Gene Ontology: Ontology Comparison Report
Files used:
- file 1 (old): go-2011-10-01.obo; date: 30:09:2011 14:21; CVS revision: 1.2291
- file 2 (new): go-2011-10-08.obo; date: 07:10:2011 17:16; CVS revision: 1.2307
New terms
Obsoletions
| ID | name | namespace |
|---|---|---|
| GO:0033747 | versatile peroxidase activity
Replaced by: GO:0004601 Consider: GO:0052750 |
molecular_function |
| GO:0035980 | invasive growth in response to nitrogen limitation
Consider: GO:0007124 This term was made obsolete because the GO term 'pseudohyphal growth ; GO:0007124' describes growth under nitrogen-limiting conditions. |
biological_process |
Term merges
None
Term changes
| File 1 (30:09:2011 14:21, 1.2291) | File 2 (07:10:2011 17:16, 1.2307) |
|---|
| GO:0002061 : pyrimidine base binding | |
|---|---|
|
synonym |
synonym "pyrimidine nucleobase binding" EXACT [CHEBI:26432] |
| GO:0002189 : ribose phosphate diphosphokinase complex | |
|---|---|
|
synonym |
synonym "phosphoribosylpyrophosphate synthetase complex" EXACT [PMID:9348095] "PRPP synthetase complex" EXACT [PMID:9348095] |
| GO:0003836 : beta-galactoside (CMP) alpha-2,3-sialyltransferase activity | |
|---|---|
|
name |
name beta-galactoside (CMP) alpha-2,3-sialyltransferase activity |
| GO:0004559 : alpha-mannosidase activity | |
|---|---|
|
synonym |
synonym "1,2-alpha-D-mannosidase activity" NARROW [EC:3.2.1.24] "1,2-alpha-mannosidase" NARROW [EC:3.2.1.24] "p-nitrophenyl-alpha-mannosidase activity" NARROW [EC:3.2.1.24] |
| GO:0005041 : low-density lipoprotein receptor activity | |
|---|---|
|
synonym |
synonym "LDLR activity" EXACT [GOC:bf] |
| GO:0005183 : gonadotropin hormone-releasing hormone activity | |
|---|---|
| GO:0006497 : protein lipidation | |
|---|---|
|
synonym |
|
| GO:0007271 : synaptic transmission, cholinergic | |
|---|---|
| GO:0008373 : sialyltransferase activity | |
|---|---|
|
def xref |
def Catalysis of the transfer of sialic acid to the terminal portions of the sialylated glycolipids (gangliosides) or to the N- or O-linked sugar chains of glycoproteins. |
| GO:0009025 : tagatose-bisphosphate aldolase activity | |
|---|---|
|
synonym |
|
| GO:0009799 : specification of symmetry | |
|---|---|
|
synonym |
|
| GO:0010017 : red or far-red light signaling pathway | |
|---|---|
|
synonym |
synonym "red or far red light signaling pathway" EXACT [GOC:bf, GOC:tb] "red or far-red light signalling pathway" EXACT [] |
| GO:0010087 : phloem or xylem histogenesis | |
|---|---|
|
synonym |
|
| GO:0014069 : postsynaptic density | |
|---|---|
| GO:0016161 : beta-amylase activity | |
|---|---|
|
def |
def Catalysis of the reaction: (1,4-alpha-D-glucosyl)(n+1) + H2O = (1,4-alpha-D-glucosyl)(n-1) + alpha-maltose. This reaction is the hydrolysis of 1,4-alpha-glucosidic linkages in polysaccharides so as to remove successive maltose units from the non-reducing ends of the chains. |
| GO:0016348 : imaginal disc-derived leg joint morphogenesis | |
|---|---|
|
relationship |
relationship part_of GO:0036011 |
| GO:0016985 : mannan endo-1,4-beta-mannosidase activity | |
|---|---|
|
synonym |
synonym "beta-1,4-mannan 4-mannanohydrolase activity" EXACT [EC:3.2.1.78] "beta-mannanase activity" BROAD [EC:3.2.1.78] "endo-1,4-mannanase activity" BROAD [EC:3.2.1.78] "endo-beta-mannanase activity" BROAD [EC:3.2.1.78] |
| GO:0016996 : endo-alpha-(2,8)-sialidase activity | |
|---|---|
|
name |
name endo-alpha-(2,8)-sialidase activity |
| GO:0018532 : 5,10-methenyl-5,6,7,8-tetrahydromethanopterin dehydrogenase activity | |
|---|---|
|
name synonym |
name 5,10-methenyl-5,6,7,8-tetrahydromethanopterin dehydrogenase activity synonym "coenzyme F420-independent 5,10-methenyl-5,6,7,8-tetrahydromethanopterin dehydrogenase activity" EXACT [] "coenzyme F420-independent methylene-H4MPT dehydrogenase activity" EXACT [] "F420-independent 5,10-methenyl-5,6,7,8-tetrahydromethanopterin dehydrogenase activity" EXACT [] |
| GO:0018537 : coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase activity | |
|---|---|
|
def |
