GO Monthly Release Notes for August 2005
========================
Generated on Mon Sep 5 13:56:32 2005
Files used:
gene_ontology.obo
OLD: version 3.1014, 28:07:2005 15:19
NEW: version 3.1072, 30:08:2005 09:53
goslim_generic
Key:
|----1----||----2-----||-3--||4||----5----||-----------6-----------|
GO:0009941 GO:0009536 TAIR D SF:575119 chloroplast envelope
(obs)
1. GO ID number
2. GO-slim term(s) that new term was added under or "obs" if the term is obsolete.
Terms with more than one GO-slim parent have further parents listed underneath the first parent.
3. Database that added term
4. indicates the existence of a definition for the term
5. the sourceforge request ID the term was added in response to
6. term name
Columns are tab-delimited and can be imported into Excel for ease of reading.
New terms in biological_process ontology (190 new terms)
GO:0001957 GO:0007582 MGI D intramembranous ossification
GO:0009653
GO:0001958 GO:0007582 MGI D endochondral ossification
GO:0009653
GO:0001959 GO:0007165 MGI D regulation of cytokine and chemokine mediated signaling pathway
GO:0001960 GO:0007165 MGI D negative regulation of cytokine and chemokine mediated signaling pathway
GO:0001961 GO:0007165 MGI D positive regulation of cytokine and chemokine mediated signaling pathway
GO:0010243 GO:0009719 TAIR D 1242580 response to organic nitrogen
GO:0010244 GO:0009628 TAIR D 1242580 response to low fluence blue light
GO:0010245 GO:0007010 TAIR D 1242580 radial microtubular system formation
GO:0010246 GO:0005975 TAIR D 1242580 rhamnogalacturonan I biosynthesis
GO:0009058
GO:0010247 GO:0009628 TAIR D 1242580 phosphate ion sensing
GO:0010248 GO:0006810 TAIR D 1242580 establishment and/or maintenance of transmembrane electrochemical gradient
GO:0010249 GO:0008152 TAIR D 1242580 auxin conjugate metabolism
GO:0010250 GO:0009058 TAIR D 1242580 S-methylmethionine biosynthesis
GO:0010252 GO:0008152 TAIR D 1242580 auxin homeostasis
GO:0010253 GO:0005975 TAIR D 1242580 UDP-rhamnose biosynthesis
GO:0009058
GO:0010254 GO:0007275 TAIR D 1242580 nectary development
GO:0010255 GO:0007165 TAIR D 1242580 glucose mediated signaling
GO:0009719
GO:0010256 GO:0016043 TAIR D 1242580 endomembrane organization
GO:0010257 GO:0019538 TAIR D 1242580 NADH dehydrogenase complex assembly
GO:0010258 GO:0019538 TAIR D 1242580 NADH dehydrogenase complex (plastoquinone) assembly
GO:0031557 GO:0008219 MAH D 1246051 induction of programmed cell death in response to chemical substance
GO:0031558 GO:0008219 MAH D 1246051 induction of apoptosis in response to chemical substance
GO:0031564 GO:0006350 MAH D 1254974 transcription antitermination
GO:0031565 GO:0007049 MAH D 848399 cytokinesis checkpoint
GO:0031566 GO:0007049 MAH D 848399 cytokinesis, contractile ring maintenance
GO:0031567 GO:0007049 MAH D 848399 cell size control checkpoint
GO:0031568 GO:0007049 MAH D 848399 G1/S transition size control checkpoint
GO:0031569 GO:0007049 MAH D 848399 G2/M transition size control checkpoint
GO:0031570 GO:0007049 MAH D 848399 DNA integrity checkpoint
GO:0031571 GO:0006950 MAH D 848399 G1 DNA damage checkpoint
GO:0007049
GO:0009719
GO:0031572 GO:0006950 MAH D 848399 G2/M transition DNA damage checkpoint
GO:0007049
GO:0009719
GO:0031573 GO:0006950 MAH D 848399 intra-S DNA damage checkpoint
GO:0007049
GO:0009719
GO:0031574 GO:0006950 MAH D 848399 S-M checkpoint
GO:0007049
GO:0009719
GO:0031575 GO:0007049 MAH D 848399 G1/S transition checkpoint
GO:0031576 GO:0007049 MAH D 848399 G2/M transition checkpoint
GO:0031577 GO:0007049 MAH D 848399 spindle checkpoint
GO:0031578 GO:0007049 MAH D 848399 spindle orientation checkpoint
GO:0031579 GO:0016043 MAH D 1254214 lipid raft organization and biogenesis
GO:0031580 GO:0016043 MAH D 1254214 lipid raft distribution
GO:0043436 GO:0008152 JL D oxoacid metabolism
GO:0043437 GO:0006629 JL D butanoic acid metabolism
GO:0043438 GO:0006629 JL D acetoacetic acid metabolism
GO:0043439 GO:0006629 JL D butanoic acid biosynthesis
GO:0009058
GO:0043440 GO:0006629 JL D butanoic acid catabolism
GO:0009056
GO:0043441 GO:0006629 JL D acetoacetic acid biosynthesis
GO:0009058
GO:0043442 GO:0006629 JL D acetoacetic acid catabolism
GO:0009056
GO:0043443 GO:0008152 JL D acetone metabolism
