GO Monthly Release Notes for April 2003
========================
Generated on Mon Oct 27 12:29:13 2003
Files used:
component old: 2.321 new: 2.341
function old: 2.632 new: 2.675
process old: 2.713 new: 2.762
definitions old: 2.993 new: 2.1081
GO Slim: Generic.0208
Key:
|----1----||----2-----||-3--||4||----5----||-----------6-----------|
GO:0009941 GO:0009536 TAIR D SF:575119 chloroplast envelope
(obs)
1. GO ID number
2. GO-slim term(s) that new term was added under or "obs" if the term is obsolete.
Terms with more than one GO-slim parent have further parents listed underneath the first parent.
3. Database that added term
4. indicates the existence of a definition for the term
5. the sourceforge request ID the term was added in response to
6. term name
Columns are tab-delimited and can be imported into Excel for ease of reading.
New terms in component ontology (62 new terms)
GO:0000775 GO:0005694 SGD D 689522 chromosome, pericentric region
GO:0000776 GO:0005694 SGD D 689522 kinetochore
GO:0000777 GO:0005694 SGD D 689522 condensed chromosome kinetochore
GO:0000778 GO:0000228 SGD D 689522 condensed nuclear chromosome kinetochore
GO:0005694
GO:0000779 GO:0005694 SGD D 689522 condensed chromosome, pericentric region
GO:0000780 GO:0000228 SGD D 689522 condensed nuclear chromosome, pericentric region
GO:0005694
GO:0000781 GO:0005694 SGD D 689522 chromosome, telomeric region
GO:0000782 GO:0005694 SGD D 689522 telomere cap complex
GO:0000783 GO:0000228 SGD D 689522 nuclear telomere cap complex
GO:0005694
GO:0000784 GO:0000228 SGD D 689522 nuclear chromosome, telomeric region
GO:0005694
GO:0000785 GO:0005694 SGD D 689522 chromatin
GO:0000786 GO:0005694 SGD D 689522 nucleosome
GO:0000787 GO:0000229 SGD D 689522 cytoplasmic nucleosome
GO:0005694
GO:0000788 GO:0000228 SGD D 689522 nuclear nucleosome
GO:0005694
GO:0000789 GO:0000229 SGD D 689522 cytoplasmic chromatin
GO:0005694
GO:0000790 GO:0000228 SGD D 689522 nuclear chromatin
GO:0005694
GO:0000791 GO:0005694 SGD D 689522 euchromatin
GO:0000792 GO:0005694 SGD D 689522 heterochromatin
GO:0000793 GO:0005694 SGD D 689522 condensed chromosome
GO:0000794 GO:0000228 SGD D 689522 condensed nuclear chromosome
GO:0005694
GO:0000795 GO:0000228 SGD D 689522 synaptonemal complex
GO:0005694
GO:0000796 GO:0005694 SGD D 689522 condensin complex
GO:0000797 GO:0005694 SGD D 689522 condensin core heterodimer
GO:0000798 GO:0000228 SGD D 689522 nuclear cohesin complex
GO:0005694
GO:0000799 GO:0000228 SGD D 689522 nuclear condensin complex
GO:0005694
GO:0000800 GO:0000228 SGD D 689522 lateral element
GO:0005694
GO:0000801 GO:0000228 SGD D 689522 central element
GO:0005694
GO:0000802 GO:0000228 SGD D 689522 transverse filament
GO:0005694
GO:0000803 GO:0005694 SGD D 689522 sex chromosome
GO:0000804 GO:0005694 SGD D 689522 W chromosome
GO:0000805 GO:0005694 SGD D 689522 X chromosome
GO:0000806 GO:0005694 SGD D 689522 Y chromosome
GO:0000807 GO:0005694 SGD D 689522 Z chromosome
GO:0000808 GO:0005694 SGD D 689522 origin of replication recognition complex
GO:0000809 GO:0000229 SGD D 689522 cytoplasmic origin of replication recognition complex
GO:0005694
GO:0030677 GO:0005622 MAH D 720618 ribonuclease P complex
GO:0030678 GO:0005622 MAH D 720618 mitochondrial ribonuclease P complex
GO:0005739
GO:0030679 GO:0005622 MAH D 720618 cyanelle ribonuclease P complex
GO:0009536
GO:0030680 GO:0005622 MAH D 720618 ribonuclease P complex (sensu Bacteria)
GO:0030681 GO:0005622 MAH D 720618 ribonuclease P complex (sensu Archaea)
GO:0042627 GO:0005615 JL D chylomicron
GO:0042629 GO:0005764 JL D 667093 mast cell granule
GO:0042641 GO:0005856 JL D 663122 actomyosin
GO:0042642 GO:0005856 JL D 663122 actomyosin, myosin component
GO:0042643 GO:0005856 JL D 663122 actomyosin, actin component
GO:0042644 GO:0005622 JL D 715291 chloroplast nucleoid
GO:0009536
GO:0042645 GO:0005622 JL D 715291 mitochondrial nucleoid
GO:0005739
GO:0042646 GO:0005622 JL D 715291 plastid nucleoid
GO:0009536
GO:0042647 GO:0005622 JL D 715291 proplastid nucleoid
GO:0009536
GO:0042648 GO:0005622 JL D 715291 chloroplast chromosome
GO:0005694
GO:0009536
GO:0042649 GO:0009536 JL D 716735 prothylakoid
GO:0009579
GO:0042650 GO:0005623 JL D 716735 prothylakoid membrane
GO:0009536
GO:0009579
GO:0042651 GO:0005623 JL D thylakoid membrane
GO:0009579
GO:0042652 GO:0005622 JL D 711285 respiratory chain complex I, peripheral segment (sensu Eukarya)
GO:0005623
GO:0005739
GO:0042653 GO:0005622 JL D 711285 respiratory chain complex I, membrane segment (sensu Eukarya)
GO:0005623
GO:0005739
GO:0042709 GO:0005737 JL D 719772 succinate-CoA ligase complex
GO:0042716 GO:0016023 JL D 663809 chromatophore
GO:0042717 GO:0005623 JL D 663809 chromatophore membrane
GO:0016023
GO:0042718 GO:0005737 JL D 665729 yolk granule
GO:0042719 GO:0005739 JL D mitochondrial intermembrane space protein transporter complex
GO:0042720 GO:0005623 JL D mitochondrial inner membrane peptidase complex
GO:0005739
GO:0042721 GO:0005623 JL D mitochondrial inner membrane protein insertion complex
GO:0005739
New obsoletions in component ontology
GO:0000230, nuclear mitotic chromosome: is based on a temporal division of the cell cycle.
GO:0000231, cytoplasmic mitotic chromosome: is based on a temporal division of the cell cycle.
GO:0000232, nuclear interphase chromosome: is based on a temporal division of the cell cycle.
GO:0000233, cytoplasmic interphase chromosome: is based on a temporal division of the cell cycle.
GO:0005676, condensin complex: the definition is too specific - other organisms have condensin complexes.
GO:0005695, chromatid: is not a unique subcellular component.
GO:0005696, telomere: This term was obsoleted because the definition was too sequence oriented and too restrictive.
GO:0005698, centromere: is genetically defined region and not a specific subcellular localization.
GO:0005699, kinetochore: its definition was too specific. Kinetochores are also involved in meiosis.
GO:0005707, interphase chromosome: is based on a temporal division of the cell cycle.
GO:0005708, mitotic chromosome: is based on a process.
GO:0005709, prophase chromosome: is based on a temporal division of the cell cycle.
GO:0005710, metaphase chromosome: is based on a temporal division of the cell cycle.
GO:0005711, meiotic chromosome: is based on a process.
GO:0005716, synaptonemal complex: the definition is not true for every organism.
GO:0005717, chromatin: the definition is too specific. To update annotation, consider the cellular component term 'chromatin ; GO:0000785' and its children.
GO:0005718, nucleosome: its definition is too specific - in addition to these common histones mentioned in the definition, there are histone variants.
GO:0008621, condensin core heterodimer: the definition is too specific - other organisms have condensins as well.
