#ID(s) interactor A	ID(s) interactor B	Alt. ID(s) interactor A	Alt. ID(s) interactor B	Alias(es) interactor A	Alias(es) interactor B	Interaction detection method(s)	Publication 1st author(s)	Publication Identifier(s)	Taxid interactor A	Taxid interactor B	Interaction type(s)	Source database(s)	Interaction identifier(s)	Confidence value(s)	Expansion method(s)	Biological role(s) interactor A	Biological role(s) interactor B	Experimental role(s) interactor A	Experimental role(s) interactor B	Type(s) interactor A	Type(s) interactor B	Xref(s) interactor A	Xref(s) interactor B	Interaction Xref(s)	Annotation(s) interactor A	Annotation(s) interactor B	Interaction annotation(s)	Host organism(s)	Interaction parameter(s)	Creation date	Update date	Checksum(s) interactor A	Checksum(s) interactor B	Interaction Checksum(s)	Negative	Feature(s) interactor A	Feature(s) interactor B	Stoichiometry(s) interactor A	Stoichiometry(s) interactor B	Identification method participant A	Identification method participant B
uniprotkb:Q9FXT8	uniprotkb:Q9LGE3	intact:EBI-6050314|ensemblplants:Os02t0199900-01	intact:EBI-6050331|uniprotkb:A0A0P0V0S4|ensemblplants:Os01t0257300-01	psi-mi:q9fxt8_orysj(display_long)|uniprotkb:OsRPT4(gene name)|psi-mi:OsRPT4(display_short)|uniprotkb:Os02g0199900(locus name)|uniprotkb:OSNPB_020199900(orf name)	psi-mi:flp1_orysj(display_long)|uniprotkb:RAA1(gene name)|psi-mi:RAA1(display_short)|uniprotkb:FPF1-like protein 1(gene name synonym)|uniprotkb:Protein ROOT ARCHITECTURE ASSOCIATED 1(gene name synonym)|uniprotkb:OsJ_01159(orf name)|uniprotkb:P0462H08.5(orf name)|uniprotkb:LOC_Os01g15340(locus name)|uniprotkb:Os01g0257300(locus name)	psi-mi:"MI:0018"(two hybrid)	Han et al. (2008)	pubmed:18701670|imex:IM-17237	taxid:39947(orysj)|taxid:39947("Oryza sativa subsp. japonica (Rice)")	taxid:39947(orysj)|taxid:39947("Oryza sativa subsp. japonica (Rice)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-6050305|imex:IM-17237-1	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	interpro:IPR005937(26S proteasome subunit P45)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|refseq:XP_015624666.1|interpro:IPR032501|interpro:IPR027417|interpro:IPR041569|ensemblplants:Os02g0199900(gene)|ensemblplants:Os02t0199900-01(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0008540"(proteasome regulatory particle, base subcomplex)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031597"(cytosolic proteasome complex)|go:"GO:0036402"(proteasome-activating activity)|go:"GO:0045899"(positive regulation of RNA polymerase II transcription preinitiation complex assembly)	refseq:XP_015631985.1|interpro:IPR039274|ensemblplants:Os01g0257300(gene)|ensemblplants:Os01t0257300-01(transcript)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009733"(response to auxin)|go:"GO:0009909"(regulation of flower development)|go:"GO:0045841"(negative regulation of mitotic metaphase/anaphase transition)|go:"GO:2000280"(regulation of root development)	-	-	-	figure legend:Fig. 1A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2012/03/28	2014/10/16	rogid:xpv9HfLIB+Svm+oF59Ky2aULmNc39947	rogid:T41PIaBfL+r/R5EAbU7yV1k40dc39947	intact-crc:73ACBBE05627D4E0|rigid:1S6awVE1Of3XYPu4cOAVD6B+/a4	false	-	-	-	-	psi-mi:"MI:0078"(nucleotide sequence identification)	psi-mi:"MI:0078"(nucleotide sequence identification)