GO:0043444 GO:0009056 JL D acetone catabolism
GO:0043445 GO:0009058 JL D acetone biosynthesis
GO:0043446 GO:0008152 JL D alkane metabolism
GO:0043447 GO:0009058 JL D alkane biosynthesis
GO:0043448 GO:0009056 JL D alkane catabolism
GO:0043449 GO:0008152 JL D alkene metabolism
GO:0043450 GO:0009058 JL D alkene biosynthesis
GO:0043451 GO:0009056 JL D alkene catabolism
GO:0043452 GO:0008152 JL D alkyne metabolism
GO:0043453 GO:0008152 JL D alkyne biosynthesis
GO:0043454 GO:0008152 JL D alkyne catabolism
GO:0043455 GO:0019748 JL D regulation of secondary metabolism
GO:0043456 GO:0005975 JL D regulation of pentose-phosphate shunt
GO:0006091
GO:0006139
GO:0009056
GO:0043457 GO:0006091 JL D regulation of cellular respiration
GO:0043458 GO:0006091 JL D ethanol biosynthesis during fermentation
GO:0009058
GO:0043459 GO:0009628 JL D 1242391 response to short exposure to lithium ion
GO:0043460 GO:0009628 JL D 1242391 response to long exposure to lithium ion
GO:0043461 GO:0019538 JL D 1245319 F-type ATPase complex assembly
GO:0043462 GO:0008150 JL D 1246736 regulation of ATPase activity
GO:0043463 GO:0005975 JL D 1250230 regulation of rhamnose catabolism
GO:0009056
GO:0043464 GO:0006091 JL D malolactic fermentation
GO:0043465 GO:0006091 JL D regulation of fermentation
GO:0043466 GO:0006091 JL D pyrimidine fermentation
GO:0006139
GO:0009056
GO:0043467 GO:0006091 JL D regulation of generation of precursor metabolites and energy
GO:0043468 GO:0005975 JL D 1250230 regulation of fucose catabolism
GO:0009056
GO:0043469 GO:0005975 JL D 1250230 regulation of D-xylose catabolism
GO:0009056
GO:0043470 GO:0005975 JL D 1250230 regulation of carbohydrate catabolism
GO:0009056
GO:0043471 GO:0005975 JL D 1250230 regulation of cellular carbohydrate catabolism
GO:0009056
GO:0043473 GO:0008150 JL D 1242580 pigmentation
GO:0043474 GO:0019748 JL D 1242580 pigment metabolism during pigmentation
GO:0043475 GO:0009605 JL D 1242580 pigment metabolism during pigment accumulation
GO:0019748
GO:0043476 GO:0009605 JL D 1242580 pigment accumulation
GO:0043477 GO:0009058 JL D 1242580 pigment biosynthesis during pigment accumulation
GO:0009605
GO:0019748
GO:0043478 GO:0009628 JL D 1242580 pigment accumulation in response to light
GO:0043479 GO:0009628 JL D 1242580 pigment accumulation in tissues in response to light
GO:0043480 GO:0009605 JL D 1242580 pigment accumulation in tissues
GO:0043481 GO:0009628 JL D 1242580 anthocyanin accumulation in tissues in response to light
GO:0043482 GO:0009605 JL D 1242580 cellular pigment accumulation
GO:0043483 GO:0006519 JL D 1242580 anthocyanin biosynthesis during anthocyanin accumulation
GO:0009058
GO:0009628
GO:0019748
GO:0043484 GO:0006139 JL D regulation of RNA splicing
GO:0043485 GO:0006810 JL D 1258074 endosome to pigment granule transport
GO:0006996
GO:0043486 GO:0006259 JL D 1254294 histone exchange
GO:0006996
GO:0043487 GO:0006139 JL D regulation of RNA stability
GO:0043488 GO:0006139 JL D regulation of mRNA stability
GO:0043489 GO:0006139 JL D RNA stabilization
GO:0048630 GO:0007275 JIC D 1247308 skeletal muscle growth
GO:0040007
GO:0048631 GO:0007275 JIC D 1247308 regulation of skeletal muscle growth
GO:0040007
GO:0048632 GO:0007275 JIC D 1247308 negative regulation of skeletal muscle growth
GO:0040007
GO:0048633 GO:0007275 JIC D 1247308 positive regulation of skeletal muscle growth
GO:0040007
GO:0048634 GO:0007275 JIC D 1247308 regulation of muscle development
GO:0048635 GO:0007275 JIC D 1247308 negative regulation of muscle development
GO:0048636 GO:0007275 JIC D 1247308 positive regulation of muscle development
GO:0048637 GO:0007275 JIC D 1247308 skeletal muscle development
GO:0048638 GO:0007275 JIC D 1247308 regulation of developmental growth
GO:0040007
GO:0048639 GO:0007275 JIC D 1247308 positive regulation of developmental growth
GO:0040007
GO:0048640 GO:0007275 JIC D 1247308 negative regulation of developmental growth
GO:0040007
GO:0048641 GO:0007275 JIC D 1247308 regulation of skeletal muscle development
GO:0048642 GO:0007275 JIC D 1247308 negative regulation of skeletal muscle development
GO:0048643 GO:0007275 JIC D 1247308 positive regulation of skeletal muscle development
GO:0048644 GO:0009653 JIC D 1247308 muscle morphogenesis
