GO Monthly Release Notes for November 2004
========================
Generated on Mon Jan 24 12:50:42 2005
Files used:
gene_ontology.obo
OLD: version 3.563, 29:10:2004 13:21
NEW: version 3.634, 30:11:2004 17:59
goslim_generic
Key:
|----1----||----2-----||-3--||4||----5----||-----------6-----------|
GO:0009941 GO:0009536 TAIR D SF:575119 chloroplast envelope
(obs)
1. GO ID number
2. GO-slim term(s) that new term was added under or "obs" if the term is obsolete.
Terms with more than one GO-slim parent have further parents listed underneath the first parent.
3. Database that added term
4. indicates the existence of a definition for the term
5. the sourceforge request ID the term was added in response to
6. term name
Columns are tab-delimited and can be imported into Excel for ease of reading.
New terms in component ontology (14 new terms)
GO:0043240 GO:0005654 JL D 1046944 Fanconi anaemia nuclear complex
GO:0043245 GO:0005576 JL D 972645 extraorganismal space
GO:0043246 GO:0005764 JL D 1058774 megasome
GO:0043253 GO:0005840 JL D 1068713 chloroplast ribosome
GO:0009536
GO:0043256 GO:0005578 JL D 1035336 laminin complex
GO:0043257 GO:0005578 JL D 1035336 laminin-8
GO:0043258 GO:0005578 JL D 1035336 laminin-9
GO:0043259 GO:0005578 JL D 1035336 laminin-10
GO:0043260 GO:0005578 JL D 1035336 laminin-11
GO:0043261 GO:0005578 JL D 1035336 laminin-12
GO:0043263 GO:0005576 JL D 1072366 cellulosome
GO:0043264 GO:0005576 JL D 1035336 extracellular non-membrane-bound organelle
GO:0043265 GO:0005737 JL D 1072349 ectoplasm
GO:0051233 GO:0005856 AI D 1035336 spindle midzone
Term name changes in component ontology
GO:0000934: porous septum --> porous cell septum
GO:0000936: primary septum --> primary cell septum
GO:0005576: extracellular --> extracellular region
GO:0005607: laminin-2 complex --> laminin-2
GO:0009375: hydrogenase complex --> ferredoxin hydrogenase complex
GO:0030428: septum --> cell septum
GO:0030478: actin cap (sensu Fungi) --> actin cap
GO:0030482: actin cable (sensu Fungi) --> actin cable
GO:0042151: cnidocyst --> nematocyst
GO:0043187: septum surface --> cell septum surface
GO:0043188: septum edging --> cell septum edging
GO:0051077: secondary septum (sensu Fungi) --> secondary cell septum
New definitions for component ontology terms (4 new definitions)
GO:0008023, transcription elongation factor complex
GO:0016591, DNA-directed RNA polymerase II, holoenzyme
GO:0016592, Srb-mediator complex
GO:0016593, Cdc73/Paf1 complex
New term merges in component ontology
GO:0000134 has been merged into GO:0030427, site of polarized growth
GO:0030483 has been merged into GO:0030427, site of polarized growth
Term movements in component ontology:
Terms movements under GO Slim term 'intracellular ; GO:0005622'
+ GO:0005856, cytoskeleton
+ GO:0016442, RNA-induced silencing complex
Terms movements under GO Slim term 'nucleus ; GO:0005634'
- GO:0035101, FACT complex
Terms movements under GO Slim term 'nucleoplasm ; GO:0005654'
+ GO:0035101, FACT complex
Terms movements under GO Slim term 'cytoplasm ; GO:0005737'
- GO:0005856, cytoskeleton
+ GO:0005859, muscle myosin
+ GO:0005861, troponin complex
+ GO:0005862, muscle thin filament tropomyosin
+ GO:0005865, striated muscle thin filament
+ GO:0005950, anthranilate synthase complex
Terms movements under GO Slim term 'cytosol ; GO:0005829'
+ GO:0008303, caspase complex
Terms movements under GO Slim term 'unlocalized protein complex ; GO:0005941'
- GO:0005950, anthranilate synthase complex
- GO:0008303, caspase complex
- GO:0016442, RNA-induced silencing complex
New terms in function ontology (16 new terms)
GO:0035273 GO:0005488 FB D 1063964 phthalate binding
GO:0035274 GO:0005488 FB D 1063964 diphenyl phthalate binding
GO:0035275 GO:0005488 FB D 1063964 dibutyl phthalate binding
GO:0035276 GO:0005488 FB D 1063964 ethanol binding
GO:0043236 GO:0005515 JL D 1058794 laminin binding
GO:0043237 GO:0005515 JL D 1058794 laminin-1 binding
GO:0043238 GO:0005515 JL D 1058794 laminin-2 binding
GO:0043239 GO:0005515 JL D 1058794 laminin-4 binding
GO:0043250 GO:0005215 JL D 1067666 sodium-dependent organic anion transporter activity
GO:0043262 GO:0016787 JL D 1035336 adenosine-diphosphatase activity
GO:0050381 GO:0003824 AI D 780191 unspecific monooxygenase activity
GO:0051212 GO:0005488 AI D 1060207 vanadium ion binding
GO:0051213 GO:0003824 AI D 1060182 dioxygenase activity
GO:0051219 GO:0005515 AI D 957985 phosphoprotein binding
GO:0051268 GO:0003824 AI D 1075148 alpha-keto amide reductase activity
GO:0051269 GO:0003824 AI D 1075148 alpha-keto ester reductase activity
New obsoletions in function ontology
GO:0005514, calcium ion storage activity: represents a biological process.
Term name changes in function ontology
GO:0005476: carnitine:acyl carnitine carrier activity --> carnitine:acyl carnitine antiporter activity
GO:0009671: nitrate(chlorate):hydrogen symporter activity --> nitrate:hydrogen symporter activity
GO:0015401: urea active transporter activity --> urea:sodium symporter activity
GO:0015431: conjugate transporter activity --> glutathione S-conjugate-exporting ATPase activity
GO:0015650: lactate:hydrogen porter activity --> lactate:hydrogen symporter activity
GO:0017032: potassium:amino acid transporter activity --> potassium:amino acid symporter activity
GO:0042962: acridine:proton antiporter activity --> acridine:hydrogen antiporter activity
GO:0045289: luciferase monooxygenase activity --> luciferin monooxygenase activity
GO:0045309: phosphoprotein amino acid binding --> protein phosphorylated amino acid binding
New definitions for function ontology terms (12 new definitions)
GO:0005436, sodium:phosphate symporter activity
GO:0005514, calcium ion storage activity
GO:0008349, MAP kinase kinase kinase kinase activity
GO:0008545, JUN kinase kinase activity
GO:0015320, phosphate carrier activity
GO:0015347, sodium-independent organic anion transporter activity
GO:0015431, glutathione S-conjugate-exporting ATPase activity
GO:0015583, beta-glucoside [arbutin-salicin-cellobiose] permease activity
GO:0015650, lactate:hydrogen symporter activity
GO:0016830, carbon-carbon lyase activity
GO:0017153, sodium:dicarboxylate symporter activity
GO:0019116, hydroxy-nicotine oxidase activity
New term merges in function ontology
GO:0016224 has been merged into GO:0004602, glutathione peroxidase activity
GO:0016745 has been merged into GO:0016744, transferase activity, transferring aldehyde or ketonic groups
GO:0016952 has been merged into GO:0004096, catalase activity
GO:0016953 has been merged into GO:0004096, catalase activity
GO:0016955 has been merged into GO:0016691, chloride peroxidase activity
GO:0016956 has been merged into GO:0016691, chloride peroxidase activity