def Catalysis of the reaction: 5-methyltetrahydromethanopterin + coenzyme F420 + H(+) = 5,10-methylenetetrahydromethanopterin + reduced coenzyme F420. |
| GO:0018867 : alpha-pinene metabolic process | |
|---|---|
| GO:0018868 : 2-aminobenzenesulfonate metabolic process | |
|---|---|
| GO:0018871 : 1-aminocyclopropane-1-carboxylate metabolic process | |
|---|---|
| GO:0018872 : arsonoacetate metabolic process | |
|---|---|
| GO:0018873 : atrazine metabolic process | |
|---|---|
| GO:0018882 : (+)-camphor metabolic process | |
|---|---|
| GO:0018885 : carbon tetrachloride metabolic process | |
|---|---|
| GO:0018889 : 2-chloro-N-isopropylacetanilide metabolic process | |
|---|---|
| GO:0018898 : 2,4-dichlorobenzoate metabolic process | |
|---|---|
| GO:0018902 : 1,3-dichloro-2-propanol metabolic process | |
|---|---|
| GO:0018903 : 1,3-dichloropropene metabolic process | |
|---|---|
| GO:0018917 : fluorene metabolic process | |
|---|---|
| GO:0018920 : glyphosate metabolic process | |
|---|---|
| GO:0018921 : 3-hydroxybenzyl alcohol metabolic process | |
|---|---|
| GO:0018922 : iprodione metabolic process | |
|---|---|
| GO:0018923 : limonene metabolic process | |
|---|---|
| GO:0018928 : methyl ethyl ketone metabolic process | |
|---|---|
| GO:0018937 : nitroglycerin metabolic process | |
|---|---|
| GO:0018938 : 2-nitropropane metabolic process | |
|---|---|
| GO:0018952 : parathion metabolic process | |
|---|---|
| GO:0018955 : phenanthrene metabolic process | |
|---|---|
| GO:0018956 : phenanthrene catabolic process via trans-9(R),10(R)-dihydrodiolphenanthrene | |
|---|---|
| GO:0018957 : phenanthrene catabolic process via trans-9(S),10(S)-dihydrodiolphenanthrene | |
|---|---|
| GO:0018961 : pentachlorophenol metabolic process | |
|---|---|
| GO:0018963 : phthalate metabolic process | |
|---|---|
| GO:0018965 : s-triazine compound metabolic process | |
|---|---|
| GO:0018966 : styrene metabolic process | |
|---|---|
| GO:0018970 : toluene metabolic process | |
|---|---|
| GO:0018983 : Z-phenylacetaldoxime metabolic process | |
|---|---|
| GO:0019339 : parathion catabolic process | |
|---|---|
| GO:0019381 : atrazine catabolic process | |
|---|---|
| GO:0019383 : (+)-camphor catabolic process | |
|---|---|
| GO:0019490 : 2-aminobenzenesulfonate desulfonation | |
|---|---|
| GO:0021767 : mammillary body development | |
|---|---|
|
synonym |
|
| GO:0022809 : mobile ion carrier activity | |
|---|---|
|
def |
def This is a type of carrier produced by bacteria. It enables passive transport by shielding the ion that is being transported from the lipid membrane. It carries an ion across the membrane by enclosing the ion and travelling across the membrane. It does not form a fully open pore across the membrane. |
| GO:0030089 : phycobilisome | |
|---|---|
| GO:0030114 : slime layer | |
|---|---|
| GO:0030268 : methylenetetrahydromethanopterin dehydrogenase activity | |
|---|---|
|
def |
def Catalysis of the reaction: 5,10-methylenetetrahydromethanopterin + coenzyme F420 + 2 H(+) = 5,10-methenyl-5,6,7,8-tetrahydromethanopterin + reduced coenzyme F420. |
| GO:0030570 : pectate lyase activity | |
|---|---|
|
def |
def Catalysis of the reaction: a pectate = a pectate + a pectate oligosaccharide with 4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate end. This reaction is the eliminative cleavage of pectate to give oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends. |
| GO:0031216 : neopullulanase activity | |
|---|---|
|
def |
def Catalysis of the hydrolysis of pullulan to panose (6-alpha-D-glucosylmaltose). |
| GO:0031955 : short-chain fatty acid-CoA ligase activity | |
|---|---|
|
synonym |
synonym "short-chain fatty-acid-CoA ligase activity" EXACT [GOC:bf] |
| GO:0031956 : medium-chain fatty acid-CoA ligase activity | |
|---|---|
|
synonym |
synonym "medium-chain fatty-acid-CoA ligase activity" EXACT [GOC:bf] |
| GO:0032488 : Cdc42 protein signal transduction | |
|---|---|
|
synonym "Cdc42 signaling pathway" RELATED [GOC:vw] "Cdc42 signaling" RELATED [GOC:vw] "cdc42 signalling pathway" RELATED [GOC:vw] | |
