GO Monthly Release Notes for April 2003
========================
Generated on Mon Oct 27 12:29:13 2003

Files used:
component	old: 2.321	new: 2.341
function 	old: 2.632	new: 2.675
process  	old: 2.713	new: 2.762
definitions	old: 2.993	new: 2.1081
GO Slim: 	Generic.0208

Key:

|----1----||----2-----||-3--||4||----5----||-----------6-----------|
GO:0009941  GO:0009536  TAIR  D  SF:575119  chloroplast envelope
               (obs)

1. GO ID number
2. GO-slim term(s) that new term was added under or "obs" if the term is obsolete.
Terms with more than one GO-slim parent have further parents listed underneath the first parent.
3. Database that added term
4. indicates the existence of a definition for the term
5. the sourceforge request ID the term was added in response to
6. term name

Columns are tab-delimited and can be imported into Excel for ease of reading.

New terms in component ontology (62 new terms)
GO:0000775	GO:0005694	SGD	D	689522	chromosome, pericentric region
GO:0000776	GO:0005694	SGD	D	689522	kinetochore
GO:0000777	GO:0005694	SGD	D	689522	condensed chromosome kinetochore
GO:0000778	GO:0000228	SGD	D	689522	condensed nuclear chromosome kinetochore
          	GO:0005694
GO:0000779	GO:0005694	SGD	D	689522	condensed chromosome, pericentric region
GO:0000780	GO:0000228	SGD	D	689522	condensed nuclear chromosome, pericentric region
          	GO:0005694
GO:0000781	GO:0005694	SGD	D	689522	chromosome, telomeric region
GO:0000782	GO:0005694	SGD	D	689522	telomere cap complex
GO:0000783	GO:0000228	SGD	D	689522	nuclear telomere cap complex
          	GO:0005694
GO:0000784	GO:0000228	SGD	D	689522	nuclear chromosome, telomeric region
          	GO:0005694
GO:0000785	GO:0005694	SGD	D	689522	chromatin
GO:0000786	GO:0005694	SGD	D	689522	nucleosome
GO:0000787	GO:0000229	SGD	D	689522	cytoplasmic nucleosome
          	GO:0005694
GO:0000788	GO:0000228	SGD	D	689522	nuclear nucleosome
          	GO:0005694
GO:0000789	GO:0000229	SGD	D	689522	cytoplasmic chromatin
          	GO:0005694
GO:0000790	GO:0000228	SGD	D	689522	nuclear chromatin
          	GO:0005694
GO:0000791	GO:0005694	SGD	D	689522	euchromatin
GO:0000792	GO:0005694	SGD	D	689522	heterochromatin
GO:0000793	GO:0005694	SGD	D	689522	condensed chromosome
GO:0000794	GO:0000228	SGD	D	689522	condensed nuclear chromosome
          	GO:0005694
GO:0000795	GO:0000228	SGD	D	689522	synaptonemal complex
          	GO:0005694
GO:0000796	GO:0005694	SGD	D	689522	condensin complex
GO:0000797	GO:0005694	SGD	D	689522	condensin core heterodimer
GO:0000798	GO:0000228	SGD	D	689522	nuclear cohesin complex
          	GO:0005694
GO:0000799	GO:0000228	SGD	D	689522	nuclear condensin complex
          	GO:0005694
GO:0000800	GO:0000228	SGD	D	689522	lateral element
          	GO:0005694
GO:0000801	GO:0000228	SGD	D	689522	central element
          	GO:0005694
GO:0000802	GO:0000228	SGD	D	689522	transverse filament
          	GO:0005694
GO:0000803	GO:0005694	SGD	D	689522	sex chromosome
GO:0000804	GO:0005694	SGD	D	689522	W chromosome
GO:0000805	GO:0005694	SGD	D	689522	X chromosome
GO:0000806	GO:0005694	SGD	D	689522	Y chromosome
GO:0000807	GO:0005694	SGD	D	689522	Z chromosome
GO:0000808	GO:0005694	SGD	D	689522	origin of replication recognition complex
GO:0000809	GO:0000229	SGD	D	689522	cytoplasmic origin of replication recognition complex
          	GO:0005694
GO:0030677	GO:0005622	MAH	D	720618	ribonuclease P complex
GO:0030678	GO:0005622	MAH	D	720618	mitochondrial ribonuclease P complex
          	GO:0005739
GO:0030679	GO:0005622	MAH	D	720618	cyanelle ribonuclease P complex
          	GO:0009536
GO:0030680	GO:0005622	MAH	D	720618	ribonuclease P complex (sensu Bacteria)
GO:0030681	GO:0005622	MAH	D	720618	ribonuclease P complex (sensu Archaea)
GO:0042627	GO:0005615	JL	D	      	chylomicron
GO:0042629	GO:0005764	JL	D	667093	mast cell granule
GO:0042641	GO:0005856	JL	D	663122	actomyosin
GO:0042642	GO:0005856	JL	D	663122	actomyosin, myosin component
GO:0042643	GO:0005856	JL	D	663122	actomyosin, actin component
GO:0042644	GO:0005622	JL	D	715291	chloroplast nucleoid
          	GO:0009536
GO:0042645	GO:0005622	JL	D	715291	mitochondrial nucleoid
          	GO:0005739
GO:0042646	GO:0005622	JL	D	715291	plastid nucleoid
          	GO:0009536
GO:0042647	GO:0005622	JL	D	715291	proplastid nucleoid
          	GO:0009536
GO:0042648	GO:0005622	JL	D	715291	chloroplast chromosome
          	GO:0005694
          	GO:0009536
GO:0042649	GO:0009536	JL	D	716735	prothylakoid
          	GO:0009579
GO:0042650	GO:0005623	JL	D	716735	prothylakoid membrane
          	GO:0009536
          	GO:0009579
GO:0042651	GO:0005623	JL	D	      	thylakoid membrane
          	GO:0009579
GO:0042652	GO:0005622	JL	D	711285	respiratory chain complex I, peripheral segment (sensu Eukarya)
          	GO:0005623
          	GO:0005739
GO:0042653	GO:0005622	JL	D	711285	respiratory chain complex I, membrane segment (sensu Eukarya)
          	GO:0005623
          	GO:0005739
GO:0042709	GO:0005737	JL	D	719772	succinate-CoA ligase complex
GO:0042716	GO:0016023	JL	D	663809	chromatophore
GO:0042717	GO:0005623	JL	D	663809	chromatophore membrane
          	GO:0016023
GO:0042718	GO:0005737	JL	D	665729	yolk granule
GO:0042719	GO:0005739	JL	D	      	mitochondrial intermembrane space protein transporter complex
GO:0042720	GO:0005623	JL	D	      	mitochondrial inner membrane peptidase complex
          	GO:0005739
GO:0042721	GO:0005623	JL	D	      	mitochondrial inner membrane protein insertion complex
          	GO:0005739


New obsoletions in component ontology
GO:0000230, nuclear mitotic chromosome: is based on a temporal division of the cell cycle.
GO:0000231, cytoplasmic mitotic chromosome: is based on a temporal division of the cell cycle.
GO:0000232, nuclear interphase chromosome: is based on a temporal division of the cell cycle.
GO:0000233, cytoplasmic interphase chromosome: is based on a temporal division of the cell cycle.
GO:0005676, condensin complex: the definition is too specific - other organisms have condensin complexes.
GO:0005695, chromatid: is not a unique subcellular component.
GO:0005696, telomere:  This term was obsoleted because the definition was too sequence oriented and too restrictive.
GO:0005698, centromere: is genetically defined region and not a specific subcellular localization.
GO:0005699, kinetochore: its definition was too specific. Kinetochores are also involved in meiosis.
GO:0005707, interphase chromosome: is based on a temporal division of the cell cycle.
GO:0005708, mitotic chromosome: is based on a process.
GO:0005709, prophase chromosome: is based on a temporal division of the cell cycle.
GO:0005710, metaphase chromosome: is based on a temporal division of the cell cycle.
GO:0005711, meiotic chromosome: is based on a process.
GO:0005716, synaptonemal complex: the definition is not true for every organism.
GO:0005717, chromatin: the definition is too specific. To update annotation, consider the cellular component term 'chromatin ; GO:0000785' and its children.
GO:0005718, nucleosome: its definition is too specific - in addition to these common histones mentioned in the definition, there are histone variants.
GO:0008621, condensin core heterodimer: the definition is too specific - other organisms have condensins as well.


Term name changes in component ontology
GO:0000172: ribonuclease mitochondrial RNA processing complex --> ribonuclease MRP complex
GO:0000274: hydrogen-transporting ATP synthase, stator stalk (sensu Eukarya) --> proton-transporting ATP synthase, stator stalk (sensu Eukarya)
GO:0000276: proton-transporting ATP synthase complex, coupling factor F(0) (sensu Eukarya) --> proton-transporting ATP synthase complex, coupling factor F(o) (sensu Eukarya)
GO:0005655: ribonuclease P complex --> nucleolar ribonuclease P complex
GO:0005664: origin recognition complex --> nuclear origin of replication recognition complex
GO:0005719: euchromatin --> nuclear euchromatin
GO:0005720: heterochromatin --> nuclear heterochromatin
GO:0005724: telomeric heterochromatin --> nuclear telomeric heterochromatin
GO:0005744: mitochondrial inner membrane translocase complex --> mitochondrial inner membrane pre-sequence translocase complex
GO:0005746: mitochondrial electron transport chain complex (sensu Eukarya) --> mitochondrial electron transport chain
GO:0005754: hydrogen-transporting ATP synthase, catalytic core (sensu Eukarya) --> proton-transporting ATP synthase, catalytic core (sensu Eukarya)
GO:0005756: hydrogen-transporting ATP synthase, central stalk (sensu Eukarya) --> proton-transporting ATP synthase, central stalk (sensu Eukarya)
GO:0005802: Golgi trans-face --> Golgi trans face
GO:0005926: connecting hemiadherens junction --> connecting hemi-adherens junction
GO:0005928: apical hemiadherens junction --> apical hemi-adherens junction
GO:0016469: hydrogen-transporting two-sector ATPase complex --> proton-transporting two-sector ATPase complex
GO:0045211: post-synaptic membrane --> postsynaptic membrane
GO:0045263: proton-transporting ATP synthase complex, coupling factor F(0) --> proton-transporting ATP synthase complex, coupling factor F(o)
GO:0045264: proton-transporting ATP synthase complex, coupling factor F(0) (sensu Bacteria) --> proton-transporting ATP synthase complex, coupling factor F(o) (sensu Bacteria)
GO:0045265: hydrogen-transporting ATP synthase, stator stalk --> proton-transporting ATP synthase, stator stalk
GO:0045266: hydrogen-transporting ATP synthase, stator stalk (sensu Bacteria) --> proton-transporting ATP synthase, stator stalk (sensu Bacteria)
GO:0045267: hydrogen-transporting ATP synthase, catalytic core --> proton-transporting ATP synthase, catalytic core
GO:0045268: hydrogen-transporting ATP synthase, catalytic core (sensu Bacteria) --> proton-transporting ATP synthase, catalytic core (sensu Bacteria)
GO:0045269: hydrogen-transporting ATP synthase, central stalk --> proton-transporting ATP synthase, central stalk
GO:0045270: hydrogen-transporting ATP synthase, central stalk (sensu Bacteria) --> proton-transporting ATP synthase, central stalk (sensu Bacteria)