GO:0016957 has been merged into GO:0016691, chloride peroxidase activity
GO:0016958 has been merged into GO:0016691, chloride peroxidase activity
GO:0045308 has been merged into GO:0005515, protein binding
Term movements in function ontology:
Terms movements under GO Slim term 'catalytic activity ; GO:0003824'
- GO:0003832, beta-alanyl-dopamine hydrolase activity
Terms movements under GO Slim term 'protein kinase activity ; GO:0004672'
+ GO:0047696, beta-adrenergic-receptor kinase activity
+ GO:0050063, low-density-lipoprotein kinase activity
+ GO:0050254, rhodopsin kinase activity
+ GO:0050321, tau-protein kinase activity
+ GO:0050359, tropomyosin kinase activity
Terms movements under GO Slim term 'transporter activity ; GO:0005215'
+ GO:0005297, hydrogen:proline symporter activity
- GO:0005313, L-glutamate transporter activity
- GO:0005331, gamma-aminobutyric acid transporter activity
- GO:0015185, L-gamma-aminobutyric acid transporter activity
- GO:0015187, glycine transporter activity
- GO:0015327, cystine:glutamate antiporter activity
- GO:0015329, gamma-aminobutyric acid permease activity
- GO:0015495, gamma-aminobutyric acid:hydrogen symporter activity
- GO:0015501, glutamate:sodium symporter activity
+ GO:0019829, cation-transporting ATPase activity
+ GO:0042625, ATPase activity, coupled to transmembrane movement of ions
+ GO:0043225, anion-transporting ATPase activity
Terms movements under GO Slim term 'neurotransmitter transporter activity ; GO:0005326'
- GO:0005297, hydrogen:proline symporter activity
+ GO:0005313, L-glutamate transporter activity
+ GO:0005331, gamma-aminobutyric acid transporter activity
+ GO:0015185, L-gamma-aminobutyric acid transporter activity
+ GO:0015187, glycine transporter activity
+ GO:0015259, glutamate channel activity
+ GO:0015327, cystine:glutamate antiporter activity
+ GO:0015329, gamma-aminobutyric acid permease activity
+ GO:0015495, gamma-aminobutyric acid:hydrogen symporter activity
+ GO:0015501, glutamate:sodium symporter activity
Terms movements under GO Slim term 'kinase activity ; GO:0016301'
+ GO:0018720, phenol kinase activity
+ GO:0019158, mannokinase activity
+ GO:0019165, thiamin kinase activity
+ GO:0046316, gluconokinase activity
+ GO:0046404, polynucleotide 5'-hydroxyl-kinase activity
+ GO:0046522, S-methyl-5-thioribose kinase activity
+ GO:0047321, diphosphate-protein phosphotransferase activity
+ GO:0047322, [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity
+ GO:0047323, [3-methyl-2-oxobutanoate dehydrogenase (lipoamide)] kinase activity
+ GO:0047324, phosphoenolpyruvate-glycerone phosphotransferase activity
+ GO:0047325, inositol-tetrakisphosphate 1-kinase activity
+ GO:0047326, inositol-tetrakisphosphate 5-kinase activity
+ GO:0047327, glycerol-3-phosphate-glucose phosphotransferase activity
+ GO:0047328, acyl-phosphate-hexose phosphotransferase activity
+ GO:0047329, phosphoramidate-hexose phosphotransferase activity
+ GO:0047330, polyphosphate-glucose phosphotransferase activity
+ GO:0047331, diphosphate-glycerol phosphotransferase activity
+ GO:0047332, diphosphate-serine phosphotransferase activity
+ GO:0047333, dihydrostreptomycin-6-phosphate 3'-alpha-kinase activity
+ GO:0047334, diphosphate-fructose-6-phosphate 1-phosphotransferase activity
+ GO:0047336, 5-methyldeoxycytidine-5'-phosphate kinase activity
+ GO:0047506, (deoxy)adenylate kinase activity
+ GO:0047507, (deoxy)nucleoside-phosphate kinase activity
+ GO:0047590, 5-dehydro-2-deoxygluconokinase activity
+ GO:0047601, acetate kinase (diphosphate) activity
+ GO:0047620, acylglycerol kinase activity
+ GO:0047628, ADP-thymidine kinase activity
+ GO:0047633, agmatine kinase activity
+ GO:0047649, alkylglycerol kinase activity
+ GO:0047650, alkylglycerone kinase activity
+ GO:0047666, ammonia kinase activity
+ GO:0047667, AMP-thymidine kinase activity
+ GO:0047700, beta-glucoside kinase activity
+ GO:0047715, hypotaurocyamine kinase activity
+ GO:0047758, branched-chain-fatty-acid kinase activity
+ GO:0047761, butyrate kinase activity
+ GO:0047764, caldesmon kinase activity
+ GO:0047814, D-arabinokinase activity
+ GO:0047841, dehydrogluconokinase activity
+ GO:0047848, dephospho-[reductase kinase] kinase activity
+ GO:0047878, erythritol kinase activity
+ GO:0047887, farnesyl-diphosphate kinase activity
+ GO:0047900, formate kinase activity
+ GO:0047912, galacturonokinase activity
+ GO:0047931, glucosamine kinase activity
+ GO:0047933, glucose-1,6-bisphosphate synthase activity
+ GO:0047937, glucose-1-phosphate phosphodismutase activity
+ GO:0047940, glucuronokinase activity
+ GO:0047944, glutamate 1-kinase activity
+ GO:0047973, guanidinoacetate kinase activity
+ GO:0047976, hamamelose kinase activity
+ GO:0047992, hydroxylysine kinase activity
+ GO:0050059, lombricine kinase activity
+ GO:0050073, macrolide 2'-kinase activity
+ GO:0050145, nucleoside-phosphate kinase activity
+ GO:0050146, nucleoside phosphotransferase activity
+ GO:0050154, opheline kinase activity
+ GO:0050165, pantetheine kinase activity
+ GO:0050190, phosphoglucokinase activity
+ GO:0050191, phosphoglycerate kinase (GTP) activity
+ GO:0050195, phosphoribokinase activity
+ GO:0050201, fucokinase activity
+ GO:0050222, protamine kinase activity
+ GO:0050225, pseudouridine kinase activity
+ GO:0050257, riboflavin phosphotransferase activity
+ GO:0050262, ribosylnicotinamide kinase activity
+ GO:0050276, scyllo-inosamine 4-kinase activity
+ GO:0050277, sedoheptulokinase activity
+ GO:0050299, streptomycin 3''-kinase activity
+ GO:0050300, streptomycin 6-kinase activity
+ GO:0050316, T2-induced deoxynucleotide kinase activity
+ GO:0050317, tagatose kinase activity
+ GO:0050324, taurocyamine kinase activity
+ GO:0050331, thiamin-diphosphate kinase activity
+ GO:0050354, triokinase activity
+ GO:0050369, [tyrosine 3-monooxygenase] kinase activity
+ GO:0050394, viomycin kinase activity
+ GO:0050400, xylitol kinase activity
+ GO:0050405, [acetyl-CoA carboxylase] kinase activity
+ GO:0050517, inositol-hexakisphosphate kinase activity
Terms movements under GO Slim term 'transferase activity ; GO:0016740'
- GO:0018720, phenol kinase activity
- GO:0019158, mannokinase activity
- GO:0019165, thiamin kinase activity
- GO:0046316, gluconokinase activity
- GO:0046404, polynucleotide 5'-hydroxyl-kinase activity
- GO:0046522, S-methyl-5-thioribose kinase activity
- GO:0047321, diphosphate-protein phosphotransferase activity
- GO:0047322, [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity
- GO:0047323, [3-methyl-2-oxobutanoate dehydrogenase (lipoamide)] kinase activity
- GO:0047324, phosphoenolpyruvate-glycerone phosphotransferase activity
- GO:0047325, inositol-tetrakisphosphate 1-kinase activity
- GO:0047326, inositol-tetrakisphosphate 5-kinase activity
