2013-10-16 18:57:29,114 INFO  (ParserWrapper:186) parsing: ontology/extensions/x-signaling.owl
2013-10-16 18:57:29,116 INFO  (ParserWrapper:201) parsing: file:/Users/cjm/repos/go/experimental/lego/owl/gaf-derived/ontology/extensions/x-signaling.owl using uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl@1f950198
2013-10-16 18:57:29,118 INFO  (ParserWrapper:68) Start loading ontology: file:/Users/cjm/repos/go/experimental/lego/owl/gaf-derived/ontology/extensions/x-signaling.owl from: file:/Users/cjm/repos/go/experimental/lego/owl/gaf-derived/ontology/extensions/x-signaling.owl
2013-10-16 18:57:29,228 INFO  (ParserWrapper:68) Start loading ontology: http://purl.obolibrary.org/obo/go/extensions/ro_import.owl from: file:/Users/cjm/repos/go/ontology/extensions/ro_import.owl
2013-10-16 18:57:29,402 INFO  (ParserWrapper:75) Finished loading ontology: http://purl.obolibrary.org/obo/go/extensions/ro_import.owl from: file:/Users/cjm/repos/go/ontology/extensions/ro_import.owl
2013-10-16 18:57:29,403 INFO  (ParserWrapper:68) Start loading ontology: http://purl.obolibrary.org/obo/go.owl from: file:/Users/cjm/repos/go/ontology/go.owl
2013-10-16 18:57:38,397 INFO  (ParserWrapper:75) Finished loading ontology: http://purl.obolibrary.org/obo/go.owl from: file:/Users/cjm/repos/go/ontology/go.owl
2013-10-16 18:57:38,398 INFO  (ParserWrapper:68) Start loading ontology: http://purl.obolibrary.org/obo/go/extensions/x-mf-protein.owl from: file:/Users/cjm/repos/go/ontology/extensions/x-mf-protein.owl
2013-10-16 18:57:38,506 INFO  (ParserWrapper:75) Finished loading ontology: http://purl.obolibrary.org/obo/go/extensions/x-mf-protein.owl from: file:/Users/cjm/repos/go/ontology/extensions/x-mf-protein.owl
2013-10-16 18:57:38,506 INFO  (ParserWrapper:68) Start loading ontology: http://purl.obolibrary.org/obo/go/extensions/pr_import.owl from: file:/Users/cjm/repos/go/ontology/extensions/pr_import.owl
2013-10-16 18:57:38,518 INFO  (ParserWrapper:75) Finished loading ontology: http://purl.obolibrary.org/obo/go/extensions/pr_import.owl from: file:/Users/cjm/repos/go/ontology/extensions/pr_import.owl
2013-10-16 18:57:38,589 INFO  (ParserWrapper:75) Finished loading ontology: http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl from: file:/Users/cjm/repos/go/experimental/lego/owl/gaf-derived/ontology/extensions/x-signaling.owl
2013-10-16 18:57:38,853 INFO  (OWLGraphWrapperBasic:209) Adding 468055 from Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go.owl>) VersionIRI(<http://purl.obolibrary.org/obo/go/2013-10-16/go.owl>))) [Axioms: 468055 Logical Axioms: 86956]
2013-10-16 18:57:39,672 INFO  (OWLGraphWrapperBasic:209) Adding 1563 from Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-mf-protein.owl>))) [Axioms: 1563 Logical Axioms: 391]
2013-10-16 18:57:39,676 INFO  (OWLGraphWrapperBasic:209) Adding 978 from Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/pr_import.owl>))) [Axioms: 978 Logical Axioms: 325]
2013-10-16 18:57:39,678 INFO  (OWLGraphWrapperBasic:209) Adding 1422 from Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/ro_import.owl>))) [Axioms: 1422 Logical Axioms: 362]
2013-10-16 18:57:39,867 INFO  (MinimalModelGenerator:207) Creating abox ontology. mgr = uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl@1f950198
2013-10-16 18:57:39,867 INFO  (MinimalModelGenerator:221) Creating query ontology
2013-10-16 18:57:39,867 INFO  (MinimalModelGenerator:232) manager(T) = uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl@1f950198
2013-10-16 18:57:39,868 INFO  (MinimalModelGenerator:233) manager(A) = uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl@1f950198
2013-10-16 18:57:39,868 INFO  (MinimalModelGenerator:234) manager(Q) = uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl@1f950198
2013-10-16 18:57:39,993 INFO  (MinimalModelGenerator:250) Creating reasoner on Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__query>))) [Axioms: 0 Logical Axioms: 0] ImportsClosure=[Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 0 Logical Axioms: 0], Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__query>))) [Axioms: 0 Logical Axioms: 0], Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl>))) [Axioms: 471141 Logical Axioms: 88146]]
2013-10-16 18:57:40,067 INFO  (Reasoner:117) ELK reasoner was created
2013-10-16 18:57:40,300 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002295> <http://purl.obolibrary.org/obo/CARO_0000003>)
2013-10-16 18:57:40,434 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/BFO_0000054> <http://purl.obolibrary.org/obo/BFO_0000007>)
2013-10-16 18:57:40,509 WARN  (ChangeIndexingProcessor:66) ELK does not support SymmetricObjectProperty. Axiom ignored:
SymmetricObjectProperty(<http://purl.obolibrary.org/obo/RO_0002371>)
2013-10-16 18:57:40,516 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002222> <http://purl.obolibrary.org/obo/BFO_0000003>)
2013-10-16 18:57:40,520 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002337> <http://purl.obolibrary.org/obo/BFO_0000002>)
2013-10-16 18:57:40,521 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002220> <http://purl.obolibrary.org/obo/BFO_0000004>)
2013-10-16 18:57:40,546 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/BFO_0000062> <http://purl.obolibrary.org/obo/BFO_0000003>)
2013-10-16 18:57:40,547 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/BFO_0000063> <http://purl.obolibrary.org/obo/BFO_0000003>)
2013-10-16 18:57:40,552 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/BFO_0000004>)
2013-10-16 18:57:40,578 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002101> <http://purl.obolibrary.org/obo/CARO_0001001>)
2013-10-16 18:57:40,599 WARN  (IndexedObjectUnionOf:92) ELK does not support positive occurrences of ObjectUnionOf. Reasoning might be incomplete!
2013-10-16 18:57:40,611 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002202> <http://purl.obolibrary.org/obo/BFO_0000004>)
2013-10-16 18:57:40,613 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002204> <http://purl.obolibrary.org/obo/BFO_0000002>)
2013-10-16 18:57:40,616 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002205> <http://purl.obolibrary.org/obo/BFO_0000004>)
2013-10-16 18:57:40,618 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002206> <http://purl.obolibrary.org/obo/BFO_0000004>)
2013-10-16 18:57:40,629 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002215> <http://purl.obolibrary.org/obo/BFO_0000007>)
2013-10-16 18:57:40,632 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002214> <http://purl.obolibrary.org/obo/BFO_0000002>)
2013-10-16 18:57:40,679 WARN  (ChangeIndexingProcessor:66) ELK does not support FunctionalObjectProperty. Axiom ignored:
FunctionalObjectProperty(<http://purl.obolibrary.org/obo/RO_0002201>)
2013-10-16 18:57:40,698 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002091> <http://purl.obolibrary.org/obo/BFO_0000003>)
2013-10-16 18:57:40,722 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0001025> <http://purl.obolibrary.org/obo/RO_0001015>)
2013-10-16 18:57:40,724 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0001001> <http://purl.obolibrary.org/obo/RO_0001000>)
2013-10-16 18:57:40,727 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0001018> <http://purl.obolibrary.org/obo/RO_0001019>)
2013-10-16 18:57:40,729 WARN  (ChangeIndexingProcessor:66) ELK does not support IrreflexiveObjectProperty. Axiom ignored:
IrreflexiveObjectProperty(<http://purl.obolibrary.org/obo/RO_0002351>)
2013-10-16 18:57:40,739 WARN  (ChangeIndexingProcessor:66) ELK does not support SymmetricObjectProperty. Axiom ignored:
SymmetricObjectProperty(<http://purl.obolibrary.org/obo/RO_0002159>)
2013-10-16 18:57:40,740 WARN  (ChangeIndexingProcessor:66) ELK does not support SymmetricObjectProperty. Axiom ignored:
SymmetricObjectProperty(<http://purl.obolibrary.org/obo/RO_0002158>)
2013-10-16 18:57:40,754 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectAllValuesFrom. Axiom ignored:
SubClassOf(<http://purl.obolibrary.org/obo/CL_0000000> ObjectAllValuesFrom(<http://purl.obolibrary.org/obo/RO_0002207> <http://purl.obolibrary.org/obo/CL_0000000>))
2013-10-16 18:57:40,769 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0000057> <http://purl.obolibrary.org/obo/RO_0000056>)
2013-10-16 18:57:40,769 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0000053> <http://purl.obolibrary.org/obo/RO_0000052>)
2013-10-16 18:57:40,784 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002207> ObjectUnionOf(<http://purl.obolibrary.org/obo/CARO_0010000> <http://purl.obolibrary.org/obo/CL_0000000>))
2013-10-16 18:57:40,814 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectInverseOf. Axiom ignored:
SubObjectPropertyOf(ObjectPropertyChain(<http://purl.obolibrary.org/obo/RO_0001025> ObjectInverseOf(<http://purl.obolibrary.org/obo/RO_0001025>)) <http://purl.obolibrary.org/obo/RO_0002379>)
2013-10-16 18:57:40,824 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002132> ObjectUnionOf(<http://purl.obolibrary.org/obo/CL_0000540> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/CL_0000540>)))
2013-10-16 18:57:40,834 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002150> <http://purl.obolibrary.org/obo/BFO_0000004>)
2013-10-16 18:57:40,842 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectAllValuesFrom. Axiom ignored:
SubClassOf(<http://purl.obolibrary.org/obo/CARO_0010000> ObjectAllValuesFrom(<http://purl.obolibrary.org/obo/RO_0002207> <http://purl.obolibrary.org/obo/CARO_0010000>))
2013-10-16 18:57:40,856 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002162> <http://purl.obolibrary.org/obo/BFO_0000004>)
2013-10-16 18:57:40,882 WARN  (ChangeIndexingProcessor:66) ELK does not support DisjointUnion. Axiom ignored:
DisjointUnion(<http://purl.obolibrary.org/obo/GO_0016055> <http://purl.obolibrary.org/obo/GO_0035567> <http://purl.obolibrary.org/obo/GO_0060070>)
2013-10-16 18:57:40,884 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002103> ObjectUnionOf(<http://purl.obolibrary.org/obo/CL_0000540> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/CL_0000540>)))
2013-10-16 18:57:40,899 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002303> <http://purl.obolibrary.org/obo/ENVO_0002036>)
2013-10-16 18:57:40,924 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002333> <http://purl.obolibrary.org/obo/RO_0002327>)
2013-10-16 18:57:40,932 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002350> <http://purl.obolibrary.org/obo/RO_0002351>)
2013-10-16 18:57:40,959 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002315> <http://purl.obolibrary.org/obo/CL_0000000>)
2013-10-16 18:57:40,977 WARN  (IndexedObjectUnionOf:92) ELK does not support positive occurrences of ObjectUnionOf. Reasoning might be incomplete!
2013-10-16 18:57:41,047 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002006> <http://purl.obolibrary.org/obo/RO_0002130>)
2013-10-16 18:57:41,048 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002005> <http://purl.obolibrary.org/obo/RO_0002134>)
2013-10-16 18:57:41,051 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002349> <http://purl.obolibrary.org/obo/CL_0000000>)
2013-10-16 18:57:41,054 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002348> <http://purl.obolibrary.org/obo/CL_0000000>)
2013-10-16 18:57:41,056 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002084> <http://purl.obolibrary.org/obo/RO_0002093>)
2013-10-16 18:57:41,056 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002085> <http://purl.obolibrary.org/obo/RO_0002092>)
2013-10-16 18:57:41,056 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002087> <http://purl.obolibrary.org/obo/RO_0002090>)
2013-10-16 18:57:41,056 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002088> <http://purl.obolibrary.org/obo/RO_0002091>)
2013-10-16 18:57:41,067 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002107> <http://purl.obolibrary.org/obo/RO_0002108>)
2013-10-16 18:57:41,068 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002105> <http://purl.obolibrary.org/obo/RO_0002109>)
2013-10-16 18:57:41,079 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0003000> <http://purl.obolibrary.org/obo/BFO_0000040>)
2013-10-16 18:57:41,085 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0003001> <http://purl.obolibrary.org/obo/BFO_0000040>)
2013-10-16 18:57:41,088 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectInverseOf. Axiom ignored:
SubObjectPropertyOf(<http://purl.obolibrary.org/obo/RO_0002378> ObjectInverseOf(<http://purl.obolibrary.org/obo/RO_0002376>))
2013-10-16 18:57:41,091 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/BFO_0000051>)
2013-10-16 18:57:41,091 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/BFO_0000055> <http://purl.obolibrary.org/obo/BFO_0000054>)
2013-10-16 18:57:41,092 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/BFO_0000062> <http://purl.obolibrary.org/obo/BFO_0000063>)
2013-10-16 18:57:41,092 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/BFO_0000067>)
2013-10-16 18:57:41,097 WARN  (IndexedObjectUnionOf:92) ELK does not support positive occurrences of ObjectUnionOf. Reasoning might be incomplete!