New definitions for component ontology terms (19 new definitions)
GO:0005664, nuclear origin of replication recognition complex
GO:0005713, recombination nodule
GO:0005714, early recombination nodule
GO:0005715, late recombination nodule
GO:0005742, mitochondrial outer membrane translocase complex
GO:0005745, m-AAA complex
GO:0005967, pyruvate dehydrogenase complex (sensu Eukarya)
GO:0009571, proplastid stroma
GO:0009575, chromoplast stroma
GO:0009578, etioplast stroma
GO:0010005, cortical microtubule (sensu Viridiplantae)
GO:0010006, toc complex
GO:0010007, magnesium chelatase complex
GO:0010009, external side of endosome membrane
GO:0042170, plastid membrane
GO:0042575, DNA polymerase complex
GO:0045244, succinate-CoA ligase complex (GDP-forming)
GO:0045250, pyruvate dehydrogenase complex (sensu Bacteria)
GO:0045254, pyruvate dehydrogenase complex


New term merges in component ontology
GO:0005748 has been merged into GO:0005747, respiratory chain complex I (sensu Eukarya)
GO:0008136 has been merged into GO:0005749, respiratory chain complex II (sensu Eukarya)
GO:0008325 has been merged into GO:0045244, succinate-CoA ligase complex (GDP-forming)
GO:0009362 has been merged into GO:0005749, respiratory chain complex II (sensu Eukarya)
GO:0009364 has been merged into GO:0045254, pyruvate dehydrogenase complex
GO:0016470 has been merged into GO:0005753, proton-transporting ATP synthase complex (sensu Eukarya)
GO:0019738 has been merged into GO:0005749, respiratory chain complex II (sensu Eukarya)
GO:0045245 has been merged into GO:0045244, succinate-CoA ligase complex (GDP-forming)


Term movements in component ontology:
Terms movements under GO Slim term 'nuclear chromosome ; GO:0000228'
- GO:0000230, nuclear mitotic chromosome
- GO:0000232, nuclear interphase chromosome
+ GO:0001739, sex chromatin
+ GO:0001740, Barr body
+ GO:0001741, XY body
+ GO:0005664, nuclear origin of replication recognition complex
+ GO:0005712, chiasma
+ GO:0005713, recombination nodule
+ GO:0005714, early recombination nodule
+ GO:0005715, late recombination nodule
+ GO:0005719, nuclear euchromatin
+ GO:0005720, nuclear heterochromatin
+ GO:0005721, centric heterochromatin
+ GO:0005722, beta-heterochromatin
+ GO:0005723, alpha-heterochromatin
+ GO:0005724, nuclear telomeric heterochromatin
+ GO:0005725, intercalary heterochromatin
+ GO:0005726, perichromatin fibrils

Terms movements under GO Slim term 'cytoplasmic chromosome ; GO:0000229'
- GO:0000231, cytoplasmic mitotic chromosome
- GO:0000233, cytoplasmic interphase chromosome

Terms movements under GO Slim term 'intracellular ; GO:0005622'
+ GO:0000262, mitochondrial chromosome
- GO:0005947, alpha-ketoglutarate dehydrogenase complex (sensu Eukarya)
- GO:0005962, isocitrate dehydrogenase complex (NAD+) (sensu Eukarya)
+ GO:0009508, plastid chromosome
- GO:0030062, TCA cycle enzyme complex (sensu Eukarya)
- GO:0045239, TCA cycle enzyme complex
- GO:0045240, alpha-ketoglutarate dehydrogenase complex
- GO:0045241, alpha-ketoglutarate dehydrogenase complex (sensu Bacteria)
- GO:0045242, isocitrate dehydrogenase complex (NAD+)
- GO:0045243, isocitrate dehydrogenase complex (NAD+) (sensu Bacteria)
- GO:0045244, succinate-CoA ligase complex (GDP-forming)
- GO:0045246, TCA cycle enzyme complex (sensu Bacteria)

Terms movements under GO Slim term 'cell ; GO:0005623'
+ GO:0009503, light-harvesting complex (sensu Viridiplantae)
+ GO:0009517, PSII associated light-harvesting complex II
+ GO:0009518, PSI associated light-harvesting complex I
+ GO:0009535, thylakoid membrane (sensu Viridiplantae)
+ GO:0009655, PSII associated light-harvesting complex II, core complex
+ GO:0009656, PSII associated light-harvesting complex II, peripheral complex
+ GO:0030083, PSI associated light-harvesting complex I, LHCIa subcomplex
+ GO:0030084, PSI associated light-harvesting complex I, LHCIb subcomplex
+ GO:0030085, PSII associated light-harvesting complex II, peripheral complex, LHCIIb subcomplex
+ GO:0030086, PSII associated light-harvesting complex II, core complex, LHCIIa subcomplex
+ GO:0030087, PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex
+ GO:0030088, PSII associated light-harvesting complex II, core complex, LHCIId subcomplex
+ GO:0030093, photosystem I (sensu Viridiplantae)
+ GO:0030095, photosystem II (sensu Viridiplantae)

Terms movements under GO Slim term 'nucleus ; GO:0005634'
+ GO:0000333, telomerase catalytic core complex
- GO:0005676, condensin complex
+ GO:0005697, telomerase holoenzyme complex
- GO:0008278, cohesin complex
- GO:0008280, cohesin core heterodimer
- GO:0008621, condensin core heterodimer

Terms movements under GO Slim term 'chromosome ; GO:0005694'
- GO:0000230, nuclear mitotic chromosome
- GO:0000231, cytoplasmic mitotic chromosome
- GO:0000232, nuclear interphase chromosome
- GO:0000233, cytoplasmic interphase chromosome
- GO:0000333, telomerase catalytic core complex
+ GO:0005664, nuclear origin of replication recognition complex
- GO:0005676, condensin complex
- GO:0005695, chromatid
- GO:0005696, telomere
- GO:0005697, telomerase holoenzyme complex
- GO:0005698, centromere
- GO:0005699, kinetochore
- GO:0005707, interphase chromosome
- GO:0005708, mitotic chromosome
- GO:0005709, prophase chromosome
- GO:0005710, metaphase chromosome
- GO:0005711, meiotic chromosome
- GO:0005716, synaptonemal complex
- GO:0005717, chromatin
- GO:0005718, nucleosome
- GO:0008621, condensin core heterodimer

Terms movements under GO Slim term 'cytoplasm ; GO:0005737'
+ GO:0005659, delta DNA polymerase complex
+ GO:0005660, delta-DNA polymerase cofactor complex
+ GO:0005947, alpha-ketoglutarate dehydrogenase complex (sensu Eukarya)
+ GO:0005960, glycine cleavage system complex
+ GO:0005961, glycine dehydrogenase complex (decarboxylating)
+ GO:0005962, isocitrate dehydrogenase complex (NAD+) (sensu Eukarya)
+ GO:0008622, epsilon DNA polymerase complex
+ GO:0009340, DNA topoisomerase IV complex
+ GO:0009345, glycine-tRNA ligase complex
+ GO:0009355, DNA polymerase V complex
+ GO:0009360, DNA polymerase III complex
+ GO:0009361, succinate-CoA ligase complex (ADP-forming)
+ GO:0016035, zeta DNA polymerase complex
+ GO:0018444, translation release factor complex
+ GO:0030062, TCA cycle enzyme complex (sensu Eukarya)
+ GO:0042575, DNA polymerase complex
+ GO:0045239, TCA cycle enzyme complex
+ GO:0045240, alpha-ketoglutarate dehydrogenase complex
+ GO:0045242, isocitrate dehydrogenase complex (NAD+)
+ GO:0045244, succinate-CoA ligase complex (GDP-forming)

Terms movements under GO Slim term 'mitochondrion ; GO:0005739'
+ GO:0045244, succinate-CoA ligase complex (GDP-forming)

Terms movements under GO Slim term 'unlocalized ; GO:0005941'
- GO:0005659, delta DNA polymerase complex
- GO:0005660, delta-DNA polymerase cofactor complex
- GO:0005960, glycine cleavage system complex
- GO:0005961, glycine dehydrogenase complex (decarboxylating)
- GO:0008622, epsilon DNA polymerase complex
- GO:0009340, DNA topoisomerase IV complex
- GO:0009345, glycine-tRNA ligase complex
- GO:0009355, DNA polymerase V complex
- GO:0009360, DNA polymerase III complex
- GO:0009361, succinate-CoA ligase complex (ADP-forming)
- GO:0016035, zeta DNA polymerase complex
- GO:0018444, translation release factor complex
- GO:0042575, DNA polymerase complex

Terms movements under GO Slim term 'plastid ; GO:0009536'
- GO:0020023, kinetoplast



New terms in function ontology (37 new terms)
GO:0000810	GO:0003824	SGD	D	716795	diacylglycerol pyrophosphate phosphatase activity
GO:0001758	GO:0003824	MGI	D	      	retinal dehydrogenase activity
GO:0030674	GO:0005515	MAH	D	718356	protein binding activity, bridging
GO:0030675	GO:0004871	MAH	D	718138	Rac GTPase activator activity
          	GO:0030234
GO:0030676	GO:0000166	MAH	D	718138	Rac guanyl-nucleotide exchange factor activity
          	GO:0004871
GO:0042623	GO:0000166	JL	D	604591	ATPase activity, coupled
          	GO:0003824
GO:0042624	GO:0000166	JL	D	604591	ATPase activity, uncoupled
          	GO:0003824
GO:0042625	GO:0000166	JL	D	604591	ATPase activity, coupled to transmembrane movement of ions
          	GO:0003824
GO:0042626	GO:0000166	JL	D	604591	ATPase activity, coupled to transmembrane movement of substances
          	GO:0003824
GO:0042654	GO:0004872	JL	D	      	ecdysis-triggering hormone receptor activity
          	GO:0005488
GO:0042656	GO:0004672	JL	D	718402	JUN kinase kinase kinase kinase activity
          	GO:0004871
GO:0042657	GO:0005102	JL	D	671730	MHC class II protein binding activity, via lateral surface
GO:0042658	GO:0005102	JL	D	671730	MHC class II protein binding activity, via antigen binding groove
GO:0042708	GO:0008233	JL	D	725539	elastase activity
GO:0046904	GO:0005488	AI	D	      	calcium oxalate binding activity
GO:0046905	GO:0003824	AI	D	714668	phytoene synthase activity
GO:0046906	GO:0005488	AI	D	692953	tetrapyrrole binding activity
GO:0046910	GO:0030234	AI	D	711454	pectinesterase inhibitor activity
GO:0046911	GO:0005488	AI	D	716730	metal chelating activity
GO:0046912	GO:0003824	AI	D	      	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
GO:0046913	GO:0003824	AI	D	720612	ATP citrate synthase activity
GO:0046914	GO:0005488	AI	D	692950	transition metal ion binding activity
GO:0046915	GO:0005215	AI	D	692950	transition metal ion transporter activity
GO:0046917	GO:0003824	AI	D	723317	triphosphoribosyl-dephospho-CoA synthase activity
GO:0046919	GO:0003824	AI	D	730096	pyruvyltransferase
GO:0046920	GO:0003824	AI	D	      	alpha(1,3)-fucosyltransferase
GO:0046921	GO:0003824	AI	D	      	alpha(1,6)-fucosyltransferase
GO:0046922	GO:0003824	AI	D	      	peptide-O-fucosyltransferase
GO:0048028	GO:0030246	JIC	D	698815	galacturonan binding activity
GO:0048029	GO:0030246	JIC	D	698815	monosaccharide binding activity
GO:0048030	GO:0030246	JIC	D	698815	disaccharide binding activity
GO:0048031	GO:0030246	JIC	D	698815	trisaccharide binding activity
GO:0048032	GO:0030246	JIC	D	698815	galacturonate binding activity
GO:0048037	GO:0005488	JIC	D	706179	cofactor binding activity
GO:0048038	GO:0005488	JIC	D	706179	quinone binding activity
GO:0048039	GO:0005488	JIC	D	706179	ubiquinone binding activity
GO:0048040	GO:0003824	JIC	D	698283	UDP-glucuronic acid decarboxylase activity