- GO:0047327, glycerol-3-phosphate-glucose phosphotransferase activity
- GO:0047328, acyl-phosphate-hexose phosphotransferase activity
- GO:0047329, phosphoramidate-hexose phosphotransferase activity
- GO:0047330, polyphosphate-glucose phosphotransferase activity
- GO:0047331, diphosphate-glycerol phosphotransferase activity
- GO:0047332, diphosphate-serine phosphotransferase activity
- GO:0047333, dihydrostreptomycin-6-phosphate 3'-alpha-kinase activity
- GO:0047334, diphosphate-fructose-6-phosphate 1-phosphotransferase activity
- GO:0047336, 5-methyldeoxycytidine-5'-phosphate kinase activity
- GO:0047506, (deoxy)adenylate kinase activity
- GO:0047507, (deoxy)nucleoside-phosphate kinase activity
- GO:0047590, 5-dehydro-2-deoxygluconokinase activity
- GO:0047601, acetate kinase (diphosphate) activity
- GO:0047620, acylglycerol kinase activity
- GO:0047628, ADP-thymidine kinase activity
- GO:0047633, agmatine kinase activity
- GO:0047649, alkylglycerol kinase activity
- GO:0047650, alkylglycerone kinase activity
- GO:0047666, ammonia kinase activity
- GO:0047667, AMP-thymidine kinase activity
- GO:0047696, beta-adrenergic-receptor kinase activity
- GO:0047700, beta-glucoside kinase activity
- GO:0047715, hypotaurocyamine kinase activity
- GO:0047758, branched-chain-fatty-acid kinase activity
- GO:0047761, butyrate kinase activity
- GO:0047764, caldesmon kinase activity
- GO:0047814, D-arabinokinase activity
- GO:0047841, dehydrogluconokinase activity
- GO:0047848, dephospho-[reductase kinase] kinase activity
- GO:0047878, erythritol kinase activity
- GO:0047887, farnesyl-diphosphate kinase activity
- GO:0047900, formate kinase activity
- GO:0047912, galacturonokinase activity
- GO:0047931, glucosamine kinase activity
- GO:0047933, glucose-1,6-bisphosphate synthase activity
- GO:0047937, glucose-1-phosphate phosphodismutase activity
- GO:0047940, glucuronokinase activity
- GO:0047944, glutamate 1-kinase activity
- GO:0047973, guanidinoacetate kinase activity
- GO:0047976, hamamelose kinase activity
- GO:0047992, hydroxylysine kinase activity
- GO:0050059, lombricine kinase activity
- GO:0050063, low-density-lipoprotein kinase activity
- GO:0050073, macrolide 2'-kinase activity
- GO:0050145, nucleoside-phosphate kinase activity
- GO:0050146, nucleoside phosphotransferase activity
- GO:0050154, opheline kinase activity
- GO:0050165, pantetheine kinase activity
- GO:0050190, phosphoglucokinase activity
- GO:0050191, phosphoglycerate kinase (GTP) activity
- GO:0050195, phosphoribokinase activity
- GO:0050201, fucokinase activity
- GO:0050222, protamine kinase activity
- GO:0050225, pseudouridine kinase activity
- GO:0050254, rhodopsin kinase activity
- GO:0050257, riboflavin phosphotransferase activity
- GO:0050262, ribosylnicotinamide kinase activity
- GO:0050276, scyllo-inosamine 4-kinase activity
- GO:0050277, sedoheptulokinase activity
- GO:0050299, streptomycin 3''-kinase activity
- GO:0050300, streptomycin 6-kinase activity
- GO:0050316, T2-induced deoxynucleotide kinase activity
- GO:0050317, tagatose kinase activity
- GO:0050321, tau-protein kinase activity
- GO:0050324, taurocyamine kinase activity
- GO:0050331, thiamin-diphosphate kinase activity
- GO:0050354, triokinase activity
- GO:0050359, tropomyosin kinase activity
- GO:0050369, [tyrosine 3-monooxygenase] kinase activity
- GO:0050394, viomycin kinase activity
- GO:0050400, xylitol kinase activity
- GO:0050405, [acetyl-CoA carboxylase] kinase activity
- GO:0050517, inositol-hexakisphosphate kinase activity
Terms movements under GO Slim term 'hydrolase activity ; GO:0016787'
+ GO:0003832, beta-alanyl-dopamine hydrolase activity
New terms in process ontology (115 new terms)
GO:0001919 GO:0007165 MGI D 1035336 regulation of receptor recycling
GO:0019538
GO:0001920 GO:0007165 MGI D 1035336 negative regulation of receptor recycling
GO:0019538
GO:0001921 GO:0007165 MGI D 1035336 positive regulation of receptor recycling
GO:0019538
GO:0001922 GO:0007582 MGI D 1035336 B-1 B-cell homeostasis
GO:0001923 GO:0009607 MGI D 1035336 B-1 B-cell differentiation
GO:0009653
GO:0030154
GO:0001924 GO:0009607 MGI D 1035336 regulation of B-1 B-cell differentiation
GO:0009653
GO:0030154
GO:0001925 GO:0009607 MGI D 1035336 negative regulation of B-1 B-cell differentiation
GO:0009653
GO:0030154
GO:0001926 GO:0009607 MGI D 1035336 positive regulation of B-1 B-cell differentiation
GO:0009653
GO:0030154
GO:0001927 GO:0006810 MGI D 1035336 exocyst assembly
GO:0019538
GO:0001928 GO:0006810 MGI D 1035336 regulation of exocyst assembly
GO:0019538
GO:0001929 GO:0006810 MGI D 1035336 negative regulation of exocyst assembly.
GO:0019538
GO:0001930 GO:0006810 MGI D 1035336 positive regulation of exocyst assembly.
GO:0019538
GO:0031047 GO:0006139 MAH D 1058993 RNA-mediated gene silencing
GO:0031048 GO:0006259 MAH D 1058993 small RNA-mediated chromatin silencing
GO:0006350
GO:0016043
GO:0040029
GO:0031049 GO:0006139 MAH D 1037129 programmed DNA elimination
GO:0031050 GO:0006139 MAH D 1037129 dsRNA fragmentation
GO:0031051 GO:0006139 MAH D 1037129 scnRNA production
GO:0031052 GO:0006139 MAH D 1037129 chromosome breakage
GO:0031053 GO:0006139 MAH D 1037129 primary microRNA processing
GO:0040029
GO:0031054 GO:0006139 MAH D 1037129 pre-microRNA processing
GO:0040029
GO:0031055 GO:0006259 MAH D 1060886 chromatin remodeling at centromere
GO:0016043
GO:0031056 GO:0006259 MAH D 1060947 regulation of histone modification
GO:0016043
GO:0031057 GO:0006259 MAH D 1060947 negative regulation of histone modification
GO:0016043
GO:0031058 GO:0006259 MAH D 1060947 positive regulation of histone modification
GO:0016043
GO:0031059 GO:0006259 MAH D 1060947 histone deacetylation at centromere
GO:0006464
GO:0016043
GO:0031060 GO:0006259 MAH D 1060947 regulation of histone methylation
GO:0006464
GO:0016043
GO:0031061 GO:0006259 MAH D 1060947 negative regulation of histone methylation
GO:0006464
GO:0016043
GO:0031062 GO:0006259 MAH D 1060947 positive regulation of histone methylation
GO:0006464
GO:0016043
GO:0031063 GO:0006259 MAH D 1060947 regulation of histone deacetylation
GO:0006464
GO:0016043
GO:0031064 GO:0006259 MAH D 1060947 negative regulation of histone deacetylation
GO:0006464
GO:0016043
GO:0031065 GO:0006259 MAH D 1060947 positive regulation of histone deacetylation
GO:0006464
GO:0016043
GO:0031066 GO:0006259 MAH D 1060947 regulation of histone deacetylation at centromere
GO:0006464
GO:0016043
GO:0031067 GO:0006259 MAH D 1060947 negative regulation of histone deacetylation at centromere
GO:0006464
GO:0016043
GO:0031068 GO:0006259 MAH D 1060947 positive regulation of histone deacetylation at centromere
GO:0006464
GO:0016043
GO:0031069 GO:0009653 MAH D 1066815 hair follicle morphogenesis