2013-10-16 18:57:41,101 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002002> <http://purl.obolibrary.org/obo/RO_0002000>)
2013-10-16 18:57:41,101 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0003000> <http://purl.obolibrary.org/obo/RO_0003001>)
2013-10-16 18:57:41,116 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002293> <http://purl.obolibrary.org/obo/RO_0002291>)
2013-10-16 18:57:41,117 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectInverseOf. Axiom ignored:
SubObjectPropertyOf(<http://purl.obolibrary.org/obo/RO_0002333> ObjectInverseOf(<http://purl.obolibrary.org/obo/RO_0002215>))
2013-10-16 18:57:41,119 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002286> <http://purl.obolibrary.org/obo/RO_0002258>)
2013-10-16 18:57:41,120 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002257> <http://purl.obolibrary.org/obo/RO_0002256>)
2013-10-16 18:57:41,122 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002229> <http://purl.obolibrary.org/obo/RO_0002230>)
2013-10-16 18:57:41,123 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002221> <http://purl.obolibrary.org/obo/RO_0002219>)
2013-10-16 18:57:41,124 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002224> <http://purl.obolibrary.org/obo/RO_0002223>)
2013-10-16 18:57:41,124 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002292> <http://purl.obolibrary.org/obo/RO_0002206>)
2013-10-16 18:57:41,124 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002255> <http://purl.obolibrary.org/obo/RO_0002254>)
2013-10-16 18:57:41,133 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002217> <http://purl.obolibrary.org/obo/RO_0002218>)
2013-10-16 18:57:41,133 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002201> <http://purl.obolibrary.org/obo/RO_0002200>)
2013-10-16 18:57:41,133 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002203> <http://purl.obolibrary.org/obo/RO_0002202>)
2013-10-16 18:57:41,134 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002205> <http://purl.obolibrary.org/obo/RO_0002204>)
2013-10-16 18:57:41,134 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002210> <http://purl.obolibrary.org/obo/RO_0002207>)
2013-10-16 18:57:41,139 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002353> <http://purl.obolibrary.org/obo/RO_0002234>)
2013-10-16 18:57:41,139 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002352> <http://purl.obolibrary.org/obo/RO_0002233>)
2013-10-16 18:57:41,141 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002354> <http://purl.obolibrary.org/obo/RO_0002297>)
2013-10-16 18:57:41,143 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002335> <http://purl.obolibrary.org/obo/RO_0002212>)
2013-10-16 18:57:41,143 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002336> <http://purl.obolibrary.org/obo/RO_0002213>)
2013-10-16 18:57:41,144 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002334> <http://purl.obolibrary.org/obo/RO_0002211>)
2013-10-16 18:57:41,147 WARN  (ChangeIndexingProcessor:66) ELK does not support DisjointObjectProperties. Axiom ignored:
DisjointObjectProperties(<http://purl.obolibrary.org/obo/RO_0002378> <http://purl.obolibrary.org/obo/RO_0002382>)
2013-10-16 18:57:41,148 WARN  (ChangeIndexingProcessor:66) ELK does not support DisjointObjectProperties. Axiom ignored:
DisjointObjectProperties(<http://purl.obolibrary.org/obo/RO_0002378> <http://purl.obolibrary.org/obo/RO_0002383>)
2013-10-16 18:57:41,163 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0000057> <http://purl.obolibrary.org/obo/BFO_0000002>)
2013-10-16 18:57:41,164 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0000056> <http://purl.obolibrary.org/obo/BFO_0000003>)
2013-10-16 18:57:41,164 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002156> <http://purl.obolibrary.org/obo/RO_0002157>)
2013-10-16 18:57:41,167 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002132> <http://purl.obolibrary.org/obo/RO_0002101>)
2013-10-16 18:57:41,168 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002106> <http://purl.obolibrary.org/obo/RO_0002112>)
2013-10-16 18:57:41,169 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002110> <http://purl.obolibrary.org/obo/RO_0002102>)
2013-10-16 18:57:41,169 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002114> <http://purl.obolibrary.org/obo/RO_0002115>)
2013-10-16 18:57:41,169 WARN  (ChangeIndexingProcessor:66) ELK does not support InverseObjectProperties. Axiom ignored:
InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0002103> <http://purl.obolibrary.org/obo/RO_0002120>)
2013-10-16 18:57:41,187 WARN  (ChangeIndexingProcessor:66) ELK does not support ObjectPropertyRange. Axiom ignored:
ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0002356> <http://purl.obolibrary.org/obo/CL_0000000>)
2013-10-16 18:57:41,231 INFO  (MinimalModelGenerator:389) GNI type:<http://purl.obolibrary.org/obo/GO_0038092> // src=null via null
2013-10-16 18:57:41,233 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(<http://purl.obolibrary.org/obo/GO_0038092> <http://purl.obolibrary.org/obo/GO_0038092-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 0 Logical Axioms: 0]
2013-10-16 18:57:41,233 INFO  (MinimalModelGenerator:436)  I:<http://purl.obolibrary.org/obo/GO_0038092-proto>
2013-10-16 18:57:41,233 INFO  (MinimalModelGenerator:1091) Finding all nested anonymous expressions
2013-10-16 18:57:41,900 INFO  (MinimalModelGenerator:1103) TOTAL axioms in QMAP: 12168
2013-10-16 18:57:41,925 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:41,928 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:42,054 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 125 ms
2013-10-16 18:57:42,054 INFO  (LoggingStageExecutor:70) Property Saturation Initialization started
2013-10-16 18:57:42,055 INFO  (AbstractReasonerStage:179) Property Saturation Initialization using 8 workers
2013-10-16 18:57:42,055 INFO  (LoggingStageExecutor:103) Property Saturation Initialization finished in 0 ms
2013-10-16 18:57:42,055 INFO  (LoggingStageExecutor:70) Reflexive Property Computation started
2013-10-16 18:57:42,058 INFO  (AbstractReasonerStage:179) Reflexive Property Computation using 8 workers
2013-10-16 18:57:42,066 INFO  (LoggingStageExecutor:103) Reflexive Property Computation finished in 10 ms
2013-10-16 18:57:42,066 INFO  (LoggingStageExecutor:70) Object Property Hierarchy and Composition Computation started
2013-10-16 18:57:42,068 INFO  (AbstractReasonerStage:179) Object Property Hierarchy and Composition Computation using 8 workers
2013-10-16 18:57:42,121 INFO  (LoggingStageExecutor:103) Object Property Hierarchy and Composition Computation finished in 55 ms
2013-10-16 18:57:42,121 INFO  (LoggingStageExecutor:70) Context Initialization started
2013-10-16 18:57:42,122 INFO  (AbstractReasonerStage:179) Context Initialization using 8 workers
2013-10-16 18:57:42,122 INFO  (LoggingStageExecutor:103) Context Initialization finished in 0 ms
2013-10-16 18:57:42,124 INFO  (LoggingStageExecutor:70) Consistency Checking started
2013-10-16 18:57:42,128 INFO  (AbstractReasonerStage:179) Consistency Checking using 8 workers
2013-10-16 18:57:42,163 INFO  (LoggingStageExecutor:103) Consistency Checking finished in 39 ms
2013-10-16 18:57:42,163 INFO  (LoggingStageExecutor:70) Class Taxonomy Computation started
2013-10-16 18:57:42,169 INFO  (AbstractReasonerStage:179) Class Taxonomy Computation using 8 workers
2013-10-16 18:57:43,928 INFO  (LoggingStageExecutor:103) Class Taxonomy Computation finished in 1764 ms
2013-10-16 18:57:43,928 INFO  (LoggingStageExecutor:70) Instance Taxonomy Computation started
2013-10-16 18:57:43,944 INFO  (InstanceTaxonomyComputationStage:71) Instance Taxonomy Computation using 8 workers
2013-10-16 18:57:43,944 INFO  (AbstractReasonerStage:179) Instance Taxonomy Computation using 8 workers
2013-10-16 18:57:43,954 INFO  (LoggingStageExecutor:103) Instance Taxonomy Computation finished in 25 ms
2013-10-16 18:57:43,958 INFO  (MinimalModelGenerator:962) Supers for <http://purl.obolibrary.org/obo/GO_0038092-proto> is 29
2013-10-16 18:57:43,958 INFO  (MinimalModelGenerator:970) Supers in QMAP for <http://purl.obolibrary.org/obo/GO_0038092-proto> is 10
2013-10-16 18:57:43,959 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002224> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/GO_0004872> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/GO_0005886>) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002224> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/GO_0005488> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/GO_0005615>)))))
2013-10-16 18:57:43,961 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:43,961 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:43,962 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:43,964 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:43,964 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:43,968 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 4 ms
2013-10-16 18:57:43,969 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:43,970 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:43,974 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 5 ms
2013-10-16 18:57:43,975 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:43,976 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:43,984 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 8 ms
2013-10-16 18:57:43,984 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:43,986 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:43,988 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 3 ms
2013-10-16 18:57:43,988 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:43,989 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,170 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 181 ms
2013-10-16 18:57:44,170 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,170 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,175 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 4 ms
2013-10-16 18:57:44,175 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,176 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,177 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 2 ms
2013-10-16 18:57:44,178 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,178 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,205 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 27 ms
2013-10-16 18:57:44,205 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,206 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,211 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 5 ms
2013-10-16 18:57:44,211 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,211 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,212 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,212 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,212 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,214 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 1 ms
2013-10-16 18:57:44,214 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,215 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,215 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,215 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,215 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,217 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 1 ms
2013-10-16 18:57:44,217 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,217 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,220 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 3 ms
2013-10-16 18:57:44,220 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,220 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,221 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:44,221 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,221 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,224 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 3 ms
2013-10-16 18:57:44,224 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,224 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,224 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,224 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,225 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,252 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 27 ms
2013-10-16 18:57:44,253 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,253 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,256 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 3 ms
2013-10-16 18:57:44,257 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,257 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,257 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,258 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,258 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,260 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 1 ms
2013-10-16 18:57:44,260 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,260 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,313 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 53 ms
2013-10-16 18:57:44,319 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,320 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,323 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 3 ms
2013-10-16 18:57:44,323 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,324 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,329 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 5 ms
2013-10-16 18:57:44,329 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,329 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,329 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:44,329 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,330 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,333 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 3 ms
2013-10-16 18:57:44,333 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,333 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,335 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 2 ms
2013-10-16 18:57:44,335 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,335 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,347 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 11 ms
2013-10-16 18:57:44,347 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,347 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,348 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,348 INFO  (MinimalModelGenerator:389) GNI type:ObjectIntersectionOf(<http://purl.obolibrary.org/obo/GO_0004872> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/GO_0005886>) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002224> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/GO_0005488> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/GO_0005615>)))) // src=<http://purl.obolibrary.org/obo/GO_0038092-proto> via <http://purl.obolibrary.org/obo/RO_0002224>
2013-10-16 18:57:44,348 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(<http://purl.obolibrary.org/obo/GO_0004872> <http://purl.obolibrary.org/obo/GO_0004872-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 1 Logical Axioms: 1]
2013-10-16 18:57:44,349 INFO  (MinimalModelGenerator:436)  I:<http://purl.obolibrary.org/obo/GO_0004872-proto>
2013-10-16 18:57:44,350 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/RO_0002223> <http://purl.obolibrary.org/obo/GO_0004872-proto> <http://purl.obolibrary.org/obo/GO_0038092-proto>
2013-10-16 18:57:44,350 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002224> <http://purl.obolibrary.org/obo/GO_0038092-proto> <http://purl.obolibrary.org/obo/GO_0004872-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002223> <http://purl.obolibrary.org/obo/GO_0004872-proto> <http://purl.obolibrary.org/obo/GO_0038092-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 2 Logical Axioms: 2]
2013-10-16 18:57:44,350 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,350 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,368 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 17 ms
2013-10-16 18:57:44,368 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,368 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,370 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 1 ms
2013-10-16 18:57:44,370 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,370 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,371 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,371 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,371 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,373 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 1 ms
2013-10-16 18:57:44,373 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,373 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,375 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 2 ms
2013-10-16 18:57:44,375 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,375 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,391 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 15 ms
2013-10-16 18:57:44,391 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,391 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,392 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,392 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,392 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,392 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,393 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,393 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,403 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 10 ms
2013-10-16 18:57:44,403 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,403 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,408 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 4 ms
2013-10-16 18:57:44,408 INFO  (LoggingStageExecutor:70) Incremental Instance Taxonomy Computation started
2013-10-16 18:57:44,409 INFO  (AbstractReasonerStage:179) Incremental Instance Taxonomy Computation using 8 workers
2013-10-16 18:57:44,413 INFO  (LoggingStageExecutor:103) Incremental Instance Taxonomy Computation finished in 4 ms
2013-10-16 18:57:44,413 INFO  (MinimalModelGenerator:962) Supers for <http://purl.obolibrary.org/obo/GO_0004872-proto> is 5
2013-10-16 18:57:44,413 INFO  (MinimalModelGenerator:970) Supers in QMAP for <http://purl.obolibrary.org/obo/GO_0004872-proto> is 0
2013-10-16 18:57:44,414 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002224> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/GO_0005488> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/GO_0005615>)))
2013-10-16 18:57:44,414 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,414 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,414 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,414 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,414 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,416 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 1 ms
2013-10-16 18:57:44,416 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,416 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,417 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,417 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,417 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,417 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,418 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,418 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,422 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 4 ms
2013-10-16 18:57:44,422 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,422 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,436 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 14 ms
2013-10-16 18:57:44,437 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,437 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,441 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 4 ms
2013-10-16 18:57:44,441 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,441 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,441 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,441 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,442 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,452 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 10 ms
2013-10-16 18:57:44,452 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,452 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,456 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 3 ms
2013-10-16 18:57:44,457 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,457 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,457 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,457 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,457 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,460 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 3 ms
2013-10-16 18:57:44,461 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,461 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,461 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,461 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,461 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,463 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 1 ms
2013-10-16 18:57:44,463 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,463 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,467 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 3 ms
2013-10-16 18:57:44,467 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,467 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,467 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:44,467 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,467 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,468 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,468 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,468 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,468 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,468 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,468 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,476 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:44,477 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,477 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,477 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,477 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,477 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,478 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,478 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,478 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,478 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,478 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,478 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,492 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 13 ms
2013-10-16 18:57:44,498 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,499 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,499 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,499 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,499 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,499 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,500 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,500 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,500 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:44,500 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,500 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,500 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,500 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,501 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,501 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,501 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,501 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,509 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:44,510 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,510 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,510 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,510 INFO  (MinimalModelGenerator:389) GNI type:ObjectIntersectionOf(<http://purl.obolibrary.org/obo/GO_0005488> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/GO_0005615>)) // src=<http://purl.obolibrary.org/obo/GO_0004872-proto> via <http://purl.obolibrary.org/obo/RO_0002224>
2013-10-16 18:57:44,511 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(<http://purl.obolibrary.org/obo/GO_0005488> <http://purl.obolibrary.org/obo/GO_0005488-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 4 Logical Axioms: 4]
2013-10-16 18:57:44,511 INFO  (MinimalModelGenerator:436)  I:<http://purl.obolibrary.org/obo/GO_0005488-proto>
2013-10-16 18:57:44,511 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/RO_0002223> <http://purl.obolibrary.org/obo/GO_0005488-proto> <http://purl.obolibrary.org/obo/GO_0004872-proto>
2013-10-16 18:57:44,511 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002224> <http://purl.obolibrary.org/obo/GO_0004872-proto> <http://purl.obolibrary.org/obo/GO_0005488-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002223> <http://purl.obolibrary.org/obo/GO_0005488-proto> <http://purl.obolibrary.org/obo/GO_0004872-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 5 Logical Axioms: 5]
2013-10-16 18:57:44,511 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,511 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,516 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 5 ms
2013-10-16 18:57:44,517 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,517 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,517 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,517 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,517 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,518 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,518 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,518 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,518 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,518 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,518 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,519 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,519 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,519 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,530 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 10 ms
2013-10-16 18:57:44,530 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,530 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,531 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,531 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,531 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,532 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 1 ms
2013-10-16 18:57:44,532 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,533 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,541 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:44,541 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,541 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,541 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,541 INFO  (LoggingStageExecutor:70) Incremental Instance Taxonomy Computation started
2013-10-16 18:57:44,542 INFO  (AbstractReasonerStage:179) Incremental Instance Taxonomy Computation using 8 workers
2013-10-16 18:57:44,542 INFO  (LoggingStageExecutor:103) Incremental Instance Taxonomy Computation finished in 0 ms
2013-10-16 18:57:44,542 INFO  (MinimalModelGenerator:962) Supers for <http://purl.obolibrary.org/obo/GO_0005488-proto> is 5
2013-10-16 18:57:44,542 INFO  (MinimalModelGenerator:970) Supers in QMAP for <http://purl.obolibrary.org/obo/GO_0005488-proto> is 0
2013-10-16 18:57:44,542 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/GO_0005615>)
2013-10-16 18:57:44,542 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,542 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,543 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,543 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,543 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,543 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,543 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,543 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,544 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,544 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,544 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,544 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,544 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,544 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,545 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,545 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,545 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,554 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 9 ms