New obsoletions in function ontology
GO:0000260, hydrogen-translocating V-type ATPase activity: represents a gene product.
GO:0000261, sodium-translocating V-type ATPase activity: represents a gene product.
GO:0004007, heavy metal-exporting ATPase activity: 'heavy metal' is an ambiguous grouping term which has no set meaning (see Pure Appl. Chem. Vol. 74, No. 5, pp. 793-807, 2002, for more information).
GO:0004717, focal adhesion kinase activity: represents a gene product, and because the gene was named after its location of action rather than after it's molecular function.
GO:0005373, heavy metal ion porter activity: represents a gene product and not a molecular function.
GO:0005505, heavy metal binding activity: 'heavy metal' is an ambiguous grouping term which has no set meaning (see Pure Appl. Chem. Vol. 74, No. 5, pp. 793-807, 2002, for more information).
GO:0008724, DNA topoisomerase IV activity: represents a gene product.
GO:0015076, heavy metal ion transporter activity: 'heavy metal' is an ambiguous grouping term which has no set meaning (see Pure Appl. Chem. Vol. 74, No. 5, pp. 793-807, 2002, for more information).
GO:0015335, heavy metal ion:hydrogen symporter activity: represents a gene product and not a molecular function.
GO:0015336, high affinity metal ion uptake transporter activity: represents a gene product and not a molecular function.
GO:0015337, low affinity metal ion uptake transporter activity: represents a gene product and not a molecular function.
GO:0015442, hydrogen-/sodium-translocating ATPase activity: is a redundant grouping term based on a TC-DB classification.
GO:0016466, hydrogen-translocating A-type ATPase activity: represents a gene product.
GO:0016467, hydrogen-translocating F-type ATPase activity: represents a gene product.
GO:0016468, sodium-translocating F-type ATPase activity: represents a gene product.
GO:0017021, myosin phosphatase myosin binding activity: describes the binding of myosin phosphatase to myosin, which is not a molecular function. To update annotation, consider the molecular function terms 'myosin binding activity ; GO:0017022' and 'myosin phosphatase ; GO:0017018'.
GO:0030400, protease substrate recruitment factor activity: represents a gene product.


Term name changes in function ontology
GO:0003917: DNA topoisomerase I activity --> DNA topoisomerase type I activity
GO:0003918: DNA topoisomerase (ATP-hydrolyzing) activity --> DNA topoisomerase type II activity
GO:0003936: hydrogen-transporting two-sector ATPase activity --> hydrogen-transporting ATPase activity
GO:0004706: JNK kinase kinase activity --> JUN kinase kinase kinase activity
GO:0004852: uroporphyringonen-III synthase activity --> uroporphyrinogen-III synthase activity
GO:0005087: RAN guanyl-nucleotide exchange factor activity --> Ran guanyl-nucleotide exchange factor activity
GO:0005088: RAS guanyl-nucleotide exchange factor activity --> Ras guanyl-nucleotide exchange factor activity
GO:0005090: SAR guanyl-nucleotide exchange factor activity --> Sar guanyl-nucleotide exchange factor activity
GO:0005097: RAB GTPase activator activity --> Rab GTPase activator activity
GO:0005098: RAN GTPase activator activity --> Ran GTPase activator activity
GO:0005099: RAS GTPase activator activity --> Ras GTPase activator activity
GO:0005101: SAR GTPase activator activity --> Sar GTPase activator activity
GO:0005285: sodium/excitatory amino acid cotransporter activity --> sodium/excitatory amino acid symporter activity
GO:0005311: sodium:dicarboxylate/tricarboxylate cotransporter activity --> sodium:dicarboxylate/tricarboxylate symporter activity
GO:0005361: trans-epithelial hydrogen:glucose transporter activity --> transepithelial hydrogen:glucose transporter activity
GO:0008027: sodium/excitatory glutamate cotransporter activity --> sodium/excitatory glutamate symporter activity
GO:0008094: DNA dependent adenosinetriphosphatase activity --> DNA dependent ATPase activity
GO:0008186: RNA dependent adenosinetriphosphatase activity --> RNA dependent ATPase activity
GO:0008321: RAL guanyl-nucleotide exchange factor activity --> Ral guanyl-nucleotide exchange factor activity
GO:0008510: sodium:bicarbonate cotransporter activity --> sodium:bicarbonate symporter activity
GO:0008965: phosphoenolpyruvate-protein phosphatase activity --> phosphoenolpyruvate-protein phosphotransferase activity
GO:0009492: Fe2S2 electron transfer carrier --> 2Fe-2S electron transfer carrier
GO:0009495: thioredoxin-like Fe2S2 ferredoxin --> thioredoxin-like 2Fe-2S ferredoxin
GO:0009497: Fe3S4/Fe4S4 electron transfer carrier --> 3Fe-4S/4Fe-4S electron transfer carrier
GO:0015249: non-selective channel activity --> nonselective channel activity
GO:0015281: non-selective cation channel activity --> nonselective cation channel activity
GO:0015361: low affinity sodium:dicarboxylate cotransporter activity --> low affinity sodium:dicarboxylate symporter activity
GO:0015362: high affinity sodium:dicarboxylate cotransporter activity --> high affinity sodium:dicarboxylate symporter activity
GO:0015377: cation:chloride cotransporter activity --> cation:chloride symporter activity
GO:0015382: sodium:sulfate cotransporter activity --> sodium:sulfate symporter activity
GO:0015443: sodium-transporting two-sector ATPase activity --> sodium-transporting ATPase activity
GO:0016501: prostacylin receptor activity --> prostacyclin receptor activity
GO:0017034: RAP guanyl-nucleotide exchange factor activity --> Rap guanyl-nucleotide exchange factor activity
GO:0017060: galactoside 3(4)-L-fucosyltransferase activity --> 3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity
GO:0017083: galactoside 3-L-fucosyltransferase activity --> 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity
GO:0017112: RAB guanyl-nucleotide exchange factor activity --> Rab guanyl-nucleotide exchange factor activity
GO:0017123: RAL GTPase activator activity --> Ral GTPase activator activity
GO:0017153: sodium:dicarboxylate cotransporter activity --> sodium:dicarboxylate symporter activity
GO:0017168: 5-oxoprolinase (ATP-hydrolysing) activity --> 5-oxoprolinase (ATP-hydrolyzing) activity
GO:0046582: RAP GTPase activator activity --> Rap GTPase activator activity


New definitions for function ontology terms (67 new definitions)
GO:0000031, mannosylphosphate transferase activity
GO:0000260, hydrogen-translocating V-type ATPase activity
GO:0000261, sodium-translocating V-type ATPase activity
GO:0003916, DNA topoisomerase activity
GO:0004705, JUN kinase activity
GO:0004706, JUN kinase kinase kinase activity
GO:0004717, focal adhesion kinase activity
GO:0004738, pyruvate dehydrogenase activity
GO:0004857, enzyme inhibitor activity
GO:0005086, ARF guanyl-nucleotide exchange factor activity
GO:0005087, Ran guanyl-nucleotide exchange factor activity
GO:0005088, Ras guanyl-nucleotide exchange factor activity
GO:0005089, Rho guanyl-nucleotide exchange factor activity
GO:0005090, Sar guanyl-nucleotide exchange factor activity
GO:0005095, GTPase inhibitor activity
GO:0005096, GTPase activator activity
GO:0005097, Rab GTPase activator activity
GO:0005098, Ran GTPase activator activity
GO:0005099, Ras GTPase activator activity
GO:0005100, Rho GTPase activator activity
GO:0005101, Sar GTPase activator activity
GO:0005476, carnitine/acyl carnitine carrier activity
GO:0005544, calcium-dependent phospholipid binding activity
GO:0008060, ARF GTPase activator activity
GO:0008321, Ral guanyl-nucleotide exchange factor activity
GO:0008410, CoA-transferase activity
GO:0008411, 4-hydroxybutyrate CoA-transferase activity
GO:0008414, CDP-alcohol phosphotransferase activity
GO:0008665, 2'-phosphotransferase activity
GO:0008828, dATP pyrophosphohydrolase activity
GO:0008913, lauroyl transferase activity
GO:0010010, lysine-ketoglutarate reductase activity
GO:0010011, auxin binding activity
GO:0010012, steroid 22-alpha hydroxylase
GO:0010013, N-1-naphthylphthalamic acid binding activity
GO:0015462, protein-transporting ATPase activity
GO:0015616, DNA translocase activity
GO:0016466, hydrogen-translocating A-type ATPase activity
GO:0016467, hydrogen-translocating F-type ATPase activity
GO:0016468, sodium-translocating F-type ATPase activity
GO:0016741, transferase activity, transferring one-carbon groups
GO:0016744, transferase activity, transferring aldehyde or ketonic groups
GO:0016746, transferase activity, transferring acyl groups
GO:0016747, transferase activity, transferring groups other than amino-acyl groups
GO:0016755, transferase activity, transferring amino-acyl groups
GO:0016757, transferase activity, transferring glycosyl groups
GO:0016758, transferase activity, transferring hexosyl groups
GO:0016763, transferase activity, transferring pentosyl groups
GO:0016764, transferase activity, transferring other glycosyl groups
GO:0016765, transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016766, transferase activity, transferring alkyl or aryl groups, other than methyl groups
GO:0016769, transferase activity, transferring nitrogenous groups
GO:0016772, transferase activity, transferring phosphorus-containing groups
GO:0016773, phosphotransferase activity, alcohol group as acceptor
GO:0016774, phosphotransferase activity, carboxyl group as acceptor
GO:0016775, phosphotransferase activity, nitrogenous group as acceptor
GO:0016776, phosphotransferase activity, phosphate group as acceptor
GO:0016779, nucleotidyltransferase activity
GO:0016782, transferase activity, transferring sulfur-containing groups
GO:0016785, transferase activity, transferring selenium-containing groups
GO:0017021, myosin phosphatase myosin binding activity
GO:0017034, Rap guanyl-nucleotide exchange factor activity
GO:0017112, Rab guanyl-nucleotide exchange factor activity
GO:0017116, single-stranded DNA dependent ATP dependent DNA helicase activity
GO:0017123, Ral GTPase activator activity
GO:0019176, dihydroneopterin monophosphate phosphatase activity
GO:0046582, Rap GTPase activator activity


New term merges in function ontology
GO:0004002 has been merged into GO:0016887, ATPase activity
GO:0008958 has been merged into GO:0008897, holo-[acyl-carrier protein] synthase activity


Term movements in function ontology:
Terms movements under GO Slim term 'nucleotide binding activity ; GO:0000166'
- GO:0000260, hydrogen-translocating V-type ATPase activity
- GO:0000261, sodium-translocating V-type ATPase activity
- GO:0004007, heavy metal-exporting ATPase activity
+ GO:0008722, DNA helicase IV activity
- GO:0015442, hydrogen-/sodium-translocating ATPase activity
- GO:0016466, hydrogen-translocating A-type ATPase activity
- GO:0016467, hydrogen-translocating F-type ATPase activity
- GO:0016468, sodium-translocating F-type ATPase activity

Terms movements under GO Slim term 'enzyme activity ; GO:0003824'
- GO:0000260, hydrogen-translocating V-type ATPase activity
- GO:0000261, sodium-translocating V-type ATPase activity
- GO:0004007, heavy metal-exporting ATPase activity
+ GO:0004741, pyruvate dehydrogenase (lipoamide) phosphatase activity
- GO:0008724, DNA topoisomerase IV activity
- GO:0015442, hydrogen-/sodium-translocating ATPase activity
- GO:0016466, hydrogen-translocating A-type ATPase activity
- GO:0016467, hydrogen-translocating F-type ATPase activity
- GO:0016468, sodium-translocating F-type ATPase activity
+ GO:0019906, pyruvate dehydrogenase (lipoamide) phosphatase, catalyst activity
+ GO:0019909, pyruvate dehydrogenase (lipoamide) phosphatase, regulator activity

Terms movements under GO Slim term 'protein kinase activity ; GO:0004672'
- GO:0004717, focal adhesion kinase activity

Terms movements under GO Slim term 'protein phosphatase activity ; GO:0004721'
- GO:0004741, pyruvate dehydrogenase (lipoamide) phosphatase activity
- GO:0008965, phosphoenolpyruvate-protein phosphotransferase activity
- GO:0017021, myosin phosphatase myosin binding activity
- GO:0019906, pyruvate dehydrogenase (lipoamide) phosphatase, catalyst activity
- GO:0019909, pyruvate dehydrogenase (lipoamide) phosphatase, regulator activity

Terms movements under GO Slim term 'signal transducer activity ; GO:0004871'
+ GO:0004710, MAP/ERK kinase kinase activity
- GO:0004717, focal adhesion kinase activity

Terms movements under GO Slim term 'transporter activity ; GO:0005215'
- GO:0000260, hydrogen-translocating V-type ATPase activity
- GO:0000261, sodium-translocating V-type ATPase activity
- GO:0004007, heavy metal-exporting ATPase activity
- GO:0005373, heavy metal ion porter activity
- GO:0015076, heavy metal ion transporter activity
- GO:0015335, heavy metal ion:hydrogen symporter activity
- GO:0015336, high affinity metal ion uptake transporter activity
- GO:0015337, low affinity metal ion uptake transporter activity
- GO:0015442, hydrogen-/sodium-translocating ATPase activity
- GO:0016466, hydrogen-translocating A-type ATPase activity
- GO:0016467, hydrogen-translocating F-type ATPase activity
- GO:0016468, sodium-translocating F-type ATPase activity

Terms movements under GO Slim term 'binding activity ; GO:0005488'
- GO:0005505, heavy metal binding activity

Terms movements under GO Slim term 'cytoskeletal protein binding activity ; GO:0008092'
- GO:0017021, myosin phosphatase myosin binding activity

Terms movements under GO Slim term 'lysin activity ; GO:0015465'
- GO:0015465, lysin activity
- GO:0015466, autolysin activity
- GO:0015470, bacteriocin activity
- GO:0015642, bacteriolytic toxin activity

Terms movements under GO Slim term 'enzyme regulator activity ; GO:0030234'
+ GO:0015465, lysin activity
+ GO:0015466, autolysin activity
+ GO:0015470, bacteriocin activity
+ GO:0015642, bacteriolytic toxin activity
- GO:0030400, protease substrate recruitment factor activity



New terms in process ontology (158 new terms)
GO:0001756	GO:0007275	MGI	D	      	somitogenesis
GO:0001757	GO:0007275	MGI	D	      	somite specification
GO:0010033	GO:0009628	TAIR	D	661794	response to organic substance
GO:0010034	GO:0009628	TAIR	D	661794	response to acetate
GO:0010035	GO:0009628	TAIR	D	661794	response to inorganic substance
GO:0010036	GO:0009628	TAIR	D	661794	response to boron
GO:0010037	GO:0009628	TAIR	D	661794	response to carbon dioxide
GO:0010038	GO:0009628	TAIR	D	661794	response to metal ion
GO:0010039	GO:0009628	TAIR	D	661794	response to iron ion
GO:0010040	GO:0009628	TAIR	D	661794	response to iron(II) ion
GO:0010041	GO:0009628	TAIR	D	661794	response to iron(III) ion
GO:0010042	GO:0009628	TAIR	D	661794	response to manganese ion
GO:0010043	GO:0009628	TAIR	D	661794	response to zinc ion
GO:0010044	GO:0009628	TAIR	D	661794	response to aluminium ion
GO:0010045	GO:0009628	TAIR	D	661794	response to nickel ion
GO:0010046	GO:0009628	TAIR	D	661794	response to mycotoxin
GO:0010047	GO:0007582	TAIR	D	      	fruit dehiscence
GO:0010048	GO:0006950	TAIR	D	      	vernalization response
          	GO:0009628
GO:0010049	GO:0007275	TAIR	D	      	acquisition of reproductive competence
GO:0010050	GO:0007275	TAIR	D	      	vegetative phase change
GO:0010051	GO:0007275	TAIR	D	      	vascular tissue pattern formation (sensu Tracheophyta)
GO:0010052	GO:0007275	TAIR	D	      	guard cell differentiation
          	GO:0030154
GO:0010053	GO:0007275	TAIR	D	      	root epidermal cell differentiation
          	GO:0030154
GO:0010054	GO:0007275	TAIR	D	      	trichoblast differentiation
          	GO:0030154
GO:0010055	GO:0007275	TAIR	D	      	atrichoblast differentiation
          	GO:0030154
GO:0010056	GO:0007275	TAIR	D	      	atrichoblast fate specification
          	GO:0030154
GO:0010057	GO:0007275	TAIR	D	      	trichoblast fate specification
          	GO:0030154
GO:0010058	GO:0007275	TAIR	D	      	regulation of atrichoblast fate
          	GO:0030154
GO:0010059	GO:0007275	TAIR	D	      	positive regulation of atrichoblast fate
          	GO:0030154
GO:0010060	GO:0007275	TAIR	D	      	negative regulation of atrichoblast fate
          	GO:0030154
GO:0010061	GO:0007275	TAIR	D	      	regulation of trichoblast fate
          	GO:0030154
GO:0010062	GO:0007275	TAIR	D	      	negative regulation of trichoblast fate
          	GO:0030154
GO:0010063	GO:0007275	TAIR	D	      	positive regulation of trichoblast fate
          	GO:0030154
GO:0010064	GO:0007275	TAIR	D	      	embryonic shoot morphogenesis
GO:0010065	GO:0007275	TAIR	D	      	primary meristem histogenesis
GO:0010066	GO:0007275	TAIR	D	      	ground meristem histogenesis
GO:0010067	GO:0007275	TAIR	D	      	procambium histogenesis
GO:0010068	GO:0007275	TAIR	D	      	protoderm histogenesis
GO:0010069	GO:0007275	TAIR	D	      	zygote asymmetric cytokinesis (sensu Magnoliophyta)
          	GO:0008283
GO:0010070	GO:0008283	TAIR	D	      	zygote asymmetric cytokinesis
GO:0010071	GO:0007275	TAIR	D	      	root meristem specification
GO:0010072	GO:0007275	TAIR	D	      	primary shoot apical meristem specification
GO:0010073	GO:0007275	TAIR	D	      	meristem maintenance
GO:0010074	GO:0007275	TAIR	D	653499	maintenance of meristem identity
GO:0010075	GO:0007275	TAIR	D	      	regulation of meristem size
GO:0010076	GO:0007275	TAIR	D	      	maintenance of floral meristem identity
GO:0010077	GO:0007275	TAIR	D	      	maintenance of inflorescence meristem identity
GO:0010078	GO:0007275	TAIR	D	      	maintenance of root meristem identity
GO:0010079	GO:0007275	TAIR	D	      	maintenance of vegetative meristem identity
GO:0010080	GO:0007275	TAIR	D	      	regulation of floral meristem size
GO:0010081	GO:0007275	TAIR	D	      	regulation of inflorescence meristem size
GO:0010082	GO:0007275	TAIR	D	      	regulation of root meristem size
GO:0010083	GO:0007275	TAIR	D	      	regulation of vegetative meristem size
GO:0010084	GO:0007275	TAIR	D	      	specification of organ axis polarity
GO:0010085	GO:0007275	TAIR	D	      	polarity specification of the proximal/distal axis
GO:0010086	GO:0007275	TAIR	D	      	embryonic root morphogenesis
GO:0010087	GO:0007275	TAIR	D	      	vascular tissue histogenesis (sensu Tracheophyta)
GO:0010088	GO:0007275	TAIR	D	      	phloem histogenesis
GO:0010089	GO:0007275	TAIR	D	      	xylem histogenesis
GO:0010090	GO:0007275	TAIR	D	      	trichome morphogenesis
          	GO:0030154
GO:0010091	GO:0007275	TAIR	D	      	trichome branching
          	GO:0030154
GO:0010092	GO:0007275	TAIR	D	      	specification of organ identity
GO:0010093	GO:0007275	TAIR	D	      	specification of floral organ identity
GO:0010094	GO:0007275	TAIR	D	      	specification of carpel identity
GO:0010095	GO:0007275	TAIR	D	      	specification of petal identity
GO:0010096	GO:0007275	TAIR	D	      	specification of sepal identity
GO:0010097	GO:0007275	TAIR	D	      	specification of stamen identity
GO:0010098	GO:0007275	TAIR	D	      	suspensor development
GO:0010099	GO:0007275	TAIR	D	      	regulation of photomorphogenesis
          	GO:0009628
GO:0010100	GO:0007275	TAIR	D	      	negative regulation of photomorphogenesis
          	GO:0009628
GO:0010101	GO:0007275	TAIR	D	      	post-embryonic root morphogenesis
GO:0010102	GO:0007275	TAIR	D	      	lateral root morphogenesis
GO:0010103	GO:0007275	TAIR	D	      	stomatal complex morphogenesis
GO:0042628	GO:0007275	JL	D	      	mating plug formation
          	GO:0007610
GO:0042630	GO:0006950	JL	D	707740	behavioral response to water deprivation
          	GO:0007610
          	GO:0009628
GO:0042631	GO:0006950	JL	D	707740	cellular response to water deprivation
          	GO:0007154
          	GO:0009605
          	GO:0009628
GO:0042632	GO:0007582	JL	D	707740	cholesterol homeostasis
GO:0042633	GO:0007582	JL	D	707740	hair cycle
GO:0042634	GO:0007582	JL	D	707740	regulation of hair cycle
GO:0042635	GO:0007582	JL	D	707740	positive regulation of hair cycle
GO:0042636	GO:0007582	JL	D	707740	negative regulation of hair cycle
GO:0042637	GO:0007582	JL	D	707740	catagen
GO:0042638	GO:0007582	JL	D	707740	exogen
GO:0042639	GO:0007582	JL	D	707740	telogen
GO:0042640	GO:0007582	JL	D	707740	anagen
GO:0042655	GO:0007165	JL	D	718402	activation of JUNKKK
GO:0042659	GO:0030154	JL	D	643599	regulation of cell fate
GO:0042660	GO:0030154	JL	D	643599	positive regulation of cell fate
GO:0042661	GO:0030154	JL	D	643599	regulation of mesoderm cell fate
GO:0042662	GO:0030154	JL	D	643599	negative regulation of mesoderm cell fate
GO:0042663	GO:0030154	JL	D	643599	regulation of endoderm cell fate
GO:0042664	GO:0030154	JL	D	643599	negative regulation of endoderm cell fate
GO:0042665	GO:0030154	JL	D	643599	regulation of ectoderm cell fate
GO:0042666	GO:0030154	JL	D	643599	negative regulation of ectoderm cell fate
GO:0042667	GO:0030154	JL	D	643599	hair cell fate specification
GO:0042668	GO:0030154	JL	D	643599	hair cell fate determination
GO:0042669	GO:0030154	JL	D	643599	regulation of hair cell fate
GO:0042670	GO:0030154	JL	D	643599	retinal cone cell differentiation
GO:0042671	GO:0030154	JL	D	643599	retinal cone cell fate determination
GO:0042672	GO:0030154	JL	D	643599	retinal cone cell fate specification
GO:0042673	GO:0030154	JL	D	643599	regulation of retinal cone cell fate
GO:0042674	GO:0030154	JL	D	643599	cone cell differentiation (sensu Drosophila)
GO:0042675	GO:0030154	JL	D	643599	cone cell differentiation
GO:0042676	GO:0030154	JL	D	643599	cone cell fate commitment
GO:0042677	GO:0007275	JL	D	643599	cone cell fate determination (sensu Drosophila)
          	GO:0030154
GO:0042678	GO:0007275	JL	D	643599	cone cell fate specification (sensu Drosophila)
          	GO:0030154
GO:0042679	GO:0030154	JL	D	643599	cone cell fate specification
GO:0042680	GO:0030154	JL	D	643599	cone cell fate determination
GO:0042681	GO:0007275	JL	D	643599	regulation of cone cell fate (sensu Drosophila)
          	GO:0030154
GO:0042682	GO:0030154	JL	D	643599	regulation of cone cell fate
GO:0042683	GO:0030154	JL	D	643599	negative regulation of cone cell fate
GO:0042684	GO:0030154	JL	D	643599	cardioblast cell fate commitment
GO:0042685	GO:0030154	JL	D	643599	cardioblast cell fate specification
GO:0042686	GO:0030154	JL	D	643599	regulation of cardioblast cell fate
GO:0042688	GO:0007275	JL	D	643599	crystal cell differentiation
          	GO:0030154
GO:0042689	GO:0007275	JL	D	643599	regulation of crystal cell differentiation
          	GO:0030154
GO:0042690	GO:0007275	JL	D	643599	negative regulation of crystal cell differentiation
          	GO:0030154
GO:0042691	GO:0007275	JL	D	643599	positive regulation of crystal cell differentiation
          	GO:0030154
GO:0042692	GO:0030154	JL	D	      	muscle cell differentiation
GO:0042693	GO:0030154	JL	D	      	muscle cell fate commitment
GO:0042694	GO:0030154	JL	D	      	muscle cell fate specification
GO:0042695	GO:0007275	JL	D	707740	thelarche
GO:0042696	GO:0007275	JL	D	707740	menarche
          	GO:0007582
GO:0042697	GO:0007275	JL	D	707740	menopause
          	GO:0007582
          	GO:0016265
GO:0042698	GO:0007275	JL	D	707740	menstrual cycle
          	GO:0007582
GO:0042699	GO:0007165	JL	D	707740	follicle stimulating hormone signaling pathway
          	GO:0007275
          	GO:0007582
GO:0042700	GO:0007275	JL	D	707740	luteinizing hormone signaling pathway
          	GO:0007582
GO:0042701	GO:0007267	JL	D	707740	progesterone secretion
          	GO:0007275
          	GO:0007582
GO:0042702	GO:0007275	JL	D	707740	uterine wall growth
          	GO:0007582
GO:0042703	GO:0007275	JL	D	707740	menstruation
          	GO:0007582
GO:0042704	GO:0007275	JL	D	707740	uterine wall breakdown
          	GO:0007582
GO:0042705	GO:0030154	JL	D	      	non-eye photoreceptor cell differentiation
GO:0042706	GO:0030154	JL	D	      	eye photoreceptor cell fate commitment
GO:0042707	GO:0030154	JL	D	      	non-eye photoreceptor cell fate commitment
GO:0042710	GO:0007154	JL	D	707740	biofilm formation
GO:0042711	GO:0007610	JL	D	707740	maternal behavior
GO:0042712	GO:0007610	JL	D	707740	paternal behavior
GO:0042713	GO:0007275	JL	D	707740	sperm ejaculation
          	GO:0007610
GO:0042714	GO:0040029	JL	D	707740	dosage compensation complex assembly
GO:0042715	GO:0040029	JL	D	707740	dosage compensation complex assembly (sensu Nematoda)
GO:0042722	GO:0009607	JL	D	671730	alpha-beta T-cell activation by superantigen
GO:0042723	GO:0008152	JL	D	583399	thiamin and derivative metabolism
GO:0042724	GO:0008152	JL	D	583399	thiamin and derivative biosynthesis
GO:0042725	GO:0008152	JL	D	583399	thiamin and derivative catabolism
GO:0042726	GO:0008152	JL	D	583399	vitamin B2 and derivative metabolism
GO:0042727	GO:0008152	JL	D	583399	vitamin B2 and derivative biosynthesis
GO:0042728	GO:0008152	JL	D	583399	vitamin B2 and derivative catabolism
GO:0046903	GO:0007582	AI	D	702212	secretion
GO:0046907	GO:0006810	AI	D	      	intracellular transport
GO:0046908	GO:0007582	AI	D	667690	negative regulation of crystal formation
GO:0046909	GO:0006810	AI	D	671694	intermembrane transport
GO:0046916	GO:0019725	AI	D	692950	transition metal ion homeostasis
GO:0046918	GO:0006412	AI	D	      	N-terminal peptidyl-glycine N-palmitoylation
          	GO:0006464
          	GO:0019538
GO:0048033	GO:0006731	JIC	D	707429	heme o metabolism
          	GO:0008152
GO:0048034	GO:0006731	JIC	D	707429	heme o biosynthesis
          	GO:0008152
          	GO:0009058
GO:0048035	GO:0006731	JIC	D	707429	heme o catabolism
          	GO:0008152
          	GO:0009056
GO:0048036	GO:0007275	JIC	D	706244	central complex development
GO:0048041	GO:0007154	JIC	D	680243	focal adhesion formation