GO:0031070 GO:0006139 MAH D 1062442 intronic snoRNA processing
GO:0035270 GO:0009653 FB D 1055186 endocrine system development
GO:0035271 GO:0009653 FB D 1055186 ring gland development
GO:0035272 GO:0009653 FB D 1055186 exocrine system development
GO:0035277 GO:0009653 FB D 1035336 spiracle morphogenesis
GO:0035278 GO:0006139 FB D 1067512 miRNA-mediated gene silencing, negative regulation of translation
GO:0006412
GO:0040029
GO:0035279 GO:0006139 FB D 1067512 miRNA-mediated gene silencing, mRNA cleavage
GO:0040029
GO:0035280 GO:0006139 FB D 1067512 miRNA-mediated gene silencing, miRNA loading onto RISC
GO:0040029
GO:0035281 GO:0006139 FB D 1067512 pre-microRNA nucleus export
GO:0006810
GO:0040029
GO:0043241 GO:0019538 JL D 1049160 protein complex disassembly
GO:0043242 GO:0019538 JL D 1049160 negative regulation of protein complex disassembly
GO:0043243 GO:0019538 JL D 1049160 positive regulation of protein complex disassembly
GO:0043244 GO:0019538 JL D 1049160 regulation of protein complex disassembly
GO:0043247 GO:0006950 JL D 1058083 telomere maintenance in response to DNA damage
GO:0009719
GO:0016043
GO:0043248 GO:0019538 JL D 1063414 proteasome assembly
GO:0043249 GO:0009653 JL D 669024 erythrocyte maturation
GO:0016043
GO:0030154
GO:0043251 GO:0006811 JL D 1067666 sodium-dependent organic anion transport
GO:0043252 GO:0006811 JL D 1067666 sodium-independent organic anion transport
GO:0043254 GO:0019538 JL D 1035336 regulation of protein complex assembly
GO:0043255 GO:0005975 JL D 1035336 regulation of carbohydrate biosynthesis
GO:0006091
GO:0009058
GO:0048511 GO:0007582 JIC D 1065207 rhythmic process
GO:0048512 GO:0007582 JIC D 1065207 circadian behavior
GO:0007610
GO:0048513 GO:0007275 JIC D 1065108 organ development
GO:0048514 GO:0009653 JIC D 1065108 blood vessel morphogenesis
GO:0051204 GO:0007005 AI D 1049299 protein insertion into mitochondrial membrane
GO:0051205 GO:0016043 AI D 1049299 protein insertion into membrane
GO:0051206 GO:0008152 AI D 1043020 silicate metabolism
GO:0051207 GO:0006810 AI D 1043020 silicic acid transport
GO:0051208 GO:0019725 AI D 1058148 sequestering of calcium ion
GO:0051209 GO:0019725 AI D 1035336 release of sequestered calcium ion into cytoplasm
GO:0051210 GO:0016049 AI D 1054446 isotropic cell growth
GO:0051211 GO:0016049 AI D 1054446 anisotropic cell growth
GO:0051214 GO:0006139 AI D 1044680 RNA virus induced gene silencing
GO:0006950
GO:0009605
GO:0009607
GO:0040029
GO:0051215 GO:0006139 AI D 1044680 DNA virus induced gene silencing
GO:0006950
GO:0009605
GO:0009607
GO:0040029
GO:0051216 GO:0009653 AI D 996494 cartilage development
GO:0051217 GO:0006464 AI D 957985 molybdenum incorporation via L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide)
GO:0051218 GO:0006464 AI D 957985 tungsten incorporation via L-selenocysteinyl tungsten bis(molybdopterin guanine dinucleotide)
GO:0051220 GO:0015031 AI D 957985 cytoplasmic sequestering of protein
GO:0051221 GO:0006464 AI D 1035336 tungsten incorporation into metallo-sulfur cluster
GO:0051222 GO:0015031 AI D 1035336 positive regulation of protein transport
GO:0051223 GO:0015031 AI D 1035336 regulation of protein transport
GO:0051224 GO:0015031 AI D 1035336 negative regulation of protein transport
GO:0051225 GO:0007010 AI D 1035336 spindle assembly
GO:0051226 GO:0007010 AI D 1035336 meiotic spindle assembly
GO:0007049
GO:0051227 GO:0007010 AI D 1035336 mitotic spindle assembly
GO:0007049
GO:0051228 GO:0007010 AI D 1035336 mitotic spindle disassembly
GO:0007049
GO:0051229 GO:0007010 AI D 1035336 meiotic spindle disassembly
GO:0007049
GO:0051230 GO:0007010 AI D 1035336 spindle disassembly
GO:0051231 GO:0007010 AI D 1035336 spindle elongation
GO:0051232 GO:0007010 AI D 1035336 meiotic spindle elongation
GO:0007049
GO:0051234 GO:0007582 AI D 1035336 establishment of localization
GO:0051235 GO:0007582 AI D 1035336 maintenance of localization
GO:0051236 GO:0007582 AI D 1035336 establishment of RNA localization
GO:0051237 GO:0007582 AI D 1035336 maintenance of RNA localization
GO:0051238 GO:0007582 AI D 1035336 sequestering of metal ion
GO:0051239 GO:0007582 AI D 1035336 regulation of organismal physiological process
GO:0051240 GO:0007582 AI D 1035336 positive regulation of organismal physiological process
GO:0051241 GO:0007582 AI D 1035336 negative regulation of organismal physiological process
GO:0051242 GO:0007582 AI D 1035336 positive regulation of cellular physiological process
GO:0051243 GO:0007582 AI D 1035336 negative regulation of cellular physiological process
GO:0051244 GO:0007582 AI D 1035336 regulation of cellular physiological process
GO:0051245 GO:0006950 AI D 1035336 negative regulation of cellular defense response
GO:0009605
GO:0009607
GO:0051246 GO:0019538 AI D 1035336 regulation of protein metabolism
GO:0051247 GO:0019538 AI D 1035336 positive regulation of protein metabolism
GO:0051248 GO:0019538 AI D 1035336 negative regulation of protein metabolism
GO:0051249 GO:0009607 AI D 1035336 regulation of lymphocyte activation
GO:0051250 GO:0009607 AI D 1035336 negative regulation of lymphocyte activation
GO:0051251 GO:0009607 AI D 1035336 positive regulation of lymphocyte activation
GO:0051252 GO:0006139 AI D 1035336 regulation of RNA metabolism
GO:0051253 GO:0006139 AI D 1035336 negative regulation of RNA metabolism
GO:0051254 GO:0006139 AI D 1035336 positive regulation of RNA metabolism
GO:0051255 GO:0007010 AI D 1035336 spindle midzone assembly
GO:0051256 GO:0007010 AI D 1035336 mitotic spindle midzone assembly
GO:0007049
GO:0051257 GO:0007010 AI D 1035336 meiotic spindle midzone assembly
GO:0007049
GO:0051270 GO:0007582 AI D 1075150 regulation of cell motility
GO:0051271 GO:0007582 AI D 1075150 negative regulation of cell motility
GO:0051272 GO:0007582 AI D 1075150 positive regulation of cell motility
GO:0051273 GO:0005975 AI D 1076031 beta-glucan metabolism
GO:0051274 GO:0005975 AI D 1076031 beta-glucan biosynthesis
GO:0009058
GO:0051275 GO:0005975 AI D 1076031 beta-glucan catabolism
GO:0009056
New obsoletions in process ontology
GO:0006462, protein complex assembly, multichaperone pathway: the string was ambiguous and the original meaning of the term was hence unknown.
GO:0007122, loss of asymmetric budding: is a phenotype rather than a biological process.
GO:0007123, bud scar accumulation: is a phenotype rather than a biological process.
GO:0007150, growth pattern: the original meaning of the term is unclear, the current definition is incorrect, and it does not describe a biological process.
GO:0010194, microRNA metabolism: implies further processing of an end product rather than its production.
GO:0010195, microRNA biosynthesis: represents a process that is not known to occur.
Term name changes in process ontology
GO:0000212: meiotic spindle assembly --> meiotic spindle organization and biogenesis
GO:0000728: gene conversion at MAT locus, DNA double-strand break formation --> gene conversion at mating-type locus, DNA double-strand break formation
GO:0000734: gene conversion at MAT locus, DNA repair synthesis --> gene conversion at mating-type locus, DNA repair synthesis
GO:0001507: acetylcholine breakdown in synaptic cleft --> acetylcholine catabolism in synaptic cleft
GO:0001559: interpretation of nuclear:cytoplasmic ratio to regulate cell growth --> regulation of cell growth by detection of nuclear:cytoplasmic ratio
GO:0001560: interpretation of external signals that regulate cell growth --> regulation of cell growth by extracellular stimulus
GO:0001844: insertion of proteins into mitochondrial membranes during the induction of apoptosis --> protein insertion into mitochondrial membrane during induction of apoptosis
GO:0006880: intracellular iron ion storage --> intracellular sequestering of iron ion
GO:0006881: extracellular iron ion storage --> extracellular sequestering of iron ion
GO:0006921: disassembly of cell structures --> disassembly of cell structures during apoptosis
GO:0007051: spindle assembly --> spindle organization and biogenesis
GO:0007052: mitotic spindle assembly --> mitotic spindle organization and biogenesis
GO:0007114: budding --> cell budding
GO:0007116: regulation of budding --> regulation of cell budding
GO:0007117: bud growth --> budding cell bud growth
GO:0007118: apical bud growth --> budding cell apical bud growth
GO:0007119: isotropic bud growth --> budding cell isotropic bud growth
GO:0007120: axial budding --> axial bud site selection
GO:0007121: polar budding --> bipolar bud site selection
GO:0007300: nurse cell to ocyte transport (sensu Insecta) --> nurse cell to oocyte transport (sensu Insecta)
GO:0007531: mating-type determination --> mating type determination
GO:0007533: mating-type switching and recombination --> mating type switching and recombination
GO:0007534: gene conversion at MAT locus --> gene conversion at mating-type locus
GO:0008016: regulation of heart rate --> regulation of heart contraction rate
GO:0008298: mRNA localization, intracellular --> intracellular mRNA localization
GO:0008377: light-induced release of calcium, from internal store --> light-induced release of internally sequestered calcium ion (Ca2+)
GO:0009290: cellular DNA uptake --> cellular DNA import
GO:0016475: interpretation of nuclear:cytoplasmic ratio --> detection of nuclear:cytoplasmic ratio
GO:0018147: molybdenum incorporation via L-selenocysteinyl molybdopterin guanine dinucleotide --> molybdenum incorporation via L-selenocysteinyl molybdenum bis(molybdopterin guanine dinucleotide)
GO:0018315: molybdenum incorporation into molybdenum-sulfur cluster --> molybdenum incorporation into molybdenum-molybdopterin complex
GO:0018945: organosilicone metabolism --> organosilicon metabolism
GO:0018946: aerobic organosilicone metabolism --> aerobic organosilicon metabolism
GO:0018947: anaerobic organosilicone metabolism --> anaerobic organosilicon metabolism
GO:0030422: RNA interference, production of guide RNAs --> RNA interference, production of siRNA
GO:0030466: chromatin silencing at silent mating-type cassette (sensu Fungi) --> chromatin silencing at silent mating-type cassette
GO:0030472: mitotic spindle assembly (sensu Fungi) --> mitotic spindle organization and biogenesis in nucleus
GO:0030473: nuclear migration along microtubule --> nuclear migration, microtubule-mediated
GO:0030730: triacylglycerol storage --> sequestering of triacylglycerol
GO:0030994: primary septum hydrolysis --> primary cell septum hydrolysis
GO:0030995: septum edging hydrolysis --> cell septum edging hydrolysis
GO:0035194: RNA-mediated gene silencing --> RNA-mediated posttranscriptional gene silencing
GO:0042040: metal incorporation into metallo-pterin complex --> metal incorporation into metallo-molybdopterin complex
GO:0042042: tungsten incorporation into metallo-pterin complex --> tungsten incorporation into tungsten-molybdopterin complex
GO:0042137: neurotransmitter storage --> sequestering of neurotransmitter
GO:0045038: chloroplast thylakoid protein import --> chloroplast thylakoid membrane protein import
GO:0045048: protein-ER insertion --> protein insertion into ER membrane
GO:0045049: ER insertion by N-terminal cleaved signal sequence --> protein insertion into ER membrane by N-terminal cleaved signal sequence
GO:0045050: ER insertion by stop-transfer membrane-anchor sequence --> protein insertion into ER membrane by stop-transfer membrane-anchor sequence
GO:0045051: ER insertion by internal uncleaved signal-anchor sequence --> protein insertion into ER membrane by internal uncleaved signal-anchor sequence
GO:0045052: ER insertion by GPI attachment sequence --> protein insertion into ER membrane by GPI attachment sequence
GO:0045066: suppressor T-cell differentiation --> regulatory T-cell differentiation
GO:0045589: regulation of suppressor T-cell differentiation --> regulation of regulatory T-cell differentiation
GO:0045590: negative regulation of suppressor T-cell differentiation --> negative regulation of regulatory T-cell differentiation
GO:0045591: positive regulation of suppressor T-cell differentiation --> positive regulation of regulatory T-cell differentiation
GO:0045682: regulation of epidermal differentiation --> regulation of epidermis development
GO:0045683: negative regulation of epidermal differentiation --> negative regulation of epidermis development
GO:0045684: positive regulation of epidermal differentiation --> positive regulation of epidermis development
GO:0045781: negative regulation of budding --> negative regulation of cell budding
GO:0045782: positive regulation of budding --> positive regulation of cell budding
GO:0045822: negative regulation of heart rate --> negative regulation of heart contraction rate
GO:0045823: positive regulation of heart rate --> positive regulation of heart contraction rate
GO:0046455: organosilicone catabolism --> organosilicon catabolism
GO:0050788: sequestering of mercury ion --> sequestering of mercury
New definitions for process ontology terms (32 new definitions)
GO:0000051, urea cycle intermediate metabolism
GO:0001507, acetylcholine catabolism in synaptic cleft
GO:0006462, protein complex assembly, multichaperone pathway
GO:0006880, intracellular sequestering of iron ion
GO:0006881, extracellular sequestering of iron ion
GO:0007117, budding cell bud growth
GO:0007120, axial bud site selection
GO:0007121, bipolar bud site selection
GO:0007122, loss of asymmetric budding
GO:0007123, bud scar accumulation
GO:0007272, ionic insulation of neurons by glial cells
GO:0007299, follicle cell adhesion (sensu Insecta)
GO:0007411, axon guidance
GO:0007412, axon target recognition
GO:0008045, motor axon guidance
GO:0008377, light-induced release of internally sequestered calcium ion (Ca2+)
GO:0009290, cellular DNA import
GO:0009561, megagametophyte nuclear division
GO:0009562, megagametophyte nuclear migration
GO:0015013, heparan sulfate proteoglycan biosynthesis, linkage to polypeptide
GO:0015015, heparan sulfate proteoglycan biosynthesis, enzymatic modification
GO:0016973, poly(A)+ mRNA-nucleus export
GO:0017004, cytochrome biogenesis
GO:0017062, cytochrome bc(1) complex biogenesis
GO:0017126, nucleologenesis
GO:0019090, mitochondrial rRNA, mitochondrial export
GO:0019091, mitochondrial lrRNA, mitochondrial export
GO:0019092, mitochondrial srRNA, mitochondrial export
GO:0019093, mitochondrial RNA localization
GO:0019615, catechol catabolism, ortho-cleavage
GO:0019616, catechol catabolism, meta-cleavage
GO:0042137, sequestering of neurotransmitter
New term merges in process ontology
GO:0030605 has been merged into GO:0040001, mitotic spindle positioning or orientation
GO:0030606 has been merged into GO:0018986, mitotic spindle positioning
GO:0030607 has been merged into GO:0000132, mitotic spindle orientation
GO:0030608 has been merged into GO:0018986, mitotic spindle positioning
GO:0030609 has been merged into GO:0000132, mitotic spindle orientation
GO:0030610 has been merged into GO:0040001, mitotic spindle positioning or orientation
GO:0030918 has been merged into GO:0035196, miRNA-mediated gene silencing, production of miRNAs