Term name changes in component ontology
GO:0000172: ribonuclease mitochondrial RNA processing complex --> ribonuclease MRP complex
GO:0000274: hydrogen-transporting ATP synthase, stator stalk (sensu Eukarya) --> proton-transporting ATP synthase, stator stalk (sensu Eukarya)
GO:0000276: proton-transporting ATP synthase complex, coupling factor F(0) (sensu Eukarya) --> proton-transporting ATP synthase complex, coupling factor F(o) (sensu Eukarya)
GO:0005655: ribonuclease P complex --> nucleolar ribonuclease P complex
GO:0005664: origin recognition complex --> nuclear origin of replication recognition complex
GO:0005719: euchromatin --> nuclear euchromatin
GO:0005720: heterochromatin --> nuclear heterochromatin
GO:0005724: telomeric heterochromatin --> nuclear telomeric heterochromatin
GO:0005744: mitochondrial inner membrane translocase complex --> mitochondrial inner membrane pre-sequence translocase complex
GO:0005746: mitochondrial electron transport chain complex (sensu Eukarya) --> mitochondrial electron transport chain
GO:0005754: hydrogen-transporting ATP synthase, catalytic core (sensu Eukarya) --> proton-transporting ATP synthase, catalytic core (sensu Eukarya)
GO:0005756: hydrogen-transporting ATP synthase, central stalk (sensu Eukarya) --> proton-transporting ATP synthase, central stalk (sensu Eukarya)
GO:0005802: Golgi trans-face --> Golgi trans face
GO:0005926: connecting hemiadherens junction --> connecting hemi-adherens junction
GO:0005928: apical hemiadherens junction --> apical hemi-adherens junction
GO:0016469: hydrogen-transporting two-sector ATPase complex --> proton-transporting two-sector ATPase complex
GO:0045211: post-synaptic membrane --> postsynaptic membrane
GO:0045263: proton-transporting ATP synthase complex, coupling factor F(0) --> proton-transporting ATP synthase complex, coupling factor F(o)
GO:0045264: proton-transporting ATP synthase complex, coupling factor F(0) (sensu Bacteria) --> proton-transporting ATP synthase complex, coupling factor F(o) (sensu Bacteria)
GO:0045265: hydrogen-transporting ATP synthase, stator stalk --> proton-transporting ATP synthase, stator stalk
GO:0045266: hydrogen-transporting ATP synthase, stator stalk (sensu Bacteria) --> proton-transporting ATP synthase, stator stalk (sensu Bacteria)
GO:0045267: hydrogen-transporting ATP synthase, catalytic core --> proton-transporting ATP synthase, catalytic core
GO:0045268: hydrogen-transporting ATP synthase, catalytic core (sensu Bacteria) --> proton-transporting ATP synthase, catalytic core (sensu Bacteria)
GO:0045269: hydrogen-transporting ATP synthase, central stalk --> proton-transporting ATP synthase, central stalk
GO:0045270: hydrogen-transporting ATP synthase, central stalk (sensu Bacteria) --> proton-transporting ATP synthase, central stalk (sensu Bacteria)
New definitions for component ontology terms (19 new definitions)
GO:0005664, nuclear origin of replication recognition complex
GO:0005713, recombination nodule
GO:0005714, early recombination nodule
GO:0005715, late recombination nodule
GO:0005742, mitochondrial outer membrane translocase complex
GO:0005745, m-AAA complex
GO:0005967, pyruvate dehydrogenase complex (sensu Eukarya)
GO:0009571, proplastid stroma
GO:0009575, chromoplast stroma
GO:0009578, etioplast stroma
GO:0010005, cortical microtubule (sensu Viridiplantae)
GO:0010006, toc complex
GO:0010007, magnesium chelatase complex
GO:0010009, external side of endosome membrane
GO:0042170, plastid membrane
GO:0042575, DNA polymerase complex
GO:0045244, succinate-CoA ligase complex (GDP-forming)
GO:0045250, pyruvate dehydrogenase complex (sensu Bacteria)
GO:0045254, pyruvate dehydrogenase complex
New term merges in component ontology
GO:0005748 has been merged into GO:0005747, respiratory chain complex I (sensu Eukarya)
GO:0008136 has been merged into GO:0005749, respiratory chain complex II (sensu Eukarya)
GO:0008325 has been merged into GO:0045244, succinate-CoA ligase complex (GDP-forming)
GO:0009362 has been merged into GO:0005749, respiratory chain complex II (sensu Eukarya)
GO:0009364 has been merged into GO:0045254, pyruvate dehydrogenase complex
GO:0016470 has been merged into GO:0005753, proton-transporting ATP synthase complex (sensu Eukarya)
GO:0019738 has been merged into GO:0005749, respiratory chain complex II (sensu Eukarya)
GO:0045245 has been merged into GO:0045244, succinate-CoA ligase complex (GDP-forming)
Term movements in component ontology:
Terms movements under GO Slim term 'nuclear chromosome ; GO:0000228'
- GO:0000230, nuclear mitotic chromosome
- GO:0000232, nuclear interphase chromosome
+ GO:0001739, sex chromatin
+ GO:0001740, Barr body
+ GO:0001741, XY body
+ GO:0005664, nuclear origin of replication recognition complex
+ GO:0005712, chiasma
+ GO:0005713, recombination nodule
+ GO:0005714, early recombination nodule
+ GO:0005715, late recombination nodule
+ GO:0005719, nuclear euchromatin
+ GO:0005720, nuclear heterochromatin
+ GO:0005721, centric heterochromatin
+ GO:0005722, beta-heterochromatin
+ GO:0005723, alpha-heterochromatin
+ GO:0005724, nuclear telomeric heterochromatin
+ GO:0005725, intercalary heterochromatin
+ GO:0005726, perichromatin fibrils
Terms movements under GO Slim term 'cytoplasmic chromosome ; GO:0000229'
- GO:0000231, cytoplasmic mitotic chromosome
- GO:0000233, cytoplasmic interphase chromosome
Terms movements under GO Slim term 'intracellular ; GO:0005622'
+ GO:0000262, mitochondrial chromosome
- GO:0005947, alpha-ketoglutarate dehydrogenase complex (sensu Eukarya)
- GO:0005962, isocitrate dehydrogenase complex (NAD+) (sensu Eukarya)
+ GO:0009508, plastid chromosome
- GO:0030062, TCA cycle enzyme complex (sensu Eukarya)
- GO:0045239, TCA cycle enzyme complex
- GO:0045240, alpha-ketoglutarate dehydrogenase complex
- GO:0045241, alpha-ketoglutarate dehydrogenase complex (sensu Bacteria)
- GO:0045242, isocitrate dehydrogenase complex (NAD+)
- GO:0045243, isocitrate dehydrogenase complex (NAD+) (sensu Bacteria)
- GO:0045244, succinate-CoA ligase complex (GDP-forming)
- GO:0045246, TCA cycle enzyme complex (sensu Bacteria)
Terms movements under GO Slim term 'cell ; GO:0005623'
+ GO:0009503, light-harvesting complex (sensu Viridiplantae)
+ GO:0009517, PSII associated light-harvesting complex II
+ GO:0009518, PSI associated light-harvesting complex I
+ GO:0009535, thylakoid membrane (sensu Viridiplantae)
+ GO:0009655, PSII associated light-harvesting complex II, core complex
+ GO:0009656, PSII associated light-harvesting complex II, peripheral complex
+ GO:0030083, PSI associated light-harvesting complex I, LHCIa subcomplex
+ GO:0030084, PSI associated light-harvesting complex I, LHCIb subcomplex
+ GO:0030085, PSII associated light-harvesting complex II, peripheral complex, LHCIIb subcomplex
+ GO:0030086, PSII associated light-harvesting complex II, core complex, LHCIIa subcomplex
+ GO:0030087, PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex
+ GO:0030088, PSII associated light-harvesting complex II, core complex, LHCIId subcomplex
+ GO:0030093, photosystem I (sensu Viridiplantae)
+ GO:0030095, photosystem II (sensu Viridiplantae)
Terms movements under GO Slim term 'nucleus ; GO:0005634'
+ GO:0000333, telomerase catalytic core complex
- GO:0005676, condensin complex
+ GO:0005697, telomerase holoenzyme complex
- GO:0008278, cohesin complex
- GO:0008280, cohesin core heterodimer
- GO:0008621, condensin core heterodimer
Terms movements under GO Slim term 'chromosome ; GO:0005694'
- GO:0000230, nuclear mitotic chromosome
- GO:0000231, cytoplasmic mitotic chromosome
- GO:0000232, nuclear interphase chromosome
- GO:0000233, cytoplasmic interphase chromosome
- GO:0000333, telomerase catalytic core complex
+ GO:0005664, nuclear origin of replication recognition complex
- GO:0005676, condensin complex
- GO:0005695, chromatid
- GO:0005696, telomere
- GO:0005697, telomerase holoenzyme complex
- GO:0005698, centromere
- GO:0005699, kinetochore
- GO:0005707, interphase chromosome
- GO:0005708, mitotic chromosome
- GO:0005709, prophase chromosome
- GO:0005710, metaphase chromosome
- GO:0005711, meiotic chromosome
- GO:0005716, synaptonemal complex
- GO:0005717, chromatin
- GO:0005718, nucleosome
- GO:0008621, condensin core heterodimer
Terms movements under GO Slim term 'cytoplasm ; GO:0005737'
+ GO:0005659, delta DNA polymerase complex
+ GO:0005660, delta-DNA polymerase cofactor complex
+ GO:0005947, alpha-ketoglutarate dehydrogenase complex (sensu Eukarya)
+ GO:0005960, glycine cleavage system complex
+ GO:0005961, glycine dehydrogenase complex (decarboxylating)
+ GO:0005962, isocitrate dehydrogenase complex (NAD+) (sensu Eukarya)
+ GO:0008622, epsilon DNA polymerase complex
+ GO:0009340, DNA topoisomerase IV complex
+ GO:0009345, glycine-tRNA ligase complex
+ GO:0009355, DNA polymerase V complex
+ GO:0009360, DNA polymerase III complex
+ GO:0009361, succinate-CoA ligase complex (ADP-forming)
+ GO:0016035, zeta DNA polymerase complex
+ GO:0018444, translation release factor complex
+ GO:0030062, TCA cycle enzyme complex (sensu Eukarya)
+ GO:0042575, DNA polymerase complex
+ GO:0045239, TCA cycle enzyme complex
+ GO:0045240, alpha-ketoglutarate dehydrogenase complex
+ GO:0045242, isocitrate dehydrogenase complex (NAD+)
+ GO:0045244, succinate-CoA ligase complex (GDP-forming)
Terms movements under GO Slim term 'mitochondrion ; GO:0005739'
+ GO:0045244, succinate-CoA ligase complex (GDP-forming)
Terms movements under GO Slim term 'unlocalized ; GO:0005941'
- GO:0005659, delta DNA polymerase complex
- GO:0005660, delta-DNA polymerase cofactor complex
- GO:0005960, glycine cleavage system complex
- GO:0005961, glycine dehydrogenase complex (decarboxylating)
- GO:0008622, epsilon DNA polymerase complex
- GO:0009340, DNA topoisomerase IV complex
- GO:0009345, glycine-tRNA ligase complex
- GO:0009355, DNA polymerase V complex
- GO:0009360, DNA polymerase III complex
- GO:0009361, succinate-CoA ligase complex (ADP-forming)
- GO:0016035, zeta DNA polymerase complex
- GO:0018444, translation release factor complex
- GO:0042575, DNA polymerase complex
Terms movements under GO Slim term 'plastid ; GO:0009536'
- GO:0020023, kinetoplast
New terms in function ontology (37 new terms)
GO:0000810 GO:0003824 SGD D 716795 diacylglycerol pyrophosphate phosphatase activity
GO:0001758 GO:0003824 MGI D retinal dehydrogenase activity
GO:0030674 GO:0005515 MAH D 718356 protein binding activity, bridging
GO:0030675 GO:0004871 MAH D 718138 Rac GTPase activator activity
GO:0030234
GO:0030676 GO:0000166 MAH D 718138 Rac guanyl-nucleotide exchange factor activity
GO:0004871
GO:0042623 GO:0000166 JL D 604591 ATPase activity, coupled
GO:0003824
GO:0042624 GO:0000166 JL D 604591 ATPase activity, uncoupled
GO:0003824
GO:0042625 GO:0000166 JL D 604591 ATPase activity, coupled to transmembrane movement of ions
GO:0003824
GO:0042626 GO:0000166 JL D 604591 ATPase activity, coupled to transmembrane movement of substances
GO:0003824
GO:0042654 GO:0004872 JL D ecdysis-triggering hormone receptor activity
GO:0005488
GO:0042656 GO:0004672 JL D 718402 JUN kinase kinase kinase kinase activity
GO:0004871
GO:0042657 GO:0005102 JL D 671730 MHC class II protein binding activity, via lateral surface
GO:0042658 GO:0005102 JL D 671730 MHC class II protein binding activity, via antigen binding groove
GO:0042708 GO:0008233 JL D 725539 elastase activity
GO:0046904 GO:0005488 AI D calcium oxalate binding activity
GO:0046905 GO:0003824 AI D 714668 phytoene synthase activity
GO:0046906 GO:0005488 AI D 692953 tetrapyrrole binding activity
GO:0046910 GO:0030234 AI D 711454 pectinesterase inhibitor activity
GO:0046911 GO:0005488 AI D 716730 metal chelating activity
GO:0046912 GO:0003824 AI D transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
GO:0046913 GO:0003824 AI D 720612 ATP citrate synthase activity
GO:0046914 GO:0005488 AI D 692950 transition metal ion binding activity
GO:0046915 GO:0005215 AI D 692950 transition metal ion transporter activity
GO:0046917 GO:0003824 AI D 723317 triphosphoribosyl-dephospho-CoA synthase activity
GO:0046919 GO:0003824 AI D 730096 pyruvyltransferase
GO:0046920 GO:0003824 AI D alpha(1,3)-fucosyltransferase
GO:0046921 GO:0003824 AI D alpha(1,6)-fucosyltransferase
GO:0046922 GO:0003824 AI D peptide-O-fucosyltransferase
GO:0048028 GO:0030246 JIC D 698815 galacturonan binding activity
GO:0048029 GO:0030246 JIC D 698815 monosaccharide binding activity
GO:0048030 GO:0030246 JIC D 698815 disaccharide binding activity
GO:0048031 GO:0030246 JIC D 698815 trisaccharide binding activity
GO:0048032 GO:0030246 JIC D 698815 galacturonate binding activity
GO:0048037 GO:0005488 JIC D 706179 cofactor binding activity
GO:0048038 GO:0005488 JIC D 706179 quinone binding activity
GO:0048039 GO:0005488 JIC D 706179 ubiquinone binding activity
GO:0048040 GO:0003824 JIC D 698283 UDP-glucuronic acid decarboxylase activity
New obsoletions in function ontology
GO:0000260, hydrogen-translocating V-type ATPase activity: represents a gene product.