New obsoletions in process ontology
GO:0006823, heavy metal ion transport: 'heavy metal' is an ambiguous grouping term which has no set meaning (see Pure Appl. Chem. Vol. 74, No. 5, pp. 793-807, 2002, for more information).
GO:0007578, aging dependent sterility (sensu Saccharomyces): reflected a trait or phenotype.
GO:0007581, age-dependent yeast cell size increase: was not defined.
GO:0009412, response to heavy metal: 'heavy metal' is an ambiguous grouping term which has no set meaning (see Pure Appl. Chem. Vol. 74, No. 5, pp. 793-807, 2002, for more information).
GO:0015981, passive proton transport, down the electrochemical gradient: represents a passive process which occurs without the aid of gene products.
GO:0015982, antiport: represents a molecular function rather than a biological process.
GO:0015983, symport: represents a molecular function rather than a biological process.
GO:0015984, uniport: represents a molecular function rather than a biological process.
GO:0030006, heavy metal ion homeostasis: 'heavy metal' is an ambiguous grouping term which has no set meaning (see Pure Appl. Chem. Vol. 74, No. 5, pp. 793-807, 2002, for more information).
GO:0030464, aging dependent sterility (sensu Fungi): reflected a trait or phenotype.
GO:0042142, heavy metal chelation: represents a molecular function and not a biological process.