| GO:0032620 : interleukin-17 production | |
|---|---|
| GO:0032799 : low-density lipoprotein receptor particle metabolic process | |
|---|---|
|
synonym |
synonym "low-density lipoprotein receptor metabolic process" EXACT [GOC:bf, GOC:dph] |
| GO:0032803 : regulation of low-density lipoprotein particle receptor catabolic process | |
|---|---|
|
synonym |
synonym "regulation of low-density lipoprotein receptor catabolic process" EXACT [GOC:bf, GOC:dph] |
| GO:0032805 : positive regulation of low-density lipoprotein particle receptor catabolic process | |
|---|---|
|
synonym |
synonym "positive regulation of low-density lipoprotein receptor catabolic process" EXACT [GOC:bf, GOC:dph] |
| GO:0032909 : regulation of transforming growth factor beta2 production | |
|---|---|
|
synonym |
synonym "regulation of transforming growth factor-beta2 production" EXACT [GOC:bf] |
| GO:0032915 : positive regulation of transforming growth factor beta2 production | |
|---|---|
|
synonym |
synonym "positive regulation of transforming growth factor-beta2 production" EXACT [GOC:bf] |
| GO:0032916 : positive regulation of transforming growth factor beta3 production | |
|---|---|
|
synonym |
synonym "positive regulation of transforming growth factor-beta3 production" EXACT [GOC:bf] |
| GO:0033588 : Elongator holoenzyme complex | |
|---|---|
|
def |
def A heterohexameric protein complex that is involved in modification of wobble nucleosides in tRNA, and exerts direct effects on transcriptional elongation and exocytosis. The complex can associate physically with hyperphosphorylated RNA polymerase II; it contains two discrete heterotrimeric subcomplexes. |
| GO:0033747 : versatile peroxidase activity | |
|---|---|
|
def xref is_a |
def OBSOLETE. Catalysis of the reactions: Reactive Black 5 + hydrogen peroxide = oxidized Reactive Black 5 + 2 H2O, and donor + hydrogen peroxide = oxidized donor + 2 H2O. is_obsolete true replaced_by GO:0004601 consider GO:0052750 |
| GO:0033786 : heptose-1-phosphate adenylyltransferase activity | |
|---|---|
|
name |
name heptose-1-phosphate adenylyltransferase activity synonym "heptose 1-phosphate adenyltransferase activity" EXACT [] |
| GO:0033915 : mannan 1,2-(1,3)-alpha-mannosidase activity | |
|---|---|
|
def is_a |
def Catalysis of the hydrolysis of 1,2- and 1,3-linkages in mannan, releasing mannose. is_a GO:0004559 |
| GO:0033931 : endogalactosaminidase activity | |
|---|---|
|
is_a |
is_a GO:0015929 |
| GO:0033941 : mannan exo-1,2-1,6-alpha-mannosidase activity | |
|---|---|
|
def is_a |
def Catalysis of the hydrolysis of 1,2-alpha-D- and 1,6-alpha-D- linkages in mannan, releasing D-mannose. is_a GO:0004559 |
| GO:0033947 : mannosylglycoprotein endo-beta-mannosidase activity | |
|---|---|
|
is_a |
is_a GO:0004567 |
| GO:0033994 : glucuronan lyase activity | |
|---|---|
|
def |
def Catalysis of the reaction: (1,4)-beta-D-glucuronan = an oligosaccharides with 4-deoxy-beta-D-gluc-4-enuronosyl end + (1,4)-beta-D-glucuronan. This reaction is the eliminative cleavage of (1->4)-beta-D-glucuronans to give oligosaccharides with 4-deoxy-beta-D-gluc-4-enuronosyl groups at their non-reducing ends. Complete degradation of glucuronans results in the formation of tetrasaccharides. |
| GO:0033995 : anhydrosialidase activity | |
|---|---|
|
def |
def Catalysis of the reaction: an N-acetylneuraminate glycoside = 2,7-anhydro-alpha-N-acetylneuraminate + an alpha-sialyl group. This reaction is the elimination of alpha-sialyl groups in N-acetylneuraminic acid glycosides, releasing 2,7-anhydro-alpha-N-acetylneuraminate. |
| GO:0033996 : levan fructotransferase (DFA-IV-forming) activity | |
|---|---|
|
def |
def Catalysis of the reaction: beta-D-fructopyranosyl-(2->6)-[D-fructofuranosyl-(2->6)]n-D-fructofuranoside = beta-D-fructopyranosyl-(2->6)-[D-fructofuranosyl-(2->6)](n-1)-D-fructofuranoside + di-beta-D-fructofuranose 2,6':2',6-dianhydride. This reaction is the production of di-beta-D-fructofuranose 2,6':2',6-dianhydride (DFA IV) by successively eliminating the diminishing (2->6)-beta-D-fructan (levan) chain from the terminal D-fructosyl-D-fructosyl disaccharide. |