2013-10-16 18:57:44,554 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,554 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,555 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,555 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,555 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,555 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,555 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,555 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,563 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:44,564 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,564 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,564 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,564 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,564 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,565 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,565 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,565 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,565 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,565 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,565 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,565 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,566 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,566 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,566 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,566 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,566 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,566 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,566 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,567 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,567 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:44,567 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,567 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,567 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,567 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,567 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,568 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,568 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,568 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,576 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:44,576 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,576 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,576 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,577 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,577 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,577 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,577 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,577 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,577 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,578 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,578 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,583 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 4 ms
2013-10-16 18:57:44,589 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,589 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,589 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,589 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,590 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,590 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,590 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,590 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,590 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:44,590 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,590 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,591 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,591 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,591 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,591 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,591 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,591 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,600 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:44,600 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,600 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,600 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,600 INFO  (MinimalModelGenerator:389) GNI type:<http://purl.obolibrary.org/obo/GO_0005615> // src=<http://purl.obolibrary.org/obo/GO_0005488-proto> via <http://purl.obolibrary.org/obo/BFO_0000066>
2013-10-16 18:57:44,601 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(<http://purl.obolibrary.org/obo/GO_0005615> <http://purl.obolibrary.org/obo/GO_0005615-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 7 Logical Axioms: 7]
2013-10-16 18:57:44,601 INFO  (MinimalModelGenerator:436)  I:<http://purl.obolibrary.org/obo/GO_0005615-proto>
2013-10-16 18:57:44,601 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/BFO_0000067> <http://purl.obolibrary.org/obo/GO_0005615-proto> <http://purl.obolibrary.org/obo/GO_0005488-proto>
2013-10-16 18:57:44,601 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/GO_0005488-proto> <http://purl.obolibrary.org/obo/GO_0005615-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000067> <http://purl.obolibrary.org/obo/GO_0005615-proto> <http://purl.obolibrary.org/obo/GO_0005488-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 8 Logical Axioms: 8]
2013-10-16 18:57:44,601 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,601 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,606 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 4 ms
2013-10-16 18:57:44,606 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,606 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,607 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,607 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,607 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,607 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,607 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,607 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,608 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,608 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,608 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,608 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,608 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,608 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,614 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 5 ms
2013-10-16 18:57:44,614 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,614 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,614 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,615 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,615 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,615 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,615 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,615 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,623 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:44,623 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,624 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,624 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,624 INFO  (LoggingStageExecutor:70) Incremental Instance Taxonomy Computation started
2013-10-16 18:57:44,624 INFO  (AbstractReasonerStage:179) Incremental Instance Taxonomy Computation using 8 workers
2013-10-16 18:57:44,624 INFO  (LoggingStageExecutor:103) Incremental Instance Taxonomy Computation finished in 0 ms
2013-10-16 18:57:44,624 INFO  (MinimalModelGenerator:962) Supers for <http://purl.obolibrary.org/obo/GO_0005615-proto> is 5
2013-10-16 18:57:44,625 INFO  (MinimalModelGenerator:970) Supers in QMAP for <http://purl.obolibrary.org/obo/GO_0005615-proto> is 1
2013-10-16 18:57:44,625 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/GO_0005576>)
2013-10-16 18:57:44,625 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,625 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,625 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,626 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,626 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,626 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,626 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,626 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,626 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,626 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,626 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,627 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,627 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,627 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,627 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,627 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,627 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,633 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 5 ms
2013-10-16 18:57:44,633 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,633 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,634 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,634 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,634 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,634 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,634 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,634 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,645 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 10 ms
2013-10-16 18:57:44,645 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,645 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,645 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,645 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,645 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,646 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,646 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,646 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,646 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,646 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,646 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,647 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,647 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,647 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,647 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,647 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,647 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,648 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,648 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,648 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,648 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:44,648 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,648 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,648 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,648 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,649 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,649 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,649 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,649 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,657 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 7 ms
2013-10-16 18:57:44,657 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,657 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,657 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,658 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,658 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,658 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,658 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,658 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,658 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,658 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,659 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,665 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 6 ms
2013-10-16 18:57:44,672 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,672 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,673 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,673 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,673 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,673 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,673 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,673 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,674 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:44,674 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,674 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,674 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,674 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,674 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,674 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,674 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,675 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,683 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:44,683 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,683 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,684 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,684 INFO  (MinimalModelGenerator:389) GNI type:<http://purl.obolibrary.org/obo/GO_0005576> // src=<http://purl.obolibrary.org/obo/GO_0005615-proto> via <http://purl.obolibrary.org/obo/BFO_0000050>
2013-10-16 18:57:44,684 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(<http://purl.obolibrary.org/obo/GO_0005576> <http://purl.obolibrary.org/obo/GO_0005576-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 10 Logical Axioms: 10]
2013-10-16 18:57:44,684 INFO  (MinimalModelGenerator:436)  I:<http://purl.obolibrary.org/obo/GO_0005576-proto>
2013-10-16 18:57:44,684 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0005576-proto> <http://purl.obolibrary.org/obo/GO_0005615-proto>
2013-10-16 18:57:44,685 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/GO_0005615-proto> <http://purl.obolibrary.org/obo/GO_0005576-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0005576-proto> <http://purl.obolibrary.org/obo/GO_0005615-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 11 Logical Axioms: 11]
2013-10-16 18:57:44,685 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,685 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,690 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 4 ms
2013-10-16 18:57:44,690 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,690 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,690 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,690 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,690 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,691 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,691 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,691 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,691 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,691 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,691 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,691 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,691 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,692 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,696 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:44,696 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,696 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,696 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,696 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,696 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,697 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,697 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,697 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,705 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:44,705 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,705 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,706 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,706 INFO  (LoggingStageExecutor:70) Incremental Instance Taxonomy Computation started
2013-10-16 18:57:44,706 INFO  (AbstractReasonerStage:179) Incremental Instance Taxonomy Computation using 8 workers
2013-10-16 18:57:44,706 INFO  (LoggingStageExecutor:103) Incremental Instance Taxonomy Computation finished in 0 ms
2013-10-16 18:57:44,706 INFO  (MinimalModelGenerator:962) Supers for <http://purl.obolibrary.org/obo/GO_0005576-proto> is 3
2013-10-16 18:57:44,706 INFO  (MinimalModelGenerator:970) Supers in QMAP for <http://purl.obolibrary.org/obo/GO_0005576-proto> is 0
2013-10-16 18:57:44,706 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/GO_0005886>)
2013-10-16 18:57:44,706 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,707 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,707 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,707 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,707 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,707 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,707 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,707 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,708 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,708 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,708 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,708 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,708 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,708 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,708 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,708 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,709 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,713 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:44,713 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,713 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,713 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,713 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,713 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,713 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,714 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,714 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,722 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:44,722 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,722 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,722 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,722 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,723 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,723 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,723 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,723 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,723 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,723 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,724 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,724 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,724 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,724 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,724 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,724 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,724 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,724 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,725 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,725 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,725 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:44,725 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,725 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,725 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,725 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,725 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,726 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,726 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,726 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,734 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 7 ms
2013-10-16 18:57:44,734 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,734 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,734 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,734 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,734 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,734 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,735 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,735 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,735 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,735 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,735 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,739 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 4 ms
2013-10-16 18:57:44,746 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,746 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,746 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,746 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,746 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,747 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,747 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,747 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,747 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:44,747 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,747 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,747 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,748 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,748 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,748 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,748 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,748 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,756 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:44,756 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,757 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,757 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,757 INFO  (MinimalModelGenerator:389) GNI type:<http://purl.obolibrary.org/obo/GO_0005886> // src=<http://purl.obolibrary.org/obo/GO_0004872-proto> via <http://purl.obolibrary.org/obo/BFO_0000066>
2013-10-16 18:57:44,757 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(<http://purl.obolibrary.org/obo/GO_0005886> <http://purl.obolibrary.org/obo/GO_0005886-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 13 Logical Axioms: 13]
2013-10-16 18:57:44,757 INFO  (MinimalModelGenerator:436)  I:<http://purl.obolibrary.org/obo/GO_0005886-proto>
2013-10-16 18:57:44,758 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/BFO_0000067> <http://purl.obolibrary.org/obo/GO_0005886-proto> <http://purl.obolibrary.org/obo/GO_0004872-proto>
2013-10-16 18:57:44,758 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/GO_0004872-proto> <http://purl.obolibrary.org/obo/GO_0005886-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000067> <http://purl.obolibrary.org/obo/GO_0005886-proto> <http://purl.obolibrary.org/obo/GO_0004872-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 14 Logical Axioms: 14]
2013-10-16 18:57:44,758 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,758 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,763 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 4 ms
2013-10-16 18:57:44,763 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,763 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,763 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,763 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,764 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,764 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,764 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,764 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,764 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,764 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,764 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,765 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,765 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,765 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,769 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:44,769 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,769 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,770 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,770 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,770 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,770 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,770 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,770 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,779 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:44,779 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,779 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,779 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,779 INFO  (LoggingStageExecutor:70) Incremental Instance Taxonomy Computation started
2013-10-16 18:57:44,779 INFO  (AbstractReasonerStage:179) Incremental Instance Taxonomy Computation using 8 workers
2013-10-16 18:57:44,780 INFO  (LoggingStageExecutor:103) Incremental Instance Taxonomy Computation finished in 0 ms
2013-10-16 18:57:44,780 INFO  (MinimalModelGenerator:962) Supers for <http://purl.obolibrary.org/obo/GO_0005886-proto> is 14
2013-10-16 18:57:44,780 INFO  (MinimalModelGenerator:970) Supers in QMAP for <http://purl.obolibrary.org/obo/GO_0005886-proto> is 2
2013-10-16 18:57:44,780 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/GO_0071944>)
2013-10-16 18:57:44,780 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,780 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,781 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,781 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,781 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,781 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,781 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,781 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,782 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,782 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,782 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,782 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,782 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,782 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,783 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,783 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,783 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,787 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:44,787 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,787 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,787 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,787 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,788 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,788 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,788 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,788 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,796 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:44,796 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,796 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,797 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,797 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,797 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,797 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,797 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,797 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,798 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,798 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,798 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,798 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,798 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,798 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,799 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,799 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,799 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,799 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,799 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,799 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,799 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:44,799 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,799 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,800 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,800 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,800 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,800 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,800 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,800 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,808 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 7 ms
2013-10-16 18:57:44,808 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,808 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,809 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,809 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,809 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,809 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,809 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,809 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,810 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,810 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,810 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,814 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 4 ms
