GO Monthly Release Notes for May 2006
========================
Generated on Thu Jun 1 15:54:09 2006
Files used:
gene_ontology.obo
OLD: version 3.1441, 28:04:2006 18:11
NEW: version 3.1479, 31:05:2006 17:24
goslim_generic
Key:
|----1----||----2-----||-3--||4||----5----||-----------6-----------|
GO:0009941 GO:0009536 TAIR D SF:575119 chloroplast envelope
(obs)
1. GO ID number
2. GO-slim term(s) that new term was added under or "obs" if the term is obsolete.
Terms with more than one GO-slim parent have further parents listed underneath the first parent.
3. Database that added term
4. indicates the existence of a definition for the term
5. the sourceforge request ID the term was added in response to
6. term name
Columns are tab-delimited and can be imported into Excel for ease of reading.
New terms in biological_process ontology (60 new terms)
GO:0002051 GO:0007582 MGI D osteoblast fate commitment
GO:0030154
GO:0002052 GO:0007275 MGI D positive regulation of neuroblast proliferation
GO:0008283
GO:0050789
GO:0002053 GO:0008283 MGI D positive regulation of mesenchymal cell proliferation
GO:0050789
GO:0002062 GO:0030154 MGI D chondrocyte differentiation
GO:0002063 GO:0030154 MGI D chondrocyte development
GO:0032053 GO:0006996 MAH D 1479905 basal body organization and biogenesis
GO:0032054 GO:0006996 MAH D 1479905 basal body duplication
GO:0032055 GO:0006412 MAH D 1481063 negative regulation of translation in response to stress
GO:0006950
GO:0050789
GO:0032056 GO:0006412 MAH D 1481063 positive regulation of translation in response to stress
GO:0006950
GO:0050789
GO:0032057 GO:0006412 MAH D 1481063 negative regulation of translation initiation in response to stress
GO:0006950
GO:0050789
GO:0032058 GO:0006412 MAH D 1481063 positive regulation of translation initiation in response to stress
GO:0006950
GO:0050789
GO:0032060 GO:0009653 MAH D 1478615 bleb formation
GO:0016043
GO:0032061 GO:0006412 MAH D 1481063 negative regulation of translation in response to osmotic stress
GO:0006950
GO:0009628
GO:0050789
GO:0032062 GO:0006412 MAH D 1481063 positive regulation of translation in response to osmotic stress
GO:0006950
GO:0009628
GO:0050789
GO:0032063 GO:0006412 MAH D 1481063 negative regulation of translation initiation in response to osmotic stress
GO:0006950
GO:0009628
GO:0050789
GO:0032064 GO:0006412 MAH D 1481063 positive regulation of translation initiation in response to osmotic stress
GO:0006950
GO:0009628
GO:0050789
GO:0032065 GO:0007582 MAH D 1475597 cortical protein anchoring
GO:0032066 GO:0006810 MAH D 1460050 nucleolus to nucleoplasm transport
GO:0016043
GO:0043643 GO:0008152 JL D 1475410 tetracycline metabolism
GO:0043644 GO:0009058 JL D 1475410 tetracycline biosynthesis
GO:0043645 GO:0008152 JL D 1475410 cephalosporin metabolism
GO:0043646 GO:0009058 JL D 1475410 cephalosporin biosynthesis
GO:0043647 GO:0005975 JL D 1469441 myo-inositol phosphate metabolism
GO:0043648 GO:0008152 JL D 1469441 dicarboxylic acid metabolism
GO:0043649 GO:0009056 JL D 1469441 dicarboxylic acid catabolism
GO:0043650 GO:0009058 JL D 1469441 dicarboxylic acid biosynthesis
GO:0043651 GO:0006629 JL D linoleic acid metabolism
GO:0043652 GO:0006810 JL D 1452868 engulfment of apoptotic cell
GO:0008219
GO:0043653 GO:0008219 JL D 1452866 mitochondrial fragmentation during apoptosis
GO:0043654 GO:0006810 JL D 1482638 recognition of apoptotic cell
GO:0008219
GO:0048809 GO:0009653 JIC D 1101748 analia morphogenesis (sensu Endopterygota)
GO:0048810 GO:0009653 JIC D 1101748 female analia morphogenesis (sensu Endopterygota)
GO:0048811 GO:0009653 JIC D 1101748 male analia morphogenesis (sensu Endopterygota)
GO:0048812 GO:0009653 JIC D 1101748 neurite morphogenesis
GO:0016043
GO:0030154
GO:0048813 GO:0009653 JIC D 1101748 dendrite morphogenesis
GO:0016043
GO:0030154
