1 2017-08-13 11:19:18 mt_genbank_import \N NC_011053.1 \N \N \N \N \N \N \N \N \N 2 2017-08-13 11:24:38 repeatmask_repbase_primates \N 2016_08_29 \N \N \N /nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/RepeatMasker -nolow -species "primates" -engine "crossmatch" HiveRepeatMasker \N \N \N 3 2017-08-13 12:20:59 dust \N \N \N \N \N /nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/dustmasker \N HiveDust \N \N \N 4 2017-08-13 12:22:04 trf \N \N \N \N \N /nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/trf \N HiveTRF \N \N \N 5 2017-08-13 12:26:36 eponine \N \N \N \N \N /nfs/software/ensembl/latest/jenv/shims/java -epojar => /nfs/software/ensembl/latest/linuxbrew/Cellar/eponine/1.0/libexec/eponine-scan.jar, -threshold => 0.999 HiveEponine \N \N \N 6 2017-08-13 12:26:52 cpg \N \N \N \N \N /nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/cpg_lh \N HiveCPG \N \N \N 7 2017-08-13 12:28:27 trnascan \N \N \N \N \N /nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/tRNAscan-SE \N HiveTRNAScan \N \N \N 8 2017-08-13 12:30:25 genscan HumanIso.smat \N /nfs/software/ensembl/latest/linuxbrew/share/HumanIso.smat \N \N /nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/genscan \N HiveGenscan \N \N \N 9 2017-08-13 12:39:11 uniprot \N 2017_04 /hps/nobackup/production/ensembl/genebuild/blastdb/uniprot/uniprot_2017_04//uniprot_vertebrate \N \N /nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/blastp -num_threads 3 -window_size 40 \N \N \N \N 10 2017-08-13 12:41:10 vertrna \N 2016_04 /hps/nobackup/production/ensembl/genebuild/blastdb/vertrna/131/embl_vertrna-1 \N \N /nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/tblastn -num_threads 3 -window_size 40 \N \N \N \N 11 2017-08-13 12:46:59 unigene \N 2016_10 /hps/nobackup/production/ensembl/genebuild/blastdb/unigene/unigene \N \N /nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/tblastn -num_threads 3 -window_size 40 \N \N \N \N 12 2017-09-12 16:28:19 ensembl \N \N \N \N \N \N \N \N \N \N \N 16 2017-08-13 20:41:14 cdna_alignment_core \N 2017_07 \N \N \N \N \N \N \N \N \N 18 2017-08-14 02:56:05 ncrna \N 2016_05 /hps/nobackup/production/ensembl/genebuild/blastdb/ncrna/ncrna_2016_05/ \N \N /nfs/production/panda/ensembl/leanne/programs/infernal/infernal-1.0/src/cmsearch \N HiveInfernal \N \N \N 20 2017-08-14 01:26:21 rfamblast \N 2016_05 /hps/nobackup/production/ensembl/genebuild/blastdb/ncrna/ncrna_2016_05/filtered.fasta \N \N /nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/blastn -num_threads 3 -word_size 12 -num_alignments 5000 -num_descriptions 5000 -max_hsps 1 HiveBlastRfam \N \N \N 21 2017-08-14 01:29:55 blastmirna \N 2016_05 /hps/nobackup/production/ensembl/genebuild/blastdb/ncrna/ncrna_2016_05/human_mirnas.fa \N \N /nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/blastn -num_threads 3 HiveBlastmiRNA \N \N \N 24 2017-09-13 13:41:56 other_protein uniprot 2017_04 \N \N \N \N \N \N \N \N \N 25 2017-09-13 13:41:56 projected_transcript homo_sapiens_core_90_38 \N \N \N \N \N \N \N \N \N \N 299 2023-01-25 14:14:43 cdd CDD 3.20 \N InterProScan 5.60-92.0 \N \N \N \N \N \N 272 2021-07-13 16:29:05 gene3d Gene3D 4.3.0 \N InterProScan 5.52-86.0 \N \N \N \N \N \N 324 2024-06-17 06:56:43 hamap HAMAP 2023_05 \N InterProScan 5.68-100.0 \N \N \N \N \N \N 326 2024-06-17 06:57:53 hmmpanther PANTHER 18.0 \N InterProScan 5.68-100.0 \N \N \N \N \N \N 325 2024-06-17 06:57:26 pfam Pfam 37.0 \N InterProScan 5.68-100.0 \N \N \N \N \N \N 327 2024-06-17 06:58:17 pfscan Prosite_profiles 2023_05 \N InterProScan 5.68-100.0 \N \N \N \N \N \N 256 2021-01-10 13:46:46 pirsf PIRSF 3.10 \N InterProScan 5.48-83.0 \N \N \N \N \N \N 257 2021-01-10 13:47:47 prints PRINTS 42.0 \N InterProScan 5.48-83.0 \N \N \N \N \N \N 329 2024-06-17 06:59:05 interpro2go InterPro2GO 2024-05-29 \N interpro2go \N \N \N \N \N \N \N 259 2021-01-10 13:49:15 sfld SFLD 4 \N InterProScan 5.48-83.0 \N \N \N \N \N \N 306 2023-04-11 15:31:58 smart Smart 9.0 \N InterProScan 5.61-93.0 \N \N \N \N \N \N 260 2021-01-10 13:52:22 superfamily SuperFamily 1.75 \N InterProScan 5.48-83.0 \N \N \N \N \N \N 262 2021-01-10 13:53:47 tigrfam TIGRfam 15.0 \N InterProScan 5.48-83.0 \N \N \N \N \N \N 263 2021-01-10 13:56:07 mobidblite MobiDBLite 2.0 \N InterProScan 5.48-83.0 \N \N \N \N \N \N 264 2021-01-10 13:56:19 ncoils ncoils 2.2.1 \N InterProScan 5.48-83.0 \N \N \N \N \N \N 266 2021-01-10 13:58:15 tmhmm TMHMM 2.0c \N InterProScan 5.48-83.0 \N \N \N \N \N \N 330 2024-06-17 07:01:47 scanprosite Prosite_patterns 2023_05 \N InterProScan 5.68-100.0 \N \N \N \N \N \N 267 2021-01-10 13:59:10 seg Seg \N \N seg \N \N \N \N \N \N \N 47 2017-10-15 10:18:09 xrefexoneratedna \N \N \N \N \N \N \N \N \N \N \N 48 2017-10-15 10:18:09 xrefexonerateprotein \N \N \N \N \N \N \N \N \N \N \N 49 2017-10-15 10:20:31 xrefchecksum \N \N \N \N \N \N \N \N \N \N \N 265 2021-01-10 13:56:42 signalp SignalP 4.1 \N InterProScan 5.48-83.0 \N \N \N \N \N \N 331 2024-07-22 10:08:07 goa_import GO \N \N goa_import \N \N \N \N \N \N \N 333 2024-07-25 12:30:07 xref_projection \N \N \N xref_projection \N \N \N \N \N \N \N 332 2024-07-25 11:41:28 alphafold alphafold 4 /hps/scratch/flicek/ensembl/production/ensprod/alphafold_vertebrates/accession_ids.csv \N \N \N \N \N \N \N \N 328 2024-06-17 06:58:57 ncbifam NCBIfam 14.0 \N InterProScan 5.68-100.0 \N \N \N \N \N \N