2013-10-16 18:57:44,820 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,821 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,821 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,821 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,821 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,821 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,821 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,822 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,822 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:44,822 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,822 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,822 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,822 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,822 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,823 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,823 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,823 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,831 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:44,831 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,831 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,832 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,832 INFO  (MinimalModelGenerator:389) GNI type:<http://purl.obolibrary.org/obo/GO_0071944> // src=<http://purl.obolibrary.org/obo/GO_0005886-proto> via <http://purl.obolibrary.org/obo/BFO_0000050>
2013-10-16 18:57:44,832 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(<http://purl.obolibrary.org/obo/GO_0071944> <http://purl.obolibrary.org/obo/GO_0071944-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 16 Logical Axioms: 16]
2013-10-16 18:57:44,832 INFO  (MinimalModelGenerator:436)  I:<http://purl.obolibrary.org/obo/GO_0071944-proto>
2013-10-16 18:57:44,832 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0071944-proto> <http://purl.obolibrary.org/obo/GO_0005886-proto>
2013-10-16 18:57:44,833 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0071944-proto> <http://purl.obolibrary.org/obo/GO_0005886-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/GO_0005886-proto> <http://purl.obolibrary.org/obo/GO_0071944-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 17 Logical Axioms: 17]
2013-10-16 18:57:44,833 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,833 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,838 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 4 ms
2013-10-16 18:57:44,838 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,838 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,838 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,838 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,839 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,839 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,839 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,839 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,839 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,839 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,839 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,840 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,840 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,840 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,844 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:44,845 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,845 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,845 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,845 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,845 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,845 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,846 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,846 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,854 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 7 ms
2013-10-16 18:57:44,854 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,854 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,854 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,854 INFO  (LoggingStageExecutor:70) Incremental Instance Taxonomy Computation started
2013-10-16 18:57:44,854 INFO  (AbstractReasonerStage:179) Incremental Instance Taxonomy Computation using 8 workers
2013-10-16 18:57:44,855 INFO  (LoggingStageExecutor:103) Incremental Instance Taxonomy Computation finished in 0 ms
2013-10-16 18:57:44,855 INFO  (MinimalModelGenerator:962) Supers for <http://purl.obolibrary.org/obo/GO_0071944-proto> is 13
2013-10-16 18:57:44,855 INFO  (MinimalModelGenerator:970) Supers in QMAP for <http://purl.obolibrary.org/obo/GO_0071944-proto> is 2
2013-10-16 18:57:44,855 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0005886>)
2013-10-16 18:57:44,855 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,855 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,856 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,856 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,856 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,856 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,856 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,856 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,856 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,857 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,857 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,857 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,857 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,857 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,857 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,857 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,857 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,862 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:44,862 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,862 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,862 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,862 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,862 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,862 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,869 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,869 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,877 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 7 ms
2013-10-16 18:57:44,877 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,877 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,878 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,878 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,878 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,878 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,878 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,878 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,879 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,879 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,879 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,879 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:44,879 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,879 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:44,879 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:44,879 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:44,880 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:44,880 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:44,880 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:44,880 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:44,880 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:44,880 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:44,880 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:44,880 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:44,881 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:44,881 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:44,881 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:44,881 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:44,881 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:44,889 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 7 ms
2013-10-16 18:57:44,889 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:44,889 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:44,889 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:44,890 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:44,890 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:44,890 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:44,890 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:44,890 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:44,890 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:44,890 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:44,890 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:44,894 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 3 ms
2013-10-16 18:57:44,901 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:44,901 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,018 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 116 ms
2013-10-16 18:57:45,018 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,018 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,111 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 93 ms
2013-10-16 18:57:45,111 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,111 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,111 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:45,112 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,112 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,218 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 106 ms
2013-10-16 18:57:45,219 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,219 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,249 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 30 ms
2013-10-16 18:57:45,249 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,249 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,258 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,258 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,258 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,279 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 21 ms
2013-10-16 18:57:45,280 INFO  (MinimalModelGenerator:389) GNI type:<http://purl.obolibrary.org/obo/GO_0005886> // src=<http://purl.obolibrary.org/obo/GO_0071944-proto> via <http://purl.obolibrary.org/obo/BFO_0000051>
2013-10-16 18:57:45,280 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/GO_0005886-proto> <http://purl.obolibrary.org/obo/GO_0071944-proto>
2013-10-16 18:57:45,280 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0071944-proto> <http://purl.obolibrary.org/obo/GO_0005886-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/GO_0005886-proto> <http://purl.obolibrary.org/obo/GO_0071944-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 19 Logical Axioms: 19]
2013-10-16 18:57:45,280 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/GO_0005623>)
2013-10-16 18:57:45,280 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,281 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,286 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 5 ms
2013-10-16 18:57:45,286 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,286 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,286 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,286 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,286 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,287 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,287 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,287 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,287 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,287 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,287 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,288 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,288 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,288 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,292 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:45,292 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,292 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,293 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,293 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,293 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,293 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,293 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,293 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,302 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,302 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,302 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,302 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,302 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,302 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,303 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,303 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,303 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,303 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,303 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,303 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,303 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,304 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,304 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,304 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,304 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,304 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,304 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,304 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,304 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,305 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:45,305 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,305 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,305 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,305 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,305 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,306 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,306 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,306 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,314 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,314 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,314 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,315 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,315 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,315 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,315 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,315 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,315 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,315 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,316 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,316 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,319 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 3 ms
2013-10-16 18:57:45,326 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,326 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,327 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,327 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,327 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,327 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,327 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,327 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,327 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:45,328 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,328 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,328 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,328 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,328 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,329 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,329 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,329 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,337 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,337 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,337 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,338 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,338 INFO  (MinimalModelGenerator:389) GNI type:<http://purl.obolibrary.org/obo/GO_0005623> // src=<http://purl.obolibrary.org/obo/GO_0071944-proto> via <http://purl.obolibrary.org/obo/BFO_0000050>
2013-10-16 18:57:45,338 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(<http://purl.obolibrary.org/obo/GO_0005623> <http://purl.obolibrary.org/obo/GO_0005623-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 19 Logical Axioms: 19]
2013-10-16 18:57:45,338 INFO  (MinimalModelGenerator:436)  I:<http://purl.obolibrary.org/obo/GO_0005623-proto>
2013-10-16 18:57:45,338 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0005623-proto> <http://purl.obolibrary.org/obo/GO_0071944-proto>
2013-10-16 18:57:45,339 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0005623-proto> <http://purl.obolibrary.org/obo/GO_0071944-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/GO_0071944-proto> <http://purl.obolibrary.org/obo/GO_0005623-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 20 Logical Axioms: 20]
2013-10-16 18:57:45,339 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,339 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,344 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 5 ms
2013-10-16 18:57:45,344 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,344 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,344 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,345 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,345 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,345 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,345 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,345 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,345 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,345 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,346 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,346 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,346 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,346 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,350 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:45,350 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,350 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,351 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,351 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,351 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,351 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,351 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,351 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,359 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,360 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,360 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,360 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,360 INFO  (LoggingStageExecutor:70) Incremental Instance Taxonomy Computation started
2013-10-16 18:57:45,360 INFO  (AbstractReasonerStage:179) Incremental Instance Taxonomy Computation using 8 workers
2013-10-16 18:57:45,361 INFO  (LoggingStageExecutor:103) Incremental Instance Taxonomy Computation finished in 0 ms
2013-10-16 18:57:45,361 INFO  (MinimalModelGenerator:962) Supers for <http://purl.obolibrary.org/obo/GO_0005623-proto> is 4
2013-10-16 18:57:45,361 INFO  (MinimalModelGenerator:970) Supers in QMAP for <http://purl.obolibrary.org/obo/GO_0005623-proto> is 1
2013-10-16 18:57:45,361 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0005886>)
2013-10-16 18:57:45,362 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,362 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,362 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,362 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,362 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,362 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,363 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,363 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,363 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,363 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,363 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,363 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,363 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,364 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,364 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,364 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,364 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,368 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 3 ms
2013-10-16 18:57:45,368 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,368 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,369 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,369 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,369 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,372 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 2 ms
2013-10-16 18:57:45,372 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,372 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,380 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,380 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,380 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,381 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,381 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,381 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,381 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,381 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,381 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,382 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,382 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,382 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,382 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,382 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,382 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,383 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,383 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,383 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,383 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,383 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,383 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,383 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:45,383 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,383 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,384 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,384 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,384 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,384 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,384 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,384 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,395 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 10 ms
2013-10-16 18:57:45,395 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,395 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,395 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,395 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,395 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,396 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,396 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,396 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,396 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,396 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,396 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,400 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 3 ms
2013-10-16 18:57:45,408 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,409 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,472 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 63 ms
2013-10-16 18:57:45,472 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,472 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,515 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 42 ms
2013-10-16 18:57:45,515 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,515 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,515 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:45,515 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,515 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,539 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 23 ms
2013-10-16 18:57:45,540 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,540 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,562 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 21 ms
2013-10-16 18:57:45,562 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,562 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,570 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,571 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,571 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,592 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 21 ms
2013-10-16 18:57:45,592 INFO  (MinimalModelGenerator:389) GNI type:<http://purl.obolibrary.org/obo/GO_0005886> // src=<http://purl.obolibrary.org/obo/GO_0005623-proto> via <http://purl.obolibrary.org/obo/BFO_0000051>
2013-10-16 18:57:45,593 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/GO_0005886-proto> <http://purl.obolibrary.org/obo/GO_0005623-proto>
2013-10-16 18:57:45,593 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/GO_0005886-proto> <http://purl.obolibrary.org/obo/GO_0005623-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0005623-proto> <http://purl.obolibrary.org/obo/GO_0005886-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 22 Logical Axioms: 22]
2013-10-16 18:57:45,593 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/GO_0044700>)
2013-10-16 18:57:45,593 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,593 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,598 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 5 ms
2013-10-16 18:57:45,598 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,598 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,599 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,599 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,599 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,599 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,599 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,600 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,600 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,600 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,600 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,600 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,600 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,600 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,605 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:45,605 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,605 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,605 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,605 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,605 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,605 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,606 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,606 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,616 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 9 ms
2013-10-16 18:57:45,616 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,616 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,616 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,616 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,616 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,617 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,617 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,617 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,617 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,617 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,617 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,617 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,618 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,618 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,618 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,618 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,618 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,618 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,618 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,618 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,619 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:45,619 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,619 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,619 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,619 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,619 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,619 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,619 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,620 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,630 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 10 ms
2013-10-16 18:57:45,630 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,630 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,630 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,631 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,631 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,631 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,631 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,631 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,631 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,631 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,631 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,635 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 3 ms