| GO:0033997 : inulin fructotransferase (DFA-I-forming) activity | |
|---|---|
|
def |
def Catalysis of the reaction: [(2->1)-beta-D-fructosyl](n) = [(2->1)-beta-D-fructosyl](n-1) + alpha-D-fructofuranose-beta-D-fructofuranose 1,2':1,2'-dianhydride. This reaction is the production of alpha-D-fructofuranose beta-D-fructofuranose 1,2':2,1'-dianhydride (DFA I) by successively eliminating the diminishing (2->1)-beta-D-fructan (inulin) chain from the terminal D-fructosyl-D-fructosyl disaccharide. |
| GO:0033998 : inulin fructotransferase (DFA-III-forming) activity | |
|---|---|
|
def |
def Catalysis of the reaction: [(2->1)-beta-D-fructosyl](n) = [(2->1)-beta-D-fructosyl](n-1) + alpha-D-fructofuranose beta-D-fructofuranose 1,2':2,3'-dianhydride. This reaction is the production of alpha-D-fructofuranose beta-D-fructofuranose 1,2':2,3'-dianhydride (DFA III) by successively eliminating the diminishing (2->1)-beta-D-fructan (inulin) chain from the terminal D-fructosyl-D-fructosyl disaccharide. |
| GO:0033999 : chondroitin B lyase activity | |
|---|---|
|
def |
def Catalysis of the reaction: dermatan sulfate = n 4-deoxy-beta-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine 4-sulfate. This reaction is the eliminative cleavage of dermatan sulfate containing 1,4-beta-D-hexosaminyl and 1,3-beta-D-glucurosonyl or 1,3-alpha-L-iduronosyl linkages to disaccharides containing 4-deoxy-beta-D-gluc-4-enuronosyl groups to yield a 4,5-unsaturated dermatan-sulfate disaccharide (DeltaUA-GalNAC-4S). Chondroitin sulfate B is also known as dermatan sulfate. synonym "dermatan sulfate lyase activity" EXACT [] |
| GO:0034189 : very-low-density lipoprotein particle binding | |
|---|---|
|
def synonym |
def Interacting selectively and non-covalently with a very-low-density lipoprotein particle, a triglyceride-rich lipoprotein particle that is typically composed of APOB100, APOE and APOCs and has a density of about 1.006 g/ml and a diameter of between 20-80 nm. synonym "very-low-density lipoprotein binding" EXACT [GOC:bf, GOC:dph] |
| GO:0034444 : regulation of plasma lipoprotein particle oxidation | |
|---|---|
|
synonym |
synonym "regulation of plasma lipoprotein oxidation" EXACT [GOC:dph] |
| GO:0034487 : vacuolar amino acid transmembrane transport | |
|---|---|
|
synonym |
|
| GO:0034800 : trinitrophenol dihydride denitratase activity | |
|---|---|
|
name def |
name trinitrophenol dihydride denitratase activity def Catalysis of the reaction: trinitrophenol dihydride Meisenheimer complex (aci form) = 2,4-dinitrophenol hydride Meisenheimer complex + NO2. Trinitrophenol is also known as TNP and dinitrophenol is also known as DNP. synonym "2,4,6-trinitrophenol dihydride denitratase activity" EXACT [] "TNP dihydride denitratase activity" EXACT [] |
| GO:0034914 : trinitrophenol hydride denitratase activity | |
|---|---|
|
name def |
name trinitrophenol hydride denitratase activity def Catalysis of the reaction: trinitrophenol hydride Meisenheimer complex = 2,4-dinitrophenol + nitrite. Trinitrophenol is also known as TNP. synonym "2,4,6-trinitrophenol hydride denitratase activity" EXACT [] "TNP hydride denitratase activity" EXACT [] |
| GO:0035287 : head segmentation | |
|---|---|
|
def |
def Partitioning the insect head anlage into a fixed number of segmental units. The number of segments composing the insect head has long been a subject of debate, but it is generally agreed that there are 6 or 7 segments. From anterior to posterior the head segments are the procephalic segments (labral, (ocular), antennal and intercalary) and the gnathal segments (mandibular, maxillary and labial). relationship part_of GO:0060322 |
| GO:0035288 : anterior head segmentation | |
|---|---|
|
def |
def Partitioning the insect head anlage into procephalic (labral, (ocular), antennal and intercalary) segments. The procephalic segments lie anterior to the gnathal (posterior head) segments, and are pattered by different segmentation gene cascades to the abdominal, thoracic and posterior head (gnathal) segments. relationship part_of GO:0097065 |