GO:0048814 GO:0009653 JIC D 1101748 regulation of dendrite morphogenesis
GO:0016043
GO:0030154
GO:0050789
GO:0048815 GO:0009653 JIC D 1101748 hermaphrodite genitalia morphogenesis
GO:0048816 GO:0009653 JIC D 1101748 ocellus morphogenesis
GO:0048817 GO:0007275 JIC D 1459965 negative regulation of hair follicle maturation
GO:0007582
GO:0050789
GO:0048818 GO:0007275 JIC D 1459965 positive regulation of hair follicle maturation
GO:0007582
GO:0050789
GO:0048819 GO:0007275 JIC D 1459965 regulation of hair follicle maturation
GO:0007582
GO:0050789
GO:0048820 GO:0007275 JIC D 1459965 hair follicle maturation
GO:0007582
GO:0048821 GO:0030154 JIC D 1459965 erythrocyte development
GO:0048822 GO:0030154 JIC D 1459965 enucleate erythrocyte development
GO:0048823 GO:0030154 JIC D 1459965 nucleate erythrocyte development
GO:0048824 GO:0030154 JIC D 1491907 pigment cell precursor differentiation
GO:0048825 GO:0000003 JIC D 1439512 cotyledon development
GO:0009790
GO:0048826 GO:0000003 JIC D 1439512 cotyledon morphogenesis
GO:0009653
GO:0009790
GO:0048827 GO:0007275 JIC D 1439512 phyllome development
GO:0048828 GO:0000003 JIC D 1439512 embryonic morphogenesis (sensu Magnoliophyta)
GO:0009653
GO:0009790
GO:0048829 GO:0007275 JIC D 1439513 root cap development
GO:0048830 GO:0007275 JIC D 1439513 adventitious root development
GO:0048831 GO:0007275 JIC D 1439512 regulation of shoot development
GO:0050789
GO:0048832 GO:0007275 JIC D 1438331 regulation of organ number
GO:0050789
GO:0048833 GO:0007275 JIC D 1438331 regulation of floral organ number
GO:0050789
GO:0048834 GO:0007275 JIC D 1438331 regulation of petal number
GO:0050789
GO:0048835 GO:0007275 JIC D 1438331 negative regulation of petal number
GO:0050789
GO:0048836 GO:0007275 JIC D 1438331 positive regulation of petal number
GO:0050789
GO:0048837 GO:0006950 JIC D 1438210 sorus development
GO:0007154
GO:0007275
GO:0007582
GO:0009605
GO:0048838 GO:0000003 JIC D 929957 release of seed from dormancy
GO:0007275
GO:0007582
Term name changes in biological_process ontology
GO:0006074: beta-1,3 glucan metabolism --> 1,3-beta-glucan metabolism
GO:0006075: beta-1,3 glucan biosynthesis --> 1,3-beta-glucan biosynthesis
GO:0006076: beta-1,3 glucan catabolism --> 1,3-beta-glucan catabolism
GO:0006077: beta-1,6 glucan metabolism --> 1,6-beta-glucan metabolism
GO:0006078: beta-1,6 glucan biosynthesis --> 1,6-beta-glucan biosynthesis
GO:0006079: beta-1,6 glucan catabolism --> 1,6-beta-glucan catabolism
GO:0007487: analia morphogenesis (sensu Endopterygota) --> analia development (sensu Endopterygota)
GO:0008056: ocellus morphogenesis --> ocellus development
GO:0016358: dendrite morphogenesis --> dendrite development
GO:0030989: horsetail movement --> horsetail nuclear movement
GO:0031150: stalk formation (sensu Dictyosteliida) --> stalk development (sensu Dictyosteliida)
GO:0031152: aggregation during fruiting body formation --> aggregation during fruiting body development
GO:0031153: slug formation during fruiting body formation --> slug development during fruiting body development
GO:0031154: culmination during fruiting body formation --> culmination during fruiting body development
GO:0031175: neurite morphogenesis --> neurite development
GO:0040035: hermaphrodite genital morphogenesis --> hermaphrodite genitalia development
GO:0045496: male analia morphogenesis (sensu Endopterygota) --> male analia development (sensu Endopterygota)
GO:0045497: female analia morphogenesis (sensu Endopterygota) --> female analia development (sensu Endopterygota)
GO:0050773: regulation of dendrite morphogenesis --> regulation of dendrite development
GO:0051797: regulation of hair follicle maturation --> regulation of hair follicle development
GO:0051798: positive regulation of hair follicle maturation --> positive regulation of hair follicle development