GO:0042041 has been merged into GO:0018315, molybdenum incorporation into molybdenum-molybdopterin complex
GO:0048114 has been merged into GO:0030719, polar granule organization and biogenesis
GO:0048115 has been merged into GO:0007318, pole plasm protein localization
GO:0048116 has been merged into GO:0007316, pole plasm RNA localization
GO:0048117 has been merged into GO:0019095, pole plasm mitochondrial rRNA localization
GO:0048118 has been merged into GO:0019096, pole plasm mitochondrial lrRNA localization
GO:0048119 has been merged into GO:0019097, pole plasm mitochondrial srRNA localization
GO:0048120 has been merged into GO:0019094, pole plasm mRNA localization
GO:0048121 has been merged into GO:0046595, establishment of pole plasm mRNA localization
GO:0048122 has been merged into GO:0046594, maintenance of pole plasm mRNA localization
GO:0050895 has been merged into GO:0007623, circadian rhythm
Term movements in process ontology:
Terms movements under GO Slim term 'reproduction ; GO:0000003'
+ GO:0000744, karyogamy during conjugation without cellular fusion
+ GO:0000745, nuclear exchange during conjugation without cellular fusion
Terms movements under GO Slim term 'carbohydrate metabolism ; GO:0005975'
+ GO:0006110, regulation of glycolysis
+ GO:0045820, negative regulation of glycolysis
+ GO:0045821, positive regulation of glycolysis
Terms movements under GO Slim term 'energy pathways ; GO:0006091'
+ GO:0006110, regulation of glycolysis
+ GO:0010110, regulation of photosynthesis, dark reaction
+ GO:0045820, negative regulation of glycolysis
+ GO:0045821, positive regulation of glycolysis
Terms movements under GO Slim term 'amino acid and derivative metabolism ; GO:0006519'
+ GO:0001507, acetylcholine catabolism in synaptic cleft
Terms movements under GO Slim term 'transport ; GO:0006810'
+ GO:0001504, neurotransmitter uptake
+ GO:0006835, dicarboxylic acid transport
+ GO:0006842, tricarboxylic acid transport
+ GO:0006843, mitochondrial citrate transport
+ GO:0006846, acetate transport
+ GO:0006847, plasma membrane acetate transport
+ GO:0006848, pyruvate transport
+ GO:0006849, plasma membrane pyruvate transport
+ GO:0006850, mitochondrial pyruvate transport
+ GO:0009935, nutrient uptake
+ GO:0015712, hexose phosphate transport
+ GO:0015717, triose phosphate transport
+ GO:0015718, monocarboxylic acid transport
+ GO:0015719, allantoate transport
+ GO:0015721, bile acid transport
+ GO:0015722, canalicular bile acid transport
+ GO:0015723, bilirubin transport
+ GO:0015724, formate transport
+ GO:0015725, gluconate transport
+ GO:0015726, L-idonate transport
+ GO:0015727, lactate transport
+ GO:0015728, mevalonate transport
+ GO:0015729, oxaloacetate transport
+ GO:0015730, propionate transport
+ GO:0015731, 3-hydroxyphenyl propanoate transport
+ GO:0015732, prostaglandin transport
+ GO:0015733, shikimate transport
+ GO:0015734, taurine transport
+ GO:0015735, uronic acid transport
+ GO:0015736, hexuronate transport
+ GO:0015737, galacturonate transport
+ GO:0015738, glucuronate transport
+ GO:0015739, sialic acid transport
+ GO:0015740, C4-dicarboxylate transport
+ GO:0015741, fumarate transport
+ GO:0015742, alpha-ketoglutarate transport
+ GO:0015743, malate transport
+ GO:0015744, succinate transport
+ GO:0015745, tartrate transport
+ GO:0015746, citrate transport
+ GO:0015747, urate transport
+ GO:0019090, mitochondrial rRNA, mitochondrial export
+ GO:0019091, mitochondrial lrRNA, mitochondrial export
+ GO:0019092, mitochondrial srRNA, mitochondrial export
+ GO:0019532, oxalate transport
+ GO:0042889, 3-phenylpropionic acid transport
- GO:0043004, cytoplasmic sequestering of CFTR protein
- GO:0043181, vacuolar sequestering
Terms movements under GO Slim term 'ion transport ; GO:0006811'
- GO:0006835, dicarboxylic acid transport
- GO:0006842, tricarboxylic acid transport
- GO:0006843, mitochondrial citrate transport
- GO:0006846, acetate transport
- GO:0006847, plasma membrane acetate transport
- GO:0006848, pyruvate transport
- GO:0006849, plasma membrane pyruvate transport
- GO:0006850, mitochondrial pyruvate transport
- GO:0015712, hexose phosphate transport
- GO:0015717, triose phosphate transport
- GO:0015718, monocarboxylic acid transport
- GO:0015719, allantoate transport
- GO:0015721, bile acid transport
- GO:0015722, canalicular bile acid transport
- GO:0015723, bilirubin transport
- GO:0015724, formate transport
- GO:0015725, gluconate transport
- GO:0015726, L-idonate transport
- GO:0015727, lactate transport
- GO:0015728, mevalonate transport
- GO:0015729, oxaloacetate transport
- GO:0015730, propionate transport
- GO:0015731, 3-hydroxyphenyl propanoate transport
- GO:0015732, prostaglandin transport
- GO:0015733, shikimate transport
- GO:0015734, taurine transport
- GO:0015735, uronic acid transport
- GO:0015736, hexuronate transport
- GO:0015737, galacturonate transport
- GO:0015738, glucuronate transport
- GO:0015739, sialic acid transport
- GO:0015740, C4-dicarboxylate transport
- GO:0015741, fumarate transport
- GO:0015742, alpha-ketoglutarate transport
- GO:0015743, malate transport
- GO:0015744, succinate transport
- GO:0015745, tartrate transport
- GO:0015746, citrate transport
- GO:0015747, urate transport
- GO:0019532, oxalate transport
- GO:0042889, 3-phenylpropionic acid transport
- GO:0043182, vacuolar sequestering of sodium ion
Terms movements under GO Slim term 'response to stress ; GO:0006950'
+ GO:0000706, meiotic DNA double-strand break processing
+ GO:0000708, meiotic strand invasion
+ GO:0000710, meiotic mismatch repair
+ GO:0000713, meiotic heteroduplex formation
+ GO:0000714, meiotic strand displacement
- GO:0000722, telomerase-independent telomere maintenance
- GO:0000723, telomere maintenance
+ GO:0001788, antibody-dependent cellular cytotoxicity
+ GO:0001813, regulation of antibody-dependent cellular cytotoxicity
+ GO:0001814, negative regulation of antibody-dependent cellular cytotoxicity
+ GO:0001815, positive regulation of antibody-dependent cellular cytotoxicity
- GO:0007004, telomerase-dependent telomere maintenance
- GO:0016233, telomere capping
- GO:0048239, negative regulation of telomeric recombination at telomere
Terms movements under GO Slim term 'organelle organization and biogenesis ; GO:0006996'
+ GO:0000027, ribosomal large subunit assembly and maintenance
+ GO:0000028, ribosomal small subunit assembly and maintenance
+ GO:0000046, autophagic vacuole fusion
+ GO:0000054, ribosome-nucleus export
+ GO:0000055, ribosomal large subunit-nucleus export
+ GO:0000056, ribosomal small subunit-nucleus export
- GO:0001765, lipid raft formation
- GO:0001766, lipid raft polarization
- GO:0001778, plasma membrane repair
+ GO:0006364, rRNA processing
+ GO:0006365, 35S primary transcript processing
- GO:0007009, plasma membrane organization and biogenesis
+ GO:0007046, ribosome biogenesis
- GO:0009663, plasmodesma organization and biogenesis
- GO:0017121, phospholipid scrambling
+ GO:0030489, processing of 27S pre-rRNA
+ GO:0030490, processing of 20S pre-rRNA
+ GO:0042254, ribosome biogenesis and assembly
+ GO:0042255, ribosome assembly
+ GO:0042256, mature ribosome assembly
+ GO:0042257, ribosomal subunit assembly
+ GO:0042273, ribosomal large subunit biogenesis
+ GO:0042274, ribosomal small subunit biogenesis
- GO:0043181, vacuolar sequestering
- GO:0043182, vacuolar sequestering of sodium ion
+ GO:0045048, protein insertion into ER membrane
+ GO:0045049, protein insertion into ER membrane by N-terminal cleaved signal sequence
+ GO:0045050, protein insertion into ER membrane by stop-transfer membrane-anchor sequence
+ GO:0045051, protein insertion into ER membrane by internal uncleaved signal-anchor sequence
+ GO:0045052, protein insertion into ER membrane by GPI attachment sequence
- GO:0045112, integrin biosynthesis
- GO:0045113, regulation of integrin biosynthesis
- GO:0045114, beta 2 integrin biosynthesis
- GO:0045115, regulation of beta 2 integrin biosynthesis
- GO:0045332, phospholipid translocation
- GO:0045720, negative regulation of integrin biosynthesis
- GO:0045726, positive regulation of integrin biosynthesis
- GO:0045774, negative regulation of beta 2 integrin biosynthesis
- GO:0045775, positive regulation of beta 2 integrin biosynthesis
Terms movements under GO Slim term 'mitochondrion organization and biogenesis ; GO:0007005'
+ GO:0001844, protein insertion into mitochondrial membrane during induction of apoptosis