| GO:0035289 : posterior head segmentation | |
|---|---|
|
def |
def Partitioning the posterior region of the insect head anlage into gnathal (mandibular, maxillary and labial) segments. Unlike the anterior head (procephalic) segments, formation of the posterior head (gnathal) segments occurs by a similar mechanism to trunk segmentation, where a cascade of gap genes, pair-rule genes and segment-polarity genes subdivide the embryo into progressively smaller domains. |
| GO:0035634 : response to stilbenoid | |
|---|---|
| GO:0035643 : L-DOPA receptor activity | |
|---|---|
| GO:0035801 : adrenal cortex development | |
|---|---|
| GO:0035878 : nail development | |
|---|---|
| GO:0035880 : embryonic nail plate morphogenesis | |
|---|---|
| GO:0035980 : invasive growth in response to nitrogen limitation | |
|---|---|
|
def is_a |
def OBSOLETE. The growth of colonies in filamentous chains of cells as a result of a reduced availability of nitrogen. comment This term was made obsolete because the GO term 'pseudohyphal growth ; GO:0007124' describes growth under nitrogen-limiting conditions. is_obsolete true consider GO:0007124 |
| GO:0040027 : negative regulation of vulval development | |
|---|---|
|
synonym |
|
| GO:0042199 : cyanuric acid metabolic process | |
|---|---|
| GO:0042200 : cyanuric acid catabolic process | |
|---|---|
| GO:0042201 : N-cyclopropylmelamine metabolic process | |
|---|---|
| GO:0042202 : N-cyclopropylmelamine catabolic process | |
|---|---|
| GO:0042204 : s-triazine compound catabolic process | |
|---|---|
| GO:0042212 : cresol metabolic process | |
|---|---|
| GO:0042751 : estivation | |
|---|---|
| GO:0042807 : central vacuole | |
|---|---|
| GO:0042909 : acridine transport | |
|---|---|
| GO:0043130 : ubiquitin binding | |
|---|---|
|
def |
def Interacting selectively and non-covalently with ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation. |
| GO:0043371 : negative regulation of CD4-positive, alpha-beta T cell differentiation | |
|---|---|
|
synonym |
|
| GO:0043738 : reduced coenzyme F420 dehydrogenase activity | |
|---|---|
|
def |
def Catalysis of the reaction: methanophenazine + reduced coenzyme F420 = dihydromethanophenazine + coenzyme F420. |
| GO:0043794 : formate dehydrogenase (coenzyme F420) activity | |
|---|---|
|
def |
def Catalysis of the reaction: formate + coenzyme F420 = CO2 + reduced coenzyme F420. |
| GO:0043910 : ATP:coenzyme F420 adenylyltransferase activity | |
|---|---|
|
name |
name ATP:coenzyme F420 adenylyltransferase activity synonym "ATP:coenzyme F420 adenyltransferase activity" EXACT [] |
| GO:0044197 : Rel homology domain binding | |
|---|---|
| GO:0045135 : poly(beta-D-mannuronate) lyase activity | |
|---|---|
|
def |
def Catalysis of the reaction: polysaccharides containing beta-D-mannuronate residues = oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enopyranuronosyl end. This reaction is the eliminative cleavage of polysaccharides containing beta-D-mannuronate residues to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enopyranuronosyl groups at their ends. |
| GO:0046539 : histamine N-methyltransferase activity | |
|---|---|
|
is_a GO:0008757 | |
| GO:0046567 : aphidicolan-16 beta-ol synthase activity | |
|---|---|
|
def is_a |
def Catalysis of the reaction: 9-alpha-copalyl diphosphate + H2O = aphidicolan-16-beta-ol + diphosphate. synonym "9-alpha-copalyl-diphosphate diphosphate-lyase (aphidicolan-16-beta-ol-forming)" EXACT [EC:4.2.3.42] xref EC:4.2.3.42 KEGG:R06313 MetaCyc:RXN-10631 RHEA:26216 is_a GO:0016838 |
| GO:0046576 : rhamnogalacturonan alpha-L-rhamnopyranosyl-(1->4)-alpha-D-galactopyranosyluronide lyase activity | |
|---|---|
|
name def |