uniprotkb:Q9LGE3	uniprotkb:Q9FXT8	intact:EBI-6050331|uniprotkb:A0A0P0V0S4|ensemblplants:Os01t0257300-01	intact:EBI-6050314|ensemblplants:Os02t0199900-01	psi-mi:flp1_orysj(display_long)|uniprotkb:RAA1(gene name)|psi-mi:RAA1(display_short)|uniprotkb:FPF1-like protein 1(gene name synonym)|uniprotkb:Protein ROOT ARCHITECTURE ASSOCIATED 1(gene name synonym)|uniprotkb:OsJ_01159(orf name)|uniprotkb:P0462H08.5(orf name)|uniprotkb:LOC_Os01g15340(locus name)|uniprotkb:Os01g0257300(locus name)	psi-mi:q9fxt8_orysj(display_long)|uniprotkb:OsRPT4(gene name)|psi-mi:OsRPT4(display_short)|uniprotkb:Os02g0199900(locus name)|uniprotkb:OSNPB_020199900(orf name)	psi-mi:"MI:0018"(two hybrid)	Han et al. (2008)	pubmed:18701670|imex:IM-17237	taxid:39947(orysj)|taxid:39947("Oryza sativa subsp. japonica (Rice)")	taxid:39947(orysj)|taxid:39947("Oryza sativa subsp. japonica (Rice)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-6050371|imex:IM-17237-3	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:XP_015631985.1|interpro:IPR039274|ensemblplants:Os01g0257300(gene)|ensemblplants:Os01t0257300-01(transcript)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009733"(response to auxin)|go:"GO:0009909"(regulation of flower development)|go:"GO:0045841"(negative regulation of mitotic metaphase/anaphase transition)|go:"GO:2000280"(regulation of root development)	interpro:IPR005937(26S proteasome subunit P45)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|refseq:XP_015624666.1|interpro:IPR032501|interpro:IPR027417|interpro:IPR041569|ensemblplants:Os02g0199900(gene)|ensemblplants:Os02t0199900-01(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0008540"(proteasome regulatory particle, base subcomplex)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031597"(cytosolic proteasome complex)|go:"GO:0036402"(proteasome-activating activity)|go:"GO:0045899"(positive regulation of RNA polymerase II transcription preinitiation complex assembly)	-	-	-	figure legend:Fig. 1C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2012/03/28	2014/10/16	rogid:T41PIaBfL+r/R5EAbU7yV1k40dc39947	rogid:xpv9HfLIB+Svm+oF59Ky2aULmNc39947	intact-crc:7ACA8A99E261D976|rigid:1S6awVE1Of3XYPu4cOAVD6B+/a4	false	-	sufficient binding region:168-313|sufficient binding region:1-167	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q9FXT8	uniprotkb:Q9LGE3	intact:EBI-6050314|ensemblplants:Os02t0199900-01	intact:EBI-6050331|uniprotkb:A0A0P0V0S4|ensemblplants:Os01t0257300-01	psi-mi:q9fxt8_orysj(display_long)|uniprotkb:OsRPT4(gene name)|psi-mi:OsRPT4(display_short)|uniprotkb:Os02g0199900(locus name)|uniprotkb:OSNPB_020199900(orf name)	psi-mi:flp1_orysj(display_long)|uniprotkb:RAA1(gene name)|psi-mi:RAA1(display_short)|uniprotkb:FPF1-like protein 1(gene name synonym)|uniprotkb:Protein ROOT ARCHITECTURE ASSOCIATED 1(gene name synonym)|uniprotkb:OsJ_01159(orf name)|uniprotkb:P0462H08.5(orf name)|uniprotkb:LOC_Os01g15340(locus name)|uniprotkb:Os01g0257300(locus name)	psi-mi:"MI:0018"(two hybrid)	Han et al. (2008)	pubmed:18701670|imex:IM-17237	taxid:39947(orysj)|taxid:39947("Oryza sativa subsp. japonica (Rice)")	taxid:39947(orysj)|taxid:39947("Oryza sativa subsp. japonica (Rice)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-6050364|imex:IM-17237-2	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	interpro:IPR005937(26S proteasome subunit P45)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|refseq:XP_015624666.1|interpro:IPR032501|interpro:IPR027417|interpro:IPR041569|ensemblplants:Os02g0199900(gene)|ensemblplants:Os02t0199900-01(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0008540"(proteasome regulatory particle, base subcomplex)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031597"(cytosolic proteasome complex)|go:"GO:0036402"(proteasome-activating activity)|go:"GO:0045899"(positive regulation of RNA polymerase II transcription preinitiation complex assembly)	refseq:XP_015631985.1|interpro:IPR039274|ensemblplants:Os01g0257300(gene)|ensemblplants:Os01t0257300-01(transcript)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009733"(response to auxin)|go:"GO:0009909"(regulation of flower development)|go:"GO:0045841"(negative regulation of