Terms movements under GO Slim term 'cytoskeleton organization and biogenesis ; GO:0007010'
+ GO:0007120, axial bud site selection
+ GO:0007121, bipolar bud site selection
Terms movements under GO Slim term 'cytoplasm organization and biogenesis ; GO:0007028'
- GO:0006996, organelle organization and biogenesis
+ GO:0009663, plasmodesma organization and biogenesis
Terms movements under GO Slim term 'cell cycle ; GO:0007049'
- GO:0007051, spindle organization and biogenesis
+ GO:0009561, megagametophyte nuclear division
- GO:0030953, astral microtubule organization and biogenesis
- GO:0030954, astral microtubule nucleation
- GO:0043146, spindle stabilization
Terms movements under GO Slim term 'cell communication ; GO:0007154'
+ GO:0007299, follicle cell adhesion (sensu Insecta)
Terms movements under GO Slim term 'signal transduction ; GO:0007165'
+ GO:0042552, myelination
Terms movements under GO Slim term 'cell-cell signaling ; GO:0007267'
+ GO:0042552, myelination
Terms movements under GO Slim term 'development ; GO:0007275'
+ GO:0000706, meiotic DNA double-strand break processing
+ GO:0000708, meiotic strand invasion
+ GO:0000713, meiotic heteroduplex formation
+ GO:0001308, loss of chromatin silencing during replicative cell aging
+ GO:0001568, blood vessel development
- GO:0040029, regulation of gene expression, epigenetic
- GO:0048444, floral organ morphogenesis
- GO:0048449, floral organ formation
- GO:0048450, floral organ structural organization
Terms movements under GO Slim term 'physiological process ; GO:0007582'
- GO:0000046, autophagic vacuole fusion
- GO:0001504, neurotransmitter uptake
- GO:0001507, acetylcholine catabolism in synaptic cleft
+ GO:0006621, protein-ER retention
+ GO:0007622, rhythmic behavior
+ GO:0007623, circadian rhythm
+ GO:0007624, ultradian rhythm
+ GO:0008062, eclosion rhythm
+ GO:0009649, entrainment of circadian clock
- GO:0009935, nutrient uptake
- GO:0019090, mitochondrial rRNA, mitochondrial export
- GO:0019091, mitochondrial lrRNA, mitochondrial export
- GO:0019092, mitochondrial srRNA, mitochondrial export
+ GO:0042552, myelination
+ GO:0042752, regulation of circadian rhythm
+ GO:0042753, positive regulation of circadian rhythm
+ GO:0042754, negative regulation of circadian rhythm
+ GO:0043181, vacuolar sequestering
+ GO:0045053, protein-Golgi retention
+ GO:0045475, locomotor rhythm
Terms movements under GO Slim term 'behavior ; GO:0007610'
- GO:0007623, circadian rhythm
- GO:0007624, ultradian rhythm
- GO:0009649, entrainment of circadian clock
- GO:0042752, regulation of circadian rhythm
- GO:0042753, positive regulation of circadian rhythm
- GO:0042754, negative regulation of circadian rhythm
- GO:0043153, entrainment of circadian clock by photoperiod
Terms movements under GO Slim term 'biological_process ; GO:0008150'
+ GO:0040029, regulation of gene expression, epigenetic
Terms movements under GO Slim term 'cell growth and/or maintenance ; GO:0008151'
- GO:0007120, axial bud site selection
- GO:0007121, bipolar bud site selection
Terms movements under GO Slim term 'metabolism ; GO:0008152'
- GO:0006085, acetyl-CoA biosynthesis
- GO:0006086, acetyl-CoA biosynthesis from pyruvate
- GO:0006779, porphyrin biosynthesis
- GO:0006780, uroporphyrinogen III biosynthesis
- GO:0006781, succinyl-CoA pathway
- GO:0006787, porphyrin catabolism
- GO:0006788, heme oxidation
- GO:0006789, bilirubin conjugation
- GO:0008064, regulation of actin polymerization and/or depolymerization
- GO:0008154, actin polymerization and/or depolymerization
- GO:0010024, phytochromobilin biosynthesis
- GO:0010125, mycothiol biosynthesis
- GO:0019290, siderochrome biosynthesis
- GO:0019427, acetyl-CoA biosynthesis from acetate
- GO:0019431, acetyl-CoA biosynthesis from ethanol
- GO:0019539, siderochrome biosynthesis from hydroxamic acid
- GO:0019687, pyruvate biosynthesis from acetate
- GO:0030044, actin filament stabilization
- GO:0030045, actin filament destabilization
- GO:0030634, carbon fixation by acetyl-CoA pathway
- GO:0042744, hydrogen peroxide catabolism
- GO:0042858, chrysobactin biosynthesis
- GO:0042859, chrysobactin catabolism
- GO:0042861, achromobactin biosynthesis
- GO:0042862, achromobactin catabolism
- GO:0042864, pyochelin biosynthesis
- GO:0042865, pyochelin catabolism
- GO:0045105, intermediate filament polymerization and/or depolymerization
- GO:0045108, regulation of intermediate filament polymerization and/or depolymerization
- GO:0046140, corrin biosynthesis
- GO:0046141, corrin catabolism
- GO:0046214, enterobactin catabolism
- GO:0046215, siderochrome catabolism
- GO:0046356, acetyl-CoA catabolism
- GO:0050665, hydrogen peroxide biosynthesis
- GO:0050899, nitrile catabolism
- GO:0051016, barbed-end actin filament capping
- GO:0051144, propanediol catabolism
Terms movements under GO Slim term 'cell proliferation ; GO:0008283'
+ GO:0007120, axial bud site selection
+ GO:0007121, bipolar bud site selection
Terms movements under GO Slim term 'catabolism ; GO:0009056'
+ GO:0000706, meiotic DNA double-strand break processing
+ GO:0001507, acetylcholine catabolism in synaptic cleft
+ GO:0006787, porphyrin catabolism
+ GO:0006788, heme oxidation
+ GO:0006789, bilirubin conjugation
+ GO:0042744, hydrogen peroxide catabolism
+ GO:0042859, chrysobactin catabolism
+ GO:0042862, achromobactin catabolism
+ GO:0042865, pyochelin catabolism
+ GO:0046141, corrin catabolism
+ GO:0046214, enterobactin catabolism
+ GO:0046215, siderochrome catabolism
+ GO:0046356, acetyl-CoA catabolism
+ GO:0050899, nitrile catabolism
+ GO:0051144, propanediol catabolism
Terms movements under GO Slim term 'biosynthesis ; GO:0009058'
+ GO:0006085, acetyl-CoA biosynthesis
+ GO:0006086, acetyl-CoA biosynthesis from pyruvate
+ GO:0006779, porphyrin biosynthesis
+ GO:0006780, uroporphyrinogen III biosynthesis
+ GO:0006781, succinyl-CoA pathway
+ GO:0010024, phytochromobilin biosynthesis
+ GO:0010125, mycothiol biosynthesis
+ GO:0019290, siderochrome biosynthesis
+ GO:0019427, acetyl-CoA biosynthesis from acetate
+ GO:0019431, acetyl-CoA biosynthesis from ethanol
+ GO:0019539, siderochrome biosynthesis from hydroxamic acid
+ GO:0019687, pyruvate biosynthesis from acetate
+ GO:0030634, carbon fixation by acetyl-CoA pathway
- GO:0035196, miRNA-mediated gene silencing, production of miRNAs
+ GO:0042858, chrysobactin biosynthesis
+ GO:0042861, achromobactin biosynthesis
+ GO:0042864, pyochelin biosynthesis
+ GO:0046140, corrin biosynthesis
+ GO:0050665, hydrogen peroxide biosynthesis
+ GO:0051070, galactomannan biosynthesis
Terms movements under GO Slim term 'response to external stimulus ; GO:0009605'
+ GO:0001788, antibody-dependent cellular cytotoxicity
+ GO:0001813, regulation of antibody-dependent cellular cytotoxicity
+ GO:0001814, negative regulation of antibody-dependent cellular cytotoxicity
+ GO:0001815, positive regulation of antibody-dependent cellular cytotoxicity
Terms movements under GO Slim term 'response to biotic stimulus ; GO:0009607'
+ GO:0001788, antibody-dependent cellular cytotoxicity
+ GO:0001813, regulation of antibody-dependent cellular cytotoxicity
+ GO:0001814, negative regulation of antibody-dependent cellular cytotoxicity
+ GO:0001815, positive regulation of antibody-dependent cellular cytotoxicity
Terms movements under GO Slim term 'morphogenesis ; GO:0009653'
- GO:0001402, signal transduction during filamentous growth
- GO:0001403, invasive growth (sensu Saccharomyces)
- GO:0001568, blood vessel development
+ GO:0007120, axial bud site selection
+ GO:0007121, bipolar bud site selection
- GO:0007124, pseudohyphal growth
+ GO:0007272, ionic insulation of neurons by glial cells
- GO:0030447, filamentous growth
- GO:0030448, hyphal growth
- GO:0045311, filamentous growth in response to pheromones
+ GO:0048444, floral organ morphogenesis
+ GO:0048449, floral organ formation
+ GO:0048450, floral organ structural organization
Terms movements under GO Slim term 'response to endogenous stimulus ; GO:0009719'
+ GO:0000706, meiotic DNA double-strand break processing
+ GO:0000708, meiotic strand invasion
+ GO:0000710, meiotic mismatch repair
+ GO:0000713, meiotic heteroduplex formation
+ GO:0000714, meiotic strand displacement
- GO:0000722, telomerase-independent telomere maintenance
- GO:0000723, telomere maintenance
+ GO:0001559, regulation of cell growth by detection of nuclear:cytoplasmic ratio
- GO:0007004, telomerase-dependent telomere maintenance
