54 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}} 29 BWA alignments of dorsal skin RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site dorsal skin RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "dorsal skin"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 31 Spliced-read support for dorsal skin dorsal skin intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "dorsal skin"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 30 Annotation generated from dorsal skin RNA-seq data dorsal skin RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "dorsal skin"}, "type": "rnaseq", "zmenu": "RNASeq"} 32 Spliced-read support for dorsal skin dorsal skin intron-spanning reads 1 \N 25 BWA alignments of female brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female brain RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 27 Spliced-read support for female brain female brain intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 26 Annotation generated from female brain RNA-seq data female brain RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "RNASeq"} 28 Spliced-read support for female brain female brain intron-spanning reads 1 \N 14 BWA alignments of female muscle RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female muscle RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female muscle"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 19 Spliced-read support for female muscle female muscle intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female muscle"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 18 Annotation generated from female muscle RNA-seq data female muscle RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female muscle"}, "type": "rnaseq", "zmenu": "RNASeq"} 20 Spliced-read support for female muscle female muscle intron-spanning reads 1 \N 13 BWA alignments of female ovary RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female ovary RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female ovary"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 16 Spliced-read support for female ovary female ovary intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female ovary"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 15 Annotation generated from female ovary RNA-seq data female ovary RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female ovary"}, "type": "rnaseq", "zmenu": "RNASeq"} 17 Spliced-read support for female ovary female ovary intron-spanning reads 1 \N 37 BWA alignments of female spleen RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female spleen RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female spleen"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 39 Spliced-read support for female spleen female spleen intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female spleen"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 38 Annotation generated from female spleen RNA-seq data female spleen RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female spleen"}, "type": "rnaseq", "zmenu": "RNASeq"} 40 Spliced-read support for female spleen female spleen intron-spanning reads 1 \N 33 BWA alignments of female tumor RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female tumor RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female tumor"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 35 Spliced-read support for female tumor female tumor intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female tumor"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 34 Annotation generated from female tumor RNA-seq data female tumor RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female tumor"}, "type": "rnaseq", "zmenu": "RNASeq"} 36 Spliced-read support for female tumor female tumor intron-spanning reads 1 \N 9 BWA alignments of male brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male brain RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male brain"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 11 Spliced-read support for male brain male brain intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male brain"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 10 Annotation generated from male brain RNA-seq data male brain RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male brain"}, "type": "rnaseq", "zmenu": "RNASeq"} 12 Spliced-read support for male brain male brain intron-spanning reads 1 \N 21 BWA alignments of male testis RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male testis RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male testis"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 23 Spliced-read support for male testis male testis intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male testis"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 22 Annotation generated from male testis RNA-seq data male testis RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male testis"}, "type": "rnaseq", "zmenu": "RNASeq"} 24 Spliced-read support for male testis male testis intron-spanning reads 1 \N 49 BWA alignments of merged RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site merged RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 51 Spliced-read support for merged merged intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 50 Annotation generated from merged RNA-seq data merged RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq"} 52 Spliced-read support for merged merged intron-spanning reads 1 \N 45 BWA alignments of pectoralis RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site pectoralis RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "pectoralis"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 47 Spliced-read support for pectoralis pectoralis intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "pectoralis"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 46 Annotation generated from pectoralis RNA-seq data pectoralis RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "pectoralis"}, "type": "rnaseq", "zmenu": "RNASeq"} 48 Spliced-read support for pectoralis pectoralis intron-spanning reads 1 \N 41 BWA alignments of scapulohumeralis caudalis RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site scapulohumeralis caudalis RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "scapulohumeralis caudalis"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 43 Spliced-read support for scapulohumeralis caudalis scapulohumeralis caudalis intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "scapulohumeralis caudalis"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 42 Annotation generated from scapulohumeralis caudalis RNA-seq data scapulohumeralis caudalis RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "scapulohumeralis caudalis"}, "type": "rnaseq", "zmenu": "RNASeq"} 44 Spliced-read support for scapulohumeralis caudalis scapulohumeralis caudalis intron-spanning reads 1 \N