GO:0048645 GO:0009653 JIC D organ formation
GO:0048646 GO:0009653 JIC D anatomical structure formation
GO:0048647 GO:0007275 JIC D polyphenic determination
GO:0048648 GO:0007275 JIC D caste determination
GO:0048649 GO:0007275 JIC D caste determination, influence by genetic factors
GO:0048650 GO:0007275 JIC D caste determination, influence by environmental factors
GO:0007582
GO:0048651 GO:0007275 JIC D polyphenic determination, influence by environmental factors
GO:0007582
GO:0048652 GO:0007275 JIC D polyphenic determination, influence by genetic factors
GO:0048653 GO:0007275 JIC D 1247349 anther development
GO:0048654 GO:0009653 JIC D 1247349 anther morphogenesis
GO:0048655 GO:0009653 JIC D 1247349 tapetal layer morphogenesis
GO:0048656 GO:0009653 JIC D 1247349 tapetal layer formation
GO:0048657 GO:0009653 JIC D 1247349 tapetal cell differentiation
GO:0030154
GO:0048658 GO:0007275 JIC D 1247349 tapetal layer development
GO:0048659 GO:0008283 JIC D 1256745 smooth muscle cell proliferation
GO:0048660 GO:0008283 JIC D 1256745 regulation of smooth muscle cell proliferation
GO:0048661 GO:0008283 JIC D 1256745 positive regulation of smooth muscle cell proliferation
GO:0048662 GO:0008283 JIC D 1256745 negative regulation of smooth muscle cell proliferation
GO:0048663 GO:0009653 JIC D neuron fate commitment
GO:0030154
GO:0048664 GO:0009653 JIC D neuron fate determination
GO:0030154
GO:0048665 GO:0009653 JIC D neuron fate specification
GO:0030154
GO:0048666 GO:0009653 JIC D neuron development
GO:0030154
GO:0048667 GO:0009653 JIC D neuron morphogensis during differentiation
GO:0016043
GO:0030154
GO:0048668 GO:0009653 JIC D collateral sprouting
GO:0016043
GO:0030154
GO:0048669 GO:0009653 JIC D collateral sprouting in the absence of injury
GO:0016043
GO:0030154
GO:0048670 GO:0009653 JIC D regulation of collateral sprouting
GO:0016043
GO:0030154
GO:0048671 GO:0009653 JIC D negative regulation of collateral sprouting
GO:0016043
GO:0030154
GO:0048672 GO:0009653 JIC D positive regulation of collateral sprouting
GO:0016043
GO:0030154
GO:0048673 GO:0006950 JIC D collateral sprouting of intact axon (in response to injury)
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048674 GO:0006950 JIC D collateral sprouting of injured axon
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048675 GO:0009653 JIC D axon extension
GO:0016043
GO:0030154
GO:0048676 GO:0009653 JIC D axon extension during development
GO:0016043
GO:0030154
GO:0048677 GO:0006950 JIC D axon extension during regeneration
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048678 GO:0006950 JIC D response to axon injury
GO:0009605
GO:0048679 GO:0006950 JIC D regulation of axon regeneration
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048680 GO:0006950 JIC D positive regulation of axon regeneration
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048681 GO:0006950 JIC D negative regulation of axon regeneration
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048682 GO:0006950 JIC D sprouting of injured axon
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048683 GO:0006950 JIC D regulation of collateral sprouting of intact axon (in response to injury)
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048684 GO:0006950 JIC D positive regulation of collateral sprouting of intact axon (in response to injury)
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048685 GO:0006950 JIC D negative regulation of collateral sprouting of intact axon (in response to injury)
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048686 GO:0006950 JIC D regulation of sprouting of injured axon
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048687 GO:0006950 JIC D positive regulation of sprouting of injured axon
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048688 GO:0006950 JIC D negative regulation of sprouting of injured axon
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048689 GO:0006950 JIC D formation of growth cone in injured axon
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048690 GO:0006950 JIC D regulation of axon extension during regeneration
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048691 GO:0006950 JIC D positive regulation of axon extension during regeneration