GO:0000261, sodium-translocating V-type ATPase activity: represents a gene product.
GO:0004007, heavy metal-exporting ATPase activity: 'heavy metal' is an ambiguous grouping term which has no set meaning (see Pure Appl. Chem. Vol. 74, No. 5, pp. 793-807, 2002, for more information).
GO:0004717, focal adhesion kinase activity: represents a gene product, and because the gene was named after its location of action rather than after it's molecular function.
GO:0005373, heavy metal ion porter activity: represents a gene product and not a molecular function.
GO:0005505, heavy metal binding activity: 'heavy metal' is an ambiguous grouping term which has no set meaning (see Pure Appl. Chem. Vol. 74, No. 5, pp. 793-807, 2002, for more information).
GO:0008724, DNA topoisomerase IV activity: represents a gene product.
GO:0015076, heavy metal ion transporter activity: 'heavy metal' is an ambiguous grouping term which has no set meaning (see Pure Appl. Chem. Vol. 74, No. 5, pp. 793-807, 2002, for more information).
GO:0015335, heavy metal ion:hydrogen symporter activity: represents a gene product and not a molecular function.
GO:0015336, high affinity metal ion uptake transporter activity: represents a gene product and not a molecular function.
GO:0015337, low affinity metal ion uptake transporter activity: represents a gene product and not a molecular function.
GO:0015442, hydrogen-/sodium-translocating ATPase activity: is a redundant grouping term based on a TC-DB classification.
GO:0016466, hydrogen-translocating A-type ATPase activity: represents a gene product.
GO:0016467, hydrogen-translocating F-type ATPase activity: represents a gene product.
GO:0016468, sodium-translocating F-type ATPase activity: represents a gene product.
GO:0017021, myosin phosphatase myosin binding activity: describes the binding of myosin phosphatase to myosin, which is not a molecular function. To update annotation, consider the molecular function terms 'myosin binding activity ; GO:0017022' and 'myosin phosphatase ; GO:0017018'.
GO:0030400, protease substrate recruitment factor activity: represents a gene product.
Term name changes in function ontology
GO:0003917: DNA topoisomerase I activity --> DNA topoisomerase type I activity
GO:0003918: DNA topoisomerase (ATP-hydrolyzing) activity --> DNA topoisomerase type II activity
GO:0003936: hydrogen-transporting two-sector ATPase activity --> hydrogen-transporting ATPase activity
GO:0004706: JNK kinase kinase activity --> JUN kinase kinase kinase activity
GO:0004852: uroporphyringonen-III synthase activity --> uroporphyrinogen-III synthase activity
GO:0005087: RAN guanyl-nucleotide exchange factor activity --> Ran guanyl-nucleotide exchange factor activity
GO:0005088: RAS guanyl-nucleotide exchange factor activity --> Ras guanyl-nucleotide exchange factor activity
GO:0005090: SAR guanyl-nucleotide exchange factor activity --> Sar guanyl-nucleotide exchange factor activity
GO:0005097: RAB GTPase activator activity --> Rab GTPase activator activity
GO:0005098: RAN GTPase activator activity --> Ran GTPase activator activity
GO:0005099: RAS GTPase activator activity --> Ras GTPase activator activity
GO:0005101: SAR GTPase activator activity --> Sar GTPase activator activity
GO:0005285: sodium/excitatory amino acid cotransporter activity --> sodium/excitatory amino acid symporter activity
GO:0005311: sodium:dicarboxylate/tricarboxylate cotransporter activity --> sodium:dicarboxylate/tricarboxylate symporter activity
GO:0005361: trans-epithelial hydrogen:glucose transporter activity --> transepithelial hydrogen:glucose transporter activity
GO:0008027: sodium/excitatory glutamate cotransporter activity --> sodium/excitatory glutamate symporter activity
GO:0008094: DNA dependent adenosinetriphosphatase activity --> DNA dependent ATPase activity
GO:0008186: RNA dependent adenosinetriphosphatase activity --> RNA dependent ATPase activity
GO:0008321: RAL guanyl-nucleotide exchange factor activity --> Ral guanyl-nucleotide exchange factor activity
GO:0008510: sodium:bicarbonate cotransporter activity --> sodium:bicarbonate symporter activity
GO:0008965: phosphoenolpyruvate-protein phosphatase activity --> phosphoenolpyruvate-protein phosphotransferase activity
GO:0009492: Fe2S2 electron transfer carrier --> 2Fe-2S electron transfer carrier
GO:0009495: thioredoxin-like Fe2S2 ferredoxin --> thioredoxin-like 2Fe-2S ferredoxin
GO:0009497: Fe3S4/Fe4S4 electron transfer carrier --> 3Fe-4S/4Fe-4S electron transfer carrier
GO:0015249: non-selective channel activity --> nonselective channel activity
GO:0015281: non-selective cation channel activity --> nonselective cation channel activity
GO:0015361: low affinity sodium:dicarboxylate cotransporter activity --> low affinity sodium:dicarboxylate symporter activity
GO:0015362: high affinity sodium:dicarboxylate cotransporter activity --> high affinity sodium:dicarboxylate symporter activity
GO:0015377: cation:chloride cotransporter activity --> cation:chloride symporter activity
GO:0015382: sodium:sulfate cotransporter activity --> sodium:sulfate symporter activity
GO:0015443: sodium-transporting two-sector ATPase activity --> sodium-transporting ATPase activity
GO:0016501: prostacylin receptor activity --> prostacyclin receptor activity
GO:0017034: RAP guanyl-nucleotide exchange factor activity --> Rap guanyl-nucleotide exchange factor activity
GO:0017060: galactoside 3(4)-L-fucosyltransferase activity --> 3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity
GO:0017083: galactoside 3-L-fucosyltransferase activity --> 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity
GO:0017112: RAB guanyl-nucleotide exchange factor activity --> Rab guanyl-nucleotide exchange factor activity
GO:0017123: RAL GTPase activator activity --> Ral GTPase activator activity
GO:0017153: sodium:dicarboxylate cotransporter activity --> sodium:dicarboxylate symporter activity
GO:0017168: 5-oxoprolinase (ATP-hydrolysing) activity --> 5-oxoprolinase (ATP-hydrolyzing) activity
GO:0046582: RAP GTPase activator activity --> Rap GTPase activator activity
New definitions for function ontology terms (67 new definitions)
GO:0000031, mannosylphosphate transferase activity
GO:0000260, hydrogen-translocating V-type ATPase activity
GO:0000261, sodium-translocating V-type ATPase activity
GO:0003916, DNA topoisomerase activity
GO:0004705, JUN kinase activity
GO:0004706, JUN kinase kinase kinase activity
GO:0004717, focal adhesion kinase activity
GO:0004738, pyruvate dehydrogenase activity
GO:0004857, enzyme inhibitor activity
GO:0005086, ARF guanyl-nucleotide exchange factor activity
GO:0005087, Ran guanyl-nucleotide exchange factor activity
GO:0005088, Ras guanyl-nucleotide exchange factor activity
GO:0005089, Rho guanyl-nucleotide exchange factor activity
GO:0005090, Sar guanyl-nucleotide exchange factor activity
GO:0005095, GTPase inhibitor activity
GO:0005096, GTPase activator activity
GO:0005097, Rab GTPase activator activity
GO:0005098, Ran GTPase activator activity
GO:0005099, Ras GTPase activator activity
GO:0005100, Rho GTPase activator activity
GO:0005101, Sar GTPase activator activity
GO:0005476, carnitine/acyl carnitine carrier activity
GO:0005544, calcium-dependent phospholipid binding activity
GO:0008060, ARF GTPase activator activity
GO:0008321, Ral guanyl-nucleotide exchange factor activity
GO:0008410, CoA-transferase activity
GO:0008411, 4-hydroxybutyrate CoA-transferase activity
GO:0008414, CDP-alcohol phosphotransferase activity
GO:0008665, 2'-phosphotransferase activity
GO:0008828, dATP pyrophosphohydrolase activity
GO:0008913, lauroyl transferase activity
GO:0010010, lysine-ketoglutarate reductase activity
GO:0010011, auxin binding activity
GO:0010012, steroid 22-alpha hydroxylase
GO:0010013, N-1-naphthylphthalamic acid binding activity
GO:0015462, protein-transporting ATPase activity
GO:0015616, DNA translocase activity
GO:0016466, hydrogen-translocating A-type ATPase activity
GO:0016467, hydrogen-translocating F-type ATPase activity
GO:0016468, sodium-translocating F-type ATPase activity
GO:0016741, transferase activity, transferring one-carbon groups
GO:0016744, transferase activity, transferring aldehyde or ketonic groups
GO:0016746, transferase activity, transferring acyl groups
GO:0016747, transferase activity, transferring groups other than amino-acyl groups
GO:0016755, transferase activity, transferring amino-acyl groups
GO:0016757, transferase activity, transferring glycosyl groups
GO:0016758, transferase activity, transferring hexosyl groups
GO:0016763, transferase activity, transferring pentosyl groups
GO:0016764, transferase activity, transferring other glycosyl groups
GO:0016765, transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016766, transferase activity, transferring alkyl or aryl groups, other than methyl groups
GO:0016769, transferase activity, transferring nitrogenous groups
GO:0016772, transferase activity, transferring phosphorus-containing groups
GO:0016773, phosphotransferase activity, alcohol group as acceptor
GO:0016774, phosphotransferase activity, carboxyl group as acceptor
GO:0016775, phosphotransferase activity, nitrogenous group as acceptor
GO:0016776, phosphotransferase activity, phosphate group as acceptor
GO:0016779, nucleotidyltransferase activity
GO:0016782, transferase activity, transferring sulfur-containing groups
GO:0016785, transferase activity, transferring selenium-containing groups
GO:0017021, myosin phosphatase myosin binding activity
GO:0017034, Rap guanyl-nucleotide exchange factor activity
GO:0017112, Rab guanyl-nucleotide exchange factor activity
GO:0017116, single-stranded DNA dependent ATP dependent DNA helicase activity
GO:0017123, Ral GTPase activator activity
GO:0019176, dihydroneopterin monophosphate phosphatase activity
GO:0046582, Rap GTPase activator activity
New term merges in function ontology
GO:0004002 has been merged into GO:0016887, ATPase activity
GO:0008958 has been merged into GO:0008897, holo-[acyl-carrier protein] synthase activity
Term movements in function ontology:
