|dip:DIP-2524N|mint:P15436|ensemblfungi:YDL102W(gene)|ensemblfungi:YDL102W_mRNA(transcript)|go:"GO:0000166"(nucleotide binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003887"(DNA-directed DNA polymerase activity)|go:"GO:0005657"(replication fork)|go:"GO:0005829"(cytosol)|go:"GO:0006260"(DNA replication)|go:"GO:0006261"(DNA-dependent DNA replication)|go:"GO:0006278"(RNA-dependent DNA biosynthetic process)|go:"GO:0006287"(base-excision repair, gap-filling)|go:"GO:0006297"(nucleotide-excision repair, DNA gap filling)|go:"GO:0008296"(3'-5'-exodeoxyribonuclease activity)|go:"GO:0043137"(DNA replication, removal of RNA primer)|go:"GO:0043625"(delta DNA polymerase complex)|go:"GO:0045004"(DNA replication proofreading)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006133(DNA-directed DNA polymerase, family B, exonuclease)|interpro:IPR006134(DNA-directed DNA polymerase, family B, conserved region)|interpro:IPR006172(DNA-directed DNA polymerase, family B)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR017964|interpro:IPR023211|interpro:IPR025687|interpro:IPR036397|interpro:IPR042087|interpro:IPR043502|rcsb pdb:3IAY|rcsb pdb:6P1H|rcsb pdb:7KC0|reactome:R-SCE-69166|reactome:R-SCE-69183 - crc64:F9E200BFE97A2C07 crc64:16E4245C5DCC66DB figure legend:Fig. 1,Table 1|comment:"The structure includes three proteins (DNA polymerase delta catalytic subunit, DNA polymerase delta small subunit, and DNA polymerase delta subunit 3) which are reported here. The structure also includes a DNA chain consisting of 30 residues that is not reported here, since we only record protein-protein interactions."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2019/11/07 2019/11/07 rogid:/snR2U+Lgzyzq1V9PZG01x39304559292 rogid:B6UmbmYRvxvUeMx9GmQ/nLy81+M559292 rigid:Y7wtsRGQY02ceDefL+kyR7ghlT4 false - flag tag:?-? 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination)