53 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}} 9 BWA alignments of blood RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site blood RNA-seq BWA alignments 1 {"type": "rnaseq", "zmenu": "RNASeq_bam", "matrix": {"row": "blood", "group_order": "1", "column": "BAM files", "menu": "rnaseq", "group": "ENA"}, "colour_key": "bam", "label_key": "RNASeq [biotype]"} 22 Spliced-read support for blood blood intron-spanning reads 1 {"type": "rnaseq", "colour_key": "intron_support", "matrix": {"row": "blood", "column": "Intron-spanning reads", "menu": "rnaseq", "group": "ENA"}, "label_key": "", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 37 Annotation generated from blood RNA-seq data blood RNA-seq gene models 1 {"type": "rnaseq", "zmenu": "RNASeq", "matrix": {"row": "blood", "column": "Gene models", "menu": "rnaseq", "group": "ENA"}, "colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]"} 12 BWA alignments of brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site brain RNA-seq BWA alignments 1 {"type": "rnaseq", "zmenu": "RNASeq_bam", "matrix": {"row": "brain", "group_order": "1", "column": "BAM files", "menu": "rnaseq", "group": "ENA"}, "colour_key": "bam", "label_key": "RNASeq [biotype]"} 25 Spliced-read support for brain brain intron-spanning reads 1 {"type": "rnaseq", "colour_key": "intron_support", "matrix": {"row": "brain", "column": "Intron-spanning reads", "menu": "rnaseq", "group": "ENA"}, "label_key": "", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 38 Annotation generated from brain RNA-seq data brain RNA-seq gene models 1 {"type": "rnaseq", "zmenu": "RNASeq", "matrix": {"row": "brain", "column": "Gene models", "menu": "rnaseq", "group": "ENA"}, "colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]"} 13 BWA alignments of heart RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site heart RNA-seq BWA alignments 1 {"type": "rnaseq", "zmenu": "RNASeq_bam", "matrix": {"row": "heart", "group_order": "1", "column": "BAM files", "menu": "rnaseq", "group": "ENA"}, "colour_key": "bam", "label_key": "RNASeq [biotype]"} 23 Spliced-read support for heart heart intron-spanning reads 1 {"type": "rnaseq", "colour_key": "intron_support", "matrix": {"row": "heart", "column": "Intron-spanning reads", "menu": "rnaseq", "group": "ENA"}, "label_key": "", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 39 Annotation generated from heart RNA-seq data heart RNA-seq gene models 1 {"type": "rnaseq", "zmenu": "RNASeq", "matrix": {"row": "heart", "column": "Gene models", "menu": "rnaseq", "group": "ENA"}, "colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]"} 15 BWA alignments of kidney RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site kidney RNA-seq BWA alignments 1 {"type": "rnaseq", "zmenu": "RNASeq_bam", "matrix": {"row": "kidney", "group_order": "1", "column": "BAM files", "menu": "rnaseq", "group": "ENA"}, "colour_key": "bam", "label_key": "RNASeq [biotype]"} 26 Spliced-read support for kidney kidney intron-spanning reads 1 {"type": "rnaseq", "colour_key": "intron_support", "matrix": {"row": "kidney", "column": "Intron-spanning reads", "menu": "rnaseq", "group": "ENA"}, "label_key": "", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 40 Annotation generated from kidney RNA-seq data kidney RNA-seq gene models 1 {"type": "rnaseq", "zmenu": "RNASeq", "matrix": {"row": "kidney", "column": "Gene models", "menu": "rnaseq", "group": "ENA"}, "colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]"} 16 BWA alignments of liver RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site liver RNA-seq BWA alignments 1 {"type": "rnaseq", "zmenu": "RNASeq_bam", "matrix": {"row": "liver", "group_order": "1", "column": "BAM files", "menu": "rnaseq", "group": "ENA"}, "colour_key": "bam", "label_key": "RNASeq [biotype]"} 28 Spliced-read support for liver liver intron-spanning reads 1 {"type": "rnaseq", "colour_key": "intron_support", "matrix": {"row": "liver", "column": "Intron-spanning