GO:0051799: negative regulation of hair follicle maturation --> negative regulation of hair follicle development
New term merges in biological_process ontology
GO:0001943 has been merged into GO:0001942, hair follicle development
Term movements in biological_process ontology:
Terms movements under GO Slim term 'development ; GO:0007275'
+ GO:0001308, loss of chromatin silencing during replicative cell aging
+ GO:0007487, analia development (sensu Endopterygota)
+ GO:0008056, ocellus development
+ GO:0009640, photomorphogenesis
+ GO:0009647, skotomorphogenesis
+ GO:0009704, de-etiolation
+ GO:0010099, regulation of photomorphogenesis
+ GO:0010100, negative regulation of photomorphogenesis
- GO:0040029, regulation of gene expression, epigenetic
+ GO:0040035, hermaphrodite genitalia development
+ GO:0045496, male analia development (sensu Endopterygota)
+ GO:0045497, female analia development (sensu Endopterygota)
Terms movements under GO Slim term 'physiological process ; GO:0007582'
+ GO:0001708, cell fate specification
+ GO:0001709, cell fate determination
+ GO:0001710, mesodermal cell fate commitment
+ GO:0001711, endodermal cell fate commitment
+ GO:0001712, ectodermal cell fate commitment
+ GO:0001713, ectodermal cell fate determination
+ GO:0001714, endodermal cell fate specification
+ GO:0001715, ectodermal cell fate specification
+ GO:0001752, eye photoreceptor fate commitment (sensu Endopterygota)
+ GO:0001759, induction of an organ
+ GO:0001827, inner cell mass cell fate commitment
+ GO:0001830, trophectodermal cell fate commitment
+ GO:0001942, hair follicle development
+ GO:0007278, pole cell fate determination
+ GO:0007294, oocyte fate determination (sensu Insecta)
+ GO:0007393, dorsal closure, leading edge cell fate determination
+ GO:0007400, neuroblast fate determination
+ GO:0007402, ganglion mother cell fate determination
+ GO:0007403, glial cell fate determination
+ GO:0007425, tracheal epithelial cell fate determination (sensu Insecta)
+ GO:0007459, photoreceptor fate commitment (sensu Endopterygota)
+ GO:0007460, R8 cell fate commitment
+ GO:0007461, restriction of R8 fate
+ GO:0007462, R1/R6 cell fate commitment
+ GO:0007463, R2/R5 cell fate commitment
+ GO:0007465, R7 cell fate commitment
+ GO:0007466, cone cell fate commitment (sensu Endopterygota)
+ GO:0007493, endodermal cell fate determination
+ GO:0007500, mesodermal cell fate determination
+ GO:0007501, mesodermal cell fate specification
+ GO:0007510, cardioblast cell fate determination
+ GO:0007518, myoblast cell fate determination
+ GO:0007521, muscle cell fate determination
+ GO:0009912, auditory receptor cell fate commitment
+ GO:0009957, epidermal cell fate specification
+ GO:0009996, negative regulation of cell fate specification
+ GO:0009997, negative regulation of cardioblast cell fate specification
+ GO:0009998, negative regulation of retinal cone cell fate specification
+ GO:0009999, negative regulation of auditory receptor cell fate specification
+ GO:0010000, negative regulation of cone cell fate specification (sensu Endopterygota)
+ GO:0010158, abaxial cell fate specification
+ GO:0010234, tapetal cell fate specification
+ GO:0014017, neuroblast fate commitment
+ GO:0014018, neuroblast fate specification
+ GO:0014030, mesenchymal cell fate commitment
+ GO:0014034, neural crest cell fate commitment
+ GO:0014035, neural crest cell fate determination
+ GO:0014036, neural crest cell fate specification
+ GO:0016360, sensory organ precursor cell fate determination
+ GO:0030716, oocyte fate determination
+ GO:0031069, hair follicle morphogenesis
+ GO:0031128, induction
+ GO:0031129, inductive cell-cell signaling
+ GO:0031130, creation of an inductive signal
+ GO:0031131, reception of an inductive signal
+ GO:0035027, leading edge cell fate commitment
+ GO:0035028, leading edge cell fate determination
+ GO:0035029, dorsal closure, leading edge cell fate commitment
+ GO:0035052, aortic cell fate commitment (sensu Insecta)
+ GO:0035053, heart proper cell fate commitment (sensu Insecta)
+ GO:0035153, tracheal epithelial cell type specification
+ GO:0035154, terminal cell fate specification
+ GO:0035155, negative regulation of terminal cell fate specification
+ GO:0035156, fusion cell fate specification
+ GO:0035157, negative regulation of fusion cell fate specification
+ GO:0035310, notum cell fate specification
+ GO:0035311, wing cell fate specification
+ GO:0042055, neuron lineage restriction
+ GO:0042659, regulation of cell fate specification
+ GO:0042660, positive regulation of cell fate specification
+ GO:0042661, regulation of mesodermal cell fate specification
+ GO:0042662, negative regulation of mesodermal cell fate specification
+ GO:0042663, regulation of endodermal cell fate specification
+ GO:0042664, negative regulation of endodermal cell fate specification
+ GO:0042665, regulation of ectodermal cell fate specification
+ GO:0042666, negative regulation of ectodermal cell fate specification
+ GO:0042667, auditory receptor cell fate specification
+ GO:0042668, auditory receptor cell fate determination
+ GO:0042669, regulation of auditory receptor cell fate specification
+ GO:0042671, retinal cone cell fate determination
+ GO:0042672, retinal cone cell fate specification
+ GO:0042673, regulation of retinal cone cell fate specification
+ GO:0042676, cone cell fate commitment
+ GO:0042677, cone cell fate determination (sensu Endopterygota)
+ GO:0042678, cone cell fate specification (sensu Endopterygota)
+ GO:0042679, cone cell fate specification
+ GO:0042680, cone cell fate determination
+ GO:0042681, regulation of cone cell fate specification (sensu Endopterygota)
+ GO:0042682, regulation of cone cell fate specification
+ GO:0042683, negative regulation of cone cell fate specification
+ GO:0042684, cardioblast cell fate commitment
+ GO:0042685, cardioblast cell fate specification
+ GO:0042686, regulation of cardioblast cell fate specification
+ GO:0042693, muscle cell fate commitment
+ GO:0042694, muscle cell fate specification
+ GO:0042706, eye photoreceptor cell fate commitment
+ GO:0042707, non-eye photoreceptor cell fate commitment
+ GO:0043347, neuroblast fate determination (sensu Nematoda and Protostomia)
+ GO:0043348, neuroblast fate determination (sensu Vertebrata)
+ GO:0043356, epidermal cell fate specification (sensu Insecta)
+ GO:0043361, glial cell fate determination (sensu Nematoda and Protostomia)
+ GO:0045165, cell fate commitment
+ GO:0045168, cell-cell signaling during cell fate commitment
+ GO:0045464, R8 cell fate specification
+ GO:0045500, sevenless signaling pathway
+ GO:0045501, regulation of sevenless signaling pathway
+ GO:0045873, negative regulation of sevenless signaling pathway
+ GO:0045874, positive regulation of sevenless signaling pathway
+ GO:0046331, lateral inhibition
+ GO:0046551, retinal cone cell fate commitment
+ GO:0046552, photoreceptor cell fate commitment
+ GO:0046845, branched duct epithelial cell fate determination (sensu Insecta)
+ GO:0048322, axial mesodermal cell fate commitment
+ GO:0048323, axial mesodermal cell fate determination
+ GO:0048324, regulation of axial mesodermal cell fate determination
+ GO:0048325, negative regulation of axial mesodermal cell fate determination
+ GO:0048326, positive regulation of axial mesodermal cell fate determination
+ GO:0048327, axial mesodermal cell fate specification
+ GO:0048328, regulation of axial mesodermal cell fate specification
+ GO:0048329, negative regulation of axial mesodermal cell fate specification
+ GO:0048330, positive regulation of axial mesodermal cell fate specification
+ GO:0048334, regulation of mesodermal cell fate determination
+ GO:0048335, negative regulation of mesodermal cell fate determination
+ GO:0048336, positive regulation of mesodermal cell fate determination
+ GO:0048337, positive regulation of mesodermal cell fate specification
+ GO:0048343, paraxial mesodermal cell fate commitment
+ GO:0048344, paraxial mesodermal cell fate determination
+ GO:0048345, regulation of paraxial mesodermal cell fate determination
+ GO:0048346, positive regulation of paraxial mesodermal cell fate determination
+ GO:0048347, negative regulation of paraxial mesodermal cell fate determination
+ GO:0048348, paraxial mesodermal cell fate specification
+ GO:0048349, regulation of paraxial mesodermal cell fate specification
+ GO:0048350, positive regulation of paraxial mesodermal cell fate specification
+ GO:0048351, negative regulation of paraxial mesodermal cell fate specification
+ GO:0048372, lateral mesodermal cell fate commitment
+ GO:0048373, lateral mesodermal cell fate determination
+ GO:0048374, regulation of lateral mesodermal cell fate determination
+ GO:0048375, negative regulation of lateral mesodermal cell fate determination
+ GO:0048376, positive regulation of lateral mesodermal cell fate determination
+ GO:0048377, lateral mesodermal cell fate specification
+ GO:0048378, regulation of lateral mesodermal cell fate specification
+ GO:0048379, positive regulation of lateral mesodermal cell fate specification
+ GO:0048380, negative regulation of lateral mesodermal cell fate specification
+ GO:0048393, intermediate mesodermal cell fate commitment
+ GO:0048394, intermediate mesodermal cell fate determination
+ GO:0048395, regulation of intermediate mesodermal cell fate determination
+ GO:0048396, negative regulation of intermediate mesodermal cell fate determination
+ GO:0048397, positive regulation of intermediate mesodermal cell fate determination
+ GO:0048398, intermediate mesodermal cell fate specification
+ GO:0048399, regulation of intermediate mesodermal cell fate specification
+ GO:0048400, positive regulation of intermediate mesodermal cell fate specification
+ GO:0048401, negative regulation of intermediate mesodermal cell fate specification
+ GO:0048600, oocyte fate commitment
+ GO:0048625, myoblast cell fate commitment
+ GO:0048626, myoblast cell fate specification
+ GO:0048629, trichome patterning (sensu Magnoliophyta)
+ GO:0048663, neuron fate commitment
+ GO:0048664, neuron fate determination
+ GO:0048665, neuron fate specification
Terms movements under GO Slim term 'catabolism ; GO:0009056'
+ GO:0019266, asparagine biosynthesis from oxaloacetate
Terms movements under GO Slim term 'biosynthesis ; GO:0009058'
+ GO:0019445, tyrosine catabolism to fumarate
+ GO:0019460, glutamate catabolism to fumarate
+ GO:0019461, glutamate catabolism to fumarate, using glutamate synthase (NADPH)
+ GO:0019462, glutamate catabolism to fumarate, using glutaminase
+ GO:0019554, glutamate catabolism to oxaloacetate
Terms movements under GO Slim term 'response to abiotic stimulus ; GO:0009628'
+ GO:0010231, maintenance of dormancy
Terms movements under GO Slim term 'morphogenesis ; GO:0009653'
- GO:0007487, analia development (sensu Endopterygota)
- GO:0008056, ocellus development
- GO:0009640, photomorphogenesis
- GO:0009647, skotomorphogenesis
- GO:0009704, de-etiolation
- GO:0010099, regulation of photomorphogenesis
- GO:0010100, negative regulation of photomorphogenesis
- GO:0016358, dendrite development
- GO:0031175, neurite development
- GO:0040035, hermaphrodite genitalia development
- GO:0043131, enucleation
- GO:0043249, erythrocyte maturation
- GO:0043354, enucleate erythrocyte maturation
- GO:0043362, nucleate erythrocyte maturation
- GO:0045496, male analia development (sensu Endopterygota)
- GO:0045497, female analia development (sensu Endopterygota)
- GO:0050773, regulation of dendrite development
Terms movements under GO Slim term 'response to endogenous stimulus ; GO:0009719'
+ GO:0010231, maintenance of dormancy
Terms movements under GO Slim term 'cell organization and biogenesis ; GO:0016043'
- GO:0016358, dendrite development
- GO:0031175, neurite development
- GO:0043131, enucleation
- GO:0043249, erythrocyte maturation
- GO:0043354, enucleate erythrocyte maturation
- GO:0043362, nucleate erythrocyte maturation
- GO:0050773, regulation of dendrite development
New terms in cellular_component ontology (45 new terms)
GO:0032059 GO:0005623 MAH D 1478615 bleb
GO:0044420 GO:0005575 JL D extracellular matrix part
GO:0044421 GO:0005576 JL D extracellular region part
GO:0044422 GO:0043226 JL D organelle part
GO:0044423 GO:0005575 JL D virion part
GO:0044424 GO:0005622 JL D intracellular part
GO:0044425 GO:0005623 JL D membrane part
GO:0044426 GO:0005618 JL D cell wall part
GO:0044427 GO:0005694 JL D chromosomal part
GO:0044428 GO:0005634 JL D nuclear part
GO:0044429 GO:0005739 JL D mitochondrial part
GO:0044430 GO:0005856 JL D cytoskeletal part
GO:0044431 GO:0005794 JL D Golgi apparatus part
GO:0044432 GO:0005783 JL D endoplasmic reticulum part
GO:0044433 GO:0005737 JL D cytoplasmic vesicle part
GO:0043226
GO:0044434 GO:0009536 JL D chloroplast part
GO:0044435 GO:0009536 JL D plastid part
GO:0044436 GO:0009579 JL D thylakoid part
GO:0044437 GO:0005773 JL D vacuolar part
GO:0044438 GO:0005737 JL D microbody part
GO:0043226
GO:0044439 GO:0005777 JL D peroxisomal part
GO:0044440 GO:0005768 JL D endosomal part
GO:0044441 GO:0005929 JL D cilium part
GO:0044442 GO:0005622 JL D flagellar part (sensu Eukaryota)
GO:0043226
GO:0044443 GO:0005622 JL D fimbrial part
GO:0043226
GO:0044444 GO:0005737 JL D cytoplasmic part
GO:0044445 GO:0005829 JL D cytosolic part
GO:0044446 GO:0005622 JL D intracellular organelle part
GO:0043226
GO:0044447 GO:0005622 JL D axoneme part
GO:0043226
GO:0044448 GO:0005737 JL D cell cortex part
GO:0044449 GO:0005737 JL D contractile fiber part
GO:0044450 GO:0005815 JL D microtubule organizing center part
GO:0044451 GO:0005654 JL D nucleoplasm part
GO:0044452 GO:0005730 JL D nucleolar part
GO:0044453 GO:0005635 JL D nuclear membrane part
GO:0044454 GO:0000228 JL D nuclear chromosome part
GO:0044455 GO:0005739 JL D mitochondrial membrane part
GO:0044456 GO:0005575 JL D synapse part
GO:0044457 GO:0005623 JL D cell septum part
GO:0044459 GO:0005886 JL D plasma membrane part
GO:0044460 GO:0005623 JL D flagellar part
GO:0044461 GO:0005623 JL D flagellar part (sensu Bacteria)
GO:0044462 GO:0030312 JL D external encapsulating structure part
GO:0044463 GO:0005623 JL D cell projection part
GO:0044464 GO:0005623 JL D cell part
Term name changes in cellular_component ontology
GO:0042642: actomyosin, myosin component --> actomyosin, myosin part
GO:0042643: actomyosin, actin component --> actomyosin, actin part
New definitions for cellular_component ontology terms (2 new definitions)
GO:0009418, fimbrial shaft
GO:0009419, fimbrial tip
New term merges in cellular_component ontology
GO:0030025 has been merged into GO:0031675, NADH dehydrogenase complex (plastoquinone)
Term movements in cellular_component ontology:
Terms movements under GO Slim term 'nuclear chromosome ; GO:0000228'
- GO:0000812, SWR1 complex
- GO:0005677, chromatin silencing complex
- GO:0005678, chromatin assembly complex
- GO:0008623, chromatin accessibility complex
- GO:0016514, SWI/SNF complex
- GO:0016585, chromatin remodeling complex
- GO:0016586, RSC complex
- GO:0016587, ISW1 complex
- GO:0016589, NURF complex
- GO:0016590, ACF complex
- GO:0030869, RENT complex