Terms movements under GO Slim term 'nucleotide binding activity ; GO:0000166'
- GO:0000260, hydrogen-translocating V-type ATPase activity
- GO:0000261, sodium-translocating V-type ATPase activity
- GO:0004007, heavy metal-exporting ATPase activity
+ GO:0008722, DNA helicase IV activity
- GO:0015442, hydrogen-/sodium-translocating ATPase activity
- GO:0016466, hydrogen-translocating A-type ATPase activity
- GO:0016467, hydrogen-translocating F-type ATPase activity
- GO:0016468, sodium-translocating F-type ATPase activity
Terms movements under GO Slim term 'enzyme activity ; GO:0003824'
- GO:0000260, hydrogen-translocating V-type ATPase activity
- GO:0000261, sodium-translocating V-type ATPase activity
- GO:0004007, heavy metal-exporting ATPase activity
+ GO:0004741, pyruvate dehydrogenase (lipoamide) phosphatase activity
- GO:0008724, DNA topoisomerase IV activity
- GO:0015442, hydrogen-/sodium-translocating ATPase activity
- GO:0016466, hydrogen-translocating A-type ATPase activity
- GO:0016467, hydrogen-translocating F-type ATPase activity
- GO:0016468, sodium-translocating F-type ATPase activity
+ GO:0019906, pyruvate dehydrogenase (lipoamide) phosphatase, catalyst activity
+ GO:0019909, pyruvate dehydrogenase (lipoamide) phosphatase, regulator activity
Terms movements under GO Slim term 'protein kinase activity ; GO:0004672'
- GO:0004717, focal adhesion kinase activity
Terms movements under GO Slim term 'protein phosphatase activity ; GO:0004721'
- GO:0004741, pyruvate dehydrogenase (lipoamide) phosphatase activity
- GO:0008965, phosphoenolpyruvate-protein phosphotransferase activity
- GO:0017021, myosin phosphatase myosin binding activity
- GO:0019906, pyruvate dehydrogenase (lipoamide) phosphatase, catalyst activity
- GO:0019909, pyruvate dehydrogenase (lipoamide) phosphatase, regulator activity
Terms movements under GO Slim term 'signal transducer activity ; GO:0004871'
+ GO:0004710, MAP/ERK kinase kinase activity
- GO:0004717, focal adhesion kinase activity
Terms movements under GO Slim term 'transporter activity ; GO:0005215'
- GO:0000260, hydrogen-translocating V-type ATPase activity
- GO:0000261, sodium-translocating V-type ATPase activity
- GO:0004007, heavy metal-exporting ATPase activity
- GO:0005373, heavy metal ion porter activity
- GO:0015076, heavy metal ion transporter activity
- GO:0015335, heavy metal ion:hydrogen symporter activity
- GO:0015336, high affinity metal ion uptake transporter activity
- GO:0015337, low affinity metal ion uptake transporter activity
- GO:0015442, hydrogen-/sodium-translocating ATPase activity
- GO:0016466, hydrogen-translocating A-type ATPase activity
- GO:0016467, hydrogen-translocating F-type ATPase activity
- GO:0016468, sodium-translocating F-type ATPase activity
Terms movements under GO Slim term 'binding activity ; GO:0005488'
- GO:0005505, heavy metal binding activity
Terms movements under GO Slim term 'cytoskeletal protein binding activity ; GO:0008092'
- GO:0017021, myosin phosphatase myosin binding activity
Terms movements under GO Slim term 'lysin activity ; GO:0015465'
- GO:0015465, lysin activity
- GO:0015466, autolysin activity
- GO:0015470, bacteriocin activity
- GO:0015642, bacteriolytic toxin activity
Terms movements under GO Slim term 'enzyme regulator activity ; GO:0030234'
+ GO:0015465, lysin activity
+ GO:0015466, autolysin activity
+ GO:0015470, bacteriocin activity
+ GO:0015642, bacteriolytic toxin activity
- GO:0030400, protease substrate recruitment factor activity
New terms in process ontology (158 new terms)
GO:0001756 GO:0007275 MGI D somitogenesis
GO:0001757 GO:0007275 MGI D somite specification
GO:0010033 GO:0009628 TAIR D 661794 response to organic substance
GO:0010034 GO:0009628 TAIR D 661794 response to acetate
GO:0010035 GO:0009628 TAIR D 661794 response to inorganic substance
GO:0010036 GO:0009628 TAIR D 661794 response to boron
GO:0010037 GO:0009628 TAIR D 661794 response to carbon dioxide
GO:0010038 GO:0009628 TAIR D 661794 response to metal ion
GO:0010039 GO:0009628 TAIR D 661794 response to iron ion
GO:0010040 GO:0009628 TAIR D 661794 response to iron(II) ion
GO:0010041 GO:0009628 TAIR D 661794 response to iron(III) ion
GO:0010042 GO:0009628 TAIR D 661794 response to manganese ion
GO:0010043 GO:0009628 TAIR D 661794 response to zinc ion
GO:0010044 GO:0009628 TAIR D 661794 response to aluminium ion
GO:0010045 GO:0009628 TAIR D 661794 response to nickel ion
GO:0010046 GO:0009628 TAIR D 661794 response to mycotoxin
GO:0010047 GO:0007582 TAIR D fruit dehiscence
GO:0010048 GO:0006950 TAIR D vernalization response
GO:0009628
GO:0010049 GO:0007275 TAIR D acquisition of reproductive competence
GO:0010050 GO:0007275 TAIR D vegetative phase change
GO:0010051 GO:0007275 TAIR D vascular tissue pattern formation (sensu Tracheophyta)
GO:0010052 GO:0007275 TAIR D guard cell differentiation
GO:0030154
GO:0010053 GO:0007275 TAIR D root epidermal cell differentiation
GO:0030154
GO:0010054 GO:0007275 TAIR D trichoblast differentiation
GO:0030154
GO:0010055 GO:0007275 TAIR D atrichoblast differentiation
GO:0030154
GO:0010056 GO:0007275 TAIR D atrichoblast fate specification
GO:0030154
GO:0010057 GO:0007275 TAIR D trichoblast fate specification
GO:0030154
GO:0010058 GO:0007275 TAIR D regulation of atrichoblast fate
GO:0030154
GO:0010059 GO:0007275 TAIR D positive regulation of atrichoblast fate
GO:0030154
GO:0010060 GO:0007275 TAIR D negative regulation of atrichoblast fate
GO:0030154
GO:0010061 GO:0007275 TAIR D regulation of trichoblast fate
GO:0030154
GO:0010062 GO:0007275 TAIR D negative regulation of trichoblast fate
GO:0030154
GO:0010063 GO:0007275 TAIR D positive regulation of trichoblast fate
GO:0030154
GO:0010064 GO:0007275 TAIR D embryonic shoot morphogenesis
GO:0010065 GO:0007275 TAIR D primary meristem histogenesis
GO:0010066 GO:0007275 TAIR D ground meristem histogenesis
GO:0010067 GO:0007275 TAIR D procambium histogenesis
GO:0010068 GO:0007275 TAIR D protoderm histogenesis
GO:0010069 GO:0007275 TAIR D zygote asymmetric cytokinesis (sensu Magnoliophyta)
GO:0008283
GO:0010070 GO:0008283 TAIR D zygote asymmetric cytokinesis
GO:0010071 GO:0007275 TAIR D root meristem specification
GO:0010072 GO:0007275 TAIR D primary shoot apical meristem specification
GO:0010073 GO:0007275 TAIR D meristem maintenance
GO:0010074 GO:0007275 TAIR D 653499 maintenance of meristem identity
GO:0010075 GO:0007275 TAIR D regulation of meristem size
GO:0010076 GO:0007275 TAIR D maintenance of floral meristem identity
GO:0010077 GO:0007275 TAIR D maintenance of inflorescence meristem identity
GO:0010078 GO:0007275 TAIR D maintenance of root meristem identity
GO:0010079 GO:0007275 TAIR D maintenance of vegetative meristem identity
GO:0010080 GO:0007275 TAIR D regulation of floral meristem size
GO:0010081 GO:0007275 TAIR D regulation of inflorescence meristem size
GO:0010082 GO:0007275 TAIR D regulation of root meristem size
GO:0010083 GO:0007275 TAIR D regulation of vegetative meristem size
GO:0010084 GO:0007275 TAIR D specification of organ axis polarity
GO:0010085 GO:0007275 TAIR D polarity specification of the proximal/distal axis
GO:0010086 GO:0007275 TAIR D embryonic root morphogenesis
GO:0010087 GO:0007275 TAIR D vascular tissue histogenesis (sensu Tracheophyta)
GO:0010088 GO:0007275 TAIR D phloem histogenesis
GO:0010089 GO:0007275 TAIR D xylem histogenesis
GO:0010090 GO:0007275 TAIR D trichome morphogenesis
GO:0030154
GO:0010091 GO:0007275 TAIR D trichome branching
GO:0030154
GO:0010092 GO:0007275 TAIR D specification of organ identity
GO:0010093 GO:0007275 TAIR D specification of floral organ identity
GO:0010094 GO:0007275 TAIR D specification of carpel identity
GO:0010095 GO:0007275 TAIR D specification of petal identity
GO:0010096 GO:0007275 TAIR D specification of sepal identity
GO:0010097 GO:0007275 TAIR D specification of stamen identity
GO:0010098 GO:0007275 TAIR D suspensor development
GO:0010099 GO:0007275 TAIR D regulation of photomorphogenesis
GO:0009628
GO:0010100 GO:0007275 TAIR D negative regulation of photomorphogenesis
GO:0009628
GO:0010101 GO:0007275 TAIR D post-embryonic root morphogenesis
GO:0010102 GO:0007275 TAIR D lateral root morphogenesis
GO:0010103 GO:0007275 TAIR D stomatal complex morphogenesis
GO:0042628 GO:0007275 JL D mating plug formation
GO:0007610
GO:0042630 GO:0006950 JL D 707740 behavioral response to water deprivation
GO:0007610
GO:0009628
GO:0042631 GO:0006950 JL D 707740 cellular response to water deprivation
GO:0007154
GO:0009605
GO:0009628
GO:0042632 GO:0007582 JL D 707740 cholesterol homeostasis
GO:0042633 GO:0007582 JL D 707740 hair cycle
GO:0042634 GO:0007582 JL D 707740 regulation of hair cycle
GO:0042635 GO:0007582 JL D 707740 positive regulation of hair cycle
GO:0042636 GO:0007582 JL D 707740 negative regulation of hair cycle
GO:0042637 GO:0007582 JL D 707740 catagen
GO:0042638 GO:0007582 JL D 707740 exogen
GO:0042639 GO:0007582 JL D 707740 telogen
GO:0042640 GO:0007582 JL D 707740 anagen
GO:0042655 GO:0007165 JL D 718402 activation of JUNKKK
GO:0042659 GO:0030154 JL D 643599 regulation of cell fate
GO:0042660 GO:0030154 JL D 643599 positive regulation of cell fate
GO:0042661 GO:0030154 JL D 643599 regulation of mesoderm cell fate
GO:0042662 GO:0030154 JL D 643599 negative regulation of mesoderm cell fate
GO:0042663 GO:0030154 JL D 643599 regulation of endoderm cell fate
GO:0042664 GO:0030154 JL D 643599 negative regulation of endoderm cell fate
GO:0042665 GO:0030154 JL D 643599 regulation of ectoderm cell fate
GO:0042666 GO:0030154 JL D 643599 negative regulation of ectoderm cell fate
GO:0042667 GO:0030154 JL D 643599 hair cell fate specification
GO:0042668 GO:0030154 JL D 643599 hair cell fate determination
GO:0042669 GO:0030154 JL D 643599 regulation of hair cell fate
GO:0042670 GO:0030154 JL D 643599 retinal cone cell differentiation
GO:0042671 GO:0030154 JL D 643599 retinal cone cell fate determination
GO:0042672 GO:0030154 JL D 643599 retinal cone cell fate specification
GO:0042673 GO:0030154 JL D 643599 regulation of retinal cone cell fate
GO:0042674 GO:0030154 JL D 643599 cone cell differentiation (sensu Drosophila)
