GO Monthly Release Notes for October 2003
========================
Generated on Fri Nov 7 11:36:47 2003
Files used:
component old: 2.399 new: 2.411
function old: 2.860 new: 2.893
process old: 2.953 new: 2.1000
definitions old: 2.1417 new: 2.1483
GO Slim: Generic.0208
Key:
|----1----||----2-----||-3--||4||----5----||-----------6-----------|
GO:0009941 GO:0009536 TAIR D SF:575119 chloroplast envelope
(obs)
1. GO ID number
2. GO-slim term(s) that new term was added under or "obs" if the term is obsolete.
Terms with more than one GO-slim parent have further parents listed underneath the first parent.
3. Database that added term
4. indicates the existence of a definition for the term
5. the sourceforge request ID the term was added in response to
6. term name
Columns are tab-delimited and can be imported into Excel for ease of reading.
New terms in component ontology (10 new terms)
GO:0010168 GO:0005737 TAIR D 829247 ER body
GO:0010169 GO:0005737 TAIR D 829247 myrosinase complex
GO:0035030 GO:0005829 FB D 796593 phosphoinositide 3-kinase complex, class IA
GO:0035031 GO:0005829 FB D 796593 phosphoinositide 3-kinase complex, class IB
GO:0035032 GO:0005829 FB D 796593 phosphoinositide 3-kinase complex, class III
GO:0042995 GO:0005623 JL D 796597 cell projection
GO:0043005 GO:0005623 JL D 796597 neuronal cell projection
GO:0043020 GO:0005623 JL D 819849 NADPH oxidase complex
GO:0005886
GO:0043025 GO:0005623 JL D 782690 cell body
GO:0048269 GO:0005622 JIC D 824827 methionine adenosyltransferase complex
Term name changes in component ontology
GO:0005942: 1-phosphatidylinositol 3-kinase complex --> phosphoinositide 3-kinase complex
New definitions for component ontology terms (2 new definitions)
GO:0005845, mRNA cap complex
GO:0005942, phosphoinositide 3-kinase complex
Term movements in component ontology:
Terms movements under GO Slim term 'intracellular ; GO:0005622'
+ GO:0005845, mRNA cap complex
Terms movements under GO Slim term 'cytoplasm ; GO:0005737'
- GO:0005845, mRNA cap complex
New terms in function ontology (55 new terms)
GO:0035033 GO:0030234 FB D 816681 histone deacetylase regulator activity
GO:0035034 GO:0030234 FB D 816681 histone acetyltransferase regulator activity
GO:0035035 GO:0005515 FB D 816681 histone acetyltransferase binding
GO:0035049 GO:0003824 FB D 824793 juvenile hormone acid methyltransferase activity
GO:0042970 GO:0005215 JL D homoserine transporter activity
GO:0042971 GO:0005215 JL D lactone transporter activity
GO:0042972 GO:0003824 JL D 818809 licheninase activity
GO:0042973 GO:0003824 JL D 818802 glucan endo-1,3-beta-D-glucosidase activity
GO:0042974 GO:0005102 JL D 803125 retinoic acid receptor binding
GO:0042975 GO:0005102 JL D 803125 peroxisome proliferator activated receptor binding
GO:0042978 GO:0030234 JL D 810591 ornithine decarboxylase activator activity
GO:0042979 GO:0030234 JL D 810591 ornithine decarboxylase regulator activity
GO:0042980 GO:0005515 JL D 797250 CFTR binding
GO:0042988 GO:0005515 JL D 795430 X11-like protein binding
GO:0043008 GO:0005515 JL D 818546 ATP-dependent protein binding
GO:0043014 GO:0008092 JL D 828219 alpha-tubulin binding
GO:0043015 GO:0008092 JL D 828219 gamma-tubulin binding
GO:0043021 GO:0005488 JL D 819239 ribonucleoprotein binding
GO:0043022 GO:0005488 JL D 819239 ribosome binding
GO:0043023 GO:0005488 JL D 819239 ribosomal large subunit binding
GO:0043024 GO:0005488 JL D 819239 ribosomal small subunit binding
GO:0043027 GO:0016329 JL D 833035 caspase inhibitor activity
GO:0030234
GO:0043028 GO:0030234 JL D 833035 caspase regulator activity
GO:0048270 GO:0030234 JIC D 824825 methionine adenosyltransferase regulator activity
GO:0048273 GO:0005515 JIC D 824121 mitogen-activated protein kinase p38 binding
GO:0050542 GO:0008289 AI D 811230 icosanoid binding
GO:0050543 GO:0008289 AI D 811230 icosatetraenoic acid binding
GO:0050544 GO:0008289 AI D 811230 arachidonic acid binding
GO:0050646 GO:0008289 AI D 811230 5-oxo-6E,8Z,11Z,14Z-icosatetraenoic acid binding
GO:0050647 GO:0008289 AI D 811230 5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding
GO:0050648 GO:0008289 AI D 811230 5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding
GO:0050649 GO:0003824 AI D 817121 testosterone 6-beta-hydroxylase activity
GO:0050656 GO:0000166 AI D 819297 3'-phosphoadenosine 5'-phosphosulfate binding
GO:0050659 GO:0003824 AI D 819250 N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity
GO:0050660 GO:0005488 AI D 819849 FAD binding
GO:0050661 GO:0005488 AI D 819849 NADPH binding
GO:0050662 GO:0005488 AI D 819849 coenzyme binding
GO:0050664 GO:0003824 AI D oxidoreductase activity, acting on NADH or NADPH, with oxygen as acceptor
GO:0050681 GO:0005102 AI D 811151 androgen receptor binding
GO:0050682 GO:0005515 AI D 816622 AF-2 domain binding
GO:0050683 GO:0005515 AI D 816622 AF-1 domain binding
GO:0050692 GO:0005515 AI D 816622 DBD domain binding
GO:0050693 GO:0005515 AI D 816622 LBD domain binding
GO:0050694 GO:0003824 AI D 821239 galactose 3-O-sulfotransferase activity
GO:0050695 GO:0003824 AI D 824973 benzoylformate decarboxylase activity
GO:0050697 GO:0003824 AI D 825012 1,1,2-trichloroethylene reductive dehalogenase activity
GO:0050698 GO:0003824 AI D proteoglycan sulfotransferase activity
GO:0050699 GO:0005515 AI D 826751 WW domain binding
GO:0050700 GO:0005515 AI D 824788 CARD domain binding
GO:0050733 GO:0005515 AI D 830930 RS domain binding
GO:0050734 GO:0003824 AI D hydroxycinnamoyltransferase activity
GO:0050735 GO:0003824 AI D N-malonyltransferase activity
GO:0050736 GO:0003824 AI D O-malonyltransferase activity
GO:0050737 GO:0003824 AI D O-hydroxycinnamoyltransferase activity
GO:0050738 GO:0003824 AI D fructosyltransferase activity
New obsoletions in function ontology
GO:0003719, transcription factor binding, cytoplasmic sequestering: sequestering is a process rather than a function.
GO:0003788, actin monomer sequestering activity: sequestering is a process not an activity.
GO:0008845, endonuclease VIII activity: represents a gene product.
GO:0019000, endonuclease G activity: represents a gene product.