2013-10-16 18:57:45,642 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,642 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,642 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,642 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,642 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,643 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,643 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,643 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,643 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:45,643 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,643 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,644 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,644 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,644 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,644 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,644 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,644 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,653 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,653 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,653 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,653 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,653 INFO  (MinimalModelGenerator:389) GNI type:<http://purl.obolibrary.org/obo/GO_0044700> // src=<http://purl.obolibrary.org/obo/GO_0038092-proto> via <http://purl.obolibrary.org/obo/BFO_0000050>
2013-10-16 18:57:45,654 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(<http://purl.obolibrary.org/obo/GO_0044700> <http://purl.obolibrary.org/obo/GO_0044700-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 24 Logical Axioms: 24]
2013-10-16 18:57:45,654 INFO  (MinimalModelGenerator:436)  I:<http://purl.obolibrary.org/obo/GO_0044700-proto>
2013-10-16 18:57:45,654 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0044700-proto> <http://purl.obolibrary.org/obo/GO_0038092-proto>
2013-10-16 18:57:45,654 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0044700-proto> <http://purl.obolibrary.org/obo/GO_0038092-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/GO_0038092-proto> <http://purl.obolibrary.org/obo/GO_0044700-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 25 Logical Axioms: 25]
2013-10-16 18:57:45,654 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,654 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,659 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 5 ms
2013-10-16 18:57:45,659 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,660 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,660 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,660 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,660 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,660 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,660 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,660 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,661 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,661 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,661 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,661 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,661 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,661 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,665 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:45,666 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,666 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,666 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,666 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,666 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,666 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,666 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,666 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,675 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,675 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,675 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,675 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,675 INFO  (LoggingStageExecutor:70) Incremental Instance Taxonomy Computation started
2013-10-16 18:57:45,675 INFO  (AbstractReasonerStage:179) Incremental Instance Taxonomy Computation using 8 workers
2013-10-16 18:57:45,676 INFO  (LoggingStageExecutor:103) Incremental Instance Taxonomy Computation finished in 0 ms
2013-10-16 18:57:45,676 INFO  (MinimalModelGenerator:962) Supers for <http://purl.obolibrary.org/obo/GO_0044700-proto> is 5
2013-10-16 18:57:45,676 INFO  (MinimalModelGenerator:970) Supers in QMAP for <http://purl.obolibrary.org/obo/GO_0044700-proto> is 0
2013-10-16 18:57:45,676 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/GO_0007154>)
2013-10-16 18:57:45,676 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,676 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,676 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,677 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,677 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,677 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,677 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,677 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,677 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,677 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,677 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,678 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,678 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,678 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,678 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,678 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,678 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,682 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 3 ms
2013-10-16 18:57:45,682 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,682 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,683 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,683 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,683 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,683 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,683 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,683 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,692 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,692 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,692 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,692 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,692 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,692 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,693 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,693 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,693 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,693 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,693 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,693 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,693 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,694 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,694 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,694 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,694 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,694 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,694 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,694 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,694 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,694 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:45,695 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,695 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,695 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,695 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,695 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,695 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,695 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,695 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,703 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,704 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,704 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,704 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,704 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,704 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,704 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,704 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,705 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,705 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,705 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,705 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,709 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 3 ms
2013-10-16 18:57:45,715 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,716 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,716 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,716 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,716 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,716 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,716 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,716 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,717 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:45,717 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,717 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,717 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,717 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,717 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,717 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,718 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,718 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,726 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,726 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,726 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,726 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,727 INFO  (MinimalModelGenerator:389) GNI type:<http://purl.obolibrary.org/obo/GO_0007154> // src=<http://purl.obolibrary.org/obo/GO_0038092-proto> via <http://purl.obolibrary.org/obo/BFO_0000050>
2013-10-16 18:57:45,727 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(<http://purl.obolibrary.org/obo/GO_0007154> <http://purl.obolibrary.org/obo/GO_0007154-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 27 Logical Axioms: 27]
2013-10-16 18:57:45,727 INFO  (MinimalModelGenerator:436)  I:<http://purl.obolibrary.org/obo/GO_0007154-proto>
2013-10-16 18:57:45,727 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0007154-proto> <http://purl.obolibrary.org/obo/GO_0038092-proto>
2013-10-16 18:57:45,727 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/GO_0038092-proto> <http://purl.obolibrary.org/obo/GO_0007154-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0007154-proto> <http://purl.obolibrary.org/obo/GO_0038092-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 28 Logical Axioms: 28]
2013-10-16 18:57:45,727 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,727 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,732 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 4 ms
2013-10-16 18:57:45,732 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,732 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,733 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,733 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,733 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,733 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,733 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,733 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,734 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,734 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,734 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,734 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,734 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,734 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,739 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:45,739 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,739 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,739 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,739 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,739 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,739 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,740 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,740 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,748 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 7 ms
2013-10-16 18:57:45,748 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,748 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,748 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,748 INFO  (LoggingStageExecutor:70) Incremental Instance Taxonomy Computation started
2013-10-16 18:57:45,748 INFO  (AbstractReasonerStage:179) Incremental Instance Taxonomy Computation using 8 workers
2013-10-16 18:57:45,748 INFO  (LoggingStageExecutor:103) Incremental Instance Taxonomy Computation finished in 0 ms
2013-10-16 18:57:45,749 INFO  (MinimalModelGenerator:962) Supers for <http://purl.obolibrary.org/obo/GO_0007154-proto> is 6
2013-10-16 18:57:45,749 INFO  (MinimalModelGenerator:970) Supers in QMAP for <http://purl.obolibrary.org/obo/GO_0007154-proto> is 0
2013-10-16 18:57:45,749 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002230> <http://purl.obolibrary.org/obo/GO_0050794>)
2013-10-16 18:57:45,749 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,749 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,749 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,749 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,749 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,750 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,750 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,750 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,750 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,750 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,750 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,750 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,750 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,751 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,751 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,751 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,751 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,755 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 3 ms
2013-10-16 18:57:45,755 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,755 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,755 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,755 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,755 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,756 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,756 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,756 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,764 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,764 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,764 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,764 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,765 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,765 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,765 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,765 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,765 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,765 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,765 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,765 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,766 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,766 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,766 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,766 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,766 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,766 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,766 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,766 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,767 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,767 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:45,767 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,767 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,767 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,767 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,767 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,767 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,768 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,768 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,775 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 7 ms
2013-10-16 18:57:45,776 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,776 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,776 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,776 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,776 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,776 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,776 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,776 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,777 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,777 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,777 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,781 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 3 ms
2013-10-16 18:57:45,787 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,787 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,787 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,787 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,787 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,788 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,788 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,788 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,788 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:45,788 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,788 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,788 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,789 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,789 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,789 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,789 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,789 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,797 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,797 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,797 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,798 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,798 INFO  (MinimalModelGenerator:389) GNI type:<http://purl.obolibrary.org/obo/GO_0050794> // src=<http://purl.obolibrary.org/obo/GO_0038092-proto> via <http://purl.obolibrary.org/obo/RO_0002230>
2013-10-16 18:57:45,798 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(<http://purl.obolibrary.org/obo/GO_0050794> <http://purl.obolibrary.org/obo/GO_0050794-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 30 Logical Axioms: 30]
2013-10-16 18:57:45,798 INFO  (MinimalModelGenerator:436)  I:<http://purl.obolibrary.org/obo/GO_0050794-proto>
2013-10-16 18:57:45,798 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/RO_0002229> <http://purl.obolibrary.org/obo/GO_0050794-proto> <http://purl.obolibrary.org/obo/GO_0038092-proto>
2013-10-16 18:57:45,798 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002229> <http://purl.obolibrary.org/obo/GO_0050794-proto> <http://purl.obolibrary.org/obo/GO_0038092-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002230> <http://purl.obolibrary.org/obo/GO_0038092-proto> <http://purl.obolibrary.org/obo/GO_0050794-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 31 Logical Axioms: 31]
2013-10-16 18:57:45,799 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,799 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,804 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 4 ms
2013-10-16 18:57:45,804 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,804 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,804 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,804 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,804 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,805 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,805 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,805 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,805 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,805 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,805 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,805 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,805 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,806 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,814 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 8 ms
2013-10-16 18:57:45,814 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,815 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,815 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,815 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,815 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,815 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,815 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,815 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,823 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,823 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,824 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,824 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,824 INFO  (LoggingStageExecutor:70) Incremental Instance Taxonomy Computation started
2013-10-16 18:57:45,824 INFO  (AbstractReasonerStage:179) Incremental Instance Taxonomy Computation using 8 workers
2013-10-16 18:57:45,824 INFO  (LoggingStageExecutor:103) Incremental Instance Taxonomy Computation finished in 0 ms
2013-10-16 18:57:45,824 INFO  (MinimalModelGenerator:962) Supers for <http://purl.obolibrary.org/obo/GO_0050794-proto> is 10
2013-10-16 18:57:45,825 INFO  (MinimalModelGenerator:970) Supers in QMAP for <http://purl.obolibrary.org/obo/GO_0050794-proto> is 2
2013-10-16 18:57:45,825 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002211> <http://purl.obolibrary.org/obo/GO_0009987>)
2013-10-16 18:57:45,825 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,825 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,825 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,825 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,825 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,825 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,826 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,826 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,826 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,826 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,826 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,826 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,826 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,827 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,827 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,827 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,827 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,831 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:45,831 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,831 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,832 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,832 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,832 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,832 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,832 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,832 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,841 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,841 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,841 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,842 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,842 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,842 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,842 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,842 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,842 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,843 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,843 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,843 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,843 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,843 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,843 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,843 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,843 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,844 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,844 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,844 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,844 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,844 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:45,844 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,844 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,844 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,844 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,845 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,845 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,845 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,845 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,853 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,853 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,854 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,854 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,854 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,854 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,854 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,854 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,854 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,855 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,855 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,855 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,859 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 3 ms
2013-10-16 18:57:45,865 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,865 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,865 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,865 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,865 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,866 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,866 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,866 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,866 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:45,866 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,866 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,866 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,866 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,867 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,867 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,867 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,867 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,875 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,875 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,875 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,876 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,876 INFO  (MinimalModelGenerator:389) GNI type:<http://purl.obolibrary.org/obo/GO_0009987> // src=<http://purl.obolibrary.org/obo/GO_0050794-proto> via <http://purl.obolibrary.org/obo/RO_0002211>
2013-10-16 18:57:45,876 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(<http://purl.obolibrary.org/obo/GO_0009987> <http://purl.obolibrary.org/obo/GO_0009987-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 33 Logical Axioms: 33]
2013-10-16 18:57:45,876 INFO  (MinimalModelGenerator:436)  I:<http://purl.obolibrary.org/obo/GO_0009987-proto>
2013-10-16 18:57:45,876 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/RO_0002334> <http://purl.obolibrary.org/obo/GO_0009987-proto> <http://purl.obolibrary.org/obo/GO_0050794-proto>
2013-10-16 18:57:45,876 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002211> <http://purl.obolibrary.org/obo/GO_0050794-proto> <http://purl.obolibrary.org/obo/GO_0009987-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002334> <http://purl.obolibrary.org/obo/GO_0009987-proto> <http://purl.obolibrary.org/obo/GO_0050794-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 34 Logical Axioms: 34]
2013-10-16 18:57:45,877 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,877 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,882 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 4 ms