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048692 GO:0006950 JIC D negative regulation of axon extension during regeneration
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048693 GO:0006950 JIC D regulation of collateral sprouting of injured axon
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048694 GO:0006950 JIC D positive regulation of collateral sprouting of injured axon
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048695 GO:0006950 JIC D negative regulation of collateral sprouting of injured axon
GO:0009605
GO:0009653
GO:0016043
GO:0030154
GO:0040007
GO:0048696 GO:0009653 JIC D regulation of collateral sprouting in the absence of injury
GO:0016043
GO:0030154
GO:0048697 GO:0009653 JIC D positive regulation of collateral sprouting in the absence of injury
GO:0016043
GO:0030154
GO:0048698 GO:0009653 JIC D negative regulation of collateral sprouting in the absence of injury
GO:0016043
GO:0030154
GO:0051531 GO:0015031 AI D 1255829 NFAT protein-nucleus import
GO:0051532 GO:0015031 AI D 1255829 regulation of NFAT protein-nucleus import
GO:0051533 GO:0015031 AI D 1255829 positive regulation of NFAT protein-nucleus import
GO:0051534 GO:0015031 AI D 1255829 negative regulation of NFAT protein-nucleus import
GO:0051541 GO:0019538 AI D 1256777 elastin metabolism
GO:0051542 GO:0006412 AI D 1256777 elastin biosynthesis
GO:0051543 GO:0006412 AI D 1256777 regulation of elastin biosynthesis
GO:0051544 GO:0006412 AI D 1256777 positive regulation of elastin biosynthesis
GO:0051545 GO:0006412 AI D 1256777 negative regulation of elastin biosynthesis
GO:0051546 GO:0007582 AI D 1256741 keratinocyte migration
GO:0007610
GO:0051547 GO:0007582 AI D 1256741 regulation of keratinocyte migration
GO:0007610
GO:0051548 GO:0007582 AI D 1256741 negative regulation of keratinocyte migration
GO:0007610
GO:0051549 GO:0007582 AI D 1256741 positive regulation of keratinocyte migration
GO:0007610
GO:0051550 GO:0006519 AI D 1250215 aurone metabolism
GO:0019748
GO:0051551 GO:0006519 AI D 1250215 aurone biosynthesis
GO:0009058
GO:0019748
GO:0051552 GO:0006519 AI D 1250215 flavone metabolism
GO:0019748
GO:0051553 GO:0006519 AI D 1250215 flavone biosynthesis
GO:0009058
GO:0019748
GO:0051554 GO:0006519 AI D 1250215 flavonol metabolism
GO:0019748
GO:0051555 GO:0006519 AI D 1250215 flavonol biosynthesis
GO:0009058
GO:0019748
GO:0051556 GO:0006519 AI D 1250215 leucoanthocyanidin metabolism
GO:0019748
GO:0051557 GO:0006519 AI D 1250215 leucoanthocyanidin biosynthesis
GO:0009058
GO:0019748
GO:0051558 GO:0006519 AI D 1250215 phlobaphene metabolism
GO:0019748
GO:0051559 GO:0006519 AI D 1250215 phlobaphene biosynthesis
GO:0009058
GO:0019748
GO:0051560 GO:0019725 AI D 1245985 mitochondrial calcium ion homeostasis
GO:0051561 GO:0019725 AI D 1245985 elevation of mitochondrial calcium ion concentration
GO:0051562 GO:0019725 AI D 1245985 reduction of mitochondrial calcium ion concentration
GO:0051563 GO:0019725 AI D 1245985 smooth endoplasmic reticulum calcium ion homeostasis
GO:0051564 GO:0019725 AI D 1245985 elevation of smooth endoplasmic reticulum calcium ion concentration
GO:0051565 GO:0019725 AI D 1245985 reduction of smooth endoplasmic reticulum calcium ion concentration
Term name changes in biological_process ontology
GO:0000390: spliceosome dissembly --> spliceosome disassembly
GO:0000391: U2-type spliceosome dissembly --> U2-type spliceosome disassembly
GO:0000392: U12-type spliceosome dissembly --> U12-type spliceosome disassembly
GO:0007204: elevation of cytoplasmic calcium ion concentration --> elevation of cytosolic calcium ion concentration
GO:0009290: cellular DNA import --> cellular DNA import during transformation
GO:0010202: response to low fluence --> response to low fluence red light
GO:0010203: response to very low fluence --> response to very low fluence red light
GO:0035193: central nervous system metamorphosis --> central nervous system remodeling (sensu Insecta)
GO:0040024: dauer larval development (sensu Nematoda) --> dauer larval development
GO:0043053: dauer entry (sensu Nematoda) --> dauer entry
GO:0043054: dauer exit (sensu Nematoda) --> dauer exit
GO:0043055: maintenance of dauer (sensu Nematoda) --> maintenance of dauer
GO:0043324: pigment metabolism during pigmentation --> pigment metabolism during developmental pigmentation
GO:0045161: ion channel clustering --> neuronal ion channel clustering
GO:0046777: autophosphorylation --> protein amino acid autophosphorylation
GO:0048066: pigmentation --> pigmentation during development
GO:0048070: regulation of pigmentation --> regulation of developmental pigmentation
GO:0051209: release of sequestered calcium ion into cytoplasm --> release of sequestered calcium ion into cytosol
GO:0051280: negative regulation of release of sequestered calcium ion into cytoplasm --> negative regulation of release of sequestered calcium ion into cytosol
GO:0051281: positive regulation of release of sequestered calcium ion into cytoplasm --> positive regulation of release of sequestered calcium ion into cytosol
GO:0051480: cytoplasmic calcium ion homeostasis --> cytosolic calcium ion homeostasis
GO:0051481: reduction of cytoplasmic calcium ion concentration --> reduction of cytosolic calcium ion concentration
GO:0051482: elevation of cytoplasmic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating) --> elevation of cytosolic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)
New definitions for biological_process ontology terms (6 new definitions)
GO:0000078, cell morphogenesis checkpoint
GO:0001502, cartilage condensation
GO:0007095, mitotic G2 checkpoint
GO:0007190, adenylate cyclase activation
GO:0009294, DNA mediated transformation
GO:0016582, non-covalent chromatin modification
New term merges in biological_process ontology
GO:0006763 has been merged into GO:0015936, coenzyme A metabolism
GO:0006764 has been merged into GO:0015937, coenzyme A biosynthesis
GO:0006765 has been merged into GO:0015938, coenzyme A catabolism
GO:0007327 has been merged into GO:0042812, pheromone catabolism
GO:0010251 has been merged into GO:0048564, photosystem I assembly
GO:0046614 has been merged into GO:0042812, pheromone catabolism
Term movements in biological_process ontology:
Terms movements under GO Slim term 'generation of precursor metabolites and energy ; GO:0006091'
- GO:0006109, regulation of carbohydrate metabolism
- GO:0006115, ethanol biosynthesis
- GO:0010110, regulation of photosynthesis, dark reaction
- GO:0043255, regulation of carbohydrate biosynthesis
- GO:0045912, negative regulation of carbohydrate metabolism
- GO:0045913, positive regulation of carbohydrate metabolism
Terms movements under GO Slim term 'response to stress ; GO:0006950'
+ GO:0007095, mitotic G2 checkpoint
+ GO:0031297, collapsed replication fork processing
+ GO:0048478, replication fork protection
Terms movements under GO Slim term 'development ; GO:0007275'
- GO:0006697, ecdysone biosynthesis
- GO:0006708, ecdysone catabolism
+ GO:0007517, muscle development
+ GO:0007519, myogenesis
+ GO:0007522, visceral muscle development
+ GO:0007523, larval visceral muscle development
+ GO:0007524, adult visceral muscle development
+ GO:0007525, somatic muscle development
+ GO:0007526, larval somatic muscle development
+ GO:0007527, adult somatic muscle development
+ GO:0007528, neuromuscular junction development
+ GO:0007529, establishment of synaptic specificity at neuromuscular junction
- GO:0007553, regulation of ecdysteroid metabolism
- GO:0007554, regulation of ecdysteroid biosynthesis
- GO:0008205, ecdysone metabolism
+ GO:0009901, anther dehiscence
+ GO:0016202, regulation of myogenesis
+ GO:0016203, muscle attachment
+ GO:0016204, determination of muscle attachment site
- GO:0035212, cell competition (sensu Metazoa)
- GO:0040008, regulation of growth
- GO:0040009, regulation of growth rate
- GO:0040010, positive regulation of growth rate
- GO:0040014, regulation of body size
- GO:0040015, negative regulation of body size
- GO:0040018, positive regulation of body size
+ GO:0043282, pharyngeal muscle development
- GO:0045456, ecdysteroid biosynthesis
+ GO:0045843, negative regulation of myogenesis
+ GO:0045844, positive regulation of myogenesis
- GO:0045926, negative regulation of growth
- GO:0045927, positive regulation of growth
- GO:0045965, negative regulation of ecdysteroid metabolism
- GO:0045966, positive regulation of ecdysteroid metabolism