Term name changes in process ontology
GO:0000012: single-strand break repair --> single strand break repair
GO:0000720: pyrimidine-dimer repair via nucleotide-excision repair --> pyrimidine dimer repair via nucleotide excision repair
GO:0000735: removal of non-homologous ends --> removal of nonhomologous ends
GO:0000736: double-strand break repair via single-strand annealing, removal of non-homologous ends --> double-strand break repair via single-strand annealing, removal of nonhomologous ends
GO:0000913: pre-prophase band formation --> preprophase band formation
GO:0001752: eye photoreceptor commitment (sensu Drosophila) --> eye photoreceptor fate commitment (sensu Drosophila)
GO:0001754: eye photoreceptor differentiation --> eye photoreceptor cell differentiation
GO:0006290: pyrimidine-dimer repair --> pyrimidine dimer repair
GO:0006301: post-replication repair --> postreplication repair
GO:0006339: positive regulation of transcription by homeotic gene (trithorax group) --> positive regulation of transcription of homeotic gene (trithorax group)
GO:0006340: negative regulation of transcription by homeotic gene (Polycomb group) --> negative regulation of transcription of homeotic gene (Polycomb group)
GO:0006488: oligosaccharide-PP-dolichol assembly --> dolichol-linked oligosaccharide biosynthesis
GO:0006613: co-translational membrane targeting --> cotranslational membrane targeting
GO:0006614: SRP-dependent, co-translational membrane targeting --> SRP-dependent cotranslational membrane targeting
GO:0006615: SRP-dependent, co-translational membrane targeting, docking --> SRP-dependent cotranslational membrane targeting, docking
GO:0006616: SRP-dependent, co-translational membrane targeting, translocation --> SRP-dependent cotranslational membrane targeting, translocation
GO:0006617: SRP-dependent, co-translational membrane targeting, signal sequence recognition --> SRP-dependent cotranslational membrane targeting, signal sequence recognition
GO:0006618: SRP-dependent, co-translational membrane targeting, signal sequence processing --> SRP-dependent cotranslational membrane targeting, signal sequence processing
GO:0006619: SRP-independent, co-translational membrane targeting --> SRP-independent cotranslational membrane targeting
GO:0006620: post-translational membrane targeting --> posttranslational membrane targeting
GO:0006892: post Golgi transport --> post-Golgi transport
GO:0006899: non-selective vesicle transport --> nonselective vesicle transport
GO:0006900: non-selective vesicle budding --> nonselective vesicle budding
GO:0006901: non-selective vesicle coating --> nonselective vesicle coating
GO:0006902: non-selective vesicle assembly --> nonselective vesicle assembly
GO:0006903: non-selective vesicle targeting --> nonselective vesicle targeting
GO:0006904: non-selective vesicle docking --> nonselective vesicle docking
GO:0006906: non-selective vesicle fusion --> nonselective vesicle fusion
GO:0006995: response to nitrogen starvation --> cellular response to nitrogen starvation
GO:0007038: transport of endocytosed proteins to the vacuole --> endocytosed protein transport to the vacuole
GO:0007107: cytokinesis, membrane recruitment/generation --> membrane addition at site of cytokinesis
GO:0007256: activation of JUN kinase kinase --> activation of JUNKK
GO:0007257: activation of JUN kinase --> activation of JUNK
GO:0007263: NO mediated signal transduction --> nitric oxide mediated signal transduction
GO:0007278: pole cell determination --> pole cell fate determination
GO:0007294: oocyte determination --> oocyte cell fate determination
GO:0007402: determination of ganglion mother cell fate --> ganglion mother cell fate determination
GO:0007403: determination of glial fate --> glial cell fate determination
GO:0007459: photoreceptor commitment (sensu Drosophila) --> photoreceptor fate commitment (sensu Drosophila)
GO:0007521: determination of muscle identity --> muscle cell fate determination
GO:0007584: nutritional response pathway --> response to nutrients
GO:0008594: photoreceptor morphogenesis (sensu Drosophila) --> photoreceptor cell morphogenesis (sensu Drosophila)
GO:0008633: induction of proapoptotic gene products --> induction of pro-apoptotic gene products
GO:0009414: response to drought --> response to water deprivation
GO:0009908: flowering --> flower development
GO:0009909: regulation of flowering --> regulation of flower development
GO:0009910: negative regulation of flowering --> negative regulation of flower development
GO:0009911: positive regulation of flowering --> positive regulation of flower development
GO:0009970: response to sulfate starvation --> cellular response to sulfate starvation
GO:0009996: suppression of cell fate --> negative regulation of cell fate
GO:0009997: suppression of cardioblast cell fate --> negative regulation of cardioblast cell fate
GO:0009998: suppression of retinal cone cell fate --> negative regulation of retinal cone cell fate
GO:0009999: suppression of hair cell fate --> negative regulation of hair cell fate
GO:0010000: suppression of cone cell fate (sensu Drosophila) --> negative regulation of cone cell fate (sensu Drosophila)
GO:0010022: meristem determinancy --> meristem determinacy
GO:0016036: response to phosphate starvation --> cellular response to phosphate starvation
GO:0016193: non-selective vesicle endocytosis --> nonselective vesicle endocytosis
GO:0016194: non-selective vesicle exocytosis --> nonselective vesicle exocytosis
GO:0016360: determination of sensory organ precursor cell fate --> sensory organ precursor cell fate determination
GO:0016441: post-transcriptional gene silencing --> posttranscriptional gene silencing
GO:0016457: dosage compensation complex assembly --> dosage compensation complex assembly (sensu Drosophila)
GO:0016551: post-transcriptional insertion/deletion editing --> posttranscriptional insertion/deletion editing
GO:0016552: co-transcriptional insertion/deletion editing --> cotranscriptional insertion/deletion editing
GO:0019184: non-ribosomal peptide biosynthesis --> nonreciprocal peptide biosynthesis
GO:0019794: non-protein amino acid metabolism --> nonprotein amino acid metabolism
GO:0019795: non-protein amino acid biosynthesis --> nonprotein amino acid biosynthesis
GO:0019796: non-protein amino acid catabolism --> nonprotein amino acid catabolism
GO:0042149: response to glucose starvation --> cellular response to glucose starvation
GO:0042275: error-free post-replication DNA repair --> error-free postreplication DNA repair
GO:0042276: error-prone post-replication DNA repair --> error-prone postreplication DNA repair
GO:0042461: photoreceptor development --> photoreceptor cell development
GO:0042462: eye photoreceptor development --> eye photoreceptor cell development
GO:0042463: non-eye photoreceptor development --> non-eye photoreceptor cell development
GO:0045319: SRP-independent, co-translational membrane targeting, translocation --> SRP-independent cotranslational membrane targeting, translocation
GO:0045888: regulation of transcription by homeotic gene (Polycomb group) --> regulation of transcription of homeotic gene (Polycomb group)
GO:0045889: positive regulation of transcription by homeotic gene (Polycomb group) --> positive regulation of transcription of homeotic gene (Polycomb group)
GO:0045890: regulation of transcription by homeotic gene (trithorax group) --> regulation of transcription of homeotic gene (trithorax group)
GO:0045891: negative regulation of transcription by homeotic gene (trithorax group) --> negative regulation of transcription of homeotic gene (trithorax group)
GO:0046530: photoreceptor differentiation --> photoreceptor cell differentiation
GO:0046552: photoreceptor commitment --> photoreceptor cell fate commitment
GO:0046814: virion attachment, binding of host cell surface co-receptor --> virion attachment, binding of host cell surface coreceptor


New definitions for process ontology terms (56 new definitions)
GO:0001579, medium-chain fatty acid transport
GO:0006488, dolichol-linked oligosaccharide biosynthesis
GO:0006510, ATP-dependent proteolysis
GO:0006771, vitamin B2 metabolism
GO:0007158, neuronal cell adhesion
GO:0007159, leukocyte cell adhesion
GO:0007231, osmosensory signaling pathway
GO:0007232, osmosensory signaling pathway via Sho1 osmosensor
GO:0007242, intracellular signaling cascade
GO:0007243, protein kinase cascade
GO:0007254, JNK cascade
GO:0007256, activation of JUNKK
GO:0007257, activation of JUNK
GO:0007263, nitric oxide mediated signal transduction
GO:0007294, oocyte cell fate determination
GO:0007521, muscle cell fate determination
GO:0007581, age-dependent yeast cell size increase
GO:0007584, response to nutrients
GO:0007622, rhythmic behavior
GO:0007625, grooming behavior
GO:0008038, neuronal cell recognition
GO:0008341, response to cocaine (sensu Insecta)
GO:0009231, vitamin B2 biosynthesis
GO:0009232, vitamin B2 catabolism
GO:0009432, SOS response
GO:0009913, epidermal cell differentiation
GO:0010014, meristem initiation
GO:0010015, root morphogenesis
GO:0010016, shoot morphogenesis
GO:0010017, red/far red light signaling pathway
GO:0010018, far red light signaling pathway
GO:0010019, chloroplast-nucleus signaling pathway
GO:0010020, chloroplast division
GO:0010021, amylopectin biosynthesis
GO:0010022, meristem determinacy
GO:0010023, proanthocyanidin biosynthesis
GO:0010024, phytochromobilin biosynthesis
GO:0010025, wax biosynthesis
GO:0010026, trichome differentiation
GO:0010027, thylakoid membrane organization and biogenesis
GO:0010028, xanthophyll cycle
GO:0010029, regulation of seed germination
GO:0010030, positive regulation of seed germination
GO:0010031, circumnutation
GO:0010032, meiotic chromosome condensation
GO:0015981, passive proton transport, down the electrochemical gradient
GO:0015982, antiport
GO:0015983, symport
GO:0015984, uniport
GO:0016319, mushroom body development
GO:0019098, reproductive behavior
GO:0030464, aging dependent sterility (sensu Fungi)
GO:0030535, adult feeding behavior (sensu Insecta)
GO:0042461, photoreceptor cell development
GO:0042572, retinol metabolism
GO:0042573, retinoic acid metabolism


New term merges in process ontology
GO:0015831 has been merged into GO:0015031, protein transport
GO:0045166 has been merged into GO:0009306, protein secretion
GO:0045731 has been merged into GO:0009306, protein secretion
GO:0045788 has been merged into GO:0008360, regulation of cell shape
GO:0045789 has been merged into GO:0008360, regulation of cell shape
GO:0045867 has been merged into GO:0030503, regulation of redox homeostasis
GO:0045868 has been merged into GO:0030503, regulation of redox homeostasis


Term movements in process ontology:
Terms movements under GO Slim term 'lipid metabolism ; GO:0006629'
- GO:0007555, regulation of ecdysteroid secretion
- GO:0007558, regulation of juvenile hormone secretion
- GO:0045443, juvenile hormone secretion
- GO:0045457, ecdysteroid secretion
- GO:0045972, negative regulation of juvenile hormone secretion
- GO:0045973, positive regulation of juvenile hormone secretion
- GO:0045999, negative regulation of ecdysteroid secretion
- GO:0046000, positive regulation of ecdysteroid secretion

Terms movements under GO Slim term 'coenzymes and prosthetic group metabolism ; GO:0006731'
+ GO:0006768, biotin metabolism
+ GO:0009102, biotin biosynthesis
+ GO:0019351, dethiobiotin biosynthesis
+ GO:0042367, biotin catabolism

Terms movements under GO Slim term 'transport ; GO:0006810'
+ GO:0000042, protein-Golgi targeting
+ GO:0000770, peptide pheromone export
+ GO:0006605, protein targeting
+ GO:0006612, protein-membrane targeting
+ GO:0006613, cotranslational membrane targeting
+ GO:0006614, SRP-dependent cotranslational membrane targeting
+ GO:0006615, SRP-dependent cotranslational membrane targeting, docking
+ GO:0006616, SRP-dependent cotranslational membrane targeting, translocation
+ GO:0006617, SRP-dependent cotranslational membrane targeting, signal sequence recognition
+ GO:0006618, SRP-dependent cotranslational membrane targeting, signal sequence processing
+ GO:0006619, SRP-independent cotranslational membrane targeting
+ GO:0006620, posttranslational membrane targeting
+ GO:0006621, protein-ER retention
+ GO:0006622, protein-lysosome targeting
+ GO:0006623, protein-vacuolar targeting
+ GO:0006624, vacuolar protein processing/maturation
+ GO:0006625, protein-peroxisome targeting
+ GO:0006626, protein-mitochondrial targeting
+ GO:0006627, mitochondrial processing
+ GO:0006628, mitochondrial translocation
+ GO:0006835, dicarboxylic acid transport
+ GO:0006842, tricarboxylic acid transport
+ GO:0006846, acetate transport
+ GO:0006847, plasma membrane acetate transport
+ GO:0006848, pyruvate transport
+ GO:0006849, plasma membrane pyruvate transport
+ GO:0006857, oligopeptide transport
+ GO:0006886, intracellular protein transport
+ GO:0006891, intra-Golgi transport
+ GO:0015680, intracellular copper ion transport
+ GO:0015718, monocarboxylic acid transport
+ GO:0015719, allantoate transport
+ GO:0015721, bile acid transport
+ GO:0015722, canalicular bile acid transport
+ GO:0015723, bilirubin transport
+ GO:0015724, formate transport
+ GO:0015725, gluconate transport
+ GO:0015726, L-idonate transport
+ GO:0015727, lactate transport
+ GO:0015728, mevalonate transport
+ GO:0015729, oxaloacetate transport
+ GO:0015730, propionate transport
+ GO:0015731, 3-hydroxyphenyl propanoate transport
+ GO:0015732, prostaglandin transport
+ GO:0015733, shikimate transport
+ GO:0015734, taurine transport
+ GO:0015735, uronic acid transport
+ GO:0015736, hexuronate transport
+ GO:0015737, galacturonate transport
+ GO:0015738, glucuronate transport
+ GO:0015739, sialic acid transport
+ GO:0015740, C4-dicarboxylate transport
+ GO:0015741, fumarate transport
+ GO:0015742, alpha-ketoglutarate transport
+ GO:0015743, malate transport
+ GO:0015744, succinate transport
+ GO:0015745, tartrate transport
+ GO:0015746, citrate transport
+ GO:0015833, peptide transport
+ GO:0015834, peptidoglycan peptide transport
- GO:0015981, passive proton transport, down the electrochemical gradient
- GO:0015982, antiport
- GO:0015983, symport
- GO:0015984, uniport
+ GO:0016256, N-glycan processing to lysosome
+ GO:0016558, peroxisome matrix protein import
+ GO:0019060, viral intracellular protein transport
+ GO:0030150, mitochondrial matrix protein import
+ GO:0030581, host cell protein transport
+ GO:0045036, protein-chloroplast targeting
+ GO:0045037, chloroplast stroma protein import
+ GO:0045038, chloroplast thylakoid protein import
+ GO:0045039, mitochondrial inner membrane protein import
+ GO:0045040, mitochondrial outer membrane protein import
+ GO:0045041, mitochondrial intermembrane space protein import
+ GO:0045042, conservative mitochondrial IMS protein import
+ GO:0045043, non-conservative mitochondrial IMS protein import
+ GO:0045044, direct mitochondrial IMS protein import
+ GO:0045045, secretory pathway
+ GO:0045046, peroxisome membrane protein import
+ GO:0045047, protein-ER targeting
+ GO:0045048, protein-ER insertion
+ GO:0045049, ER insertion by N-terminal cleaved signal sequence
+ GO:0045050, ER insertion by stop-transfer membrane-anchor sequence
+ GO:0045051, ER insertion by internal uncleaved signal-anchor sequence
+ GO:0045052, ER insertion by GPI attachment sequence
+ GO:0045053, protein-Golgi retention
+ GO:0045054, constitutive secretory pathway
+ GO:0045055, regulated secretory pathway
+ GO:0045057, cisternal progression
+ GO:0045319, SRP-independent cotranslational membrane targeting, translocation
+ GO:0046742, nuclear viral capsid transport
+ GO:0046801, intracellular viral capsid transport