2013-10-16 18:57:45,882 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,882 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,882 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,882 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,882 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,883 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,883 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,883 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,883 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,883 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,883 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,883 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,883 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,884 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,888 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:45,888 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,888 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,888 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,888 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,888 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,889 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,889 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,889 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,897 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,897 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,897 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,897 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,897 INFO  (LoggingStageExecutor:70) Incremental Instance Taxonomy Computation started
2013-10-16 18:57:45,897 INFO  (AbstractReasonerStage:179) Incremental Instance Taxonomy Computation using 8 workers
2013-10-16 18:57:45,898 INFO  (LoggingStageExecutor:103) Incremental Instance Taxonomy Computation finished in 0 ms
2013-10-16 18:57:45,898 INFO  (MinimalModelGenerator:962) Supers for <http://purl.obolibrary.org/obo/GO_0009987-proto> is 3
2013-10-16 18:57:45,898 INFO  (MinimalModelGenerator:970) Supers in QMAP for <http://purl.obolibrary.org/obo/GO_0009987-proto> is 0
2013-10-16 18:57:45,898 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002224> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/GO_0004872> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002224> <http://purl.obolibrary.org/obo/GO_0070697>)))
2013-10-16 18:57:45,898 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,898 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,898 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,898 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,899 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,899 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,899 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,899 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,899 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,899 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,899 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,900 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,900 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,900 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,900 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,900 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,900 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,904 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:45,904 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,904 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,905 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,905 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,905 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,905 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,905 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,905 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,914 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,914 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,914 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,914 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,914 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,915 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,915 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,915 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,915 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,915 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,915 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,915 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,916 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,916 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,916 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,916 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,916 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,916 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,916 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,916 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,916 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,917 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:45,917 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,917 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,917 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,917 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,917 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,917 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,917 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,917 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,925 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 7 ms
2013-10-16 18:57:45,926 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,926 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,926 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,926 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,926 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,926 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,926 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,927 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,927 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,927 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,927 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,931 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 4 ms
2013-10-16 18:57:45,937 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,937 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,938 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,938 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,938 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,938 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,938 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,938 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,939 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:45,939 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,939 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,939 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,939 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,939 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,939 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,939 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,940 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,948 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,948 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,948 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,948 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,948 INFO  (MinimalModelGenerator:389) GNI type:ObjectIntersectionOf(<http://purl.obolibrary.org/obo/GO_0004872> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002224> <http://purl.obolibrary.org/obo/GO_0070697>)) // src=<http://purl.obolibrary.org/obo/GO_0038092-proto> via <http://purl.obolibrary.org/obo/RO_0002224>
2013-10-16 18:57:45,948 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(<http://purl.obolibrary.org/obo/GO_0004872> <http://purl.obolibrary.org/obo/GO_0004872-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 36 Logical Axioms: 36]
2013-10-16 18:57:45,949 INFO  (MinimalModelGenerator:436)  I:<http://purl.obolibrary.org/obo/GO_0004872-proto>
2013-10-16 18:57:45,949 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/RO_0002223> <http://purl.obolibrary.org/obo/GO_0004872-proto> <http://purl.obolibrary.org/obo/GO_0038092-proto>
2013-10-16 18:57:45,949 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002224> <http://purl.obolibrary.org/obo/GO_0038092-proto> <http://purl.obolibrary.org/obo/GO_0004872-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002223> <http://purl.obolibrary.org/obo/GO_0004872-proto> <http://purl.obolibrary.org/obo/GO_0038092-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 36 Logical Axioms: 36]
2013-10-16 18:57:45,949 INFO  (LoggingStageExecutor:70) Incremental Instance Taxonomy Computation started
2013-10-16 18:57:45,949 INFO  (AbstractReasonerStage:179) Incremental Instance Taxonomy Computation using 8 workers
2013-10-16 18:57:45,949 INFO  (LoggingStageExecutor:103) Incremental Instance Taxonomy Computation finished in 0 ms
2013-10-16 18:57:45,949 INFO  (MinimalModelGenerator:962) Supers for <http://purl.obolibrary.org/obo/GO_0004872-proto> is 9
2013-10-16 18:57:45,950 INFO  (MinimalModelGenerator:970) Supers in QMAP for <http://purl.obolibrary.org/obo/GO_0004872-proto> is 4
2013-10-16 18:57:45,950 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002224> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/GO_0005488> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/GO_0005615>)))
2013-10-16 18:57:45,950 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,950 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,955 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 4 ms
2013-10-16 18:57:45,955 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,955 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,955 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,956 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,956 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,956 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,956 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,956 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,956 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,956 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,956 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,957 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,957 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,957 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,961 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:45,961 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,961 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,961 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,962 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,962 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,962 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,962 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,962 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,970 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:45,970 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,970 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,971 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,971 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,971 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,971 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,971 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,971 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,972 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,972 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,972 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,972 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:45,972 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,972 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,972 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,972 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,973 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,973 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:45,973 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,973 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,973 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:45,973 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,973 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,973 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,973 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,974 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,974 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,974 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,974 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:45,982 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 7 ms
2013-10-16 18:57:45,982 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:45,982 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:45,982 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:45,982 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:45,982 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:45,983 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:45,983 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:45,983 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:45,983 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:45,983 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:45,983 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:45,987 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 3 ms
2013-10-16 18:57:45,993 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:45,993 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:45,994 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:45,994 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:45,994 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:45,996 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 2 ms
2013-10-16 18:57:45,996 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:45,996 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:45,996 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:45,997 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:45,997 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:45,997 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:45,997 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:45,997 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:45,997 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:45,997 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:45,998 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,006 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:46,006 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,007 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,007 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,007 INFO  (MinimalModelGenerator:389) GNI type:ObjectIntersectionOf(<http://purl.obolibrary.org/obo/GO_0005488> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/GO_0005615>)) // src=<http://purl.obolibrary.org/obo/GO_0004872-proto> via <http://purl.obolibrary.org/obo/RO_0002224>
2013-10-16 18:57:46,007 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(<http://purl.obolibrary.org/obo/GO_0005488> <http://purl.obolibrary.org/obo/GO_0005488-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 36 Logical Axioms: 36]
2013-10-16 18:57:46,007 INFO  (MinimalModelGenerator:436)  I:<http://purl.obolibrary.org/obo/GO_0005488-proto>
2013-10-16 18:57:46,007 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/RO_0002223> <http://purl.obolibrary.org/obo/GO_0005488-proto> <http://purl.obolibrary.org/obo/GO_0004872-proto>
2013-10-16 18:57:46,008 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002224> <http://purl.obolibrary.org/obo/GO_0004872-proto> <http://purl.obolibrary.org/obo/GO_0005488-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002223> <http://purl.obolibrary.org/obo/GO_0005488-proto> <http://purl.obolibrary.org/obo/GO_0004872-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 36 Logical Axioms: 36]
2013-10-16 18:57:46,008 INFO  (LoggingStageExecutor:70) Incremental Instance Taxonomy Computation started
2013-10-16 18:57:46,008 INFO  (AbstractReasonerStage:179) Incremental Instance Taxonomy Computation using 8 workers
2013-10-16 18:57:46,008 INFO  (LoggingStageExecutor:103) Incremental Instance Taxonomy Computation finished in 0 ms
2013-10-16 18:57:46,008 INFO  (MinimalModelGenerator:962) Supers for <http://purl.obolibrary.org/obo/GO_0005488-proto> is 7
2013-10-16 18:57:46,008 INFO  (MinimalModelGenerator:970) Supers in QMAP for <http://purl.obolibrary.org/obo/GO_0005488-proto> is 2
2013-10-16 18:57:46,009 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/GO_0005615>)
2013-10-16 18:57:46,009 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:46,009 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:46,014 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 4 ms
2013-10-16 18:57:46,014 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:46,014 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:46,014 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:46,014 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:46,014 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:46,015 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:46,015 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:46,015 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:46,015 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:46,015 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:46,015 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:46,015 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:46,016 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:46,016 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:46,020 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:46,020 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:46,020 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:46,020 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:46,020 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:46,020 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:46,021 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:46,021 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:46,021 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,030 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:46,030 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,030 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,030 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,030 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:46,030 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:46,031 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:46,031 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:46,031 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:46,031 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:46,031 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:46,031 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:46,032 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:46,032 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:46,032 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:46,032 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:46,032 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:46,032 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:46,032 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:46,032 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:46,033 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:46,033 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:46,033 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:46,033 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:46,033 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:46,033 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:46,033 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:46,033 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:46,033 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:46,034 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,041 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 7 ms
2013-10-16 18:57:46,042 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,042 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,042 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,042 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:46,042 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:46,042 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:46,042 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:46,042 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:46,043 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:46,043 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:46,043 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:46,047 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 3 ms
2013-10-16 18:57:46,053 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:46,053 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:46,054 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:46,054 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:46,054 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:46,056 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 1 ms
2013-10-16 18:57:46,056 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:46,056 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:46,056 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:46,056 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:46,056 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:46,057 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:46,057 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:46,057 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:46,057 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:46,057 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:46,057 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,065 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:46,066 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,066 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,066 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,066 INFO  (MinimalModelGenerator:389) GNI type:<http://purl.obolibrary.org/obo/GO_0005615> // src=<http://purl.obolibrary.org/obo/GO_0005488-proto> via <http://purl.obolibrary.org/obo/BFO_0000066>
2013-10-16 18:57:46,066 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/BFO_0000067> <http://purl.obolibrary.org/obo/GO_0005615-proto> <http://purl.obolibrary.org/obo/GO_0005488-proto>
2013-10-16 18:57:46,066 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/GO_0005488-proto> <http://purl.obolibrary.org/obo/GO_0005615-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000067> <http://purl.obolibrary.org/obo/GO_0005615-proto> <http://purl.obolibrary.org/obo/GO_0005488-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 36 Logical Axioms: 36]
2013-10-16 18:57:46,066 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/GO_0005886>)
2013-10-16 18:57:46,067 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:46,067 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:46,072 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 4 ms
2013-10-16 18:57:46,072 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:46,072 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:46,072 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:46,072 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:46,072 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:46,073 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:46,073 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:46,073 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:46,073 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:46,073 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:46,073 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:46,073 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:46,074 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:46,074 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:46,078 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 3 ms
2013-10-16 18:57:46,078 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:46,078 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:46,078 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:46,078 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:46,078 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:46,079 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:46,079 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:46,079 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,087 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:46,087 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,087 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,087 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,087 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:46,088 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:46,088 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:46,088 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:46,088 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:46,088 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:46,088 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:46,088 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:46,089 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:46,089 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:46,089 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:46,089 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:46,089 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:46,089 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:46,089 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:46,089 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:46,090 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:46,090 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:46,090 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:46,090 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:46,090 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:46,090 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:46,090 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:46,090 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:46,090 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:46,091 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,098 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 7 ms
2013-10-16 18:57:46,098 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,099 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,099 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,099 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:46,099 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:46,099 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:46,099 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:46,099 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:46,100 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:46,100 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:46,100 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:46,104 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 3 ms
2013-10-16 18:57:46,110 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:46,110 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:46,110 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:46,110 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:46,111 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:46,112 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 1 ms
2013-10-16 18:57:46,113 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:46,113 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:46,113 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:46,113 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:46,113 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:46,113 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:46,113 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:46,113 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:46,114 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:46,114 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:46,114 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,122 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:46,122 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,122 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,123 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,123 INFO  (MinimalModelGenerator:389) GNI type:<http://purl.obolibrary.org/obo/GO_0005886> // src=<http://purl.obolibrary.org/obo/GO_0004872-proto> via <http://purl.obolibrary.org/obo/BFO_0000066>
2013-10-16 18:57:46,123 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/BFO_0000067> <http://purl.obolibrary.org/obo/GO_0005886-proto> <http://purl.obolibrary.org/obo/GO_0004872-proto>