- GO:0045967, negative regulation of growth rate
- GO:0045997, negative regulation of ecdysteroid biosynthesis
- GO:0045998, positive regulation of ecdysteroid biosynthesis
- GO:0046344, ecdysteroid catabolism
- GO:0046620, regulation of organ size
- GO:0046621, negative regulation of organ size
- GO:0046622, positive regulation of organ size
+ GO:0046716, muscle maintenance
+ GO:0051451, myoblast migration
Terms movements under GO Slim term 'physiological process ; GO:0007582'
- GO:0007411, axon guidance
- GO:0008045, motor axon guidance
- GO:0016198, axon choice point recognition
- GO:0016199, axon midline choice point recognition
- GO:0030516, regulation of axon extension
- GO:0030517, negative regulation of axon extension
- GO:0031290, retinal ganglion cell axon guidance
- GO:0045773, positive regulation of axon extension
Terms movements under GO Slim term 'metabolism ; GO:0008152'
- GO:0010130, anaerobic ethylbenzene catabolism
Terms movements under GO Slim term 'catabolism ; GO:0009056'
+ GO:0010130, anaerobic ethylbenzene catabolism
+ GO:0019653, purine fermentation
Terms movements under GO Slim term 'response to biotic stimulus ; GO:0009607'
- GO:0050677, positive regulation of urothelial cell proliferation
- GO:0050679, positive regulation of epithelial cell proliferation
Terms movements under GO Slim term 'morphogenesis ; GO:0009653'
+ GO:0001704, formation of primary germ layer
+ GO:0001825, blastocyst formation
+ GO:0001826, inner cell mass cell differentiation
+ GO:0001827, inner cell mass cell fate commitment
+ GO:0001829, trophectoderm cell differentiation
+ GO:0001830, trophectoderm cell fate commitment
- GO:0007517, muscle development
- GO:0007518, myoblast cell fate determination
- GO:0007519, myogenesis
- GO:0007520, myoblast fusion
- GO:0007521, muscle cell fate determination
- GO:0007522, visceral muscle development
- GO:0007523, larval visceral muscle development
- GO:0007524, adult visceral muscle development
- GO:0007525, somatic muscle development
- GO:0007526, larval somatic muscle development
- GO:0007527, adult somatic muscle development
- GO:0007528, neuromuscular junction development
- GO:0007529, establishment of synaptic specificity at neuromuscular junction
+ GO:0010234, tapetal cell fate specification
- GO:0016202, regulation of myogenesis
- GO:0016203, muscle attachment
- GO:0016204, determination of muscle attachment site
+ GO:0030182, neuron differentiation
- GO:0030239, myofibril assembly
- GO:0030240, muscle thin filament assembly
- GO:0030241, muscle thick filament assembly
- GO:0043282, pharyngeal muscle development
- GO:0045214, sarcomere organization
- GO:0045445, myoblast differentiation
- GO:0045661, regulation of myoblast differentiation
- GO:0045662, negative regulation of myoblast differentiation
- GO:0045663, positive regulation of myoblast differentiation
+ GO:0045664, regulation of neuron differentiation
+ GO:0045665, negative regulation of neuron differentiation
+ GO:0045666, positive regulation of neuron differentiation
- GO:0045843, negative regulation of myogenesis
- GO:0045844, positive regulation of myogenesis
- GO:0046716, muscle maintenance
- GO:0048625, myoblast cell fate commitment
- GO:0048626, myoblast cell fate specification
- GO:0048627, myoblast development
- GO:0048628, myoblast maturation
- GO:0051451, myoblast migration
Terms movements under GO Slim term 'response to endogenous stimulus ; GO:0009719'
+ GO:0007095, mitotic G2 checkpoint
+ GO:0031297, collapsed replication fork processing
+ GO:0048478, replication fork protection
Terms movements under GO Slim term 'cell organization and biogenesis ; GO:0016043'
+ GO:0007409, axonogenesis
+ GO:0007411, axon guidance
+ GO:0007412, axon target recognition
+ GO:0007413, axonal fasciculation
+ GO:0007414, axonal defasciculation
+ GO:0007415, defasciculation of motor neuron
+ GO:0008045, motor axon guidance
+ GO:0016198, axon choice point recognition
+ GO:0016199, axon midline choice point recognition
+ GO:0016358, dendrite morphogenesis
+ GO:0030516, regulation of axon extension
+ GO:0030517, negative regulation of axon extension
+ GO:0031103, axon regeneration
+ GO:0031104, dendrite regeneration
+ GO:0031133, regulation of axon diameter