- GO:0016233, telomere capping
+ GO:0016475, detection of nuclear:cytoplasmic ratio
- GO:0048239, negative regulation of telomeric recombination at telomere
Terms movements under GO Slim term 'protein transport ; GO:0015031'
- GO:0006621, protein-ER retention
+ GO:0043004, cytoplasmic sequestering of CFTR protein
- GO:0045048, protein insertion into ER membrane
- GO:0045049, protein insertion into ER membrane by N-terminal cleaved signal sequence
- GO:0045050, protein insertion into ER membrane by stop-transfer membrane-anchor sequence
- GO:0045051, protein insertion into ER membrane by internal uncleaved signal-anchor sequence
- GO:0045052, protein insertion into ER membrane by GPI attachment sequence
- GO:0045053, protein-Golgi retention
Terms movements under GO Slim term 'cell organization and biogenesis ; GO:0016043'
- GO:0001402, signal transduction during filamentous growth
- GO:0001403, invasive growth (sensu Saccharomyces)
+ GO:0001765, lipid raft formation
+ GO:0001766, lipid raft polarization
+ GO:0001778, plasma membrane repair
+ GO:0006996, organelle organization and biogenesis
+ GO:0007009, plasma membrane organization and biogenesis
- GO:0007124, pseudohyphal growth
+ GO:0009562, megagametophyte nuclear migration
+ GO:0017121, phospholipid scrambling
- GO:0030447, filamentous growth
- GO:0030448, hyphal growth
+ GO:0045112, integrin biosynthesis
+ GO:0045113, regulation of integrin biosynthesis
+ GO:0045114, beta 2 integrin biosynthesis
+ GO:0045115, regulation of beta 2 integrin biosynthesis
- GO:0045311, filamentous growth in response to pheromones
+ GO:0045332, phospholipid translocation
+ GO:0045720, negative regulation of integrin biosynthesis
+ GO:0045726, positive regulation of integrin biosynthesis
+ GO:0045774, negative regulation of beta 2 integrin biosynthesis
+ GO:0045775, positive regulation of beta 2 integrin biosynthesis
Terms movements under GO Slim term 'protein metabolism ; GO:0019538'
+ GO:0000027, ribosomal large subunit assembly and maintenance
+ GO:0000028, ribosomal small subunit assembly and maintenance
+ GO:0008064, regulation of actin polymerization and/or depolymerization
+ GO:0008154, actin polymerization and/or depolymerization
- GO:0020028, hemoglobin import
+ GO:0030044, actin filament stabilization
+ GO:0030045, actin filament destabilization
+ GO:0042255, ribosome assembly
+ GO:0042256, mature ribosome assembly
+ GO:0042257, ribosomal subunit assembly
+ GO:0045105, intermediate filament polymerization and/or depolymerization
+ GO:0045108, regulation of intermediate filament polymerization and/or depolymerization
+ GO:0051016, barbed-end actin filament capping
Terms movements under GO Slim term 'cell homeostasis ; GO:0019725'
+ GO:0008377, light-induced release of internally sequestered calcium ion (Ca2+)
Terms movements under GO Slim term 'cell differentiation ; GO:0030154'
+ GO:0007272, ionic insulation of neurons by glial cells
Terms movements under GO Slim term 'growth ; GO:0040007'
+ GO:0008582, regulation of synaptic growth at neuromuscular junction
+ GO:0042062, long-term strengthening of neuromuscular junction
+ GO:0042065, glial growth
+ GO:0042066, perineurial glial growth
+ GO:0045886, negative regulation of synaptic growth at neuromuscular junction
+ GO:0045887, positive regulation of synaptic growth at neuromuscular junction
+ GO:0051124, synaptic growth at neuromuscular junction
SourceForge items closed this month:
SF id Resolution SF item title GO ids added, if any
1000127 Fixed JNKs/MAPKs [none]
1000168 Fixed missing relationships - obol [none]
1004045 Rejected ionotropic/metabotropic glutamate receptors GO:0035235
1004592 Fixed query about transcription elongation FACT complex [none]
1012991 Duplicate plasminogen activation [none]
1024313 Accepted ntr: spindle midzone GO:0051233 GO:0051255-51257
1024533 None exocyst assembly GO:0001927-01930
1024565 Accepted calcium mobilization GO:0051208-51209
1031928 Later plastid envelope [none]
1036214 Fixed sensu Insecta pole plasm localization terms [none]
1037129 Accepted Many RNAi-related term/structure changes; new ciliate terms GO:0031047-31054
1041433 Fixed Growth pattern or patterned growth [none]
1043020 Works For Me New species metabolism terms GO:0051206-51207
1044680 Accepted DNA VIGS/RNA VIGS term addition GO:0051214-51215
1046944 Accepted Fanconi anaemia complex IntAct ID EBI-396822 GO:0043240
1049160 Accepted Complex formation/degradation GO:0043241-43244
1049299 Fixed Membrane insertion proteins GO:0051204-51205
1052915 Fixed GO:0042555: MCM Complex, parentage suggestion [none]
1053708 Fixed Merge GO:0016745 into GO:0016744 [none]
1054446 Fixed isotropic growth GO:0051210-51211
1055186 Accepted endocrine system development: new term request GO:0035270-35272
1055411 Works For Me ntr : polarized growth ? [none]
1055922 Accepted budding node [none]
1058083 Fixed inc parent telomere maintenance GO:0043247
1058148 Fixed Obsoletion: 'calcium ion storage activity' + comments GO:0051208
1058152 Fixed query nuclear migration along microtubules [none]
1058157 Fixed dynactin complexGO:0005869 [none]
1058743 Fixed juxtamembrane [none]
1058774 Accepted megasome GO:0043246
1058794 Accepted laminin binding terms GO:0043236-43239
1058929 Accepted septum surface; GO:0043187 [none]
1058993 Fixed queries RNA-mediated gene silencing GO:0031047-31048
1059582 Fixed New obol missing relationships [none]
1059599 Fixed unneeded sensu Fungi terms [none]
1060114 Fixed 'interpretation' terms for renaming (GO:0016475, GO:00015xx) [none]
1060182 Fixed monooxygenases and dioxygenases GO:0050381 GO:0051213
1060207 Accepted Vanadium ion binding GO:0051212
1060225 Fixed children of chloride peroxidase ; GO:0016691 [none]
1060886 Accepted NTR: chromatin remodeling at centromere GO:0031055
1060947 Accepted new children of histon modification various GO:0031056-31068
1061167 Accepted phosphoprotein binding GO:0051219
1062410 Invalid regulation of CDC42 GTPase and children [none]
1062442 Accepted ntr : intronic snoRNA processing GO:0031070
1063414 Accepted Proteasome maturation- new term in Process GO:0043248
1063729 Fixed ntr: replication licencing [none]
1063964 Accepted ethanol binding AND phthalate binding new terms GO:0035273-35276
1064419 Rejected missing parent phosphoserine phosphatase activity [none]
1064460 Fixed telomere maintenence/centromere maintenance [none]
1064813 Rejected merge GO:50519 and GO:8897 [none]
1065108 Accepted blood vessel development GO:0048513-48514
1065207 Accepted rhythmic behavior GO:0048511-48512
1066815 Accepted hair follicle morphogenesis GO:0031069
1067512 Accepted miRNA gene silencing- some new terms and some tweaks GO:0035278-35281
1067666 Accepted Sodium-dependent organic anion transporter activity (related GO:0043250-43252
1068713 Accepted Chloroplast ribosome GO:0043253
1068964 Fixed inflammatory response parentage [none]
1069327 None Fluorescence and luminescence [none]
1070505 Accepted regulatory T cell differentiation [none]
1071028 Fixed Transport activity: new is-a links suggested by GONG [none]
1071753 Fixed quick budding [none]
1072349 Accepted ectoplasm GO:0043265
1072366 Accepted cellulosome GO:0043263
1072566 Fixed microtubules: TPV? [none]
1073767 Fixed query MAT locus [none]
1075148 Accepted query: alpha-keto amide reductase GO:0051268-51269
1075150 Accepted ntr: regulation of cell motility GO:0051270-51272
1075895 Works For Me query geranylgeranyltransferase activity [none]
1076065 Fixed Transport activity 2: new is-a links suggested by GONG [none]
669024 Accepted heterocyst formation/maturation GO:0043158 GO:0043249
820517 Fixed Cdc73/Paf1 complex incorrect parentage? [none]
895787 Fixed viral parasite terms relationship to host [none]
900600 Fixed cell killing [none]
957760 Out of Date SO vs. GO [none]
957985 Accepted cytoplasmic sequestering of a protein GO:0051217-51220
960167 Out of Date Terms with missing is_a parents [none]
972645 Fixed extracellular space GO:0043245
990247 Accepted organ morphogenesis terms [none]
996494 Accepted Cartilage matrix metabolism GO:0051216
Statistics:
component: 1501 terms, 92.0% defined (1381 terms defined)
function: 7443 terms, 89.6% defined (6671 terms defined)
process: 9154 terms, 95.9% defined (8777 terms defined)
Total: 18098 terms, 93.0% defined (16829 terms defined)
Term errors
GO:0004497, monooxygenase activity
- secondary ID GO:0050381 lost