2013-10-16 18:57:46,123 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/GO_0004872-proto> <http://purl.obolibrary.org/obo/GO_0005886-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000067> <http://purl.obolibrary.org/obo/GO_0005886-proto> <http://purl.obolibrary.org/obo/GO_0004872-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 36 Logical Axioms: 36]
2013-10-16 18:57:46,123 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002224> <http://purl.obolibrary.org/obo/GO_0070697>)
2013-10-16 18:57:46,124 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:46,124 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:46,129 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 4 ms
2013-10-16 18:57:46,129 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:46,129 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:46,129 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:46,129 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:46,129 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:46,129 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:46,129 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:46,130 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:46,130 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:46,130 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:46,130 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:46,130 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:46,130 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:46,130 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:46,134 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 3 ms
2013-10-16 18:57:46,134 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:46,134 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:46,135 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:46,135 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:46,135 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:46,135 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:46,135 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:46,135 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,143 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:46,143 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,143 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,144 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,144 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:46,144 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:46,144 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:46,144 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:46,144 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:46,145 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:46,145 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:46,145 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:46,145 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:46,145 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:46,145 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:46,145 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:46,145 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:46,145 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:46,146 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:46,146 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:46,146 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:46,146 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:46,146 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:46,146 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:46,146 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:46,146 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:46,147 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:46,147 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:46,147 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:46,147 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,155 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 7 ms
2013-10-16 18:57:46,155 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,155 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,155 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,155 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:46,155 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:46,155 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:46,155 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:46,156 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:46,156 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:46,156 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:46,156 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:46,160 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 4 ms
2013-10-16 18:57:46,166 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:46,166 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:46,167 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:46,167 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:46,167 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:46,167 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:46,173 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:46,173 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:46,173 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:46,173 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:46,174 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:46,174 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:46,174 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:46,174 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:46,174 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:46,174 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:46,174 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,183 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:46,183 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,183 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,183 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,184 INFO  (MinimalModelGenerator:389) GNI type:<http://purl.obolibrary.org/obo/GO_0070697> // src=<http://purl.obolibrary.org/obo/GO_0004872-proto> via <http://purl.obolibrary.org/obo/RO_0002224>
2013-10-16 18:57:46,184 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(<http://purl.obolibrary.org/obo/GO_0070697> <http://purl.obolibrary.org/obo/GO_0070697-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 36 Logical Axioms: 36]
2013-10-16 18:57:46,184 INFO  (MinimalModelGenerator:436)  I:<http://purl.obolibrary.org/obo/GO_0070697-proto>
2013-10-16 18:57:46,184 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/RO_0002223> <http://purl.obolibrary.org/obo/GO_0070697-proto> <http://purl.obolibrary.org/obo/GO_0004872-proto>
2013-10-16 18:57:46,184 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002223> <http://purl.obolibrary.org/obo/GO_0070697-proto> <http://purl.obolibrary.org/obo/GO_0004872-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002224> <http://purl.obolibrary.org/obo/GO_0004872-proto> <http://purl.obolibrary.org/obo/GO_0070697-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 37 Logical Axioms: 37]
2013-10-16 18:57:46,184 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:46,184 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:46,190 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 5 ms
2013-10-16 18:57:46,190 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:46,190 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:46,190 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:46,190 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:46,190 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:46,190 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:46,191 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:46,191 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:46,191 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:46,191 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:46,191 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:46,191 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:46,191 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:46,191 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:46,196 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:46,196 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:46,196 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:46,196 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:46,196 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:46,196 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:46,196 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:46,197 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:46,197 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,205 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 7 ms
2013-10-16 18:57:46,205 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,205 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,205 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,205 INFO  (LoggingStageExecutor:70) Incremental Instance Taxonomy Computation started
2013-10-16 18:57:46,205 INFO  (AbstractReasonerStage:179) Incremental Instance Taxonomy Computation using 8 workers
2013-10-16 18:57:46,206 INFO  (LoggingStageExecutor:103) Incremental Instance Taxonomy Computation finished in 0 ms
2013-10-16 18:57:46,206 INFO  (MinimalModelGenerator:962) Supers for <http://purl.obolibrary.org/obo/GO_0070697-proto> is 12
2013-10-16 18:57:46,206 INFO  (MinimalModelGenerator:970) Supers in QMAP for <http://purl.obolibrary.org/obo/GO_0070697-proto> is 2
2013-10-16 18:57:46,206 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002233> <http://purl.obolibrary.org/obo/PR_000000001>)
2013-10-16 18:57:46,206 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:46,206 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:46,206 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:46,207 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:46,207 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:46,207 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:46,207 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:46,207 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:46,207 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:46,207 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:46,207 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:46,208 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:46,208 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:46,208 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:46,208 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:46,208 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:46,208 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:46,212 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:46,212 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:46,213 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:46,213 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:46,213 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:46,213 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:46,213 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:46,213 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:46,213 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,222 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:46,222 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,222 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,222 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,222 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:46,222 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:46,222 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:46,223 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:46,223 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:46,223 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:46,223 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:46,223 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:46,223 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:46,223 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:46,223 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:46,224 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:46,224 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:46,224 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:46,224 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:46,224 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:46,224 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:46,224 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:46,224 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:46,225 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:46,225 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:46,225 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:46,225 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:46,225 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:46,225 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:46,225 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,233 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 7 ms
2013-10-16 18:57:46,233 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,233 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,234 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,234 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:46,234 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:46,234 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:46,234 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:46,234 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:46,234 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:46,235 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:46,235 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:46,238 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 3 ms
2013-10-16 18:57:46,244 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:46,245 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:46,245 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:46,245 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:46,245 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:46,245 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:46,245 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:46,245 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:46,246 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:46,246 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:46,246 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:46,246 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:46,246 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:46,246 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:46,246 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:46,246 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:46,247 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,255 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:46,255 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,255 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,256 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,256 INFO  (MinimalModelGenerator:389) GNI type:<http://purl.obolibrary.org/obo/PR_000000001> // src=<http://purl.obolibrary.org/obo/GO_0070697-proto> via <http://purl.obolibrary.org/obo/RO_0002233>
2013-10-16 18:57:46,256 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(<http://purl.obolibrary.org/obo/PR_000000001> <http://purl.obolibrary.org/obo/PR_000000001-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 39 Logical Axioms: 39]
2013-10-16 18:57:46,256 INFO  (MinimalModelGenerator:436)  I:<http://purl.obolibrary.org/obo/PR_000000001-proto>
2013-10-16 18:57:46,256 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/RO_0002352> <http://purl.obolibrary.org/obo/PR_000000001-proto> <http://purl.obolibrary.org/obo/GO_0070697-proto>
2013-10-16 18:57:46,256 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002233> <http://purl.obolibrary.org/obo/GO_0070697-proto> <http://purl.obolibrary.org/obo/PR_000000001-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002352> <http://purl.obolibrary.org/obo/PR_000000001-proto> <http://purl.obolibrary.org/obo/GO_0070697-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 40 Logical Axioms: 40]
2013-10-16 18:57:46,256 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:46,256 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:46,261 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 4 ms
2013-10-16 18:57:46,261 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:46,261 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:46,262 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:46,262 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:46,262 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:46,262 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:46,262 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:46,262 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:46,263 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:46,263 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:46,263 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:46,263 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:46,263 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:46,263 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:46,267 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:46,267 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:46,267 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:46,268 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:46,268 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:46,268 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:46,268 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:46,268 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:46,268 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,276 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:46,277 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,277 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,277 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,277 INFO  (LoggingStageExecutor:70) Incremental Instance Taxonomy Computation started
2013-10-16 18:57:46,277 INFO  (AbstractReasonerStage:179) Incremental Instance Taxonomy Computation using 8 workers
2013-10-16 18:57:46,277 INFO  (LoggingStageExecutor:103) Incremental Instance Taxonomy Computation finished in 0 ms
2013-10-16 18:57:46,277 INFO  (MinimalModelGenerator:962) Supers for <http://purl.obolibrary.org/obo/PR_000000001-proto> is 9
2013-10-16 18:57:46,278 INFO  (MinimalModelGenerator:970) Supers in QMAP for <http://purl.obolibrary.org/obo/PR_000000001-proto> is 0
2013-10-16 18:57:46,278 INFO  (MinimalModelGenerator:445)   Rel: ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002233> <http://purl.obolibrary.org/obo/PRO_000003230>)
2013-10-16 18:57:46,278 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:46,278 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:46,278 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:46,278 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:46,278 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:46,278 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:46,278 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:46,279 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:46,279 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:46,279 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:46,279 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:46,279 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:46,279 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:46,279 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:46,279 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:46,280 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:46,280 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:46,284 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 3 ms
2013-10-16 18:57:46,284 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:46,284 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:46,284 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:46,284 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:46,284 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:46,284 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:46,285 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:46,285 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,293 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 7 ms
2013-10-16 18:57:46,293 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,293 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,293 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,293 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:46,293 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:46,294 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:46,294 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:46,294 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:46,294 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:46,294 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:46,294 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:46,294 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:46,294 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:46,295 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:46,295 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:46,295 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:46,295 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:46,295 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:46,295 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:46,295 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:46,296 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:46,296 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:46,296 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:46,296 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:46,296 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:46,296 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:46,296 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:46,296 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:46,296 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,304 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 7 ms
2013-10-16 18:57:46,304 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,304 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,305 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,305 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:46,305 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:46,305 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 0 ms
2013-10-16 18:57:46,305 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:46,305 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:46,305 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:46,305 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:46,306 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:46,309 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 3 ms
2013-10-16 18:57:46,316 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:46,316 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:46,316 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:46,316 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:46,316 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:46,317 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:46,317 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:46,317 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:46,317 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 0 ms
2013-10-16 18:57:46,317 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:46,317 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:46,317 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:46,317 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:46,318 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:46,318 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:46,318 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:46,318 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,327 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:46,327 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,327 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,327 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,328 INFO  (MinimalModelGenerator:389) GNI type:<http://purl.obolibrary.org/obo/PRO_000003230> // src=<http://purl.obolibrary.org/obo/GO_0070697-proto> via <http://purl.obolibrary.org/obo/RO_0002233>
2013-10-16 18:57:46,328 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(<http://purl.obolibrary.org/obo/PRO_000003230> <http://purl.obolibrary.org/obo/PRO_000003230-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 42 Logical Axioms: 42]
2013-10-16 18:57:46,328 INFO  (MinimalModelGenerator:436)  I:<http://purl.obolibrary.org/obo/PRO_000003230-proto>
2013-10-16 18:57:46,328 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/RO_0002352> <http://purl.obolibrary.org/obo/PRO_000003230-proto> <http://purl.obolibrary.org/obo/GO_0070697-proto>
2013-10-16 18:57:46,328 INFO  (MinimalModelGenerator:1200) Adding: [ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002352> <http://purl.obolibrary.org/obo/PRO_000003230-proto> <http://purl.obolibrary.org/obo/GO_0070697-proto>), ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002233> <http://purl.obolibrary.org/obo/GO_0070697-proto> <http://purl.obolibrary.org/obo/PRO_000003230-proto>)] to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 43 Logical Axioms: 43]
2013-10-16 18:57:46,328 INFO  (LoggingStageExecutor:70) Loading of Axioms started
2013-10-16 18:57:46,328 INFO  (AbstractReasonerStage:179) Loading of Axioms using 8 workers
2013-10-16 18:57:46,333 INFO  (LoggingStageExecutor:103) Loading of Axioms finished in 4 ms
2013-10-16 18:57:46,333 INFO  (LoggingStageExecutor:70) Incremental Context Completion started
2013-10-16 18:57:46,333 INFO  (AbstractReasonerStage:179) Incremental Context Completion using 8 workers
2013-10-16 18:57:46,334 INFO  (LoggingStageExecutor:103) Incremental Context Completion finished in 0 ms
2013-10-16 18:57:46,334 INFO  (LoggingStageExecutor:70) Incremental Deletions Initialization started
2013-10-16 18:57:46,334 INFO  (AbstractReasonerStage:179) Incremental Deletions Initialization using 8 workers
2013-10-16 18:57:46,334 INFO  (LoggingStageExecutor:103) Incremental Deletions Initialization finished in 0 ms
2013-10-16 18:57:46,334 INFO  (LoggingStageExecutor:70) Incremental Deletion started
2013-10-16 18:57:46,334 INFO  (AbstractReasonerStage:179) Incremental Deletion using 8 workers
2013-10-16 18:57:46,334 INFO  (LoggingStageExecutor:103) Incremental Deletion finished in 0 ms
2013-10-16 18:57:46,335 INFO  (LoggingStageExecutor:70) Incremental Overdeletion Pruning started
2013-10-16 18:57:46,335 INFO  (AbstractReasonerStage:179) Incremental Overdeletion Pruning using 8 workers
2013-10-16 18:57:46,335 INFO  (LoggingStageExecutor:103) Incremental Overdeletion Pruning finished in 0 ms
2013-10-16 18:57:46,335 INFO  (LoggingStageExecutor:70) Incremental Additions Initialization started
2013-10-16 18:57:46,335 INFO  (AbstractReasonerStage:179) Incremental Additions Initialization using 8 workers
2013-10-16 18:57:46,339 INFO  (LoggingStageExecutor:103) Incremental Additions Initialization finished in 4 ms
2013-10-16 18:57:46,339 INFO  (LoggingStageExecutor:70) Incremental Addition started
2013-10-16 18:57:46,340 INFO  (AbstractReasonerStage:179) Incremental Addition using 8 workers
2013-10-16 18:57:46,340 INFO  (LoggingStageExecutor:103) Incremental Addition finished in 0 ms
2013-10-16 18:57:46,340 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Cleaning started
2013-10-16 18:57:46,340 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Cleaning using 8 workers
2013-10-16 18:57:46,340 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Cleaning finished in 0 ms
2013-10-16 18:57:46,340 INFO  (LoggingStageExecutor:70) Incremental Consistency Checking started
2013-10-16 18:57:46,340 INFO  (AbstractReasonerStage:179) Incremental Consistency Checking using 8 workers
2013-10-16 18:57:46,348 INFO  (LoggingStageExecutor:103) Incremental Consistency Checking finished in 8 ms
2013-10-16 18:57:46,349 INFO  (LoggingStageExecutor:70) Incremental Taxonomy Construction started
2013-10-16 18:57:46,349 INFO  (AbstractReasonerStage:179) Incremental Taxonomy Construction using 8 workers
2013-10-16 18:57:46,349 INFO  (LoggingStageExecutor:103) Incremental Taxonomy Construction finished in 0 ms
2013-10-16 18:57:46,349 INFO  (LoggingStageExecutor:70) Incremental Instance Taxonomy Computation started
2013-10-16 18:57:46,349 INFO  (AbstractReasonerStage:179) Incremental Instance Taxonomy Computation using 8 workers
2013-10-16 18:57:46,349 INFO  (LoggingStageExecutor:103) Incremental Instance Taxonomy Computation finished in 0 ms
2013-10-16 18:57:46,349 INFO  (MinimalModelGenerator:962) Supers for <http://purl.obolibrary.org/obo/PRO_000003230-proto> is 4
2013-10-16 18:57:46,350 INFO  (MinimalModelGenerator:970) Supers in QMAP for <http://purl.obolibrary.org/obo/PRO_000003230-proto> is 0
2013-10-16 18:57:46,350 INFO  (MinimalModelGenerator:604) Collapsing...
