58 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}} 49 BWA alignments of adult RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site adult RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "adult"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 51 Spliced-read support for adult adult intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "adult"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 50 Annotation generated from adult RNA-seq data adult RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "adult"}, "type": "rnaseq", "zmenu": "RNASeq"} 52 Spliced-read support for adult adult intron-spanning reads 1 \N 9 BWA alignments of female aurata gonad female sample RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female aurata gonad female sample RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female aurata gonad female sample"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 11 Spliced-read support for female aurata gonad female sample female aurata gonad female sample intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female aurata gonad female sample"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 10 Annotation generated from female aurata gonad female sample RNA-seq data female aurata gonad female sample RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female aurata gonad female sample"}, "type": "rnaseq", "zmenu": "RNASeq"} 12 Spliced-read support for female aurata gonad female sample female aurata gonad female sample intron-spanning reads 1 \N 29 BWA alignments of female brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female brain RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 31 Spliced-read support for female brain female brain intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 30 Annotation generated from female brain RNA-seq data female brain RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "RNASeq"} 32 Spliced-read support for female brain female brain intron-spanning reads 1 \N 13 BWA alignments of ff RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site ff RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "ff"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 15 Spliced-read support for ff ff intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "ff"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 14 Annotation generated from ff RNA-seq data ff RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "ff"}, "type": "rnaseq", "zmenu": "RNASeq"} 16 Spliced-read support for ff ff intron-spanning reads 1 \N 25 BWA alignments of fins RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site fins RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "fins"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 27 Spliced-read support for fins fins intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "fins"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 26 Annotation generated from fins RNA-seq data fins RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "fins"}, "type": "rnaseq", "zmenu": "RNASeq"} 28 Spliced-read support for fins fins intron-spanning reads 1 \N 33 BWA alignments of first feeding RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site first feeding RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "first feeding"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 39 Spliced-read support for first feeding first feeding intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "first feeding"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 37 Annotation generated from first feeding RNA-seq data first feeding RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "first feeding"}, "type": "rnaseq", "zmenu": "RNASeq"} 38 Spliced-read support for first feeding first feeding intron-spanning reads 1 \N 17 BWA alignments of flx RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site flx RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "flx"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 19 Spliced-read support for flx flx intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "flx"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 18 Annotation generated from flx RNA-seq data flx RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "flx"}, "type": "rnaseq", "zmenu": "RNASeq"} 20 Spliced-read support for flx flx intron-spanning reads 1 \N 36 BWA alignments of juvenile RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site juvenile RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "juvenile"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 47 Spliced-read support for juvenile juvenile intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "juvenile"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 44 Annotation generated from juvenile RNA-seq data juvenile RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "juvenile"}, "type": "rnaseq", "zmenu": "RNASeq"} 48 Spliced-read support for juvenile juvenile intron-spanning reads 1 \N 34 BWA alignments of larvae 1dph RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site larvae 1dph RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "larvae 1dph"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 40 Spliced-read support for larvae 1dph larvae 1dph intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "larvae 1dph"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 41 Annotation generated from larvae 1dph RNA-seq data larvae 1dph RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "larvae 1dph"}, "type": "rnaseq", "zmenu": "RNASeq"} 43 Spliced-read support for larvae 1dph larvae 1dph intron-spanning reads 1 \N 21 BWA alignments of male aurata gonad male sample RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male aurata gonad male sample RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male aurata gonad male sample"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 23 Spliced-read support for male aurata gonad male sample male aurata gonad male sample intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male aurata gonad male sample"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 22 Annotation generated from male aurata gonad male sample RNA-seq data male aurata gonad male sample RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male aurata gonad male sample"}, "type": "rnaseq", "zmenu": "RNASeq"} 24 Spliced-read support for male aurata gonad male sample male aurata gonad male sample intron-spanning reads 1 \N 35 BWA alignments of male brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male brain RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male brain"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 46 Spliced-read support for male brain male brain intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male brain"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 42 Annotation generated from male brain RNA-seq data male brain RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male brain"}, "type": "rnaseq", "zmenu": "RNASeq"} 45 Spliced-read support for male brain male brain intron-spanning reads 1 \N 53 BWA alignments of merged RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site merged RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 55 Spliced-read support for merged merged intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 54 Annotation generated from merged RNA-seq data merged RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq"} 56 Spliced-read support for merged merged intron-spanning reads 1 \N