74 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}} 17 BWA alignments of female bones RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female bones RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female bones"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 19 Spliced-read support for female bones female bones intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female bones"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 18 Annotation generated from female bones RNA-seq data female bones RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female bones"}, "type": "rnaseq", "zmenu": "RNASeq"} 20 Spliced-read support for female bones female bones intron-spanning reads 1 \N 50 BWA alignments of female brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female brain RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 54 Spliced-read support for female brain female brain intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 55 Annotation generated from female brain RNA-seq data female brain RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "RNASeq"} 56 Spliced-read support for female brain female brain intron-spanning reads 1 \N 22 BWA alignments of female gills RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female gills RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female gills"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 26 Spliced-read support for female gills female gills intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female gills"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 28 Annotation generated from female gills RNA-seq data female gills RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female gills"}, "type": "rnaseq", "zmenu": "RNASeq"} 27 Spliced-read support for female gills female gills intron-spanning reads 1 \N 21 BWA alignments of female head kidney RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female head kidney RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female head kidney"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 24 Spliced-read support for female head kidney female head kidney intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female head kidney"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 23 Annotation generated from female head kidney RNA-seq data female head kidney RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female head kidney"}, "type": "rnaseq", "zmenu": "RNASeq"} 25 Spliced-read support for female head kidney female head kidney intron-spanning reads 1 \N 49 BWA alignments of female heart RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female heart RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female heart"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 53 Spliced-read support for female heart female heart intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female heart"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 51 Annotation generated from female heart RNA-seq data female heart RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female heart"}, "type": "rnaseq", "zmenu": "RNASeq"} 52 Spliced-read support for female heart female heart intron-spanning reads 1 \N 37 BWA alignments of female intestine RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female intestine RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female intestine"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 39 Spliced-read support for female intestine female intestine intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female intestine"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 38 Annotation generated from female intestine RNA-seq data female intestine RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female intestine"}, "type": "rnaseq", "zmenu": "RNASeq"} 40 Spliced-read support for female intestine female intestine intron-spanning reads 1 \N 57 BWA alignments of female liver RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female liver RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female liver"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 59 Spliced-read support for female liver female liver intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female liver"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 58 Annotation generated from female liver RNA-seq data female liver RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female liver"}, "type": "rnaseq", "zmenu": "RNASeq"} 60 Spliced-read support for female liver female liver intron-spanning reads 1 \N 29 BWA alignments of female muscle RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female muscle RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female muscle"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 31 Spliced-read support for female muscle female muscle intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female muscle"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 30 Annotation generated from female muscle RNA-seq data female muscle RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female muscle"}, "type": "rnaseq", "zmenu": "RNASeq"} 32 Spliced-read support for female muscle female muscle intron-spanning reads 1 \N 10 BWA alignments of female ovary RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female ovary RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female ovary"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 14 Spliced-read support for female ovary female ovary intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female ovary"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 15 Annotation generated from female ovary RNA-seq data female ovary RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female ovary"}, "type": "rnaseq", "zmenu": "RNASeq"} 16 Spliced-read support for female ovary female ovary intron-spanning reads 1 \N 61 BWA alignments of liver RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site liver RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "liver"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 63 Spliced-read support for liver liver intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "liver"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 62 Annotation generated from liver RNA-seq data liver RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "liver"}, "type": "rnaseq", "zmenu": "RNASeq"} 64 Spliced-read support for liver liver intron-spanning reads 1 \N 45 BWA alignments of male liver RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male liver RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male liver"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 47 Spliced-read support for male liver male liver intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male liver"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 46 Annotation generated from male liver RNA-seq data male liver RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male liver"}, "type": "rnaseq", "zmenu": "RNASeq"} 48 Spliced-read support for male liver male liver intron-spanning reads 1 \N 33 BWA alignments of male testis RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male testis RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male testis"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 35 Spliced-read support for male testis male testis intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male testis"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 34 Annotation generated from male testis RNA-seq data male testis RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male testis"}, "type": "rnaseq", "zmenu": "RNASeq"} 36 Spliced-read support for male testis male testis intron-spanning reads 1 \N 69 BWA alignments of merged RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site merged RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 71 Spliced-read support for merged merged intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 70 Annotation generated from merged RNA-seq data merged RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq"} 72 Spliced-read support for merged merged intron-spanning reads 1 \N 65 BWA alignments of pooled male and female adults RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site pooled male and female adults RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "pooled male and female adults"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 67 Spliced-read support for pooled male and female adults pooled male and female adults intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "pooled male and female adults"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 66 Annotation generated from pooled male and female adults RNA-seq data pooled male and female adults RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "pooled male and female adults"}, "type": "rnaseq", "zmenu": "RNASeq"} 68 Spliced-read support for pooled male and female adults pooled male and female adults intron-spanning reads 1 \N 9 BWA alignments of pooled male and female embryos RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site pooled male and female embryos RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "pooled male and female embryos"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 13 Spliced-read support for pooled male and female embryos pooled male and female embryos intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "pooled male and female embryos"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 11 Annotation generated from pooled male and female embryos RNA-seq data pooled male and female embryos RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "pooled male and female embryos"}, "type": "rnaseq", "zmenu": "RNASeq"} 12 Spliced-read support for pooled male and female embryos pooled male and female embryos intron-spanning reads 1 \N 41 BWA alignments of skin RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site skin RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "skin"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 43 Spliced-read support for skin skin intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "skin"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 42 Annotation generated from skin RNA-seq data skin RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "skin"}, "type": "rnaseq", "zmenu": "RNASeq"} 44 Spliced-read support for skin skin intron-spanning reads 1 \N