+ GO:0031175, neurite morphogenesis
+ GO:0031290, retinal ganglion cell axon guidance
+ GO:0045773, positive regulation of axon extension
+ GO:0050770, regulation of axonogenesis
+ GO:0050771, negative regulation of axonogenesis
+ GO:0050772, positive regulation of axonogenesis
+ GO:0050773, regulation of dendrite morphogenesis
+ GO:0050774, negative regulation of dendrite morphogenesis
+ GO:0050775, positive regulation of dendrite morphogenesis
Terms movements under GO Slim term 'protein metabolism ; GO:0019538'
+ GO:0007053, male meiotic spindle assembly (sensu Metazoa)
+ GO:0007054, male meiosis I spindle assembly (sensu Metazoa)
+ GO:0007055, male meiosis II spindle assembly (sensu Metazoa)
+ GO:0007056, female meiotic spindle assembly (sensu Metazoa)
+ GO:0007057, female meiosis I spindle assembly (sensu Metazoa)
+ GO:0007058, female meiosis II spindle assembly (sensu Metazoa)
+ GO:0009971, male meiotic spindle assembly (sensu Viridiplantae)
+ GO:0010207, photosystem II assembly
+ GO:0048564, photosystem I assembly
+ GO:0051225, spindle assembly
+ GO:0051226, meiotic spindle assembly
+ GO:0051227, mitotic spindle assembly
+ GO:0051255, spindle midzone assembly
+ GO:0051256, mitotic spindle midzone assembly
+ GO:0051257, meiotic spindle midzone assembly
+ GO:0051382, kinetochore assembly
Terms movements under GO Slim term 'cell differentiation ; GO:0030154'
+ GO:0007409, axonogenesis
+ GO:0007411, axon guidance
+ GO:0007412, axon target recognition
+ GO:0007413, axonal fasciculation
+ GO:0007414, axonal defasciculation
+ GO:0007415, defasciculation of motor neuron
+ GO:0008045, motor axon guidance
+ GO:0016198, axon choice point recognition
+ GO:0016199, axon midline choice point recognition
+ GO:0016322, neuron remodeling
+ GO:0016358, dendrite morphogenesis
+ GO:0030516, regulation of axon extension
+ GO:0030517, negative regulation of axon extension
+ GO:0031103, axon regeneration
+ GO:0031104, dendrite regeneration
+ GO:0031133, regulation of axon diameter
+ GO:0031175, neurite morphogenesis
+ GO:0031290, retinal ganglion cell axon guidance
+ GO:0042055, neuron lineage restriction
+ GO:0045161, neuronal ion channel clustering
+ GO:0045162, clustering of voltage-gated sodium channels
+ GO:0045163, clustering of voltage-gated potassium channels
+ GO:0045773, positive regulation of axon extension
+ GO:0050770, regulation of axonogenesis
+ GO:0050771, negative regulation of axonogenesis
+ GO:0050772, positive regulation of axonogenesis
+ GO:0050773, regulation of dendrite morphogenesis
+ GO:0050774, negative regulation of dendrite morphogenesis
+ GO:0050775, positive regulation of dendrite morphogenesis
Terms movements under GO Slim term 'growth ; GO:0040007'
- GO:0040019, positive regulation of embryonic development
- GO:0045961, negative regulation of development, heterochronic
- GO:0045962, positive regulation of development, heterochronic
- GO:0045992, negative regulation of embryonic development
New terms in cellular_component ontology (4 new terms)
GO:0031560 GO:0005737 MAH D 1249849 bud neck polarisome
GO:0031561 GO:0005737 MAH D 1249849 bud tip polarisome
GO:0031562 GO:0005737 MAH D 1249849 hyphal tip polarisome
GO:0031563 GO:0005737 MAH D 1249849 mating projection tip polarisome
New definitions for cellular_component ontology terms (1 new definitions)
GO:0005852, eukaryotic translation initiation factor 3 complex
New terms in molecular_function ontology (15 new terms)
GO:0001962 GO:0016740 MGI D alpha-1,3-galactosyltransferase activity
GO:0031559 GO:0003824 MAH D 1247738 oxidosqualene cyclase
GO:0043472 GO:0005515 JL D 1251267 IgD binding
GO:0051525 GO:0005515 AI D 1255829 NFAT protein binding
GO:0051526 GO:0005515 AI D 1255829 NFAT1 protein binding
GO:0051527 GO:0005515 AI D 1255829 NFAT2 protein binding
GO:0051528 GO:0005515 AI D 1255829 NFAT3 protein binding
GO:0051529 GO:0005515 AI D 1255829 NFAT4 protein binding
GO:0051530 GO:0005515 AI D 1255829 NFAT5 protein binding
GO:0051535 GO:0005515 AI D 1255903 syntaxin-5 binding
GO:0051536 GO:0005488 AI D 1254951 iron-sulfur cluster binding
GO:0051537 GO:0005488 AI D 1254951 2 iron, 2 sulfur cluster binding
GO:0051538 GO:0005488 AI D 1254951 3 iron, 4 sulfur cluster binding