name rhamnogalacturonan alpha-L-rhamnopyranosyl-(1->4)-alpha-D-galactopyranosyluronide lyase activity def Catalysis of the cleavage of rhamnogalacturonan, generating oligosaccharides of the form alpha-D-us-galacturonic acid-(1,2)-alpha-L-rhamnose-(1,4)-alpha-D-galacturonate-(1,2)-L-rhamnose-(1,2)-alpha-L-rhamnose-p-(1,4)-alpha-D-galacturonic acid, terminating at the non-reducing end with a hex-4-enopyranosyluronic acid residue. synonym "rhamnogalacturonase B activity" EXACT [PMID:8587995] |
| GO:0047457 : exo-(1,4)-alpha-D-glucan lyase activity | |
|---|---|
|
def |
def Catalysis of the reaction: linear alpha-D-glucan = 1,5-anhydro-D-fructose + beta-D-glucose. |
| GO:0047487 : oligogalacturonide lyase activity | |
|---|---|
|
def |
def Catalysis of the reaction: 4-(4-deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate = 2 5-dehydro-4-deoxy-D-glucuronate. |
| GO:0047489 : pectate disaccharide-lyase activity | |
|---|---|
|
def |
def Catalysis of the reaction: a pectate = a pectate + 4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate. This reaction is the eliminative cleavage of 4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate from the reducing end of pectate, i.e. de-esterified pectin. |
| GO:0047490 : pectin lyase activity | |
|---|---|
|
def |
def Catalysis of the reaction: a pectin = an oligosaccharide with 4-deoxy-6-O-methyl-alpha-D-galact-4-enuronate end + a pectin. This reaction is the eliminative cleavage of (1->4)-alpha-D-galacturonan methyl ester to give oligosaccharides with 4-deoxy-6-O-methyl-alpha-D-galact-4-enuronosyl groups at their nonreducing ends. |
| GO:0047491 : poly(alpha-L-guluronate) lyase activity | |
|---|---|
|
def |
def Catalysis of the reaction: polysaccharides containing a terminal alpha-L-guluronate group = oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl end. This reaction is the eliminative cleavage of polysaccharides containing a terminal a-L-guluronate group, to give oligopolysaccharides with 4-deoxy-a-L-erythro-hex-4-enuronosyl groups at their nonreducing ends. |
| GO:0047492 : xanthan lyase activity | |
|---|---|
|
def |
def Catalysis of the reaction: xanthan = oligosaccharide with 4-deoxy-alpha-L-threo-hex-4-enuronosyl end + pyruvylate mannose. This reaction is the eliminative cleavage of the terminal beta-D-mannosyl-beta-D-1,4-glucuronosyl linkage of the side-chain of the polysaccharide xanthan, leaving a 4-deoxy-alpha-L-threo-hex-4-enuronosyl group at the terminus of the side-chain. |
| GO:0048265 : response to pain | |
|---|---|
| GO:0048749 : compound eye development | |
|---|---|
| GO:0050454 : coenzyme F420 hydrogenase activity | |
|---|---|
|
def |
def Catalysis of the reaction: coenzyme F420 + H(2) + H(+) = reduced coenzyme F420. |
| GO:0050955 : thermoception | |
|---|---|
| GO:0050956 : electroception | |
|---|---|
| GO:0050958 : magnetoreception | |
|---|---|
| GO:0050959 : echolocation | |
|---|---|
| GO:0050970 : detection of electrical stimulus involved in magnetoreception | |
|---|---|
| GO:0050977 : magnetoreception by sensory perception of chemical stimulus | |
|---|---|
| GO:0050978 : magnetoreception by sensory perception of electrical stimulus | |
|---|---|
| GO:0050979 : magnetoreception by sensory perception of mechanical stimulus | |
|---|---|
|
synonym |
|
| GO:0050980 : detection of light stimulus involved in magnetoreception | |
|---|---|
| GO:0051060 : pullulanase activity | |
|---|---|
|
def |
def Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic linkages in pullulan (a linear polymer of alpha-(1,6)-linked maltotriose units) and in amylopectin and glycogen, and the a- and b-limit dextrins of amylopectin and glycogen. |
| GO:0051461 : positive regulation of corticotropin secretion | |
|---|---|
|
synonym |
|
| GO:0051712 : positive regulation of killing of cells of other organism | |
|---|---|
|
synonym |
|
| GO:0052667 : phosphomethylethanolamine N-methyltransferase activity | |
|---|---|
|
is_a GO:0008757 | |
| GO:0052698 : ergothioneine metabolic process | |
|---|---|
| GO:0052699 : ergothioneine biosynthetic process | |
|---|---|
| GO:0052700 : ergothioneine catabolic process | |
|---|---|