GO:0042675 GO:0030154 JL D 643599 cone cell differentiation
GO:0042676 GO:0030154 JL D 643599 cone cell fate commitment
GO:0042677 GO:0007275 JL D 643599 cone cell fate determination (sensu Drosophila)
GO:0030154
GO:0042678 GO:0007275 JL D 643599 cone cell fate specification (sensu Drosophila)
GO:0030154
GO:0042679 GO:0030154 JL D 643599 cone cell fate specification
GO:0042680 GO:0030154 JL D 643599 cone cell fate determination
GO:0042681 GO:0007275 JL D 643599 regulation of cone cell fate (sensu Drosophila)
GO:0030154
GO:0042682 GO:0030154 JL D 643599 regulation of cone cell fate
GO:0042683 GO:0030154 JL D 643599 negative regulation of cone cell fate
GO:0042684 GO:0030154 JL D 643599 cardioblast cell fate commitment
GO:0042685 GO:0030154 JL D 643599 cardioblast cell fate specification
GO:0042686 GO:0030154 JL D 643599 regulation of cardioblast cell fate
GO:0042688 GO:0007275 JL D 643599 crystal cell differentiation
GO:0030154
GO:0042689 GO:0007275 JL D 643599 regulation of crystal cell differentiation
GO:0030154
GO:0042690 GO:0007275 JL D 643599 negative regulation of crystal cell differentiation
GO:0030154
GO:0042691 GO:0007275 JL D 643599 positive regulation of crystal cell differentiation
GO:0030154
GO:0042692 GO:0030154 JL D muscle cell differentiation
GO:0042693 GO:0030154 JL D muscle cell fate commitment
GO:0042694 GO:0030154 JL D muscle cell fate specification
GO:0042695 GO:0007275 JL D 707740 thelarche
GO:0042696 GO:0007275 JL D 707740 menarche
GO:0007582
GO:0042697 GO:0007275 JL D 707740 menopause
GO:0007582
GO:0016265
GO:0042698 GO:0007275 JL D 707740 menstrual cycle
GO:0007582
GO:0042699 GO:0007165 JL D 707740 follicle stimulating hormone signaling pathway
GO:0007275
GO:0007582
GO:0042700 GO:0007275 JL D 707740 luteinizing hormone signaling pathway
GO:0007582
GO:0042701 GO:0007267 JL D 707740 progesterone secretion
GO:0007275
GO:0007582
GO:0042702 GO:0007275 JL D 707740 uterine wall growth
GO:0007582
GO:0042703 GO:0007275 JL D 707740 menstruation
GO:0007582
GO:0042704 GO:0007275 JL D 707740 uterine wall breakdown
GO:0007582
GO:0042705 GO:0030154 JL D non-eye photoreceptor cell differentiation
GO:0042706 GO:0030154 JL D eye photoreceptor cell fate commitment
GO:0042707 GO:0030154 JL D non-eye photoreceptor cell fate commitment
GO:0042710 GO:0007154 JL D 707740 biofilm formation
GO:0042711 GO:0007610 JL D 707740 maternal behavior
GO:0042712 GO:0007610 JL D 707740 paternal behavior
GO:0042713 GO:0007275 JL D 707740 sperm ejaculation
GO:0007610
GO:0042714 GO:0040029 JL D 707740 dosage compensation complex assembly
GO:0042715 GO:0040029 JL D 707740 dosage compensation complex assembly (sensu Nematoda)
GO:0042722 GO:0009607 JL D 671730 alpha-beta T-cell activation by superantigen
GO:0042723 GO:0008152 JL D 583399 thiamin and derivative metabolism
GO:0042724 GO:0008152 JL D 583399 thiamin and derivative biosynthesis
GO:0042725 GO:0008152 JL D 583399 thiamin and derivative catabolism
GO:0042726 GO:0008152 JL D 583399 vitamin B2 and derivative metabolism
GO:0042727 GO:0008152 JL D 583399 vitamin B2 and derivative biosynthesis
GO:0042728 GO:0008152 JL D 583399 vitamin B2 and derivative catabolism
GO:0046903 GO:0007582 AI D 702212 secretion
GO:0046907 GO:0006810 AI D intracellular transport
GO:0046908 GO:0007582 AI D 667690 negative regulation of crystal formation
GO:0046909 GO:0006810 AI D 671694 intermembrane transport
GO:0046916 GO:0019725 AI D 692950 transition metal ion homeostasis
GO:0046918 GO:0006412 AI D N-terminal peptidyl-glycine N-palmitoylation
GO:0006464
GO:0019538
GO:0048033 GO:0006731 JIC D 707429 heme o metabolism
GO:0008152
GO:0048034 GO:0006731 JIC D 707429 heme o biosynthesis
GO:0008152
GO:0009058
GO:0048035 GO:0006731 JIC D 707429 heme o catabolism
GO:0008152
GO:0009056
GO:0048036 GO:0007275 JIC D 706244 central complex development
GO:0048041 GO:0007154 JIC D 680243 focal adhesion formation
New obsoletions in process ontology
GO:0006823, heavy metal ion transport: 'heavy metal' is an ambiguous grouping term which has no set meaning (see Pure Appl. Chem. Vol. 74, No. 5, pp. 793-807, 2002, for more information).
GO:0007578, aging dependent sterility (sensu Saccharomyces): reflected a trait or phenotype.
GO:0007581, age-dependent yeast cell size increase: was not defined.
GO:0009412, response to heavy metal: 'heavy metal' is an ambiguous grouping term which has no set meaning (see Pure Appl. Chem. Vol. 74, No. 5, pp. 793-807, 2002, for more information).
GO:0015981, passive proton transport, down the electrochemical gradient: represents a passive process which occurs without the aid of gene products.
GO:0015982, antiport: represents a molecular function rather than a biological process.
GO:0015983, symport: represents a molecular function rather than a biological process.
GO:0015984, uniport: represents a molecular function rather than a biological process.
GO:0030006, heavy metal ion homeostasis: 'heavy metal' is an ambiguous grouping term which has no set meaning (see Pure Appl. Chem. Vol. 74, No. 5, pp. 793-807, 2002, for more information).
GO:0030464, aging dependent sterility (sensu Fungi): reflected a trait or phenotype.
GO:0042142, heavy metal chelation: represents a molecular function and not a biological process.
Term name changes in process ontology
GO:0000012: single-strand break repair --> single strand break repair
GO:0000720: pyrimidine-dimer repair via nucleotide-excision repair --> pyrimidine dimer repair via nucleotide excision repair
GO:0000735: removal of non-homologous ends --> removal of nonhomologous ends
GO:0000736: double-strand break repair via single-strand annealing, removal of non-homologous ends --> double-strand break repair via single-strand annealing, removal of nonhomologous ends
GO:0000913: pre-prophase band formation --> preprophase band formation
GO:0001752: eye photoreceptor commitment (sensu Drosophila) --> eye photoreceptor fate commitment (sensu Drosophila)
GO:0001754: eye photoreceptor differentiation --> eye photoreceptor cell differentiation
GO:0006290: pyrimidine-dimer repair --> pyrimidine dimer repair
GO:0006301: post-replication repair --> postreplication repair
GO:0006339: positive regulation of transcription by homeotic gene (trithorax group) --> positive regulation of transcription of homeotic gene (trithorax group)
GO:0006340: negative regulation of transcription by homeotic gene (Polycomb group) --> negative regulation of transcription of homeotic gene (Polycomb group)
GO:0006488: oligosaccharide-PP-dolichol assembly --> dolichol-linked oligosaccharide biosynthesis
GO:0006613: co-translational membrane targeting --> cotranslational membrane targeting
GO:0006614: SRP-dependent, co-translational membrane targeting --> SRP-dependent cotranslational membrane targeting
GO:0006615: SRP-dependent, co-translational membrane targeting, docking --> SRP-dependent cotranslational membrane targeting, docking
GO:0006616: SRP-dependent, co-translational membrane targeting, translocation --> SRP-dependent cotranslational membrane targeting, translocation
GO:0006617: SRP-dependent, co-translational membrane targeting, signal sequence recognition --> SRP-dependent cotranslational membrane targeting, signal sequence recognition
GO:0006618: SRP-dependent, co-translational membrane targeting, signal sequence processing --> SRP-dependent cotranslational membrane targeting, signal sequence processing
GO:0006619: SRP-independent, co-translational membrane targeting --> SRP-independent cotranslational membrane targeting
GO:0006620: post-translational membrane targeting --> posttranslational membrane targeting
GO:0006892: post Golgi transport --> post-Golgi transport
GO:0006899: non-selective vesicle transport --> nonselective vesicle transport
GO:0006900: non-selective vesicle budding --> nonselective vesicle budding
GO:0006901: non-selective vesicle coating --> nonselective vesicle coating
GO:0006902: non-selective vesicle assembly --> nonselective vesicle assembly
GO:0006903: non-selective vesicle targeting --> nonselective vesicle targeting
GO:0006904: non-selective vesicle docking --> nonselective vesicle docking
GO:0006906: non-selective vesicle fusion --> nonselective vesicle fusion
GO:0006995: response to nitrogen starvation --> cellular response to nitrogen starvation
GO:0007038: transport of endocytosed proteins to the vacuole --> endocytosed protein transport to the vacuole
GO:0007107: cytokinesis, membrane recruitment/generation --> membrane addition at site of cytokinesis
GO:0007256: activation of JUN kinase kinase --> activation of JUNKK
GO:0007257: activation of JUN kinase --> activation of JUNK
GO:0007263: NO mediated signal transduction --> nitric oxide mediated signal transduction
GO:0007278: pole cell determination --> pole cell fate determination
GO:0007294: oocyte determination --> oocyte cell fate determination
GO:0007402: determination of ganglion mother cell fate --> ganglion mother cell fate determination
GO:0007403: determination of glial fate --> glial cell fate determination
GO:0007459: photoreceptor commitment (sensu Drosophila) --> photoreceptor fate commitment (sensu Drosophila)
GO:0007521: determination of muscle identity --> muscle cell fate determination
GO:0007584: nutritional response pathway --> response to nutrients
GO:0008594: photoreceptor morphogenesis (sensu Drosophila) --> photoreceptor cell morphogenesis (sensu Drosophila)
GO:0008633: induction of proapoptotic gene products --> induction of pro-apoptotic gene products
GO:0009414: response to drought --> response to water deprivation
GO:0009908: flowering --> flower development
GO:0009909: regulation of flowering --> regulation of flower development
GO:0009910: negative regulation of flowering --> negative regulation of flower development
GO:0009911: positive regulation of flowering --> positive regulation of flower development
GO:0009970: response to sulfate starvation --> cellular response to sulfate starvation
GO:0009996: suppression of cell fate --> negative regulation of cell fate
GO:0009997: suppression of cardioblast cell fate --> negative regulation of cardioblast cell fate