- GO:0031010, ISWI complex
- GO:0031011, INO80 complex
- GO:0031213, RSF complex
- GO:0035059, RCAF complex
- GO:0035060, brahma complex
- GO:0048188, COMPASS complex
- GO:0048189, Lid2 complex
Terms movements under GO Slim term 'intracellular ; GO:0005622'
+ GO:0009342, glutamate synthase complex (NADPH)
+ GO:0012506, vesicle membrane
+ GO:0019866, organelle inner membrane
+ GO:0031026, glutamate synthase complex
+ GO:0031027, glutamate synthase complex (NADH)
+ GO:0031090, organelle membrane
+ GO:0031300, intrinsic to organelle membrane
+ GO:0031301, integral to organelle membrane
+ GO:0031312, extrinsic to organelle membrane
+ GO:0031588, AMP-activated protein kinase complex
+ GO:0031967, organelle envelope
+ GO:0031968, organelle outer membrane
+ GO:0031970, organelle envelope lumen
+ GO:0031984, organelle subcompartment
Terms movements under GO Slim term 'cell ; GO:0005623'
- GO:0009342, glutamate synthase complex (NADPH)
- GO:0012506, vesicle membrane
- GO:0019866, organelle inner membrane
- GO:0031026, glutamate synthase complex
- GO:0031027, glutamate synthase complex (NADH)
- GO:0031090, organelle membrane
- GO:0031300, intrinsic to organelle membrane
- GO:0031301, integral to organelle membrane
- GO:0031312, extrinsic to organelle membrane
- GO:0031588, AMP-activated protein kinase complex
- GO:0031968, organelle outer membrane
Terms movements under GO Slim term 'nucleoplasm ; GO:0005654'
+ GO:0000812, SWR1 complex
+ GO:0005677, chromatin silencing complex
+ GO:0005678, chromatin assembly complex
+ GO:0008623, chromatin accessibility complex
+ GO:0016514, SWI/SNF complex
+ GO:0016585, chromatin remodeling complex
+ GO:0016586, RSC complex
+ GO:0016587, ISW1 complex
+ GO:0016589, NURF complex
+ GO:0016590, ACF complex
+ GO:0030869, RENT complex
+ GO:0031010, ISWI complex
+ GO:0031011, INO80 complex
+ GO:0031213, RSF complex
+ GO:0035059, RCAF complex
+ GO:0035060, brahma complex
+ GO:0048189, Lid2 complex
Terms movements under GO Slim term 'cytoskeleton ; GO:0005856'
+ GO:0031913, contractile vacuole pore
Terms movements under GO Slim term 'unlocalized protein complex ; GO:0005941'
+ GO:0000136, alpha-1,6-mannosyltransferase complex
+ GO:0031248, protein acetyltransferase complex
+ GO:0031414, N-terminal protein acetyltransferase complex
+ GO:0031415, NatA complex
+ GO:0031416, NatB complex
+ GO:0031417, NatC complex
+ GO:0031431, Dbf4-dependent protein kinase complex
+ GO:0031501, mannosyltransferase complex
+ GO:0031502, dolichyl-phosphate-mannose-protein mannosyltransferase complex
+ GO:0031510, SUMO activating enzyme complex
+ GO:0031617, NMS complex
+ GO:0031680, G-protein beta/gamma-subunit complex
+ GO:0031838, haptoglobin-hemoglobin complex
Terms movements under GO Slim term 'organelle ; GO:0043226'
+ GO:0001520, outer dense fiber
+ GO:0001534, radial spoke
+ GO:0001535, radial spokehead
+ GO:0001536, radial spoke stalk
+ GO:0005930, axoneme
+ GO:0005931, nexin
+ GO:0030990, intraflagellar transport particle
+ GO:0030991, intraflagellar transport particle A
+ GO:0030992, intraflagellar transport particle B
+ GO:0030993, axonemal heterotrimeric kinesin-II complex
Terms movements under GO Slim term 'protein complex ; GO:0043234'
- GO:0000136, alpha-1,6-mannosyltransferase complex
- GO:0031248, protein acetyltransferase complex
- GO:0031414, N-terminal protein acetyltransferase complex
- GO:0031415, NatA complex
- GO:0031416, NatB complex
- GO:0031417, NatC complex
- GO:0031431, Dbf4-dependent protein kinase complex
- GO:0031501, mannosyltransferase complex
- GO:0031502, dolichyl-phosphate-mannose-protein mannosyltransferase complex
- GO:0031510, SUMO activating enzyme complex
- GO:0031617, NMS complex
- GO:0031680, G-protein beta/gamma-subunit complex
- GO:0031838, haptoglobin-hemoglobin complex
+ GO:0031913, contractile vacuole pore