mitotic metaphase/anaphase transition)|go:"GO:2000280"(regulation of root development)	-	-	-	figure legend:Fig. 1B|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2012/03/28	2014/10/16	rogid:xpv9HfLIB+Svm+oF59Ky2aULmNc39947	rogid:T41PIaBfL+r/R5EAbU7yV1k40dc39947	intact-crc:06DBAF68063DCCCC|rigid:1S6awVE1Of3XYPu4cOAVD6B+/a4	false	-	sufficient binding region:55-109	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q9LGE3	uniprotkb:Q9FXT8	intact:EBI-6050331|uniprotkb:A0A0P0V0S4|ensemblplants:Os01t0257300-01	intact:EBI-6050314|ensemblplants:Os02t0199900-01	psi-mi:flp1_orysj(display_long)|uniprotkb:RAA1(gene name)|psi-mi:RAA1(display_short)|uniprotkb:FPF1-like protein 1(gene name synonym)|uniprotkb:Protein ROOT ARCHITECTURE ASSOCIATED 1(gene name synonym)|uniprotkb:OsJ_01159(orf name)|uniprotkb:P0462H08.5(orf name)|uniprotkb:LOC_Os01g15340(locus name)|uniprotkb:Os01g0257300(locus name)	psi-mi:q9fxt8_orysj(display_long)|uniprotkb:OsRPT4(gene name)|psi-mi:OsRPT4(display_short)|uniprotkb:Os02g0199900(locus name)|uniprotkb:OSNPB_020199900(orf name)	psi-mi:"MI:0096"(pull down)	Han et al. (2008)	pubmed:18701670|imex:IM-17237	taxid:39947(orysj)|taxid:39947("Oryza sativa subsp. japonica (Rice)")	taxid:39947(orysj)|taxid:39947("Oryza sativa subsp. japonica (Rice)")	psi-mi:"MI:0407"(direct interaction)	psi-mi:"MI:0486"(UniProt)	intact:EBI-6050474|imex:IM-17237-4	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:XP_015631985.1|interpro:IPR039274|ensemblplants:Os01g0257300(gene)|ensemblplants:Os01t0257300-01(transcript)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009733"(response to auxin)|go:"GO:0009909"(regulation of flower development)|go:"GO:0045841"(negative regulation of mitotic metaphase/anaphase transition)|go:"GO:2000280"(regulation of root development)	interpro:IPR005937(26S proteasome subunit P45)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|refseq:XP_015624666.1|interpro:IPR032501|interpro:IPR027417|interpro:IPR041569|ensemblplants:Os02g0199900(gene)|ensemblplants:Os02t0199900-01(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0008540"(proteasome regulatory particle, base subcomplex)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031597"(cytosolic proteasome complex)|go:"GO:0036402"(proteasome-activating activity)|go:"GO:0045899"(positive regulation of RNA polymerase II transcription preinitiation complex assembly)	-	-	-	figure legend:Fig. 2A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:-1(in vitro)|taxid:-1(In vitro)	-	2012/03/28	2014/10/16	rogid:T41PIaBfL+r/R5EAbU7yV1k40dc39947	rogid:xpv9HfLIB+Svm+oF59Ky2aULmNc39947	intact-crc:0A65375329C622AD|rigid:1S6awVE1Of3XYPu4cOAVD6B+/a4	false	glutathione s tranferase tag:?-?	his tag:?-?	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q9LGE3	uniprotkb:Q9FXT8	intact:EBI-6050331|uniprotkb:A0A0P0V0S4|ensemblplants:Os01t0257300-01	intact:EBI-6050314|ensemblplants:Os02t0199900-01	psi-mi:flp1_orysj(display_long)|uniprotkb:RAA1(gene name)|psi-mi:RAA1(display_short)|uniprotkb:FPF1-like protein 1(gene name synonym)|uniprotkb:Protein ROOT ARCHITECTURE ASSOCIATED 1(gene name synonym)|uniprotkb:OsJ_01159(orf name)|uniprotkb:P0462H08.5(orf name)|uniprotkb:LOC_Os01g15340(locus name)|uniprotkb:Os01g0257300(locus name)	psi-mi:q9fxt8_orysj(display_long)|uniprotkb:OsRPT4(gene name)|psi-mi:OsRPT4(display_short)|uniprotkb:Os02g0199900(locus name)|uniprotkb:OSNPB_020199900(orf name)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Han et al. (2008)	pubmed:18701670|imex:IM-17237	taxid:39947(orysj)|taxid:39947("Oryza sativa subsp. japonica (Rice)")	taxid:39947(orysj)|taxid:39947("Oryza sativa subsp. japonica (Rice)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-6050524|imex:IM-17237-5	