GO:0009998: suppression of retinal cone cell fate --> negative regulation of retinal cone cell fate
GO:0009999: suppression of hair cell fate --> negative regulation of hair cell fate
GO:0010000: suppression of cone cell fate (sensu Drosophila) --> negative regulation of cone cell fate (sensu Drosophila)
GO:0010022: meristem determinancy --> meristem determinacy
GO:0016036: response to phosphate starvation --> cellular response to phosphate starvation
GO:0016193: non-selective vesicle endocytosis --> nonselective vesicle endocytosis
GO:0016194: non-selective vesicle exocytosis --> nonselective vesicle exocytosis
GO:0016360: determination of sensory organ precursor cell fate --> sensory organ precursor cell fate determination
GO:0016441: post-transcriptional gene silencing --> posttranscriptional gene silencing
GO:0016457: dosage compensation complex assembly --> dosage compensation complex assembly (sensu Drosophila)
GO:0016551: post-transcriptional insertion/deletion editing --> posttranscriptional insertion/deletion editing
GO:0016552: co-transcriptional insertion/deletion editing --> cotranscriptional insertion/deletion editing
GO:0019184: non-ribosomal peptide biosynthesis --> nonreciprocal peptide biosynthesis
GO:0019794: non-protein amino acid metabolism --> nonprotein amino acid metabolism
GO:0019795: non-protein amino acid biosynthesis --> nonprotein amino acid biosynthesis
GO:0019796: non-protein amino acid catabolism --> nonprotein amino acid catabolism
GO:0042149: response to glucose starvation --> cellular response to glucose starvation
GO:0042275: error-free post-replication DNA repair --> error-free postreplication DNA repair
GO:0042276: error-prone post-replication DNA repair --> error-prone postreplication DNA repair
GO:0042461: photoreceptor development --> photoreceptor cell development
GO:0042462: eye photoreceptor development --> eye photoreceptor cell development
GO:0042463: non-eye photoreceptor development --> non-eye photoreceptor cell development
GO:0045319: SRP-independent, co-translational membrane targeting, translocation --> SRP-independent cotranslational membrane targeting, translocation
GO:0045888: regulation of transcription by homeotic gene (Polycomb group) --> regulation of transcription of homeotic gene (Polycomb group)
GO:0045889: positive regulation of transcription by homeotic gene (Polycomb group) --> positive regulation of transcription of homeotic gene (Polycomb group)
GO:0045890: regulation of transcription by homeotic gene (trithorax group) --> regulation of transcription of homeotic gene (trithorax group)
GO:0045891: negative regulation of transcription by homeotic gene (trithorax group) --> negative regulation of transcription of homeotic gene (trithorax group)
GO:0046530: photoreceptor differentiation --> photoreceptor cell differentiation
GO:0046552: photoreceptor commitment --> photoreceptor cell fate commitment
GO:0046814: virion attachment, binding of host cell surface co-receptor --> virion attachment, binding of host cell surface coreceptor
New definitions for process ontology terms (56 new definitions)
GO:0001579, medium-chain fatty acid transport
GO:0006488, dolichol-linked oligosaccharide biosynthesis
GO:0006510, ATP-dependent proteolysis
GO:0006771, vitamin B2 metabolism
GO:0007158, neuronal cell adhesion
GO:0007159, leukocyte cell adhesion
GO:0007231, osmosensory signaling pathway
GO:0007232, osmosensory signaling pathway via Sho1 osmosensor
GO:0007242, intracellular signaling cascade
GO:0007243, protein kinase cascade
GO:0007254, JNK cascade
GO:0007256, activation of JUNKK
GO:0007257, activation of JUNK
GO:0007263, nitric oxide mediated signal transduction
GO:0007294, oocyte cell fate determination
GO:0007521, muscle cell fate determination
GO:0007581, age-dependent yeast cell size increase
GO:0007584, response to nutrients
GO:0007622, rhythmic behavior
GO:0007625, grooming behavior
GO:0008038, neuronal cell recognition
GO:0008341, response to cocaine (sensu Insecta)
GO:0009231, vitamin B2 biosynthesis
GO:0009232, vitamin B2 catabolism
GO:0009432, SOS response
GO:0009913, epidermal cell differentiation
GO:0010014, meristem initiation
GO:0010015, root morphogenesis
GO:0010016, shoot morphogenesis
GO:0010017, red/far red light signaling pathway
GO:0010018, far red light signaling pathway
GO:0010019, chloroplast-nucleus signaling pathway
GO:0010020, chloroplast division
GO:0010021, amylopectin biosynthesis
GO:0010022, meristem determinacy
GO:0010023, proanthocyanidin biosynthesis
GO:0010024, phytochromobilin biosynthesis
GO:0010025, wax biosynthesis
GO:0010026, trichome differentiation
GO:0010027, thylakoid membrane organization and biogenesis
GO:0010028, xanthophyll cycle
GO:0010029, regulation of seed germination
GO:0010030, positive regulation of seed germination
GO:0010031, circumnutation
GO:0010032, meiotic chromosome condensation
GO:0015981, passive proton transport, down the electrochemical gradient
GO:0015982, antiport
GO:0015983, symport
GO:0015984, uniport
GO:0016319, mushroom body development
GO:0019098, reproductive behavior
GO:0030464, aging dependent sterility (sensu Fungi)
GO:0030535, adult feeding behavior (sensu Insecta)
GO:0042461, photoreceptor cell development
GO:0042572, retinol metabolism
GO:0042573, retinoic acid metabolism
New term merges in process ontology
GO:0015831 has been merged into GO:0015031, protein transport
GO:0045166 has been merged into GO:0009306, protein secretion
GO:0045731 has been merged into GO:0009306, protein secretion
GO:0045788 has been merged into GO:0008360, regulation of cell shape
GO:0045789 has been merged into GO:0008360, regulation of cell shape
GO:0045867 has been merged into GO:0030503, regulation of redox homeostasis
GO:0045868 has been merged into GO:0030503, regulation of redox homeostasis
Term movements in process ontology:
Terms movements under GO Slim term 'lipid metabolism ; GO:0006629'
- GO:0007555, regulation of ecdysteroid secretion
- GO:0007558, regulation of juvenile hormone secretion
- GO:0045443, juvenile hormone secretion
- GO:0045457, ecdysteroid secretion
- GO:0045972, negative regulation of juvenile hormone secretion
- GO:0045973, positive regulation of juvenile hormone secretion
- GO:0045999, negative regulation of ecdysteroid secretion
- GO:0046000, positive regulation of ecdysteroid secretion
Terms movements under GO Slim term 'coenzymes and prosthetic group metabolism ; GO:0006731'
+ GO:0006768, biotin metabolism
+ GO:0009102, biotin biosynthesis
+ GO:0019351, dethiobiotin biosynthesis
+ GO:0042367, biotin catabolism
Terms movements under GO Slim term 'transport ; GO:0006810'
+ GO:0000042, protein-Golgi targeting
+ GO:0000770, peptide pheromone export
+ GO:0006605, protein targeting
+ GO:0006612, protein-membrane targeting
+ GO:0006613, cotranslational membrane targeting
+ GO:0006614, SRP-dependent cotranslational membrane targeting
+ GO:0006615, SRP-dependent cotranslational membrane targeting, docking
+ GO:0006616, SRP-dependent cotranslational membrane targeting, translocation
+ GO:0006617, SRP-dependent cotranslational membrane targeting, signal sequence recognition
+ GO:0006618, SRP-dependent cotranslational membrane targeting, signal sequence processing
+ GO:0006619, SRP-independent cotranslational membrane targeting
+ GO:0006620, posttranslational membrane targeting
+ GO:0006621, protein-ER retention
+ GO:0006622, protein-lysosome targeting
+ GO:0006623, protein-vacuolar targeting
+ GO:0006624, vacuolar protein processing/maturation
+ GO:0006625, protein-peroxisome targeting
+ GO:0006626, protein-mitochondrial targeting
+ GO:0006627, mitochondrial processing
+ GO:0006628, mitochondrial translocation
+ GO:0006835, dicarboxylic acid transport
+ GO:0006842, tricarboxylic acid transport
+ GO:0006846, acetate transport
+ GO:0006847, plasma membrane acetate transport
+ GO:0006848, pyruvate transport
+ GO:0006849, plasma membrane pyruvate transport
+ GO:0006857, oligopeptide transport
+ GO:0006886, intracellular protein transport
+ GO:0006891, intra-Golgi transport
+ GO:0015680, intracellular copper ion transport
+ GO:0015718, monocarboxylic acid transport
+ GO:0015719, allantoate transport
+ GO:0015721, bile acid transport
+ GO:0015722, canalicular bile acid transport
+ GO:0015723, bilirubin transport
+ GO:0015724, formate transport
+ GO:0015725, gluconate transport
+ GO:0015726, L-idonate transport
+ GO:0015727, lactate transport
+ GO:0015728, mevalonate transport
+ GO:0015729, oxaloacetate transport
+ GO:0015730, propionate transport
+ GO:0015731, 3-hydroxyphenyl propanoate transport
+ GO:0015732, prostaglandin transport
+ GO:0015733, shikimate transport
+ GO:0015734, taurine transport
+ GO:0015735, uronic acid transport
+ GO:0015736, hexuronate transport
+ GO:0015737, galacturonate transport
+ GO:0015738, glucuronate transport
+ GO:0015739, sialic acid transport
+ GO:0015740, C4-dicarboxylate transport
+ GO:0015741, fumarate transport
+ GO:0015742, alpha-ketoglutarate transport
+ GO:0015743, malate transport
+ GO:0015744, succinate transport
+ GO:0015745, tartrate transport
+ GO:0015746, citrate transport
+ GO:0015833, peptide transport
+ GO:0015834, peptidoglycan peptide transport
- GO:0015981, passive proton transport, down the electrochemical gradient
- GO:0015982, antiport
- GO:0015983, symport
- GO:0015984, uniport
+ GO:0016256, N-glycan processing to lysosome
+ GO:0016558, peroxisome matrix protein import
+ GO:0019060, viral intracellular protein transport
+ GO:0030150, mitochondrial matrix protein import
+ GO:0030581, host cell protein transport
+ GO:0045036, protein-chloroplast targeting
+ GO:0045037, chloroplast stroma protein import
+ GO:0045038, chloroplast thylakoid protein import
+ GO:0045039, mitochondrial inner membrane protein import
+ GO:0045040, mitochondrial outer membrane protein import
+ GO:0045041, mitochondrial intermembrane space protein import
+ GO:0045042, conservative mitochondrial IMS protein import
+ GO:0045043, non-conservative mitochondrial IMS protein import
+ GO:0045044, direct mitochondrial IMS protein import