Term name changes in function ontology
GO:0001517: N-acetylglucosamine-6-O-sulfotransferase activity --> N-acetylglucosamine 6-O-sulfotransferase activity
GO:0001537: N-acetylgalactosamine-4-O-sulfotransferase activity --> N-acetylgalactosamine 4-O-sulfotransferase activity
GO:0004953: eicosanoid receptor activity --> icosanoid receptor activity
GO:0008951: palmitoleoyl [acyl-carrier protein] (ACP)-dependent acyltransferase activity --> palmitoleoyl [acyl-carrier protein]-dependent acyltransferase activity
GO:0018557: 1,2-dihydroxyfluorene 1,1a-dioxygenase activity --> 1,2-dihydroxyfluorene 1,1-alpha-dioxygenase activity
GO:0018562: 3,4-dihydroxyfluorene 4,4a-dioxygenase activity --> 3,4-dihydroxyfluorene 4,4-alpha-dioxygenase activity
GO:0018705: 1,2-dichloroethane reductive dehalogenase activity --> 1,2-dichloroethene reductive dehalogenase activity
GO:0042959: alkanesulphonate transporter activity --> alkanesulfonate transporter activity
New definitions for function ontology terms (16 new definitions)
GO:0001537, N-acetylgalactosamine 4-O-sulfotransferase activity
GO:0003719, transcription factor binding, cytoplasmic sequestering
GO:0003788, actin monomer sequestering activity
GO:0004115, cAMP-specific phosphodiesterase activity
GO:0004116, cGMP-specific phosphodiesterase activity
GO:0008073, ornithine decarboxylase inhibitor activity
GO:0008388, testosterone 15-alpha-hydroxylase activity
GO:0008390, testosterone 16-alpha-hydroxylase activity
GO:0008638, protein tagging activity
GO:0008845, endonuclease VIII activity
GO:0015395, equilibrative nucleoside transporter activity
GO:0016174, NADPH oxidase activity
GO:0016175, superoxide-generating NADPH oxidase activity
GO:0019000, endonuclease G activity
GO:0042285, xylosyltransferase activity
GO:0050645, limonoid glucosyltransferase activity
New term merges in function ontology
GO:0045440 has been merged into GO:0050640, isopenicillin-N N-acyltransferase activity
Term movements in function ontology:
Terms movements under GO Slim term 'nucleotide binding ; GO:0000166'
- GO:0001730, 2'-5'-oligoadenylate synthetase activity
- GO:0003924, GTPase activity
- GO:0003925, small monomeric GTPase activity
- GO:0003926, ARF small monomeric GTPase activity
- GO:0003927, heterotrimeric G-protein GTPase activity
- GO:0003928, RAB small monomeric GTPase activity
- GO:0003929, RAN small monomeric GTPase activity
- GO:0003930, RAS small monomeric GTPase activity
- GO:0003931, Rho small monomeric GTPase activity
- GO:0003932, SAR small monomeric GTPase activity
- GO:0004003, ATP dependent DNA helicase activity
- GO:0004004, ATP dependent RNA helicase activity
- GO:0004008, copper-exporting ATPase activity
- GO:0004009, ATP-binding cassette (ABC) transporter activity
- GO:0004012, phospholipid-translocating ATPase activity
- GO:0005085, guanyl-nucleotide exchange factor activity
- GO:0005086, ARF guanyl-nucleotide exchange factor activity
- GO:0005087, Ran guanyl-nucleotide exchange factor activity
- GO:0005088, Ras guanyl-nucleotide exchange factor activity
- GO:0005089, Rho guanyl-nucleotide exchange factor activity
- GO:0005090, Sar guanyl-nucleotide exchange factor activity
- GO:0005260, channel-conductance-controlling ATPase activity
- GO:0005388, calcium-transporting ATPase activity
- GO:0005391, sodium/potassium-exchanging ATPase activity
- GO:0005395, eye pigment precursor transporter activity
- GO:0005396, transmembrane conductance regulator activity
- GO:0008026, ATP dependent helicase activity
- GO:0008094, DNA dependent ATPase activity
- GO:0008186, RNA dependent ATPase activity
- GO:0008321, Ral guanyl-nucleotide exchange factor activity
- GO:0008547, protein-synthesizing GTPase activity
- GO:0008548, signal-recognition-particle GTPase activity
- GO:0008549, dynamine GTPase activity
- GO:0008550, tubulin GTPase activity
- GO:0008551, cadmium-exporting ATPase activity
- GO:0008552, zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity
- GO:0008553, hydrogen-exporting ATPase activity, phosphorylative mechanism
- GO:0008554, sodium-exporting ATPase activity, phosphorylative mechanism
- GO:0008555, chloride-transporting ATPase activity
- GO:0008556, potassium-transporting ATPase activity
- GO:0008558, guanine-transporting ATPase activity
- GO:0008559, xenobiotic-transporting ATPase activity
- GO:0008560, steroid-transporting ATPase activity
- GO:0008564, protein-secreting ATPase activity
- GO:0008566, mitochondrial protein-transporting ATPase activity
- GO:0008619, RHEB small monomeric GTPase activity
- GO:0008722, DNA helicase IV activity
- GO:0008900, hydrogen/potassium-exchanging ATPase activity
- GO:0015406, ABC-type uptake permease activity
- GO:0015407, monosaccharide-transporting ATPase activity
- GO:0015408, ferric-transporting ATPase activity
- GO:0015410, manganese-transporting ATPase activity
- GO:0015411, taurine-transporting ATPase activity
- GO:0015412, molybdate-transporting ATPase activity
- GO:0015413, nickel-transporting ATPase activity
- GO:0015414, nitrate-transporting ATPase activity
- GO:0015415, phosphate-transporting ATPase activity
- GO:0015416, phosphonate-transporting ATPase activity
- GO:0015417, polyamine-transporting ATPase activity
- GO:0015418, quaternary-amine-transporting ATPase activity
- GO:0015419, sulfate-transporting ATPase activity
- GO:0015420, vitamin B12-transporting ATPase activity
- GO:0015421, oligopeptide-transporting ATPase activity
- GO:0015422, oligosaccharide-transporting ATPase activity
- GO:0015423, maltose-transporting ATPase activity
- GO:0015424, amino acid-transporting ATPase activity
- GO:0015425, nonpolar-amino acid-transporting ATPase activity
- GO:0015426, polar-amino-acid-transporting ATPase activity
- GO:0015427, ABC-type efflux porter activity
- GO:0015428, type I protein secretor activity
- GO:0015430, glycerol-3-phosphate-transporting ATPase activity
- GO:0015431, conjugate transporter activity
- GO:0015432, bile acid porter activity
- GO:0015433, peptide antigen transporter activity
- GO:0015435, ABC-type efflux permease activity
- GO:0015436, capsular-polysaccharide-transporting ATPase activity
- GO:0015437, lipopolysaccharide-transporting ATPase activity
- GO:0015438, teichoic-acid-transporting ATPase activity
- GO:0015439, heme-transporting ATPase activity
- GO:0015440, peptide-transporting ATPase activity
- GO:0015441, beta-glucan-transporting ATPase activity
- GO:0015444, magnesium-importing ATPase activity
- GO:0015445, silver-exporting ATPase activity
- GO:0015446, arsenite-transporting ATPase activity
- GO:0015462, protein-transporting ATPase activity
- GO:0015594, putrescine porter activity
- GO:0015595, spermidine porter activity
- GO:0015596, glycine betaine/proline porter activity
- GO:0015597, histidine/arginine/lysine/ornithine porter activity
- GO:0015598, arginine porter activity
- GO:0015599, glutamine porter activity
- GO:0015600, glutamate/aspartate porter activity
- GO:0015601, cystine/diaminopimelate porter activity
- GO:0015602, leucine/isoleucine/valine porter activity
- GO:0015608, carbohydrate uptake transporter activity
- GO:0015609, maltooligosaccharide porter activity
- GO:0015610, glycerol-phosphate porter activity
- GO:0015611, D-ribose porter activity
- GO:0015612, L-arabinose porter activity
- GO:0015613, galactose/glucose (methylgalactoside) porter activity
- GO:0015614, D-xylose porter activity
- GO:0015615, D-allose porter activity
- GO:0015616, DNA translocase activity
- GO:0015617, pilin/fimbrilin exporter activity
- GO:0015619, thiamin, thiamin pyrophosphate porter activity
- GO:0015623, iron-chelate-transporting ATPase activity
- GO:0015624, ferric-enterobactin porter activity
- GO:0015625, ferric-hydroxamate porter activity
- GO:0015662, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
- GO:0016146, protein-synthesizing GTPase activity, initiation
- GO:0016147, protein-synthesizing GTPase activity, elongation
- GO:0016148, protein-synthesizing GTPase activity, termination
- GO:0016150, translation release factor activity, codon nonspecific
- GO:0016463, zinc-exporting ATPase activity
- GO:0016464, chloroplast protein-transporting ATPase activity
- GO:0016887, ATPase activity
- GO:0017034, Rap guanyl-nucleotide exchange factor activity
- GO:0017112, Rab guanyl-nucleotide exchange factor activity
- GO:0017116, single-stranded DNA dependent ATP dependent DNA helicase activity
- GO:0017132, cyclic nucleotide dependent guanyl-nucleotide exchange factor activity
- GO:0019829, cation-transporting ATPase activity
- GO:0030676, Rac guanyl-nucleotide exchange factor activity
- GO:0042623, ATPase activity, coupled
- GO:0042624, ATPase activity, uncoupled
- GO:0042625, ATPase activity, coupled to transmembrane movement of ions
- GO:0042626, ATPase activity, coupled to transmembrane movement of substances
- GO:0042961, antimonite-transporting ATPase activity
- GO:0046623, sphingolipid-translocating ATPase activity
- GO:0046961, hydrogen-transporting ATPase activity, rotational mechanism
- GO:0046962, sodium-transporting ATPase activity, rotational mechanism
Terms movements under GO Slim term 'DNA binding ; GO:0003677'
- GO:0000014, single-stranded DNA specific endodeoxyribonuclease activity
- GO:0000150, recombinase activity
- GO:0000332, template for synthesis of G-rich strand of telomere DNA activity
- GO:0000700, mismatch base pair DNA N-glycosylase activity
- GO:0000701, purine-specific mismatch base pair DNA N-glycosylase activity
- GO:0000702, oxidized base lesion DNA N-glycosylase activity
- GO:0000703, pyrimidine-specific oxidized base lesion DNA N-glycosylase activity
- GO:0000704, pyrimidine dimer DNA N-glycosylase activity
- GO:0003678, DNA helicase activity
- GO:0003720, telomerase activity
- GO:0003721, telomeric template RNA reverse transcriptase activity
- GO:0003904, deoxyribodipyrimidine photo-lyase activity
- GO:0003905, alkylbase DNA N-glycosylase activity
- GO:0003906, DNA-(apurinic or apyrimidinic site) lyase activity
- GO:0003908, methylated-DNA-[protein]-cysteine S-methyltransferase activity
- GO:0004003, ATP dependent DNA helicase activity
- GO:0004520, endodeoxyribonuclease activity
- GO:0004529, exodeoxyribonuclease activity
- GO:0004530, deoxyribonuclease I activity
- GO:0004531, deoxyribonuclease II activity
- GO:0004536, deoxyribonuclease activity
- GO:0004537, caspase-activated deoxyribonuclease activity
- GO:0004844, uracil DNA N-glycosylase activity
- GO:0008263, pyrimidine-specific mismatch base pair DNA N-glycosylase activity
- GO:0008296, 3'-5' exodeoxyribonuclease activity
- GO:0008297, single-stranded DNA specific exodeoxyribonuclease activity
- GO:0008309, double-stranded DNA specific exodeoxyribonuclease activity
- GO:0008310, single-stranded DNA specific 3'-5' exodeoxyribonuclease activity
- GO:0008311, double-stranded DNA specific 3'-5' exodeoxyribonuclease activity
- GO:0008534, purine-specific oxidized base lesion DNA N-glycosylase activity
- GO:0008725, DNA-3-methyladenine glycosylase I activity
- GO:0008821, crossover junction endoribonuclease activity
- GO:0008833, deoxyribonuclease IV (phage-T4-induced) activity
- GO:0008844, endodeoxyribonuclease RUS activity
- GO:0008852, exodeoxyribonuclease I activity
- GO:0008853, exodeoxyribonuclease III activity
- GO:0008854, exodeoxyribonuclease V activity
- GO:0008855, exodeoxyribonuclease VII activity
- GO:0008856, exodeoxyribonuclease X activity
- GO:0008858, exonuclease VIII activity
- GO:0008946, oligonucleotidase activity
- GO:0008997, ribonuclease R activity
- GO:0009009, site-specific recombinase activity
- GO:0009035, type I site-specific deoxyribonuclease activity
- GO:0009036, type II site-specific deoxyribonuclease activity
- GO:0009037, tyrosine-based site-specific recombinase activity
- GO:0009378, Holliday junction helicase activity
- GO:0009381, excinuclease ABC activity
- GO:0015666, restriction endodeoxyribonuclease activity
- GO:0015668, type III site-specific deoxyribonuclease activity
- GO:0016888, endodeoxyribonuclease activity, producing 5'-phosphomonoesters
- GO:0016889, endodeoxyribonuclease activity, producing other than 5'-phosphomonoesters
- GO:0016890, site-specific endodeoxyribonuclease activity, specific for altered base
- GO:0016895, exodeoxyribonuclease activity, producing 5'-phosphomonoesters
- GO:0017065, single-strand selective uracil DNA N-glycosylase activity
- GO:0017108, 5' flap endonuclease activity
- GO:0019000, endonuclease G activity
- GO:0019104, DNA N-glycosylase activity
- GO:0045145, single-stranded DNA specific 5'-3' exodeoxyribonuclease activity
- GO:0046403, polynucleotide 3'-phosphatase activity
- GO:0046404, polynucleotide 5'-hydroxyl-kinase activity
- GO:0048256, flap endonuclease activity
- GO:0048257, 3' flap endonuclease activity
Terms movements under GO Slim term 'RNA binding ; GO:0003723'
- GO:0000171, ribonuclease MRP activity
- GO:0000175, 3'-5' exoribonuclease activity
- GO:0000213, tRNA-intron endonuclease activity
- GO:0003724, RNA helicase activity
- GO:0003726, double-stranded RNA adenosine deaminase activity
- GO:0004004, ATP dependent RNA helicase activity
- GO:0004521, endoribonuclease activity
- GO:0004522, pancreatic ribonuclease activity
- GO:0004523, ribonuclease H activity
- GO:0004524, ribonuclease H1 activity
- GO:0004525, ribonuclease III activity
- GO:0004526, ribonuclease P activity
- GO:0004532, exoribonuclease activity
- GO:0004533, exoribonuclease H activity
- GO:0004534, 5'-3' exoribonuclease activity
- GO:0004535, poly(A)-specific ribonuclease activity
- GO:0004540, ribonuclease activity
- GO:0004549, tRNA-specific ribonuclease activity
- GO:0008419, RNA lariat debranching enzyme activity
- GO:0008847, Enterobacter ribonuclease activity
- GO:0008859, exoribonuclease II activity
- GO:0008946, oligonucleotidase activity
- GO:0008995, ribonuclease E activity
- GO:0008996, ribonuclease G activity
- GO:0008997, ribonuclease R activity
- GO:0016443, bidentate ribonuclease III activity
- GO:0016891, endoribonuclease activity, producing 5'-phosphomonoesters
- GO:0016892, endoribonuclease activity, producing other than 5'-phosphomonoesters
- GO:0016896, exoribonuclease activity, producing 5'-phosphomonoesters
- GO:0016897, exoribonuclease activity, producing 3'-phosphomonoesters
- GO:0019000, endonuclease G activity
- GO:0042781, 3' tRNA processing endoribonuclease activity
- GO:0046589, ribonuclease T1 activity
Terms movements under GO Slim term 'actin binding ; GO:0003779'