Terms movements under GO Slim term 'ion transport ; GO:0006811'
- GO:0006823, heavy metal ion transport
- GO:0015981, passive proton transport, down the electrochemical gradient
- GO:0015982, antiport
- GO:0015983, symport
- GO:0015984, uniport

Terms movements under GO Slim term 'response to stress ; GO:0006950'
- GO:0009412, response to heavy metal
- GO:0042142, heavy metal chelation
- GO:0046685, response to arsenate
- GO:0046686, response to cadmium ion
- GO:0046687, response to chromate
- GO:0046688, response to copper ion
- GO:0046689, response to mercury ion
- GO:0046690, response to tellurium ion

Terms movements under GO Slim term 'organelle organization and biogenesis ; GO:0006996'
+ GO:0006613, cotranslational membrane targeting
+ GO:0006614, SRP-dependent cotranslational membrane targeting
+ GO:0006615, SRP-dependent cotranslational membrane targeting, docking
+ GO:0006616, SRP-dependent cotranslational membrane targeting, translocation
+ GO:0006617, SRP-dependent cotranslational membrane targeting, signal sequence recognition
+ GO:0006618, SRP-dependent cotranslational membrane targeting, signal sequence processing
+ GO:0006619, SRP-independent cotranslational membrane targeting
+ GO:0006620, posttranslational membrane targeting
+ GO:0006896, Golgi to vacuole transport
+ GO:0045319, SRP-independent cotranslational membrane targeting, translocation

Terms movements under GO Slim term 'cell communication ; GO:0007154'
+ GO:0007584, response to nutrients
+ GO:0009594, perception of nutrients

Terms movements under GO Slim term 'cell-cell signaling ; GO:0007267'
+ GO:0007558, regulation of juvenile hormone secretion
+ GO:0045443, juvenile hormone secretion
+ GO:0045972, negative regulation of juvenile hormone secretion
+ GO:0045973, positive regulation of juvenile hormone secretion

Terms movements under GO Slim term 'development ; GO:0007275'
+ GO:0007468, regulation of rhodopsin gene activity
- GO:0007555, regulation of ecdysteroid secretion
- GO:0007558, regulation of juvenile hormone secretion
- GO:0007578, aging dependent sterility (sensu Saccharomyces)
- GO:0007581, age-dependent yeast cell size increase
+ GO:0009844, germination
+ GO:0009845, seed germination
+ GO:0009846, pollen germination
+ GO:0009847, spore germination
+ GO:0010022, meristem determinacy
+ GO:0010026, trichome differentiation
+ GO:0010029, regulation of seed germination
+ GO:0010030, positive regulation of seed germination
- GO:0030464, aging dependent sterility (sensu Fungi)
+ GO:0042461, photoreceptor cell development
+ GO:0042463, non-eye photoreceptor cell development
- GO:0045457, ecdysteroid secretion
+ GO:0045871, negative regulation of rhodopsin gene activity
+ GO:0045872, positive regulation of rhodopsin gene activity
- GO:0045972, negative regulation of juvenile hormone secretion
- GO:0045973, positive regulation of juvenile hormone secretion
- GO:0045999, negative regulation of ecdysteroid secretion
- GO:0046000, positive regulation of ecdysteroid secretion
- GO:0046551, retinal cone cell fate commitment

Terms movements under GO Slim term 'physiological processes ; GO:0007582'
+ GO:0001541, ovarian follicle development
+ GO:0001542, ovulation
+ GO:0001543, ovarian follicle rupture
+ GO:0001544, initiation of primordial ovarian follicle growth
+ GO:0001545, primary ovarian follicle growth
+ GO:0001546, preantral ovarian follicle growth
+ GO:0001547, antral ovarian follicle growth
+ GO:0001548, ovarian follicle antrum/follicular fluid formation
+ GO:0001549, ovarian cumulus cell differentiation
+ GO:0001550, ovarian cumulus expansion
+ GO:0001551, ovarian follicle endowment
+ GO:0001553, luteinization
+ GO:0001554, luteolysis
+ GO:0007269, neurotransmitter secretion
+ GO:0007555, regulation of ecdysteroid secretion
+ GO:0007558, regulation of juvenile hormone secretion
- GO:0007584, response to nutrients
+ GO:0008099, synaptic vesicle endocytosis
+ GO:0009306, protein secretion
- GO:0009594, perception of nutrients
+ GO:0015628, type II protein (Sec) secretion system
+ GO:0016079, synaptic vesicle exocytosis
+ GO:0016080, synaptic vesicle targeting
+ GO:0016081, synaptic vesicle docking
+ GO:0016082, synaptic vesicle priming
+ GO:0016083, synaptic vesicle fusion
+ GO:0016182, endosome to synaptic vesicle budding
+ GO:0016183, synaptic vesicle coating
+ GO:0016184, synaptic vesicle retrieval
+ GO:0016185, synaptic vesicle budding
+ GO:0016186, synaptic vesicle fission
+ GO:0016187, synaptic vesicle internalization
+ GO:0016188, synaptic vesicle maturation
+ GO:0016189, synaptic vesicle to endosome fusion
+ GO:0016191, synaptic vesicle uncoating
+ GO:0030072, peptide hormone secretion
+ GO:0030073, insulin secretion
+ GO:0030103, vasopressin secretion
+ GO:0030252, growth hormone secretion
+ GO:0030253, type I protein secretion system
+ GO:0030254, type III protein secretion system
+ GO:0030255, type IV protein secretion system
+ GO:0045443, juvenile hormone secretion
+ GO:0045457, ecdysteroid secretion
+ GO:0045592, regulation of ovarian cumulus cell differentiation
+ GO:0045593, negative regulation of ovarian cumulus cell differentiation
+ GO:0045594, positive regulation of ovarian cumulus cell differentiation
+ GO:0045972, negative regulation of juvenile hormone secretion
+ GO:0045973, positive regulation of juvenile hormone secretion
+ GO:0045999, negative regulation of ecdysteroid secretion
+ GO:0046000, positive regulation of ecdysteroid secretion
+ GO:0046676, negative regulation of insulin secretion
+ GO:0046819, type V protein secretion system
+ GO:0046879, hormone secretion
+ GO:0046880, regulation of follicle-stimulating hormone secretion
+ GO:0046881, positive regulation of follicle-stimulating hormone secretion
+ GO:0046882, negative regulation of follicle-stimulating hormone secretion
+ GO:0046883, regulation of hormone secretion
+ GO:0046884, follicle-stimulating hormone secretion
+ GO:0046887, positive regulation of hormone secretion
+ GO:0046888, negative regulation of hormone secretion

Terms movements under GO Slim term 'metabolism ; GO:0008152'
+ GO:0001519, peptide amidation
+ GO:0006518, peptide metabolism
+ GO:0006747, FAD biosynthesis
- GO:0007555, regulation of ecdysteroid secretion
- GO:0007558, regulation of juvenile hormone secretion
+ GO:0009229, thiamin diphosphate biosynthesis
+ GO:0009398, FMN biosynthesis
- GO:0030072, peptide hormone secretion
- GO:0030073, insulin secretion
- GO:0030103, vasopressin secretion
- GO:0030252, growth hormone secretion
+ GO:0042357, thiamin diphosphate metabolism
+ GO:0042358, thiamin diphosphate catabolism
+ GO:0042370, thiamin diphosphate dephosphorylation
- GO:0045443, juvenile hormone secretion
- GO:0045457, ecdysteroid secretion
- GO:0045972, negative regulation of juvenile hormone secretion
- GO:0045973, positive regulation of juvenile hormone secretion
- GO:0045999, negative regulation of ecdysteroid secretion
- GO:0046000, positive regulation of ecdysteroid secretion
+ GO:0046443, FAD metabolism
+ GO:0046444, FMN metabolism
- GO:0046676, negative regulation of insulin secretion

Terms movements under GO Slim term 'cell death ; GO:0008219'
- GO:0007578, aging dependent sterility (sensu Saccharomyces)
- GO:0007581, age-dependent yeast cell size increase
- GO:0030464, aging dependent sterility (sensu Fungi)

Terms movements under GO Slim term 'response to external stimulus ; GO:0009605'
+ GO:0007584, response to nutrients

Terms movements under GO Slim term 'response to abiotic stimulus ; GO:0009628'
+ GO:0007584, response to nutrients
- GO:0009412, response to heavy metal
- GO:0042142, heavy metal chelation

Terms movements under GO Slim term 'protein transport ; GO:0015031'
- GO:0000301, retrograde (vesicle recycling within Golgi) transport
- GO:0000770, peptide pheromone export
- GO:0006857, oligopeptide transport
- GO:0006887, exocytosis
- GO:0006888, ER to Golgi transport
- GO:0006890, retrograde (Golgi to ER) transport
- GO:0006891, intra-Golgi transport
- GO:0006892, post-Golgi transport
- GO:0006893, Golgi to plasma membrane transport
- GO:0006894, Golgi to secretory vesicle transport
- GO:0006895, Golgi to endosome transport
- GO:0006896, Golgi to vacuole transport
- GO:0006897, endocytosis
- GO:0006898, receptor mediated endocytosis
- GO:0006900, nonselective vesicle budding
- GO:0006901, nonselective vesicle coating
- GO:0006902, nonselective vesicle assembly
- GO:0006903, nonselective vesicle targeting
- GO:0006904, nonselective vesicle docking
- GO:0006906, nonselective vesicle fusion
- GO:0006907, pinocytosis
- GO:0006908, clathrin-independent pinocytosis
- GO:0006909, phagocytosis
- GO:0006910, phagocytosis, binding
- GO:0006911, phagocytosis, engulfment
- GO:0006912, phagosome formation
- GO:0008099, synaptic vesicle endocytosis
- GO:0008228, opsinization
- GO:0015833, peptide transport
- GO:0015834, peptidoglycan peptide transport
- GO:0016079, synaptic vesicle exocytosis
- GO:0016080, synaptic vesicle targeting
- GO:0016081, synaptic vesicle docking
- GO:0016082, synaptic vesicle priming
- GO:0016083, synaptic vesicle fusion
- GO:0016182, endosome to synaptic vesicle budding
- GO:0016183, synaptic vesicle coating
- GO:0016184, synaptic vesicle retrieval
- GO:0016185, synaptic vesicle budding
- GO:0016186, synaptic vesicle fission
- GO:0016187, synaptic vesicle internalization
- GO:0016188, synaptic vesicle maturation
- GO:0016189, synaptic vesicle to endosome fusion
- GO:0016191, synaptic vesicle uncoating
- GO:0016193, nonselective vesicle endocytosis
- GO:0016194, nonselective vesicle exocytosis
- GO:0017156, calcium ion dependent exocytosis
- GO:0017157, regulation of exocytosis
- GO:0017158, regulation of calcium ion dependent exocytosis
- GO:0019065, viral receptor mediated endocytosis
- GO:0030072, peptide hormone secretion
- GO:0030073, insulin secretion
- GO:0030100, regulation of endocytosis
- GO:0030103, vasopressin secretion
- GO:0030252, growth hormone secretion
- GO:0045056, transcytosis
- GO:0045057, cisternal progression
- GO:0045806, negative regulation of endocytosis
- GO:0045807, positive regulation of endocytosis
- GO:0045920, negative regulation of exocytosis
- GO:0045921, positive regulation of exocytosis
- GO:0045955, negative regulation of calcium ion dependent exocytosis
- GO:0045956, positive regulation of calcium ion dependent exocytosis
- GO:0046676, negative regulation of insulin secretion