+ GO:0045045, secretory pathway
+ GO:0045046, peroxisome membrane protein import
+ GO:0045047, protein-ER targeting
+ GO:0045048, protein-ER insertion
+ GO:0045049, ER insertion by N-terminal cleaved signal sequence
+ GO:0045050, ER insertion by stop-transfer membrane-anchor sequence
+ GO:0045051, ER insertion by internal uncleaved signal-anchor sequence
+ GO:0045052, ER insertion by GPI attachment sequence
+ GO:0045053, protein-Golgi retention
+ GO:0045054, constitutive secretory pathway
+ GO:0045055, regulated secretory pathway
+ GO:0045057, cisternal progression
+ GO:0045319, SRP-independent cotranslational membrane targeting, translocation
+ GO:0046742, nuclear viral capsid transport
+ GO:0046801, intracellular viral capsid transport
Terms movements under GO Slim term 'ion transport ; GO:0006811'
- GO:0006823, heavy metal ion transport
- GO:0015981, passive proton transport, down the electrochemical gradient
- GO:0015982, antiport
- GO:0015983, symport
- GO:0015984, uniport
Terms movements under GO Slim term 'response to stress ; GO:0006950'
- GO:0009412, response to heavy metal
- GO:0042142, heavy metal chelation
- GO:0046685, response to arsenate
- GO:0046686, response to cadmium ion
- GO:0046687, response to chromate
- GO:0046688, response to copper ion
- GO:0046689, response to mercury ion
- GO:0046690, response to tellurium ion
Terms movements under GO Slim term 'organelle organization and biogenesis ; GO:0006996'
+ GO:0006613, cotranslational membrane targeting
+ GO:0006614, SRP-dependent cotranslational membrane targeting
+ GO:0006615, SRP-dependent cotranslational membrane targeting, docking
+ GO:0006616, SRP-dependent cotranslational membrane targeting, translocation
+ GO:0006617, SRP-dependent cotranslational membrane targeting, signal sequence recognition
+ GO:0006618, SRP-dependent cotranslational membrane targeting, signal sequence processing
+ GO:0006619, SRP-independent cotranslational membrane targeting
+ GO:0006620, posttranslational membrane targeting
+ GO:0006896, Golgi to vacuole transport
+ GO:0045319, SRP-independent cotranslational membrane targeting, translocation
Terms movements under GO Slim term 'cell communication ; GO:0007154'
+ GO:0007584, response to nutrients
+ GO:0009594, perception of nutrients
Terms movements under GO Slim term 'cell-cell signaling ; GO:0007267'
+ GO:0007558, regulation of juvenile hormone secretion
+ GO:0045443, juvenile hormone secretion
+ GO:0045972, negative regulation of juvenile hormone secretion
+ GO:0045973, positive regulation of juvenile hormone secretion
Terms movements under GO Slim term 'development ; GO:0007275'
+ GO:0007468, regulation of rhodopsin gene activity
- GO:0007555, regulation of ecdysteroid secretion
- GO:0007558, regulation of juvenile hormone secretion
- GO:0007578, aging dependent sterility (sensu Saccharomyces)
- GO:0007581, age-dependent yeast cell size increase
+ GO:0009844, germination
+ GO:0009845, seed germination
+ GO:0009846, pollen germination
+ GO:0009847, spore germination
+ GO:0010022, meristem determinacy
+ GO:0010026, trichome differentiation
+ GO:0010029, regulation of seed germination
+ GO:0010030, positive regulation of seed germination
- GO:0030464, aging dependent sterility (sensu Fungi)
+ GO:0042461, photoreceptor cell development
+ GO:0042463, non-eye photoreceptor cell development
- GO:0045457, ecdysteroid secretion
+ GO:0045871, negative regulation of rhodopsin gene activity
+ GO:0045872, positive regulation of rhodopsin gene activity
- GO:0045972, negative regulation of juvenile hormone secretion
- GO:0045973, positive regulation of juvenile hormone secretion
- GO:0045999, negative regulation of ecdysteroid secretion
- GO:0046000, positive regulation of ecdysteroid secretion
- GO:0046551, retinal cone cell fate commitment
Terms movements under GO Slim term 'physiological processes ; GO:0007582'
+ GO:0001541, ovarian follicle development
+ GO:0001542, ovulation
+ GO:0001543, ovarian follicle rupture
+ GO:0001544, initiation of primordial ovarian follicle growth
+ GO:0001545, primary ovarian follicle growth
+ GO:0001546, preantral ovarian follicle growth
+ GO:0001547, antral ovarian follicle growth
+ GO:0001548, ovarian follicle antrum/follicular fluid formation
+ GO:0001549, ovarian cumulus cell differentiation
+ GO:0001550, ovarian cumulus expansion
+ GO:0001551, ovarian follicle endowment
+ GO:0001553, luteinization
+ GO:0001554, luteolysis
+ GO:0007269, neurotransmitter secretion
+ GO:0007555, regulation of ecdysteroid secretion
+ GO:0007558, regulation of juvenile hormone secretion
- GO:0007584, response to nutrients
+ GO:0008099, synaptic vesicle endocytosis
+ GO:0009306, protein secretion
- GO:0009594, perception of nutrients
+ GO:0015628, type II protein (Sec) secretion system
+ GO:0016079, synaptic vesicle exocytosis
+ GO:0016080, synaptic vesicle targeting
+ GO:0016081, synaptic vesicle docking
+ GO:0016082, synaptic vesicle priming
+ GO:0016083, synaptic vesicle fusion
+ GO:0016182, endosome to synaptic vesicle budding
+ GO:0016183, synaptic vesicle coating
+ GO:0016184, synaptic vesicle retrieval
+ GO:0016185, synaptic vesicle budding
+ GO:0016186, synaptic vesicle fission
+ GO:0016187, synaptic vesicle internalization
+ GO:0016188, synaptic vesicle maturation
+ GO:0016189, synaptic vesicle to endosome fusion
+ GO:0016191, synaptic vesicle uncoating
+ GO:0030072, peptide hormone secretion
+ GO:0030073, insulin secretion
+ GO:0030103, vasopressin secretion
+ GO:0030252, growth hormone secretion
+ GO:0030253, type I protein secretion system
+ GO:0030254, type III protein secretion system
+ GO:0030255, type IV protein secretion system
+ GO:0045443, juvenile hormone secretion
+ GO:0045457, ecdysteroid secretion
+ GO:0045592, regulation of ovarian cumulus cell differentiation
+ GO:0045593, negative regulation of ovarian cumulus cell differentiation
+ GO:0045594, positive regulation of ovarian cumulus cell differentiation
+ GO:0045972, negative regulation of juvenile hormone secretion
+ GO:0045973, positive regulation of juvenile hormone secretion
+ GO:0045999, negative regulation of ecdysteroid secretion
+ GO:0046000, positive regulation of ecdysteroid secretion
+ GO:0046676, negative regulation of insulin secretion
+ GO:0046819, type V protein secretion system
+ GO:0046879, hormone secretion
+ GO:0046880, regulation of follicle-stimulating hormone secretion
+ GO:0046881, positive regulation of follicle-stimulating hormone secretion
+ GO:0046882, negative regulation of follicle-stimulating hormone secretion
+ GO:0046883, regulation of hormone secretion
+ GO:0046884, follicle-stimulating hormone secretion
+ GO:0046887, positive regulation of hormone secretion
+ GO:0046888, negative regulation of hormone secretion
Terms movements under GO Slim term 'metabolism ; GO:0008152'
+ GO:0001519, peptide amidation
+ GO:0006518, peptide metabolism
+ GO:0006747, FAD biosynthesis
- GO:0007555, regulation of ecdysteroid secretion
- GO:0007558, regulation of juvenile hormone secretion
+ GO:0009229, thiamin diphosphate biosynthesis
+ GO:0009398, FMN biosynthesis
- GO:0030072, peptide hormone secretion
- GO:0030073, insulin secretion
- GO:0030103, vasopressin secretion
- GO:0030252, growth hormone secretion
+ GO:0042357, thiamin diphosphate metabolism
+ GO:0042358, thiamin diphosphate catabolism
+ GO:0042370, thiamin diphosphate dephosphorylation
- GO:0045443, juvenile hormone secretion
- GO:0045457, ecdysteroid secretion
- GO:0045972, negative regulation of juvenile hormone secretion
- GO:0045973, positive regulation of juvenile hormone secretion
- GO:0045999, negative regulation of ecdysteroid secretion
- GO:0046000, positive regulation of ecdysteroid secretion
+ GO:0046443, FAD metabolism
+ GO:0046444, FMN metabolism
- GO:0046676, negative regulation of insulin secretion
Terms movements under GO Slim term 'cell death ; GO:0008219'
- GO:0007578, aging dependent sterility (sensu Saccharomyces)
- GO:0007581, age-dependent yeast cell size increase
- GO:0030464, aging dependent sterility (sensu Fungi)
Terms movements under GO Slim term 'response to external stimulus ; GO:0009605'
+ GO:0007584, response to nutrients
Terms movements under GO Slim term 'response to abiotic stimulus ; GO:0009628'
+ GO:0007584, response to nutrients
- GO:0009412, response to heavy metal
- GO:0042142, heavy metal chelation
Terms movements under GO Slim term 'protein transport ; GO:0015031'
- GO:0000301, retrograde (vesicle recycling within Golgi) transport
- GO:0000770, peptide pheromone export
- GO:0006857, oligopeptide transport
- GO:0006887, exocytosis
- GO:0006888, ER to Golgi transport
- GO:0006890, retrograde (Golgi to ER) transport
- GO:0006891, intra-Golgi transport
- GO:0006892, post-Golgi transport
- GO:0006893, Golgi to plasma membrane transport
- GO:0006894, Golgi to secretory vesicle transport
- GO:0006895, Golgi to endosome transport
- GO:0006896, Golgi to vacuole transport
- GO:0006897, endocytosis
- GO:0006898, receptor mediated endocytosis
- GO:0006900, nonselective vesicle budding
- GO:0006901, nonselective vesicle coating
- GO:0006902, nonselective vesicle assembly
- GO:0006903, nonselective vesicle targeting
- GO:0006904, nonselective vesicle docking
- GO:0006906, nonselective vesicle fusion
- GO:0006907, pinocytosis
- GO:0006908, clathrin-independent pinocytosis
- GO:0006909, phagocytosis
- GO:0006910, phagocytosis, binding
- GO:0006911, phagocytosis, engulfment
- GO:0006912, phagosome formation
- GO:0008099, synaptic vesicle endocytosis
- GO:0008228, opsinization
- GO:0015833, peptide transport
- GO:0015834, peptidoglycan peptide transport
- GO:0016079, synaptic vesicle exocytosis
- GO:0016080, synaptic vesicle targeting
- GO:0016081, synaptic vesicle docking
- GO:0016082, synaptic vesicle priming
- GO:0016083, synaptic vesicle fusion
- GO:0016182, endosome to synaptic vesicle budding
- GO:0016183, synaptic vesicle coating
- GO:0016184, synaptic vesicle retrieval
- GO:0016185, synaptic vesicle budding
- GO:0016186, synaptic vesicle fission
- GO:0016187, synaptic vesicle internalization