- GO:0003788, actin monomer sequestering activity
Terms movements under GO Slim term 'catalytic activity ; GO:0003824'
+ GO:0000150, recombinase activity
+ GO:0009009, site-specific recombinase activity
Terms movements under GO Slim term 'nuclease activity ; GO:0004518'
- GO:0008845, endonuclease VIII activity
- GO:0019000, endonuclease G activity
Terms movements under GO Slim term 'binding ; GO:0005488'
+ GO:0005041, low-density lipoprotein receptor activity
+ GO:0008034, lipoprotein binding
+ GO:0008035, high-density lipoprotein binding
+ GO:0030169, low-density lipoprotein binding
+ GO:0030492, hemoglobin binding
+ GO:0030519, snoRNP binding
+ GO:0042497, triacylated lipoprotein binding
+ GO:0042498, diacylated lipoprotein binding
Terms movements under GO Slim term 'protein binding ; GO:0005515'
- GO:0003719, transcription factor binding, cytoplasmic sequestering
- GO:0005041, low-density lipoprotein receptor activity
- GO:0008034, lipoprotein binding
- GO:0008035, high-density lipoprotein binding
- GO:0030169, low-density lipoprotein binding
- GO:0030492, hemoglobin binding
- GO:0030519, snoRNP binding
- GO:0042497, triacylated lipoprotein binding
- GO:0042498, diacylated lipoprotein binding
Terms movements under GO Slim term 'cytoskeletal protein binding ; GO:0008092'
- GO:0003777, microtubule motor activity
- GO:0008569, minus-end-directed kinesin ATPase activity
- GO:0008574, plus-end-directed kinesin ATPase activity
- GO:0016326, kinesin motor activity
Terms movements under GO Slim term 'apoptosis regulator activity ; GO:0016329'
+ GO:0008656, caspase activator activity
New terms in process ontology (152 new terms)
GO:0001765 GO:0006996 MGI D lipid raft formation
GO:0016043
GO:0001766 GO:0006996 MGI D lipid raft polarization
GO:0016043
GO:0010171 GO:0007275 TAIR D 823132 body morphogenesis
GO:0010172 GO:0007275 TAIR D 823132 embryonic body morphogenesis
GO:0035026 GO:0007275 FB D leading edge cell differentiation
GO:0030154
GO:0035027 GO:0007275 FB D leading edge cell fate commitment
GO:0030154
GO:0035028 GO:0007275 FB D leading edge cell fate determination
GO:0030154
GO:0035029 GO:0007275 FB D dorsal closure, leading edge cell fate commitment
GO:0030154
GO:0035036 GO:0000003 FB D 797384 sperm-egg recognition
GO:0035037 GO:0000003 FB D 797384 sperm entry
GO:0035038 GO:0000003 FB D 797384 female pronucleus formation
GO:0016043
GO:0035039 GO:0000003 FB D 797384 male pronucleus formation
GO:0035040 GO:0000003 FB D 797384 sperm nuclear envelope removal
GO:0035041 GO:0000003 FB D 797384 sperm chromatin decondensation
GO:0006259
GO:0016043
GO:0035042 GO:0000003 FB D 797384 exchange of chromosomal proteins
GO:0006259
GO:0016043
GO:0035043 GO:0000003 FB D 797384 male pronuclear envelope synthesis
GO:0016043
GO:0035044 GO:0000003 FB D 797384 sperm aster formation
GO:0007010
GO:0035045 GO:0000003 FB D 797384 sperm plasma membrane breakdown
GO:0035046 GO:0000003 FB D 823137 pronuclear migration
GO:0035047 GO:0000003 FB D 823138 centrosomal and pronuclear rotation
GO:0035048 GO:0006810 FB D 821367 splicing factor protein-nucleus import
GO:0015031
GO:0019538
GO:0035050 GO:0007275 FB D 807831 embryonic heart tube development
GO:0035051 GO:0007275 FB D 807831 cardiac cell differentiation
GO:0030154
GO:0035052 GO:0007275 FB D 807831 aortic cell fate commitment (sensu Drosophila)
GO:0030154
GO:0035053 GO:0007275 FB D 807831 heart proper cell fate commitment (sensu Drosophila)
GO:0030154
GO:0035054 GO:0007275 FB D 807831 embryonic heart tube anterior/posterior pattern formation
GO:0035055 GO:0008152 FB D regulation of nuclear mRNA splicing via U2-type spliceosome
GO:0035056 GO:0008152 FB D negative regulation of nuclear mRNA splicing via U2-type spliceosome
GO:0035057 GO:0008152 FB D positive regulation of nuclear mRNA splicing via U2-type spliceosome
GO:0035058 GO:0016043 FB D 828187 sensory cilium biogenesis
GO:0042963 GO:0016032 JL D phage assembly
GO:0042964 GO:0006412 JL D thioredoxin biosynthesis
GO:0042965 GO:0006412 JL D glutaredoxin biosynthesis
GO:0042966 GO:0006412 JL D biotin carboxyl carrier protein biosynthesis
GO:0042967 GO:0006412 JL D acyl-carrier protein biosynthesis
GO:0042968 GO:0006810 JL D homoserine transport
GO:0042969 GO:0006810 JL D lactone transport
GO:0042976 GO:0007165 JL D 810575 tyrosine phosphorylation of JAK protein
GO:0042977 GO:0007165 JL D 810575 tyrosine phosphorylation of JAK2 protein
GO:0042981 GO:0008219 JL D 800967 regulation of apoptosis
GO:0042982 GO:0019538 JL D 795430 amyloid precursor protein metabolism
GO:0042983 GO:0006412 JL D 795430 amyloid precursor protein biosynthesis
GO:0019538
GO:0042984 GO:0006412 JL D 795430 regulation of amyloid precursor protein biosynthesis
GO:0019538
GO:0042985 GO:0006412 JL D 795430 negative regulation of amyloid precursor protein biosynthesis
GO:0019538
GO:0042986 GO:0006412 JL D 795430 positive regulation of amyloid precursor protein biosynthesis
GO:0019538
GO:0042987 GO:0009056 JL D 795430 amyloid precursor protein catabolism
GO:0019538
GO:0042989 GO:0007010 JL D 582241 sequestering of actin monomers
GO:0042990 GO:0006810 JL D 582241 regulation of transcription factor-nucleus import
GO:0015031
GO:0019538
GO:0042991 GO:0006810 JL D 582241 transcription factor-nucleus import
GO:0015031
GO:0019538
GO:0042992 GO:0006810 JL D 582241 negative regulation of transcription factor-nucleus import
GO:0015031
GO:0019538
GO:0042993 GO:0006810 JL D 582241 positive regulation of transcription factor-nucleus import
GO:0015031
GO:0019538
GO:0042994 GO:0006810 JL D 582241 cytoplasmic sequestering of transcription factor
GO:0015031
GO:0019538
GO:0042996 GO:0006810 JL D 582241 regulation of Golgi to plasma membrane protein transport
GO:0042997 GO:0006810 JL D 582241 negative regulation of Golgi to plasma membrane protein transport
GO:0042998 GO:0006810 JL D 582241 positive regulation of Golgi to plasma membrane protein transport
GO:0042999 GO:0006810 JL D 582241 regulation of Golgi to plasma membrane CFTR protein transport
GO:0043000 GO:0006810 JL D 582241 Golgi to plasma membrane CFTR protein transport
GO:0043001 GO:0006810 JL D 582241 Golgi to plasma membrane protein transport
GO:0043002 GO:0006810 JL D 582241 negative regulation of Golgi to plasma membrane CFTR protein transport
GO:0043003 GO:0006810 JL D 582241 positive regulation of Golgi to plasma membrane CFTR protein transport
GO:0043004 GO:0006810 JL D 797250 cytoplasmic sequestering of CFTR protein
GO:0043006 GO:0007165 JL D 802332 calcium-dependent phospholipase A2 activation
GO:0043007 GO:0016043 JL D 819332 rDNA maintenance
GO:0043009 GO:0007275 JL D 825690 embryonic development (sensu Vertebrata)
GO:0043010 GO:0007275 JL D 825690 eye morphogenesis (sensu Vertebrata)
GO:0043011 GO:0007275 JL D 825731 dendritic cell differentiation
GO:0030154
GO:0043012 GO:0000003 JL D 819863 regulation of fusion of sperm to egg plasma membrane
GO:0008150
GO:0043013 GO:0000003 JL D 819863 negative regulation of fusion of sperm to egg plasma membrane
GO:0008150
GO:0043016 GO:0006412 JL D 829679 regulation of tumor necrosis factor-beta biosynthesis
GO:0008152
GO:0009058
GO:0009607
GO:0019538
GO:0043017 GO:0006412 JL D 829679 positive regulation of tumor necrosis factor-beta biosynthesis
GO:0008152
GO:0009058
GO:0009607
GO:0019538
GO:0043018 GO:0006412 JL D 829679 negative regulation of tumor necrosis factor-beta biosynthesis
GO:0008152
GO:0009058
GO:0009607
GO:0019538
GO:0043019 GO:0006950 JL D 823742 response to pathogenic insects
GO:0009607
GO:0048262 GO:0007275 JIC D 824783 determination of dorsoventral asymmetry
GO:0048263 GO:0007275 JIC D 824783 determination of dorsal identity
GO:0048264 GO:0007275 JIC D 824783 determination of ventral identity
GO:0048265 GO:0006950 JIC D 771072 response to pain
GO:0048266 GO:0006950 JIC D 771072 behavioral response to pain
GO:0007610
GO:0048267 GO:0006950 JIC D 771072 physiological response to pain
GO:0048268 GO:0016043 JIC D 771072 clathrin cage assembly
GO:0050650 GO:0005975 AI D 818510 chondroitin sulfate proteoglycan biosynthesis
GO:0008152
GO:0009058
GO:0019538
GO:0050651 GO:0005975 AI D 818510 dermatan sulfate proteoglycan biosynthesis
GO:0008152
GO:0009058
GO:0019538
GO:0050652 GO:0005975 AI D 818510 dermatan sulfate proteoglycan biosynthesis, polysaccharide chain biosynthesis
GO:0008152
GO:0009058
GO:0019538
GO:0050653 GO:0005975 AI D 818510 chondroitin sulfate proteoglycan biosynthesis, polysaccharide chain biosynthesis
GO:0008152
GO:0009058
GO:0019538
GO:0050654 GO:0005975 AI D 818510 chondroitin sulfate proteoglycan metabolism
GO:0008152
GO:0019538
GO:0050655 GO:0005975 AI D 818510 dermatan sulfate proteoglycan metabolism
GO:0008152
GO:0019538
GO:0050657 GO:0006810 AI D 819280 nucleic acid transport
GO:0050658 GO:0006810 AI D 819280 RNA transport
GO:0050663 GO:0007582 AI D 819849 cytokine secretion
GO:0050665 GO:0008152 AI D 815749 hydrogen peroxide biosynthesis
GO:0050666 GO:0006519 AI D 820545 regulation of homocysteine metabolism
GO:0008152
GO:0050667 GO:0006519 AI D 820545 homocysteine metabolism
GO:0008152
GO:0050668 GO:0006519 AI D 820545 positive regulation of homocysteine metabolism
GO:0008152
GO:0050669 GO:0006519 AI D 820545 negative regulation of homocysteine metabolism
GO:0008152
GO:0050670 GO:0008283 AI D 809236 regulation of lymphocyte proliferation
GO:0009607
GO:0050671 GO:0008283 AI D 809236 positive regulation of lymphocyte proliferation
GO:0009607
GO:0050672 GO:0008283 AI D 809236 negative regulation of lymphocyte proliferation
GO:0009607
GO:0050673 GO:0008283 AI D 811113 epithelial cell proliferation
GO:0050674 GO:0008283 AI D 811113 urothelial cell proliferation
GO:0050675 GO:0008283 AI D 811113 regulation of urothelial cell proliferation
GO:0050676 GO:0008283 AI D 811113 negative regulation of urothelial cell proliferation
GO:0050677 GO:0008283 AI D 811113 positive regulation of urothelial cell proliferation
GO:0009607
GO:0050678 GO:0008283 AI D 811113 regulation of epithelial cell proliferation
GO:0050679 GO:0008283 AI D 811113 positive regulation of epithelial cell proliferation
GO:0009607
GO:0050680 GO:0008283 AI D 811113 negative regulation of epithelial cell proliferation
GO:0050684 GO:0008152 AI D 816551 regulation of mRNA processing
GO:0050685 GO:0008152 AI D 816551 positive regulation of mRNA processing
GO:0050686 GO:0008152 AI D 816551 negative regulation of mRNA processing
GO:0050687 GO:0006950 AI D 795886 negative regulation of antiviral response
GO:0009607
GO:0050688 GO:0006950 AI D 795886 regulation of antiviral response
GO:0009607
GO:0050689 GO:0006950 AI D 795886 negative regulation by host of antiviral response
GO:0009607
GO:0050690 GO:0006950 AI D 795886 viral regulation of antiviral response
GO:0009607
GO:0050691 GO:0006950 AI D 795886 host regulation of antiviral response
GO:0009607
GO:0050696 GO:0008152 AI D 825031 trichloroethylene catabolism
GO:0009056
GO:0009628
GO:0050701 GO:0007582 AI D 824755 interleukin-1 secretion
GO:0050702 GO:0007582 AI D 824755 interleukin-1 beta secretion
GO:0050703 GO:0007582 AI D 824755 interleukin-1 alpha secretion
GO:0050704 GO:0007582 AI D 824755 regulation of interleukin-1 secretion
GO:0050705 GO:0007582 AI D 824755 regulation of interleukin-1 alpha secretion
GO:0050706 GO:0007582 AI D 824755 regulation of interleukin-1 beta secretion
GO:0050707 GO:0007582 AI D 824755 regulation of cytokine secretion
GO:0050708 GO:0007582 AI D 824755 regulation of protein secretion
GO:0050709 GO:0007582 AI D 824755 negative regulation of protein secretion
GO:0050710 GO:0007582 AI D 824755 negative regulation of cytokine secretion
GO:0050711 GO:0007582 AI D 824755 negative regulation of interleukin-1 secretion
GO:0050712 GO:0007582 AI D 824755 negative regulation of interleukin-1 alpha secretion
GO:0050713 GO:0007582 AI D 824755 negative regulation of interleukin-1 beta secretion
GO:0050714 GO:0007582 AI D 824755 positive regulation of protein secretion
GO:0050715 GO:0007582 AI D 824755 positive regulation of cytokine secretion
GO:0050716 GO:0007582 AI D 824755 positive regulation of interleukin-1 secretion
GO:0050717 GO:0007582 AI D 824755 positive regulation of interleukin-1 alpha secretion
GO:0050718 GO:0007582 AI D 824755 positive regulation of interleukin-1 beta secretion
GO:0050719 GO:0006412 AI D 824755 interleukin-1 alpha biosynthesis
GO:0009607
GO:0019538
GO:0050720 GO:0006412 AI D 824755 interleukin-1 beta biosynthesis
GO:0009607
GO:0019538
GO:0050721 GO:0006412 AI D 824755 regulation of interleukin-1 alpha biosynthesis
GO:0008152
GO:0009058
GO:0009607
GO:0019538
GO:0050722 GO:0006412 AI D 824755 regulation of interleukin-1 beta biosynthesis
GO:0008152
GO:0009058
GO:0009607
GO:0019538
GO:0050723 GO:0006412 AI D 824755 negative regulation of interleukin-1 alpha biosynthesis
GO:0008152
GO:0009058
GO:0009607
GO:0019538
GO:0050724 GO:0006412 AI D 824755 negative regulation of interleukin-1 beta biosynthesis
GO:0008152
GO:0009058
GO:0009607
GO:0019538
GO:0050725 GO:0006412 AI D 824755 positive regulation of interleukin-1 beta biosynthesis
GO:0008152
GO:0009058
GO:0009607
GO:0019538
GO:0050726 GO:0006412 AI D 824755 positive regulation of interleukin-1 alpha biosynthesis
GO:0008152
GO:0009058
GO:0009607
GO:0019538
GO:0050727 GO:0006950 AI D 824755 regulation of inflammatory response
GO:0009605
GO:0009607
GO:0050728 GO:0006950 AI D 824755 negative regulation of inflammatory response
GO:0009605
GO:0009607
GO:0050729 GO:0006950 AI D 824755 positive regulation of inflammatory response
GO:0009605
GO:0009607
GO:0050730 GO:0006464 AI D 829689 regulation of peptidyl-tyrosine phosphorylation
GO:0008152
GO:0050731 GO:0006464 AI D 829689 positive regulation of peptidyl-tyrosine phosphorylation
GO:0008152
GO:0050732 GO:0006464 AI D 829689 negative regulation of peptidyl-tyrosine phosphorylation
GO:0008152
GO:0050739 GO:0006464 AI D peptide cross-linking via S-[5'-(L-tryptoph-6'-yl)-L-tyrosin-3'-yl]-L-methionin-S-ium
GO:0050740 GO:0006464 AI D protein-FMN linkage via O3-riboflavin phosphoryl-L-threonine
GO:0050741 GO:0006464 AI D protein-FMN linkage via O3-riboflavin phosphoryl-L-serine
GO:0050742 GO:0006464 AI D protein-FMN linkage via S-(4a-FMN)-L-cysteine
GO:0050743 GO:0006464 AI D protein-FMN linkage via 1'-(8alpha-FMN)-L-histidine
GO:0050744 GO:0006464 AI D protein-FMN linkage via 3'-(8alpha-FMN)-L-histidine
GO:0050745 GO:0006464 AI D peptide cross-linking via L-cysteinyl-5-imidazolinone glycine
New obsoletions in process ontology
GO:0001526, proteoglycan sulfate transfer: represents a group of molecular functions.