reads", "menu": "rnaseq", "group": "ENA"}, "label_key": "", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 41 Annotation generated from liver RNA-seq data liver RNA-seq gene models 1 {"type": "rnaseq", "zmenu": "RNASeq", "matrix": {"row": "liver", "column": "Gene models", "menu": "rnaseq", "group": "ENA"}, "colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]"} 17 BWA alignments of lung RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site lung RNA-seq BWA alignments 1 {"type": "rnaseq", "zmenu": "RNASeq_bam", "matrix": {"row": "lung", "group_order": "1", "column": "BAM files", "menu": "rnaseq", "group": "ENA"}, "colour_key": "bam", "label_key": "RNASeq [biotype]"} 30 Spliced-read support for lung lung intron-spanning reads 1 {"type": "rnaseq", "colour_key": "intron_support", "matrix": {"row": "lung", "column": "Intron-spanning reads", "menu": "rnaseq", "group": "ENA"}, "label_key": "", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 42 Annotation generated from lung RNA-seq data lung RNA-seq gene models 1 {"type": "rnaseq", "zmenu": "RNASeq", "matrix": {"row": "lung", "column": "Gene models", "menu": "rnaseq", "group": "ENA"}, "colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]"} 10 BWA alignments of muscle RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site muscle RNA-seq BWA alignments 1 {"type": "rnaseq", "zmenu": "RNASeq_bam", "matrix": {"row": "muscle", "group_order": "1", "column": "BAM files", "menu": "rnaseq", "group": "ENA"}, "colour_key": "bam", "label_key": "RNASeq [biotype]"} 21 Spliced-read support for muscle muscle intron-spanning reads 1 {"type": "rnaseq", "colour_key": "intron_support", "matrix": {"row": "muscle", "column": "Intron-spanning reads", "menu": "rnaseq", "group": "ENA"}, "label_key": "", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 44 Annotation generated from muscle RNA-seq data muscle RNA-seq gene models 1 {"type": "rnaseq", "zmenu": "RNASeq", "matrix": {"row": "muscle", "column": "Gene models", "menu": "rnaseq", "group": "ENA"}, "colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]"} 35 BWA alignments of olfactory epithelium RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site olfactory epithelium RNA-seq BWA alignments 1 {"type": "rnaseq", "zmenu": "RNASeq_bam", "matrix": {"row": "olfactory epithelium", "group_order": "1", "column": "BAM files", "menu": "rnaseq", "group": "ENA"}, "colour_key": "bam", "label_key": "RNASeq [biotype]"} 36 Spliced-read support for olfactory epithelium olfactory epithelium intron-spanning reads 1 {"type": "rnaseq", "colour_key": "intron_support", "matrix": {"row": "olfactory epithelium", "column": "Intron-spanning reads", "menu": "rnaseq", "group": "ENA"}, "label_key": "", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 45 Annotation generated from olfactory epithelium RNA-seq data olfactory epithelium RNA-seq gene models 1 {"type": "rnaseq", "zmenu": "RNASeq", "matrix": {"row": "olfactory epithelium", "column": "Gene models", "menu": "rnaseq", "group": "ENA"}, "colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]"} 11 BWA alignments of ovary RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site ovary RNA-seq BWA alignments 1 {"type": "rnaseq", "zmenu": "RNASeq_bam", "matrix": {"row": "ovary", "group_order": "1", "column": "BAM files", "menu": "rnaseq", "group": "ENA"}, "colour_key": "bam", "label_key": "RNASeq [biotype]"} 24 Spliced-read support for ovary ovary intron-spanning reads 1 {"type": "rnaseq", "colour_key": "intron_support", "matrix": {"row": "ovary", "column": "Intron-spanning reads", "menu": "rnaseq", "group": "ENA"}, "label_key": "", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 49 Annotation generated from ovary RNA-seq data ovary RNA-seq gene models 1 {"type": "rnaseq", "zmenu": "RNASeq", "matrix": {"row": "ovary", "column": "Gene models", "menu": "rnaseq", "group": "ENA"}, "colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]"} 19 BWA alignments of skin RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site skin RNA-seq BWA alignments 