New terms in molecular_function ontology (11 new terms)
GO:0002054 GO:0005488 MGI D 1490281 nucleobase binding
GO:0002055 GO:0005488 MGI D 1490281 adenine binding
GO:0002056 GO:0005488 MGI D 1490281 cytosine binding
GO:0002057 GO:0005488 MGI D 1490281 guanine binding
GO:0002058 GO:0005488 MGI D 1490281 uracil binding
GO:0002059 GO:0005488 MGI D 1490281 thymine binding
GO:0002060 GO:0005488 MGI D 1490281 purine binding
GO:0002061 GO:0005488 MGI D 1490281 pyrimidine binding
GO:0032050 GO:0005515 MAH D clathrin heavy chain binding
GO:0032051 GO:0005515 MAH D clathrin light chain binding
GO:0032052 GO:0005488 MAH D 1478417 bile acid binding
New term merges in molecular_function ontology
GO:0030024 has been merged into GO:0031679, NADH dehydrogenase (plastoquinone) activity
SourceForge items closed this month:
SF id Resolution SF item title GO ids added, if any
1101748 Accepted standardizing morphogenesis terms GO:0048667 GO:0048800 GO:0048801 GO:0048802 GO:0048803 GO:0048804 GO:0048805 GO:0048806 GO:0048807 GO:0048808 GO:0048809 GO:0048810 GO:0048811 GO:0048812 GO:0048813 GO:0048814 GO:0048815 GO:0048816
1150938 Accepted morphogenesis terms [none]
1379031 Works For Me parentage of cell surface (sensu M.) GO:0009928 [none]
1423297 Works For Me NTR: monoooritentation of sister kinetochores [none]
1438210 Accepted changes to fruiting body morphogenesis (sensu Dictyosteliida GO:0048837
1438331 Accepted TAIR development terms-February, 2006 GO:0048832 GO:0048833 GO:0048834 GO:0048835 GO:0048836
1439512 Accepted cotyledon development GO:0048825 GO:0048826 GO:0048827 GO:0048828 GO:0048829 GO:0048830 GO:0048831
1439513 Accepted root development GO:0048829 GO:0048830
1452866 Accepted mitochondrial fragmentation during apoptosis GO:0043653
1452868 Accepted engulfment of the apoptotic cell GO:0043652
1459965 Accepted Maturation standard definition GO:0048817 GO:0048818 GO:0048819 GO:0048820 GO:0048821 GO:0048822 GO:0048823
1460050 Accepted ntr nucleolus transport (was inc children nucleocyto...) GO:0032066
1472296 Fixed metabolism, biosynthesis and catabolism std defs [none]
1475597 Accepted ntr: cortical anchoring GO:0032065
1475602 Fixed plastoquinone reductase merges [none]
1477662 Fixed TPV: regulation of gene expression, epigenetic [none]
1478417 Accepted ntr: bile acid binding GO:0032052
1478615 Accepted bleb formation GO:0032059 GO:0032060
1479905 Accepted ntr: basal body duplication GO:0032053 GO:0032054
1480569 Accepted inner ear morph is_a ear morph.? [none]
1481063 Fixed tvp in regulation of translation initiation GO:0032055 GO:0032056 GO:0032057 GO:0032058 GO:0032061 GO:0032062 GO:0032063 GO:0032064
1481790 Fixed minor typo Smc5-Smc6 complex [none]
1481914 Fixed refine definition of MF term: 3705 [none]
1482449 Fixed mp: negative regulation of translation [none]
1482638 Accepted New term: recognition of the apoptotic cell GO:0043654
1482641 Accepted Modification of term definition: apoptotic cell clearance [none]
1483775 Accepted update to term horsetail movement [none]
1487620 Accepted Change term def: GO:0006910 phagocytosis, recognition [none]
1487660 Accepted Change term def: GO:0006911; phagocytosis, engulfment [none]
1490230 Accepted update def :telomere clustering [none]
1491907 Accepted pigment cell precursor differentiation GO:0048824
1492775 Fixed inconsistency beta-1,3 glucan biosynthesis [none]
1492786 Duplicate inconsistency beta-1,3 glucan biosynthesis [none]
929957 Accepted vivipary GO:0048623 GO:0048624 GO:0048838
Statistics:
biological_process: 11016 terms, 98.0% defined (10800 terms defined)
cellular_component: 1866 terms, 96.5% defined (1800 terms defined)
molecular_function: 7956 terms, 92.2% defined (7332 terms defined)
Total: 20838 terms, 95.7% defined (19932 terms defined)
Term errors
none