GO:0006803, glutathione conjugation reaction: represents a molecular function and not a biological process.
Obsolete terms reinstated in process ontology
GO:0045458, recombination within rDNA repeats:
Term name changes in process ontology
GO:0000054: ribosome nucleus export --> ribosome-nucleus export
GO:0000055: ribosomal large subunit nucleus export --> ribosomal large subunit-nucleus export
GO:0000056: ribosomal small subunit nucleus export --> ribosomal small subunit-nucleus export
GO:0006690: eicosanoid metabolism --> icosanoid metabolism
GO:0006924: peripheral killing of activated T-cells --> programmed cell death, activated T-cells
GO:0006925: killing of inflammatory cells --> programmed cell death, inflammatory cells
GO:0006926: killing virus-infected cells --> programmed cell death, virus-infected cells
GO:0006927: killing transformed cells --> programmed cell death, transformed cells
GO:0007342: binding/fusion of sperm to egg plasma membrane --> fusion of sperm to egg plasma membrane
GO:0007393: leading edge cell fate determination --> dorsal closure, leading edge cell fate determination
GO:0007394: elongation of leading edge cells --> dorsal closure, elongation of leading edge cells
GO:0007395: spreading of leading edge cells --> dorsal closure, spreading of leading edge cells
GO:0007513: pericardial cell development --> pericardial cell differentiation
GO:0009615: response to viruses --> response to virus
GO:0018069: protein-protein cross-linking via 4'-(L-tryptophan)-L-tryptophyl quinone --> peptide cross-linking via 4'-(L-tryptophan)-L-tryptophyl quinone
GO:0018096: protein-protein cross-linking via S-(2-aminovinyl)-D-cysteine --> peptide cross-linking via S-(2-aminovinyl)-D-cysteine
GO:0018124: protein-protein cross-linking via 5'-(N6-L-lysine)-L-topaquinone --> peptide cross-linking via 5'-(N6-L-lysine)-L-topaquinone
GO:0018132: protein-protein cross-linking via L-cysteine oxazolecarboxylic acid --> peptide cross-linking via L-cysteine oxazolecarboxylic acid
GO:0018133: protein-protein cross-linking via L-cysteine oxazolinecarboxylic acid --> peptide cross-linking via L-cysteine oxazolinecarboxylic acid
GO:0018134: protein-protein cross-linking via glycine oxazolecarboxylic acid --> peptide cross-linking via glycine oxazolecarboxylic acid
GO:0018137: protein-protein cross-linking via glycine thiazolecarboxylic acid --> peptide cross-linking via glycine thiazolecarboxylic acid
GO:0018138: protein-protein cross-linking via L-serine thiazolecarboxylic acid --> peptide cross-linking via L-serine thiazolecarboxylic acid
GO:0018139: protein-protein cross-linking via L-phenylalanine thiazolecarboxylic acid --> peptide cross-linking via L-phenylalanine thiazolecarboxylic acid
GO:0018140: protein-protein cross-linking via L-cysteine thiazolecarboxylic acid --> peptide cross-linking via L-cysteine thiazolecarboxylic acid
GO:0018141: protein-protein cross-linking via L-lysine thiazolecarboxylic acid --> peptide cross-linking via L-lysine thiazolecarboxylic acid
GO:0018149: protein-protein cross-linking --> peptide cross-linking
GO:0018150: protein-protein cross-linking via 3-(3'-L-histidyl)-L-tyrosine --> peptide cross-linking via 3-(3'-L-histidyl)-L-tyrosine
GO:0018151: protein-protein cross-linking via L-histidyl-L-tyrosine --> peptide cross-linking via L-histidyl-L-tyrosine
GO:0018152: protein-protein cross-linking via 3'-(1'-L-histidyl)-L-tyrosine --> peptide cross-linking via 3'-(1'-L-histidyl)-L-tyrosine
GO:0018154: protein-protein cross-linking via (2R,6R)-lanthionine --> peptide cross-linking via (2R,6R)-lanthionine
GO:0018155: protein-protein cross-linking via sn-(2S,6R)-lanthionine --> peptide cross-linking via sn-(2S,6R)-lanthionine
GO:0018156: protein-protein cross-linking via (2S,3S,6R)-3-methyl-lanthionine --> peptide cross-linking via (2S,3S,6R)-3-methyl-lanthionine
GO:0018157: protein-protein cross-linking via an oxazole or thiazole --> peptide cross-linking via an oxazole or thiazole
GO:0018162: protein-protein cross-linking via S-(2-aminovinyl)-3-methyl-D-cysteine --> peptide cross-linking via S-(2-aminovinyl)-3-methyl-D-cysteine
GO:0018232: protein-protein cross-linking via S-(L-isoglutamyl)-L-cysteine --> peptide cross-linking via S-(L-isoglutamyl)-L-cysteine
GO:0018233: protein-protein cross-linking via 2'-(S-L-cysteinyl)-L-histidine --> peptide cross-linking via 2'-(S-L-cysteinyl)-L-histidine
GO:0018234: protein-protein cross-linking via 3'-(S-L-cysteinyl)-L-tyrosine --> peptide cross-linking via 3'-(S-L-cysteinyl)-L-tyrosine
GO:0018252: biosynthesis of protein-protein cross-link via L-seryl-5-imidazolinone glycine --> peptide cross-linking via L-seryl-5-imidazolinone glycine
GO:0018253: biosynthesis of protein-protein cross-link via 5-imidazolinone glycine --> peptide cross-linking via 5-imidazolinone glycine
GO:0018255: protein-protein cross-linking via S-glycyl-L-cysteine --> peptide cross-linking via S-glycyl-L-cysteine
GO:0018274: protein-protein cross-linking via L-lysinoalanine --> peptide cross-linking via L-lysinoalanine
GO:0018313: protein-protein cross-linking via L-alanyl-5-imidazolinone glycine --> peptide cross-linking via L-alanyl-5-imidazolinone glycine
GO:0018316: protein-protein cross-linking via L-cystine --> peptide cross-linking via L-cystine
GO:0018420: protein-protein cross-linking via N6-(L-isoaspartyl)-L-lysine --> peptide cross-linking via N6-(L-isoaspartyl)-L-lysine
GO:0018967: tetrachloroethene metabolism --> tetrachloroethylene metabolism
GO:0019184: nonreciprocal peptide biosynthesis --> nonribosomal peptide biosynthesis
GO:0019337: tetrachloroethene catabolism --> tetrachloroethylene catabolism
GO:0019729: biosynthesis of protein-protein cross-link via 2-imino-glutaminyl-5-imidazolinone glycine --> peptide cross-linking via 2-imino-glutaminyl-5-imidazolinone glycine
GO:0019800: protein-protein cross-linking via chondroitin 4-sulfate glycosaminoglycan --> peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan
GO:0019927: protein-protein cross-linking via 4'-(S-L-cysteinyl)-L-tryptophyl quinone --> peptide cross-linking via 4'-(S-L-cysteinyl)-L-tryptophyl quinone
GO:0019928: protein-protein cross-linking via 3-(S-L-cysteinyl)-L-aspartic acid --> peptide cross-linking via 3-(S-L-cysteinyl)-L-aspartic acid
GO:0019929: protein-protein cross-linking via 4-(S-L-cysteinyl)-L-glutamic acid --> peptide cross-linking via 4-(S-L-cysteinyl)-L-glutamic acid
GO:0019938: protein-protein cross-linking via N6-(L-isoaspartyl)-L-lysine, presumed catalytic --> peptide cross-linking via N6-(L-isoaspartyl)-L-lysine, presumed catalytic
GO:0030098: lymphocytic blood cell differentiation --> lymphocyte differentiation
GO:0030466: chromatin silencing at silent mating type cassettes (sensu Fungi) --> chromatin silencing at silent mating-type cassettes (sensu Fungi)
GO:0040032: body morphogenesis (sensu Nematoda) --> post-embryonic body morphogenesis
GO:0042345: regulation of NF-kappaB protein-nucleus import --> regulation of NF-kappaB-nucleus import