| GO:0052704 : ergothioneine biosynthesis from histidine via N-alpha,N-alpha,N-alpha-trimethyl-L-histidine | |
|---|---|
| GO:0052747 : sinapyl alcohol dehydrogenase activity | |
|---|---|
| GO:0052748 : baicalin beta-D-glucuronidase activity | |
|---|---|
| GO:0052749 : glucose-6-phosphate dehydrogenase (coenzyme F420) activity | |
|---|---|
|
def |
def Catalysis of the reaction: beta-D-glucose 6-phosphate + coenzyme F420 + H+ = 6-O-phosphono-D-glucono-1,5-lactone + reduced coenzyme F420. |
| GO:0052752 : reduced coenzyme F420:heterodisulfide oxidoreductase activity | |
|---|---|
|
def |
def Catalysis of the reaction: reduced coenzyme F420 + CoB-S-S-CoM = coenzyme F420 + CoM-SH + CoB-SH. synonym "F420H2:heterodisulfide oxidoreductase activity" EXACT [] |
| GO:0052753 : propan-2-ol:coenzyme F420 oxidoreductase activity | |
|---|---|
|
def |
def Catalysis of the reaction: propan-2-ol + coenzyme F420 = acetone + reduced coenzyme F420. |
| GO:0052754 : GTP:coenzyme F420 guanyltransferase activity | |
|---|---|
| GO:0052755 : reduced coenzyme F420:quinone oxidoreductase activity | |
|---|---|
|
name def synonym |
name reduced coenzyme F420:quinone oxidoreductase activity def Catalysis of the reaction: reduced coenzyme F420 + 2,3-dimethyl-1,4-naphthoquinone = coenzyme F420 + reduced 2,3-dimethyl-1,4-naphthoquinone. Reduced 2,3-dimethyl-1,4-naphthoquinone is also known as 2,3-dimethyl-1,4-hydronaphthoquinone. synonym "F420H2:quinone oxidoreductase activity" EXACT [] |
| GO:0052756 : chitobiose phosphorylase activity | |
|---|---|
|
name def synonym xref is_a |
name chitobiose phosphorylase activity def Catalysis of the reaction: chitobiose + phosphate = N-acetyl-D-glucosamine + N-acetyl-alpha-D-glucosamine 1-phosphate. This reaction is the phosphorolysis of chitobiose, (GlcNAc)2, a dimer of beta-1,4-linked glucosamine units. is_a GO:0004645 |
| GO:0052757 : chondroitin hydrolase activity | |
|---|---|
|
name def synonym xref is_a |
name chondroitin hydrolase activity def Catalysis of the hydrolysis of hexosaminic linkages in chondroitin, a linear polymer structure composed of the repeating disaccharide unit [->4)-D-glucuronic acid-(1->3)-N-acetyl-D-galactosamine-(1-], also written as [->4GlcUA1->3GalNAc1-]. synonym "chondroitin endo-beta-galactosaminidase activity" EXACT [PMID:18390555] xref EC:2.4.1.- is_a GO:0033931 |
| GO:0052758 : coenzyme F420-dependent 2,4,6-trinitrophenol reductase activity | |
|---|---|
|
name def synonym xref is_a |
name coenzyme F420-dependent 2,4,6-trinitrophenol reductase activity def Catalysis of the reaction: 2,4,6-trinitrophenol + H- = 2,4,6-trinitrophenol hydride Meisenheimer complex. Coenzyme F420 supplies the hydride (H-) in the reaction. synonym "coenzyme F420-dependent 2,4,6-trinitrophenol hydride transferase activity" EXACT [] "TNP reductase activity" BROAD [] xref EC:1.3.99.- UM-BBD_reactionID:r1065 is_a GO:0016627 |
| GO:0055099 : response to high density lipoprotein particle stimulus | |
|---|---|
|
synonym |
|
| GO:0060965 : negative regulation of gene silencing by miRNA | |
|---|---|
|
synonym |
synonym "negative regulation of gene silencing by microRNA" EXACT [GOC:bf, GOC:pr] |
| GO:0070297 : regulation of two-component signal transduction system (phosphorelay) | |
|---|---|
|
synonym |
synonym "regulation of two-component signal transduction system" EXACT [GOC:bf, GOC:mah] |
| GO:0070298 : negative regulation of two-component signal transduction system (phosphorelay) | |
|---|---|
|
synonym |
|
| GO:0070299 : positive regulation of two-component signal transduction system (phosphorelay) | |
|---|---|
|
synonym |
|
| GO:0070326 : very-low-density lipoprotein particle receptor binding | |
|---|---|
|
synonym |
synonym "very-low-density lipoprotein receptor binding" EXACT [GOC:bf, GOC:dph] |
| GO:0070497 : 6-carboxy-5,6,7,8-tetrahydropterin synthase activity | |
|---|---|
|
def is_a |
def Catalysis of the reaction: 7,8-dihydroneopterin triphosphate + H2O = 6-carboxy-5,6,7,8-tetrahydropterin + triphosphate + acetaldehyde + 2 H+. xref EC:4.2.1.- MetaCyc:RXN0-5507 is_a GO:0016836 |