GO:0051539 GO:0005488 AI D 1254951 4 iron, 4 sulfur cluster binding
GO:0051540 GO:0005488 AI D 1254951 metal cluster binding
New definitions for molecular_function ontology terms (2 new definitions)
GO:0008252, nucleotidase activity
GO:0016946, cathepsin F activity
New term merges in molecular_function ontology
GO:0004429 has been merged into GO:0016303, phosphatidylinositol 3-kinase activity
GO:0004431 has been merged into GO:0016308, 1-phosphatidylinositol-4-phosphate 5-kinase activity
GO:0004440 has been merged into GO:0016316, phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity
GO:0008862 has been merged into GO:0043365, [formate-C-acetyltransferase]-activating enzyme
Term movements in molecular_function ontology:
Terms movements under GO Slim term 'catalytic activity ; GO:0003824'
- GO:0046410, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity
Terms movements under GO Slim term 'transferase activity ; GO:0016740'
+ GO:0046410, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity
SourceForge items closed this month:
SF id Resolution SF item title GO ids added, if any
1079961 Accepted query: cytokinesis checkpoint [none]
1198266 Fixed Missing synonyms [none]
1238206 Fixed hyphens in kinase activities [none]
1241950 None Terms for cellular components with multiple, alternate locat [none]
1245319 Accepted ntr: F-type ATPase complex assembly GO:0043461
1245985 Accepted cyto"solic" calcium ion homeostasis GO:0051560-51565
1246051 Accepted induction of apoptosis by drug GO:0031557 GO:0031558
1246081 Fixed mitotic G2 checkpoint [none]
1246736 Accepted ntr: regulation of ATPase activity GO:0043462
1247308 Accepted skeletal muscle growth GO:0048630-48644
1247323 Accepted update def signalosome [none]
1247327 Accepted add def eIF3 [none]
1247349 Accepted differentiation of tapetal layer GO:0048653-48658
1247738 Accepted oxidosqualene cyclase GO:0031559
1247747 Fixed definition error [none]
1249849 Accepted Rearrange terms around 'polarisome' (GO:0000133) GO:0031560-31563
1250215 Accepted new terms in flavonoid pathway GO:0051550-51559
1250230 Accepted new regulation terms GO:0043463 GO:0043468-43471
1250952 Fixed dauer (sensu Nematoda) [none]
1251058 None test request submission [none]
1251070 None test request [none]
1251267 Accepted immunoglobulin binding term GO:0043472
1251633 Fixed Duplicated name: photosystem I assembly [none]
1252636 None '-' and 'to' in GO term names [none]
1254058 Accepted mp: * kinetochore assembly/spindle assembly [none]
1254196 Accepted HDAC synonym for histone deacetylase complex [none]
1254214 Accepted ntr: lipid raft distribitution GO:0031579 GO:0031580
1254294 Accepted ntr: histone exchange GO:0043486
1254310 Rejected ntr: peptidyl lysine methylhydroxylse activity [none]
1254951 Accepted SPKW:iron-sulfur cluster binding GO:0051536-51540
1254958 Accepted development def [none]
1254974 Accepted SPKW:transcription antitermination GO:0031564
1255062 Fixed hyphenation inconsistency [none]
1255829 Accepted NFAT proteins GO:0051525-51534
1255895 Works For Me enzyme regulator terms [none]
1255903 Accepted syntaxin binding GO:0051535
1256741 Accepted keratinocyte migration GO:0051546-51549
1256745 None smooth muscle cell proliferation GO:0048659-48662
1256777 Accepted neg.reg of elastin biosynthesis GO:0051541-51545
1257389 Fixed Dodgy term definition, GO:0031566 [none]
1257641 Accepted add synonyms nuclear RNA-directed RNA polymerase complex [none]
1258074 Accepted endosome to pigment granule transport GO:0043485
1258087 Duplicate endosome to pigment granule transport [none]
1259795 Rejected PCNA query/term request [none]
1261860 Fixed Reinstatement of obsolete terms [none]
1266722 Works For Me Changing "is_a" to "part_of" or vice versa [none]
1276573 Works For Me ntr: deoxyribose phosphate lyase GO:0051566
848399 Accepted cell cycle checkpoints GO:0031565-31578
907453 Accepted mitotic spindle checkpoint [none]
Statistics:
biological_process: 10145 terms, 97.7% defined (9909 terms defined)
cellular_component: 1698 terms, 94.9% defined (1612 terms defined)
molecular_function: 7604 terms, 91.3% defined (6945 terms defined)
Total: 19447 terms, 95.0% defined (18466 terms defined)
Term errors
none