- GO:0016188, synaptic vesicle maturation
- GO:0016189, synaptic vesicle to endosome fusion
- GO:0016191, synaptic vesicle uncoating
- GO:0016193, nonselective vesicle endocytosis
- GO:0016194, nonselective vesicle exocytosis
- GO:0017156, calcium ion dependent exocytosis
- GO:0017157, regulation of exocytosis
- GO:0017158, regulation of calcium ion dependent exocytosis
- GO:0019065, viral receptor mediated endocytosis
- GO:0030072, peptide hormone secretion
- GO:0030073, insulin secretion
- GO:0030100, regulation of endocytosis
- GO:0030103, vasopressin secretion
- GO:0030252, growth hormone secretion
- GO:0045056, transcytosis
- GO:0045057, cisternal progression
- GO:0045806, negative regulation of endocytosis
- GO:0045807, positive regulation of endocytosis
- GO:0045920, negative regulation of exocytosis
- GO:0045921, positive regulation of exocytosis
- GO:0045955, negative regulation of calcium ion dependent exocytosis
- GO:0045956, positive regulation of calcium ion dependent exocytosis
- GO:0046676, negative regulation of insulin secretion
Terms movements under GO Slim term 'cell organization and biogenesis ; GO:0016043'
+ GO:0001749, non-eye photoreceptor development (sensu Drosophila)
+ GO:0001753, adult eye photoreceptor development (sensu Drosophila)
+ GO:0007468, regulation of rhodopsin gene activity
+ GO:0008594, photoreceptor cell morphogenesis (sensu Drosophila)
+ GO:0042051, eye photoreceptor development (sensu Drosophila)
+ GO:0042052, rhabdomere development
+ GO:0042461, photoreceptor cell development
+ GO:0042462, eye photoreceptor cell development
+ GO:0042463, non-eye photoreceptor cell development
+ GO:0042478, regulation of eye photoreceptor development
+ GO:0042479, positive regulation of eye photoreceptor development
+ GO:0042480, negative regulation of eye photoreceptor development
+ GO:0045313, rhabdomere membrane biogenesis
+ GO:0045314, regulation of eye photoreceptor development (sensu Drosophila)
+ GO:0045315, positive regulation of eye photoreceptor development (sensu Drosophila)
+ GO:0045316, negative regulation of eye photoreceptor development (sensu Drosophila)
+ GO:0045463, R8 development
+ GO:0045467, R7 development
+ GO:0045468, regulation of R8 spacing
+ GO:0045469, negative regulation of R8 spacing
+ GO:0045470, R8-mediated photoreceptor organization
+ GO:0045748, positive regulation of R8 spacing
+ GO:0045871, negative regulation of rhodopsin gene activity
+ GO:0045872, positive regulation of rhodopsin gene activity
+ GO:0046548, retinal rod cell development
+ GO:0046549, retinal cone cell development
Terms movements under GO Slim term 'death ; GO:0016265'
- GO:0007578, aging dependent sterility (sensu Saccharomyces)
- GO:0007581, age-dependent yeast cell size increase
- GO:0030464, aging dependent sterility (sensu Fungi)
Terms movements under GO Slim term 'protein metabolism ; GO:0019538'
- GO:0000301, retrograde (vesicle recycling within Golgi) transport
- GO:0001519, peptide amidation
- GO:0006518, peptide metabolism
- GO:0006887, exocytosis
- GO:0006888, ER to Golgi transport
- GO:0006890, retrograde (Golgi to ER) transport
- GO:0006891, intra-Golgi transport
- GO:0006892, post-Golgi transport
- GO:0006893, Golgi to plasma membrane transport
- GO:0006894, Golgi to secretory vesicle transport
- GO:0006895, Golgi to endosome transport
- GO:0006896, Golgi to vacuole transport
- GO:0006903, nonselective vesicle targeting
- GO:0006904, nonselective vesicle docking
- GO:0006906, nonselective vesicle fusion
- GO:0009306, protein secretion
- GO:0015628, type II protein (Sec) secretion system
- GO:0016079, synaptic vesicle exocytosis
- GO:0016080, synaptic vesicle targeting
- GO:0016081, synaptic vesicle docking
- GO:0016082, synaptic vesicle priming
- GO:0016083, synaptic vesicle fusion
- GO:0016182, endosome to synaptic vesicle budding
- GO:0016194, nonselective vesicle exocytosis
- GO:0017156, calcium ion dependent exocytosis
- GO:0017157, regulation of exocytosis
- GO:0017158, regulation of calcium ion dependent exocytosis
- GO:0030253, type I protein secretion system
- GO:0030254, type III protein secretion system
- GO:0030255, type IV protein secretion system
- GO:0045045, secretory pathway
- GO:0045054, constitutive secretory pathway
- GO:0045055, regulated secretory pathway
- GO:0045057, cisternal progression
- GO:0045920, negative regulation of exocytosis
- GO:0045921, positive regulation of exocytosis
- GO:0045955, negative regulation of calcium ion dependent exocytosis
- GO:0045956, positive regulation of calcium ion dependent exocytosis
- GO:0046819, type V protein secretion system
Terms movements under GO Slim term 'cell homeostasis ; GO:0019725'
- GO:0030006, heavy metal ion homeostasis
Terms movements under GO Slim term 'cell differentiation ; GO:0030154'
+ GO:0007294, oocyte cell fate determination
- GO:0007459, photoreceptor fate commitment (sensu Drosophila)
+ GO:0007464, R3/R4 cell fate commitment
+ GO:0007521, muscle cell fate determination
- GO:0010022, meristem determinacy
SourceForge items closed this month:
SF id Resolution SF item title GO ids added, if any
536257 None ABC transporters [none]
580157 Fixed vitamin metabolism [none]
583399 Fixed vitamin metabolism II GO:0042723-42728
599425 None intron splicing [none]
604591 Accepted ATPase GO:0042623-42626
643599 Accepted regulation of cell fate GO:0042659-42691
653499 None TAIR: meristem-related terms GO:0010015-10016 GO:0010074
661071 Fixed brush border membrane [none]
661794 Fixed rearranging heavy metal terms with few additions GO:0010033-10046
663122 Accepted actomyosin GO:0042641-42643
663809 Accepted chromatophore, Rhodospirillum GO:0042716-42717
665115 Fixed starch granule [none]
665729 Accepted yolk granule from sea urchin eggs GO:0042718
667093 Accepted mast cell granule GO:0042629
667690 Works For Me crystal growth GO:0046908
667806 Works For Me Saliva secretion(GO:0046541) [none]
668401 Accepted Phage recognition [none]
671694 Works For Me Glycolipid transfer GO:0046909
671730 Accepted T-cell activation by superantigen GO:0042657-42658 GO:0042722
680213 Fixed neurotransmitter recycling [none]
680243 Fixed focal adhesion formation GO:0048041
689522 None reorganization of the 'chromosome' branch GO:0000775-00809
690767 Accepted imaginal disc morphogenesis [none]
692950 Fixed Heavy metal obsoletions - transport, transporter and binding GO:0046914-46916
692953 Accepted heme binding GO:0046906
698283 Accepted UDP-glucuronic acid decarboxylase GO:0048040
698299 Duplicate UDP-glucuronate decarboxylation [none]
698815 Fixed galacturonate binding activity GO:0048028-48032
699586 Accepted Synonyms for (GO:0016210) [none]
701706 Fixed RNAi [none]
702976 Later crystal cell differentiation [none]
703568 None children of chromosome [none]
706179 Accepted quinone binding activity GO:0048037-48039
706244 Accepted synonym: central body development GO:0048036
707429 Accepted heme o metabolism GO:0048033-48035
707540 Works For Me EC 2.7.4.10 etc GO:0046899-46902
707740 Accepted BP term suggestions from Incyte GO:0042630-42640 GO:0042695-42704 GO:0042710-42715
709045 None tair function and component terms GO:0000811
709951 Rejected plasmodium [none]
710744 Works For Me medium chain length, or how long is a fatty acid chain? [none]
710839 Fixed Follow up to regulation of mRNA splicing [none]
711285 Accepted mitochondrial inner membrane GO:0042652-42653
711454 Accepted Pectinesterase inhibitor activity GO:0046910
712762 Rejected Zinc ion transporter activity as child of Zinc ion binding [none]
713440 None New term: adenyl-nucleotide exchange factor GO:0000774
713441 None edit def of negative reg. of protein catabolism (42177) [none]
713672 Fixed ATP dependent RNA helicase activity [none]
714664 Works For Me lycopene cyclase activity [none]
714668 Accepted phytoene synthase activity GO:0046905
714892 Fixed changing nutritional response pathway term [none]
715271 None aging dependent sterility [none]
715291 Accepted chloroplast nucleoid GO:0042644-42648
716730 Fixed Heavy metal chelation GO:0046911
716735 Accepted prothylakoid GO:0042649-42650
716795 None new function term: diacylglycerol pyrophosphate phosphatase GO:0000810
717496 Fixed glycine cleavage system complex [none]
717574 Fixed Process terms for obsoletion [none]
718138 Accepted EASY: Rac GTPase activator activity GO:0030675-30676
718353 Fixed cytokinesis - GO:0007107 [none]
718356 Fixed obsolete GO:0030400? GO:0030674
719388 None phosphopantetheine transferase merge 8958 into 8897 [none]
719699 Accepted add synonym GO:0006488 oligosaccharide-PP-dolichol assembly [none]
719795 Duplicate retromer complex [none]
719815 Invalid 2.7.7.14 [none]
719816 Fixed sorry 2.7.7.14 found [none]
720605 Fixed DNA topoisomeras ...terms fro obsoletion? [none]
720612 Works For Me ATP citrate synthase GO:0046913
720716 Accepted GO:0016272 : prefoldin complex [none]
720992 Accepted ecdysis-triggering hormone receptor activity GO:0042562
721125 Invalid karine testing [none]
721338 None Plant development terms [none]
721781 Rejected GO component glycine-tRNA ligase complex (GO:0009345) [none]
723053 Fixed GO:0009364 and GO:0045254 are the same [none]
723317 Accepted triphosphoribosyl-dephospho-CoA synthase GO:0046917
725539 Accepted elastase activity GO:0042708
725633 Fixed Apoptotic program: repression of survival gene products? [none]
726122 Rejected juxtanuclear golgi region [none]
726904 None %flowering ; GO:0009908 [none]
727954 Fixed nucleocytoplasmic transport [none]
728374 Fixed translocon/ SRP [none]
728376 Accepted translocon synonym [none]
728900 Works For Me stroma of erythrocytes [none]
729595 Fixed alpha(1\,3)-fucosyltransferase synonym [none]
730096 Accepted pyruvyltransferase GO:0046919
730098 Fixed nucleoside diphosphate/ apyrase [none]
730238 Fixed GO:0006661 and GO:0046488 have the same defs [none]
Statistics:
Component: 1273 terms, 76.4% defined (973 terms defined)
Function: 5388 terms, 67.8% defined (3653 terms defined)
Process: 7179 terms, 84.2% defined (6042 terms defined)
Total: 13840 terms, 77.1% defined (10668 terms defined)
Term errors
none