| GO:0070885 : negative regulation of calcineurin-NFAT signaling pathway | |
|---|---|
|
synonym |
|
| GO:0070886 : positive regulation of calcineurin-NFAT signaling pathway | |
|---|---|
|
synonym |
|
| GO:0072211 : metanephric pyramids development | |
|---|---|
|
synonym |
synonym "metanephric pyramid development" EXACT [GOC:mah] |
| GO:0072496 : Pup ligase activity | |
|---|---|
|
synonym |
|
| GO:0072557 : IPAF inflammasome complex | |
|---|---|
|
def |
def A protein complex that consists of three components, IPAF, NAIP and caspase-1, and includes among its functions the sensing of flagellin derived from Legionella pneumophila, Salmonella typhimurium, Pseudomonas aeruginosa and Shigella flexneri. |
| GO:0072558 : NLRP1 inflammasome complex | |
|---|---|
|
name def |
name NLRP1 inflammasome complex def A protein complex that consists of two components, NLRP1 (NALP1) and caspase-1 or caspase-5. The exact mechanisms of NLRP1 activation remain obscure, but potassium ion efflux appears to be essential. synonym "NALP1 inflammasome complex" EXACT [] |
| GO:0072559 : NLRP3 inflammasome complex | |
|---|---|
|
name def |
name NLRP3 inflammasome complex def A protein complex that consists of three components, NLRP3 (NALP3), PYCARD and caspase-1. It is activated upon exposure to whole pathogens, as well as a number of structurally diverse pathogen- and danger-associated molecular patterns (PAMPs and DAMPs) and environmental irritants. Whole pathogens demonstrated to activate the NLRP3 inflammasome complex include the fungi Candida albicans and Saccharomyces cerevisiae, bacteria that produce pore-forming toxins, including Listeria monocytogenes and Staphylococcus aureus, and viruses such as Sendai virus, adenovirus, and influenza virus. synonym "NALP3 inflammasome complex" EXACT [] |
| GO:0080101 : phosphatidyl-N-dimethylethanolamine N-methyltransferase activity | |
|---|---|
|
is_a GO:0008757 | |
| GO:0090145 : mitochondrial nucleoid organization involved in mitochondrial fission | |
|---|---|
|
synonym |
synonym "mitochondrial nucleoid organisation involved in mitochondrial fission" EXACT [GOC:ascb_2009, GOC:bf, GOC:dph, GOC:tb] |
| GO:0097086 : amniotic stem cell differentiation | |
|---|---|
| GO:0097087 : interleukin-17A production | |
|---|---|
| GO:0097088 : interleukin-17F production | |
|---|---|
| GO:0097089 : methyl-branched fatty acid metabolic process | |
|---|---|
| GO:0097092 : polyacyltrehalose metabolic process | |
|---|---|
| GO:0097093 : polyacyltrehalose biosynthetic process | |
|---|---|
| GO:0097094 : craniofacial suture morphogenesis | |
|---|---|
| GO:0097095 : frontonasal suture morphogenesis | |
|---|---|
| GO:0097096 : facial suture morphogenesis | |
|---|---|
| GO:0097097 : nasal suture morphogenesis | |
|---|---|
| GO:0097099 : structural constituent of albumen | |
|---|---|
| GO:0097100 : supercoiled DNA binding | |
|---|---|
| GO:0097162 : MADS box domain binding | |
|---|---|
| GO:0097166 : lens epithelial cell proliferation | |
|---|---|
| GO:2000631 : regulation of pre-miRNA processing | |
|---|---|
|
synonym |
|
| GO:2000817 : regulation of histone H3-T3 phosphorylation involved in chromosome passenger complex localization to kinetochore | |
|---|---|
|
synonym |
|
| GO:2000873 : regulation of histone H4 acetylation involved in response to DNA damage stimulus | |
|---|---|
|
synonym |
synonym "regulation of histone H4 acetylation involved in response to DNA damage" EXACT [GOC:bf] |
File Stats
| Ontology | Old file | New file | Change |
|---|---|---|---|
| molecular function |
9107 9107 (100.0%) defined |
9147 9147 (100.0%) defined |
+40 |
| cellular component |
2898 2898 (100.0%) defined |
2900 2900 (100.0%) defined |
+2 |
| biological process |
21439 21439 (100.0%) defined |
21464 21464 (100.0%) defined |
+25 |
| Obsolete | 1585 (4.5% of total) |
1587 (4.5% of total) |
+2 (+0.1%) |
| Totals |
33444 33444 (100.0%) defined 35029 inc. obsoletes |
33511 33511 (100.0%) defined 35098 inc. obsoletes |
+69 (+0.2%) |