1 {"type": "rnaseq", "zmenu": "RNASeq_bam", "matrix": {"row": "skin", "group_order": "1", "column": "BAM files", "menu": "rnaseq", "group": "ENA"}, "colour_key": "bam", "label_key": "RNASeq [biotype]"} 31 Spliced-read support for skin skin intron-spanning reads 1 {"type": "rnaseq", "colour_key": "intron_support", "matrix": {"row": "skin", "column": "Intron-spanning reads", "menu": "rnaseq", "group": "ENA"}, "label_key": "", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 46 Annotation generated from skin RNA-seq data skin RNA-seq gene models 1 {"type": "rnaseq", "zmenu": "RNASeq", "matrix": {"row": "skin", "column": "Gene models", "menu": "rnaseq", "group": "ENA"}, "colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]"} 20 BWA alignments of spleen RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site spleen RNA-seq BWA alignments 1 {"type": "rnaseq", "zmenu": "RNASeq_bam", "matrix": {"row": "spleen", "group_order": "1", "column": "BAM files", "menu": "rnaseq", "group": "ENA"}, "colour_key": "bam", "label_key": "RNASeq [biotype]"} 32 Spliced-read support for spleen spleen intron-spanning reads 1 {"type": "rnaseq", "colour_key": "intron_support", "matrix": {"row": "spleen", "column": "Intron-spanning reads", "menu": "rnaseq", "group": "ENA"}, "label_key": "", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 51 Annotation generated from spleen RNA-seq data spleen RNA-seq gene models 1 {"type": "rnaseq", "zmenu": "RNASeq", "matrix": {"row": "spleen", "column": "Gene models", "menu": "rnaseq", "group": "ENA"}, "colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]"} 18 BWA alignments of testis RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site testis RNA-seq BWA alignments 1 {"type": "rnaseq", "zmenu": "RNASeq_bam", "matrix": {"row": "testis", "group_order": "1", "column": "BAM files", "menu": "rnaseq", "group": "ENA"}, "colour_key": "bam", "label_key": "RNASeq [biotype]"} 29 Spliced-read support for testis testis intron-spanning reads 1 {"type": "rnaseq", "colour_key": "intron_support", "matrix": {"row": "testis", "column": "Intron-spanning reads", "menu": "rnaseq", "group": "ENA"}, "label_key": "", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 48 Annotation generated from testis RNA-seq data testis RNA-seq gene models 1 {"type": "rnaseq", "zmenu": "RNASeq", "matrix": {"row": "testis", "column": "Gene models", "menu": "rnaseq", "group": "ENA"}, "colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]"} 14 BWA alignments of thymus RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site thymus RNA-seq BWA alignments 1 {"type": "rnaseq", "zmenu": "RNASeq_bam", "matrix": {"row": "thymus", "group_order": "1", "column": "BAM files", "menu": "rnaseq", "group": "ENA"}, "colour_key": "bam", "label_key": "RNASeq [biotype]"} 27 Spliced-read support for thymus thymus intron-spanning reads 1 {"type": "rnaseq", "colour_key": "intron_support", "matrix": {"row": "thymus", "column": "Intron-spanning reads", "menu": "rnaseq", "group": "ENA"}, "label_key": "", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 47 Annotation generated from thymus RNA-seq data thymus RNA-seq gene models 1 {"type": "rnaseq", "zmenu": "RNASeq", "matrix": {"row": "thymus", "column": "Gene models", "menu": "rnaseq", "group": "ENA"}, "colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]"} 33 Alignments of vomeronasal organ RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Vomeronasal organ RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "ENA", "row": "Vomeronasal organ", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 34 Spliced-read support for vomeronasal organ Vomeronasal organ intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "ENA", "row": "Vomeronasal organ", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 50 Annotation generated from vomeronasal organ RNA-seq data Vomeronasal organ RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "ENA", "row": "Vomeronasal organ", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}}