GO:0042346: positive regulation of NF-kappaB protein-nucleus import --> positive regulation of NF-kappaB-nucleus import
GO:0042347: negative regulation of NF-kappaB protein-nucleus import --> negative regulation of NF-kappaB-nucleus import
GO:0042792: rRNA transcription from mitochondrial promotor --> rRNA transcription from mitochondrial promoter
GO:0042794: rRNA transcription from plastid promotor --> rRNA transcription from plastid promoter
GO:0042918: alkanesulphonate transport --> alkanesulfonate transport
GO:0046456: eicosanoid biosynthesis --> icosanoid biosynthesis
GO:0046663: leading edge cell differentiation --> dorsal closure, leading edge cell differentiation
GO:0046804: protein-protein cross-linking via (2S,3S,4Xi,6R)-3-methyl-lanthionine sulfoxide --> peptide cross-linking via (2S,3S,4Xi,6R)-3-methyl-lanthionine sulfoxide
GO:0046924: protein-protein cross-linking via 2-(S-L-cysteinyl)-L-phenylalanine --> peptide cross-linking via 2-(S-L-cysteinyl)-L-phenylalanine
GO:0046925: protein-protein cross-linking via 2-(S-L-cysteinyl)-D-phenylalanine --> peptide cross-linking via 2-(S-L-cysteinyl)-D-phenylalanine
GO:0046926: protein-protein cross-linking via 2-(S-L-cysteinyl)-D-allo-threonine --> peptide cross-linking via 2-(S-L-cysteinyl)-D-allo-threonine
GO:0048108: protein-protein cross-linking via 4-amino-3-isothiazolidinone --> peptide cross-linking via 4-amino-3-isothiazolidinone
GO:0048109: protein-protein cross-linking via 2-amino-3-isothiazolidinone-L-serine --> peptide cross-linking via 2-amino-3-isothiazolidinone-L-serine
New definitions for process ontology terms (29 new definitions)
GO:0006352, transcription initiation
GO:0006461, protein complex assembly
GO:0006494, terminal glycosylation
GO:0006496, terminal N-glycosylation
GO:0006803, glutathione conjugation reaction
GO:0007001, chromosome organization and biogenesis (sensu Eukarya)
GO:0007340, acrosome reaction
GO:0007341, penetration of zona pellucida
GO:0007342, fusion of sperm to egg plasma membrane
GO:0007343, egg activation
GO:0007368, determination of left/right asymmetry
GO:0007508, larval heart development
GO:0007512, adult heart development
GO:0007513, pericardial cell differentiation
GO:0008588, release of cytoplasmic sequestered NF-kappaB
GO:0015919, peroxisomal membrane transport
GO:0016358, dendrite morphogenesis
GO:0018151, peptide cross-linking via L-histidyl-L-tyrosine
GO:0018157, peptide cross-linking via an oxazole or thiazole
GO:0018280, S-linked glycosylation
GO:0018313, peptide cross-linking via L-alanyl-5-imidazolinone glycine
GO:0018317, C-linked glycosylation via tryptophan
GO:0030539, male genital morphogenesis
GO:0040035, hermaphrodite genital morphogenesis
GO:0040038, polar body extrusion after meiotic divisions
GO:0042003, masculinization of hermaphrodite soma (sensu Nematoda)
GO:0042004, feminization of hermaphrodite soma (sensu Nematoda)
GO:0046944, protein amino acid carbamoylation
GO:0048114, polar granule organization and biogenesis (sensu Insecta)
New term merges in process ontology
GO:0007511 has been merged into GO:0007507, heart development
GO:0046650 has been merged into GO:0030098, lymphocyte differentiation
Term movements in process ontology:
Terms movements under GO Slim term 'carbohydrate metabolism ; GO:0005975'
- GO:0001526, proteoglycan sulfate transfer
Terms movements under GO Slim term 'transport ; GO:0006810'
+ GO:0008588, release of cytoplasmic sequestered NF-kappaB
Terms movements under GO Slim term 'response to stress ; GO:0006950'
- GO:0009625, response to insects
+ GO:0019052, viral inhibition of intracellular antiviral response
+ GO:0019053, viral inhibition of extracellular antiviral response
+ GO:0046774, viral inhibition of intracellular interferon activity
+ GO:0046775, viral inhibition of host cytokine production
+ GO:0046776, viral inhibition of MHC class I cell surface presentation
+ GO:0046791, viral inhibition of host complement neutralization
Terms movements under GO Slim term 'development ; GO:0007275'
+ GO:0007510, cardioblast cell fate determination
+ GO:0009997, negative regulation of cardioblast cell fate
+ GO:0010002, cardioblast differentiation
+ GO:0042684, cardioblast cell fate commitment
+ GO:0042685, cardioblast cell fate specification
+ GO:0042686, regulation of cardioblast cell fate
+ GO:0046652, thymocyte differentiation
Terms movements under GO Slim term 'physiological processes ; GO:0007582'
- GO:0010148, transpiration
Terms movements under GO Slim term 'metabolism ; GO:0008152'
- GO:0001308, loss of chromatin silencing during replicative cell aging
- GO:0001526, proteoglycan sulfate transfer
- GO:0006345, loss of chromatin silencing
- GO:0006803, glutathione conjugation reaction
Terms movements under GO Slim term 'cell proliferation ; GO:0008283'
+ GO:0046651, lymphocyte proliferation
Terms movements under GO Slim term 'response to biotic stimulus ; GO:0009607'
+ GO:0030098, lymphocyte differentiation
+ GO:0045058, T-cell selection
+ GO:0045059, positive thymic T-cell selection
+ GO:0045060, negative thymic T-cell selection
+ GO:0045061, thymic T-cell selection
+ GO:0045062, extrathymic T-cell selection
+ GO:0045067, positive extrathymic T-cell selection
+ GO:0045068, negative extrathymic T-cell selection
+ GO:0045619, regulation of lymphocytic blood cell differentiation
+ GO:0045620, negative regulation of lymphocytic blood cell differentiation
+ GO:0045621, positive regulation of lymphocytic blood cell differentiation
Terms movements under GO Slim term 'protein transport ; GO:0015031'
+ GO:0008588, release of cytoplasmic sequestered NF-kappaB
Terms movements under GO Slim term 'cell organization and biogenesis ; GO:0016043'
+ GO:0048202, clathrin coating of Golgi vesicle
Terms movements under GO Slim term 'protein metabolism ; GO:0019538'
+ GO:0006029, proteoglycan metabolism
+ GO:0008588, release of cytoplasmic sequestered NF-kappaB
+ GO:0015012, heparan sulfate proteoglycan biosynthesis
+ GO:0015013, heparan sulfate proteoglycan biosynthesis, linkage to polypeptide
+ GO:0015014, heparan sulfate proteoglycan biosynthesis, polysaccharide chain biosynthesis
+ GO:0015015, heparan sulfate proteoglycan biosynthesis, enzymatic modification
+ GO:0018402, protein-chondroitin sulfate linkage via chondroitin sulfate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine
+ GO:0019800, peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan
+ GO:0030166, proteoglycan biosynthesis
+ GO:0030167, proteoglycan catabolism
+ GO:0030200, heparan sulfate proteoglycan catabolism
+ GO:0030201, heparan sulfate proteoglycan metabolism
+ GO:0030204, chondroitin sulfate metabolism
+ GO:0030205, dermatan sulfate metabolism
+ GO:0030206, chondroitin sulfate biosynthesis
+ GO:0030207, chondroitin sulfate catabolism
+ GO:0030208, dermatan sulfate biosynthesis
+ GO:0030209, dermatan sulfate catabolism
Terms movements under GO Slim term 'cell differentiation ; GO:0030154'
+ GO:0007513, pericardial cell differentiation
+ GO:0046652, thymocyte differentiation
SourceForge items closed this month:
SF id Resolution SF item title GO ids added, if any