2013-10-16 18:57:46,352 INFO  (MinimalModelGenerator:676)        DUAL TARGETS <http://purl.obolibrary.org/obo/GO_0009987-proto> ==> { <http://purl.obolibrary.org/obo/GO_0038092-proto> ==OR== <http://purl.obolibrary.org/obo/GO_0007154-proto> }
2013-10-16 18:57:46,352 INFO  (MinimalModelGenerator:698)   ?collapsing <http://purl.obolibrary.org/obo/GO_0005488-proto> -> <http://purl.obolibrary.org/obo/GO_0070697-proto>
2013-10-16 18:57:46,352 INFO  (MinimalModelGenerator:703)   ACTUALLY collapsing <http://purl.obolibrary.org/obo/GO_0005488-proto> -> <http://purl.obolibrary.org/obo/GO_0070697-proto>
2013-10-16 18:57:46,355 INFO  (MinimalModelGenerator:698)   ?collapsing <http://purl.obolibrary.org/obo/GO_0009987-proto> -> <http://purl.obolibrary.org/obo/GO_0038092-proto>
2013-10-16 18:57:46,355 INFO  (MinimalModelGenerator:700)    **multi-candidate
2013-10-16 18:57:46,355 INFO  (MinimalModelGenerator:698)   ?collapsing <http://purl.obolibrary.org/obo/GO_0050794-proto> -> <http://purl.obolibrary.org/obo/GO_0038092-proto>
2013-10-16 18:57:46,355 INFO  (MinimalModelGenerator:703)   ACTUALLY collapsing <http://purl.obolibrary.org/obo/GO_0050794-proto> -> <http://purl.obolibrary.org/obo/GO_0038092-proto>
2013-10-16 18:57:46,356 INFO  (MinimalModelGenerator:726) REMOVING AMBIGUOUS INDIVIDUAL:ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002211> <http://purl.obolibrary.org/obo/GO_0038092-proto> <http://purl.obolibrary.org/obo/GO_0009987-proto>)
2013-10-16 18:57:46,356 INFO  (MinimalModelGenerator:726) REMOVING AMBIGUOUS INDIVIDUAL:ClassAssertion(<http://purl.obolibrary.org/obo/GO_0009987> <http://purl.obolibrary.org/obo/GO_0009987-proto>)
2013-10-16 18:57:46,356 INFO  (MinimalModelGenerator:726) REMOVING AMBIGUOUS INDIVIDUAL:ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002334> <http://purl.obolibrary.org/obo/GO_0009987-proto> <http://purl.obolibrary.org/obo/GO_0038092-proto>)
2013-10-16 18:57:46,356 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,357 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,357 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,358 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,358 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,359 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,359 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,360 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0005623-proto> <http://purl.obolibrary.org/obo/GO_0005886-proto>
2013-10-16 18:57:46,361 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=2
2013-10-16 18:57:46,361 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,362 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/GO_0005886-proto> <http://purl.obolibrary.org/obo/GO_0005623-proto>
2013-10-16 18:57:46,363 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=2
2013-10-16 18:57:46,363 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,363 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,364 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,365 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/RO_0002229> <http://purl.obolibrary.org/obo/GO_0038092-proto> <http://purl.obolibrary.org/obo/GO_0038092-proto>
2013-10-16 18:57:46,365 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=2
2013-10-16 18:57:46,366 INFO  (MinimalModelGenerator:1173) Including inverse: <http://purl.obolibrary.org/obo/RO_0002223> <http://purl.obolibrary.org/obo/GO_0070697-proto> <http://purl.obolibrary.org/obo/GO_0038092-proto>
2013-10-16 18:57:46,366 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=2
2013-10-16 18:57:46,367 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,367 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,368 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,368 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,369 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,370 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,370 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,370 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,371 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,371 INFO  (MinimalModelGenerator:1361) removing redundant axioms, #=0
2013-10-16 18:57:46,371 INFO  (MinimalModelGenerator:1304) Normalizing: <http://purl.obolibrary.org/obo/BFO_0000066>
2013-10-16 18:57:46,372 INFO  (MinimalModelGenerator:1307) Inverse props: [<http://purl.obolibrary.org/obo/BFO_0000067>]
2013-10-16 18:57:46,372 INFO  (MinimalModelGenerator:1313)   FLIPPING:ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000067> <http://purl.obolibrary.org/obo/GO_0005615-proto> <http://purl.obolibrary.org/obo/GO_0070697-proto>)
2013-10-16 18:57:46,372 INFO  (MinimalModelGenerator:1313)   FLIPPING:ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000067> <http://purl.obolibrary.org/obo/GO_0005886-proto> <http://purl.obolibrary.org/obo/GO_0004872-proto>)
2013-10-16 18:57:46,372 INFO  (MinimalModelGenerator:1304) Normalizing: <http://purl.obolibrary.org/obo/RO_0002223>
2013-10-16 18:57:46,372 INFO  (MinimalModelGenerator:1307) Inverse props: [<http://purl.obolibrary.org/obo/RO_0002224>]
2013-10-16 18:57:46,372 INFO  (MinimalModelGenerator:1313)   FLIPPING:ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002224> <http://purl.obolibrary.org/obo/GO_0038092-proto> <http://purl.obolibrary.org/obo/GO_0004872-proto>)
2013-10-16 18:57:46,372 INFO  (MinimalModelGenerator:1313)   FLIPPING:ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/RO_0002224> <http://purl.obolibrary.org/obo/GO_0004872-proto> <http://purl.obolibrary.org/obo/GO_0070697-proto>)
2013-10-16 18:57:46,372 INFO  (MinimalModelGenerator:1304) Normalizing: <http://purl.obolibrary.org/obo/BFO_0000050>
2013-10-16 18:57:46,372 INFO  (MinimalModelGenerator:1307) Inverse props: [<http://purl.obolibrary.org/obo/BFO_0000051>]
2013-10-16 18:57:46,372 INFO  (MinimalModelGenerator:1313)   FLIPPING:ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0044700-proto> <http://purl.obolibrary.org/obo/GO_0038092-proto>)
2013-10-16 18:57:46,373 INFO  (MinimalModelGenerator:1313)   FLIPPING:ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0071944-proto> <http://purl.obolibrary.org/obo/GO_0005886-proto>)
2013-10-16 18:57:46,373 INFO  (MinimalModelGenerator:1313)   FLIPPING:ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0007154-proto> <http://purl.obolibrary.org/obo/GO_0038092-proto>)
2013-10-16 18:57:46,373 INFO  (MinimalModelGenerator:1313)   FLIPPING:ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0005623-proto> <http://purl.obolibrary.org/obo/GO_0071944-proto>)
2013-10-16 18:57:46,373 INFO  (MinimalModelGenerator:1313)   FLIPPING:ObjectPropertyAssertion(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/GO_0005576-proto> <http://purl.obolibrary.org/obo/GO_0005615-proto>)
2013-10-16 18:57:46,373 INFO  (MinimalModelGenerator:1304) Normalizing: <http://purl.obolibrary.org/obo/RO_0002211>
2013-10-16 18:57:46,373 INFO  (MinimalModelGenerator:1307) Inverse props: [<http://purl.obolibrary.org/obo/RO_0002334>]
2013-10-16 18:57:46,373 INFO  (MinimalModelGenerator:773) SCHEDULING: <http://purl.obolibrary.org/obo/PR_000000001-proto>
2013-10-16 18:57:46,373 INFO  (MinimalModelGenerator:773) SCHEDULING: <http://purl.obolibrary.org/obo/GO_0005615-proto>
2013-10-16 18:57:46,374 INFO  (MinimalModelGenerator:773) SCHEDULING: <http://purl.obolibrary.org/obo/PRO_000003230-proto>
2013-10-16 18:57:46,374 INFO  (MinimalModelGenerator:773) SCHEDULING: <http://purl.obolibrary.org/obo/GO_0005623-proto>
2013-10-16 18:57:46,374 INFO  (MinimalModelGenerator:773) SCHEDULING: <http://purl.obolibrary.org/obo/GO_0071944-proto>
2013-10-16 18:57:46,374 INFO  (MinimalModelGenerator:773) SCHEDULING: <http://purl.obolibrary.org/obo/GO_0005576-proto>
2013-10-16 18:57:46,374 INFO  (MinimalModelGenerator:773) SCHEDULING: <http://purl.obolibrary.org/obo/GO_0005886-proto>
2013-10-16 18:57:46,375 INFO  (MinimalModelGenerator:801) ANONYMIZING:<http://purl.obolibrary.org/obo/PR_000000001-proto>
2013-10-16 18:57:46,375 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002233> <http://purl.obolibrary.org/obo/PR_000000001>) <http://purl.obolibrary.org/obo/GO_0070697-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 27 Logical Axioms: 27]
2013-10-16 18:57:46,375 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002352> <http://purl.obolibrary.org/obo/PR_000000001>) <http://purl.obolibrary.org/obo/PR_000000001-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 28 Logical Axioms: 28]
2013-10-16 18:57:46,375 INFO  (MinimalModelGenerator:801) ANONYMIZING:<http://purl.obolibrary.org/obo/GO_0005615-proto>
2013-10-16 18:57:46,375 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/GO_0005615>) <http://purl.obolibrary.org/obo/GO_0070697-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 25 Logical Axioms: 25]
2013-10-16 18:57:46,375 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/GO_0005615>) <http://purl.obolibrary.org/obo/GO_0005615-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 26 Logical Axioms: 26]
2013-10-16 18:57:46,376 INFO  (MinimalModelGenerator:801) ANONYMIZING:<http://purl.obolibrary.org/obo/PRO_000003230-proto>
2013-10-16 18:57:46,376 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002352> <http://purl.obolibrary.org/obo/PRO_000003230>) <http://purl.obolibrary.org/obo/PRO_000003230-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 23 Logical Axioms: 23]
2013-10-16 18:57:46,376 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002352> <http://purl.obolibrary.org/obo/BFO_0000002>) <http://purl.obolibrary.org/obo/PRO_000003230-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 24 Logical Axioms: 24]
2013-10-16 18:57:46,376 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002233> <http://purl.obolibrary.org/obo/PRO_000003230>) <http://purl.obolibrary.org/obo/GO_0070697-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 25 Logical Axioms: 25]
2013-10-16 18:57:46,376 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002233> <http://purl.obolibrary.org/obo/BFO_0000002>) <http://purl.obolibrary.org/obo/GO_0070697-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 26 Logical Axioms: 26]
2013-10-16 18:57:46,376 INFO  (MinimalModelGenerator:801) ANONYMIZING:<http://purl.obolibrary.org/obo/GO_0005623-proto>
2013-10-16 18:57:46,376 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://x.org/GO_0005886/BFO_0000051>) <http://purl.obolibrary.org/obo/GO_0071944-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 22 Logical Axioms: 22]
2013-10-16 18:57:46,376 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/GO_0005623>) <http://purl.obolibrary.org/obo/GO_0071944-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 23 Logical Axioms: 23]
2013-10-16 18:57:46,377 INFO  (MinimalModelGenerator:801) ANONYMIZING:<http://purl.obolibrary.org/obo/GO_0071944-proto>
2013-10-16 18:57:46,377 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://x.org/GO_0005886/BFO_0000051>) <http://purl.obolibrary.org/obo/GO_0005886-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 22 Logical Axioms: 22]
2013-10-16 18:57:46,377 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/GO_0071944>) <http://purl.obolibrary.org/obo/GO_0005886-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 23 Logical Axioms: 23]
2013-10-16 18:57:46,377 INFO  (MinimalModelGenerator:801) ANONYMIZING:<http://purl.obolibrary.org/obo/GO_0005576-proto>
2013-10-16 18:57:46,377 INFO  (MinimalModelGenerator:801) ANONYMIZING:<http://purl.obolibrary.org/obo/GO_0005886-proto>
2013-10-16 18:57:46,377 INFO  (MinimalModelGenerator:1193) Adding: ClassAssertion(ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000066> <http://purl.obolibrary.org/obo/GO_0005886>) <http://purl.obolibrary.org/obo/GO_0004872-proto>) to Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox>))) [Axioms: 19 Logical Axioms: 19]
saving:http://purl.obolibrary.org/obo/go/extensions/x-signaling.owl__abox