Terms movements under GO Slim term 'cell organization and biogenesis ; GO:0016043'
+ GO:0001749, non-eye photoreceptor development (sensu Drosophila)
+ GO:0001753, adult eye photoreceptor development (sensu Drosophila)
+ GO:0007468, regulation of rhodopsin gene activity
+ GO:0008594, photoreceptor cell morphogenesis (sensu Drosophila)
+ GO:0042051, eye photoreceptor development (sensu Drosophila)
+ GO:0042052, rhabdomere development
+ GO:0042461, photoreceptor cell development
+ GO:0042462, eye photoreceptor cell development
+ GO:0042463, non-eye photoreceptor cell development
+ GO:0042478, regulation of eye photoreceptor development
+ GO:0042479, positive regulation of eye photoreceptor development
+ GO:0042480, negative regulation of eye photoreceptor development
+ GO:0045313, rhabdomere membrane biogenesis
+ GO:0045314, regulation of eye photoreceptor development (sensu Drosophila)
+ GO:0045315, positive regulation of eye photoreceptor development (sensu Drosophila)
+ GO:0045316, negative regulation of eye photoreceptor development (sensu Drosophila)
+ GO:0045463, R8 development
+ GO:0045467, R7 development
+ GO:0045468, regulation of R8 spacing
+ GO:0045469, negative regulation of R8 spacing
+ GO:0045470, R8-mediated photoreceptor organization
+ GO:0045748, positive regulation of R8 spacing
+ GO:0045871, negative regulation of rhodopsin gene activity
+ GO:0045872, positive regulation of rhodopsin gene activity
+ GO:0046548, retinal rod cell development
+ GO:0046549, retinal cone cell development

Terms movements under GO Slim term 'death ; GO:0016265'
- GO:0007578, aging dependent sterility (sensu Saccharomyces)
- GO:0007581, age-dependent yeast cell size increase
- GO:0030464, aging dependent sterility (sensu Fungi)

Terms movements under GO Slim term 'protein metabolism ; GO:0019538'
- GO:0000301, retrograde (vesicle recycling within Golgi) transport
- GO:0001519, peptide amidation
- GO:0006518, peptide metabolism
- GO:0006887, exocytosis
- GO:0006888, ER to Golgi transport
- GO:0006890, retrograde (Golgi to ER) transport
- GO:0006891, intra-Golgi transport
- GO:0006892, post-Golgi transport
- GO:0006893, Golgi to plasma membrane transport
- GO:0006894, Golgi to secretory vesicle transport
- GO:0006895, Golgi to endosome transport
- GO:0006896, Golgi to vacuole transport
- GO:0006903, nonselective vesicle targeting
- GO:0006904, nonselective vesicle docking
- GO:0006906, nonselective vesicle fusion
- GO:0009306, protein secretion
- GO:0015628, type II protein (Sec) secretion system
- GO:0016079, synaptic vesicle exocytosis
- GO:0016080, synaptic vesicle targeting
- GO:0016081, synaptic vesicle docking
- GO:0016082, synaptic vesicle priming
- GO:0016083, synaptic vesicle fusion
- GO:0016182, endosome to synaptic vesicle budding
- GO:0016194, nonselective vesicle exocytosis
- GO:0017156, calcium ion dependent exocytosis
- GO:0017157, regulation of exocytosis
- GO:0017158, regulation of calcium ion dependent exocytosis
- GO:0030253, type I protein secretion system
- GO:0030254, type III protein secretion system
- GO:0030255, type IV protein secretion system
- GO:0045045, secretory pathway
- GO:0045054, constitutive secretory pathway
- GO:0045055, regulated secretory pathway
- GO:0045057, cisternal progression
- GO:0045920, negative regulation of exocytosis
- GO:0045921, positive regulation of exocytosis
- GO:0045955, negative regulation of calcium ion dependent exocytosis
- GO:0045956, positive regulation of calcium ion dependent exocytosis
- GO:0046819, type V protein secretion system

Terms movements under GO Slim term 'cell homeostasis ; GO:0019725'
- GO:0030006, heavy metal ion homeostasis

Terms movements under GO Slim term 'cell differentiation ; GO:0030154'
+ GO:0007294, oocyte cell fate determination
- GO:0007459, photoreceptor fate commitment (sensu Drosophila)
+ GO:0007464, R3/R4 cell fate commitment
+ GO:0007521, muscle cell fate determination
- GO:0010022, meristem determinacy



SourceForge items closed this month:

SF id	Resolution	SF item title	GO ids added, if any
536257	None	ABC transporters	[none]
580157	Fixed	vitamin metabolism	[none]
583399	Fixed	vitamin metabolism II	GO:0042723-42728
599425	None	intron splicing	[none]
604591	Accepted	ATPase	GO:0042623-42626
643599	Accepted	regulation of cell fate	GO:0042659-42691
653499	None	TAIR: meristem-related terms	GO:0010015-10016 GO:0010074
661071	Fixed	brush border membrane	[none]
661794	Fixed	rearranging heavy metal terms with few additions	GO:0010033-10046
663122	Accepted	actomyosin	GO:0042641-42643
663809	Accepted	chromatophore, Rhodospirillum	GO:0042716-42717
665115	Fixed	starch granule	[none]
665729	Accepted	yolk granule from sea urchin eggs	GO:0042718
667093	Accepted	mast cell granule	GO:0042629
667690	Works For Me	crystal growth	GO:0046908
667806	Works For Me	Saliva secretion(GO:0046541)	[none]
668401	Accepted	Phage recognition	[none]
671694	Works For Me	Glycolipid transfer	GO:0046909
671730	Accepted	T-cell activation by superantigen	GO:0042657-42658 GO:0042722
680213	Fixed	neurotransmitter recycling	[none]
680243	Fixed	focal adhesion formation	GO:0048041
689522	None	reorganization of the 'chromosome' branch	GO:0000775-00809
690767	Accepted	imaginal disc morphogenesis	[none]
692950	Fixed	Heavy metal obsoletions - transport, transporter and binding	GO:0046914-46916
692953	Accepted	heme binding	GO:0046906
698283	Accepted	UDP-glucuronic acid decarboxylase	GO:0048040
698299	Duplicate	UDP-glucuronate decarboxylation	[none]
698815	Fixed	galacturonate binding activity	GO:0048028-48032
699586	Accepted	Synonyms for (GO:0016210)	[none]
701706	Fixed	RNAi	[none]
702976	Later	crystal cell differentiation	[none]
703568	None	children of chromosome	[none]
706179	Accepted	quinone binding activity	GO:0048037-48039
706244	Accepted	synonym: central body development	GO:0048036
707429	Accepted	heme o metabolism	GO:0048033-48035
707540	Works For Me	EC 2.7.4.10 etc	GO:0046899-46902
707740	Accepted	BP term suggestions from Incyte	GO:0042630-42640 GO:0042695-42704 GO:0042710-42715
709045	None	tair function and component terms	GO:0000811
709951	Rejected	plasmodium	[none]
710744	Works For Me	medium chain length, or how long is a fatty acid chain?	[none]
710839	Fixed	Follow up to regulation of mRNA splicing	[none]
711285	Accepted	mitochondrial inner membrane	GO:0042652-42653
711454	Accepted	Pectinesterase inhibitor activity	GO:0046910
712762	Rejected	Zinc ion transporter activity as child of Zinc ion binding	[none]
713440	None	New term: adenyl-nucleotide exchange factor	GO:0000774
713441	None	edit def of negative reg. of protein catabolism (42177)	[none]
713672	Fixed	ATP dependent RNA helicase activity	[none]
714664	Works For Me	lycopene cyclase activity	[none]
714668	Accepted	phytoene synthase activity	GO:0046905
714892	Fixed	changing nutritional response pathway term	[none]
715271	None	aging dependent sterility	[none]
715291	Accepted	chloroplast nucleoid	GO:0042644-42648
716730	Fixed	Heavy metal chelation	GO:0046911
716735	Accepted	prothylakoid	GO:0042649-42650
716795	None	new function term: diacylglycerol pyrophosphate phosphatase	GO:0000810
717496	Fixed	glycine cleavage system complex	[none]
717574	Fixed	Process terms for obsoletion	[none]
718138	Accepted	EASY: Rac GTPase activator activity	GO:0030675-30676
718353	Fixed	cytokinesis - GO:0007107	[none]
718356	Fixed	obsolete GO:0030400?	GO:0030674
719388	None	phosphopantetheine transferase merge 8958 into 8897	[none]
719699	Accepted	add synonym GO:0006488 oligosaccharide-PP-dolichol assembly	[none]
719795	Duplicate	retromer complex	[none]
719815	Invalid	2.7.7.14	[none]
719816	Fixed	sorry 2.7.7.14 found	[none]
720605	Fixed	DNA topoisomeras ...terms fro obsoletion?	[none]
720612	Works For Me	ATP citrate synthase	GO:0046913
720716	Accepted	GO:0016272 : prefoldin complex	[none]
720992	Accepted	ecdysis-triggering hormone receptor activity	GO:0042562
721125	Invalid	karine testing	[none]
721338	None	Plant development terms	[none]
721781	Rejected	GO component glycine-tRNA ligase complex (GO:0009345)	[none]
723053	Fixed	GO:0009364 and GO:0045254 are the same	[none]
723317	Accepted	triphosphoribosyl-dephospho-CoA synthase	GO:0046917
725539	Accepted	elastase activity	GO:0042708
725633	Fixed	Apoptotic program: repression of survival gene products?	[none]
726122	Rejected	juxtanuclear golgi region	[none]
726904	None	   %flowering ; GO:0009908	[none]
727954	Fixed	nucleocytoplasmic transport	[none]
728374	Fixed	translocon/ SRP	[none]
728376	Accepted	translocon synonym	[none]
728900	Works For Me	stroma of erythrocytes	[none]
729595	Fixed	alpha(1\,3)-fucosyltransferase synonym	[none]
730096	Accepted	pyruvyltransferase	GO:0046919
730098	Fixed	nucleoside diphosphate/ apyrase	[none]
730238	Fixed	GO:0006661 and GO:0046488 have the same defs	[none]




Statistics:
Component: 1273 terms, 76.4% defined (973 terms defined)
Function: 5388 terms, 67.8% defined (3653 terms defined)
Process: 7179 terms, 84.2% defined (6042 terms defined)
Total: 13840 terms, 77.1% defined (10668 terms defined)


Term errors
none