582241 Fixed sequestering terms GO:0042989-42994 GO:0042996-43003
719337 Fixed definition of mRNA cap complex GO:0005845 [none]
771072 Fixed new term requests from Incyte GO:0048237-48257 GO:0048265-48268
776240 Works For Me More function ontology false paths - binding [none]
782690 Accepted nerve cell body GO:0043025
790468 Out of Date GO:0009626 [none]
795430 Works For Me negative regulation of protein binding GO:0042981-42988
795886 Works For Me negative regulation of antiviral response protein activity GO:0050687-50691
796593 Accepted PI3K complexes GO:0035030-35032
796597 Accepted URGENT: neurite GO:0042995 GO:0043005
797209 Rejected TGFbeta regulator activity [none]
797250 Accepted URGENT:CFTR Binding & Sequestering activity GO:0042980 GO:0043004
797384 Accepted new children of fertilization GO:0035036-35045
798510 Works For Me sperm storage and insemination [none]
799826 Fixed function term in process GO:0006803 [none]
800967 Accepted URGENT: regulation of apoptosis GO:0042981
802332 Accepted URGENT: calcium-dependent phospholipase A2 activation GO:0043006
803048 Accepted loss of chromatin silencing [none]
803125 Accepted new children of receptor binding GO:0042974-42975
803283 Out of Date GO:0008834/GO:0000010 [none]
807831 Fixed heart/dorsal vessel development GO:0035050-35054
808581 Accepted new synonym for DNA endoreduplication [none]
809228 Works For Me definition for oxidoreductase activity, acting on CH-OH... [none]
809236 Accepted negative regulation of lymphocyte proliferation GO:0050670-50672
810575 Accepted URGENT:activation of jak2 GO:0042976-42977
810591 Accepted induction of ornithine decarboxylase activity GO:0042978-42979
811113 Accepted EASY:urothelial cell proliferation GO:0050673-50680
811151 Accepted EASY: androgen receptor binding GO:0050681
811230 Accepted eicosatetraenoic acid binding GO:0050542-50544 GO:0050646-50648
811338 Works For Me change definition of fusome organization and biogenesis [none]
812609 Fixed change def. of Polar granule organization and biogenesis [none]
812614 Works For Me definition reference for acetate fermentation [none]
815016 Rejected glutamate carrier activity [none]
815423 Accepted GO:0046650 vs GO:0030098 [none]
815749 Works For Me Def for NADPH oxidase activity. GO:0050665
815830 Rejected UV-induced mutagenesis [none]
816551 Accepted Regulation of mRNA processing GO:0050684-50686
816622 Accepted AF2-domain binding GO:0050682-50683 GO:0050692-50693
816681 Accepted histone acetyltransferase regulator activity GO:0035033-35035
817121 Accepted testosterone 6-beta-hydroxylase activity GO:0050649
818510 Accepted URGENT: chondroitin sulfate/dermatan sulfate proteoglycan bi GO:0050650-50655
818511 Rejected URGENT: chondroitin N-acetylgalactosaminyltransferase... [none]
818546 Accepted URGENT: ATP-dependent protein binding GO:0043008
818802 Accepted EC:3.2.1.39 GO:0042973
818809 Accepted EC 3.2.1.73 GO:0042972
819239 Accepted ribosome binding GO:0043021-43024
819250 Accepted URGENT: N-acetylgalactosamine 6-O-sulfotransferase activity GO:0050659
819251 Duplicate URGENT: N-acetylgalactosamine 6-O-sulfotransferase activity [none]
819280 Accepted extra parents for GO:0006405 and GO:0006404 GO:0050657-50658
819282 Fixed possible endonuclease obsoletions? [none]
819297 Accepted URGENT: 3'-phosphoadenosine 5'-phosphosulfate binding GO:0050656
819332 Accepted possibly need new process term for rDNA maintenence GO:0043007
819481 Accepted Synonyms with ACP in it. [none]
819849 Accepted EASY:Binding terms GO:0050660-50663 GO:0043020
819863 Fixed sperm-oocyte fusion GO:0043012-43013
820521 Accepted GKB - synonym addition to "Oxygen binding" for P450 activity [none]
820545 Accepted EASY PEASY: regulation of homocysteine metabolism GO:0050666-50669
821141 Rejected URGENT: calcium channel complex [none]
821239 Accepted carbohydrate sulfation GO:0050694
821367 Accepted splicing factor protein-nucleus import GO:0035048
822702 Accepted regulation of nuclear mRNA splicing via U2-type spliceosome [none]
822733 Fixed Awful killing term names [none]
822786 Fixed Obsolete GO:0001526, proteoglycan sulfate transfer [none]
823123 Rejected Add WormBase to "Group" menu at Submit Tracker? [none]
823126 Accepted proposed definition for GO:0042003 [none]
823127 Accepted proposed definition for GO:0042004 [none]
823128 Accepted proposed definition for GO:0040038 [none]
823129 Accepted proposed definition for GO:0040035 [none]
823130 Accepted proposed definition for GO:0030539 [none]
823132 Accepted Proposed reorganization of some morphogenesis terms GO:0010171-10172
823137 Accepted request new term: "pronuclear migration" GO:0035046
823138 Accepted request new term: "centrosomal and pronuclear rotation" GO:0035047
823140 Accepted minor change, def.s of GO:0040022 + GO:0042006 [none]
823315 Fixed GO:0048193 : Golgi vesicle transport [none]
823511 Works For Me URGENT: immunoglobulin-like receptor activity [none]
823742 Fixed GO:0009625 : response to insects (0) GO:0043019
824028 Invalid add synonyms [none]
824121 Fixed Mitogen-activated protein kinase p38 binding GO:0048273
824755 Accepted EASY:children of cytokine secretion GO:0050701-50729
824763 Works For Me activation of NF-kappaB [none]
824783 Fixed dorsoventral asymmetry GO:0048262-48264
824788 Accepted EASY:CARD-domain binding GO:0050700
824793 Accepted juvenile hormone acid methyltransferase activity GO:0035049
824825 Accepted URGENT: methionine adenosyltransferase regulator GO:0048270
824827 Accepted URGENT: methionine adenosyltransferase complex GO:0048269
824973 Accepted enzoylformate decarboxylase GO:0050695
825012 Accepted trichloroethene reductive dehalogenase GO:0050697
825031 Accepted trichloroethene catabolism GO:0050696
825480 Fixed definition [none]
825547 Fixed garbled URLs [none]
825690 Accepted Moving terms from under 'sensu Mammalia' GO:0043009-43010
825731 Accepted Dendritic cell differentiation GO:0043011
826751 Accepted EASY:WW-domain binding GO:0050699
828187 Accepted sensory cilium biogenesis GO:0035058
828211 Fixed Definition for protein complex assembly ; GO:0006461 [none]
828219 Accepted EASY: gamma tubulin binding GO:0043014-43015
828236 Fixed regulation of F-actin localization [none]
828256 Fixed ACC oxidase (incorrect DBXref to EC) [none]
829247 Accepted New component terms from TAIR GO:0010168-10170
829679 Accepted VERY EASY:pos. reg. of TNF-beta biosynthesis GO:0043016-43018
829689 Accepted EASY: pos reg. peptidyl-tyrosine phosphorylation GO:0050730-50732
830899 Fixed Odd xrefs in files [none]
830930 Accepted A new child of protein domain specific binding GO:0050733
832370 Later transcription questions [none]
833035 Accepted neg.reg. caspase activation GO:0043027-43028
833046 Accepted VERY EASY; T-cell homeostasis GO:0043029
833048 Accepted 'regulation' of macrophage activation GO:0043030-43032
Statistics:
Component: 1344 terms, 82.1% defined (1104 terms defined)
Function: 7258 terms, 83.9% defined (6093 terms defined)
Process: 7959 terms, 88.7% defined (7058 terms defined)
Total: 16561 terms, 86.1% defined (14255 terms defined)
Term errors
none