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:XP_015631985.1|interpro:IPR039274|ensemblplants:Os01g0257300(gene)|ensemblplants:Os01t0257300-01(transcript)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009733"(response to auxin)|go:"GO:0009909"(regulation of flower development)|go:"GO:0045841"(negative regulation of mitotic metaphase/anaphase transition)|go:"GO:2000280"(regulation of root development)	interpro:IPR005937(26S proteasome subunit P45)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|refseq:XP_015624666.1|interpro:IPR032501|interpro:IPR027417|interpro:IPR041569|ensemblplants:Os02g0199900(gene)|ensemblplants:Os02t0199900-01(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0008540"(proteasome regulatory particle, base subcomplex)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031597"(cytosolic proteasome complex)|go:"GO:0036402"(proteasome-activating activity)|go:"GO:0045899"(positive regulation of RNA polymerase II transcription preinitiation complex assembly)	-	-	-	figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:39947(orysj-root)|taxid:39947("Rice (japonica) root")	-	2012/03/28	2014/10/16	rogid:T41PIaBfL+r/R5EAbU7yV1k40dc39947	rogid:xpv9HfLIB+Svm+oF59Ky2aULmNc39947	intact-crc:AF4FB82675D5D548|rigid:1S6awVE1Of3XYPu4cOAVD6B+/a4	false	glutathione s tranferase tag:?-?	his tag:?-?	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q9LGE3	uniprotkb:Q9FXT8	intact:EBI-6050331|uniprotkb:A0A0P0V0S4|ensemblplants:Os01t0257300-01	intact:EBI-6050314|ensemblplants:Os02t0199900-01	psi-mi:flp1_orysj(display_long)|uniprotkb:RAA1(gene name)|psi-mi:RAA1(display_short)|uniprotkb:FPF1-like protein 1(gene name synonym)|uniprotkb:Protein ROOT ARCHITECTURE ASSOCIATED 1(gene name synonym)|uniprotkb:OsJ_01159(orf name)|uniprotkb:P0462H08.5(orf name)|uniprotkb:LOC_Os01g15340(locus name)|uniprotkb:Os01g0257300(locus name)	psi-mi:q9fxt8_orysj(display_long)|uniprotkb:OsRPT4(gene name)|psi-mi:OsRPT4(display_short)|uniprotkb:Os02g0199900(locus name)|uniprotkb:OSNPB_020199900(orf name)	psi-mi:"MI:0809"(bimolecular fluorescence complementation)	Han et al. (2008)	pubmed:18701670|imex:IM-17237	taxid:39947(orysj)|taxid:39947("Oryza sativa subsp. japonica (Rice)")	taxid:39947(orysj)|taxid:39947("Oryza sativa subsp. japonica (Rice)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-6050551|imex:IM-17237-6	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:XP_015631985.1|interpro:IPR039274|ensemblplants:Os01g0257300(gene)|ensemblplants:Os01t0257300-01(transcript)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009733"(response to auxin)|go:"GO:0009909"(regulation of flower development)|go:"GO:0045841"(negative regulation of mitotic metaphase/anaphase transition)|go:"GO:2000280"(regulation of root development)	interpro:IPR005937(26S proteasome subunit P45)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|refseq:XP_015624666.1|interpro:IPR032501|interpro:IPR027417|interpro:IPR041569|ensemblplants:Os02g0199900(gene)|ensemblplants:Os02t0199900-01(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0008540"(proteasome regulatory particle, base subcomplex)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031597"(cytosolic proteasome complex)|go:"GO:0036402"(proteasome-activating activity)|go:"GO:0045899"(positive regulation of RNA polymerase II transcription preinitiation complex assembly)	-	-	-	figure legend:Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:3717(brasx)|taxid:3717("Brassica sp. (Mustard)")	-	2012/03/28	2014/10/16	rogid:T41PIaBfL+r/R5EAbU7yV1k40dc39947	rogid:xpv9HfLIB+Svm+oF59Ky2aULmNc39947	intact-crc:1B003221614F5B00|rigid:1S6awVE1Of3XYPu4cOAVD6B+/a4	false	nYFP:?-?	cYFP:?-?	-	-	psi-mi:"MI:0867"(tag visualisation by fluorescence)	psi-mi:"MI:0867"(tag visualisation by fluorescence)