45	For various species, proteins from <a rel="external" href="http://www.uniprot.org/">UniProtKB</a> are aligned to the genome with <a rel="external" href="http://genome.cshlp.org/content/14/5/988.abstract?maxtoshow=&amp%3bHITS=10&amp%3bhits=10&amp%3bRESULTFORMAT=&amp%3bandorexactfulltext=and&amp%3bsearchid=1&amp%3bFIRSTINDEX=0&amp%3bsortspec=relevance&amp%3bvolume=14&amp%3bfirstpage=988&amp%3bresourcetype=HWCIT">GeneWise</a>.	Other species proteins	1	{"protein_align_feature": {"do_not_display": "1"}}
10	BWA alignments of brain RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	brain RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "brain"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
17	Spliced-read support for brain	brain intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "brain"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
18	Annotation generated from brain RNA-seq data	brain RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "brain"}, "type": "rnaseq", "zmenu": "RNASeq"}
19	Spliced-read support for brain	brain intron-spanning reads	1	\N
21	BWA alignments of duodenum RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	duodenum RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "duodenum"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
27	Spliced-read support for duodenum	duodenum intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "duodenum"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
25	Annotation generated from duodenum RNA-seq data	duodenum RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "duodenum"}, "type": "rnaseq", "zmenu": "RNASeq"}
26	Spliced-read support for duodenum	duodenum intron-spanning reads	1	\N
36	BWA alignments of embryonic tissue RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	embryonic tissue RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "embryonic tissue"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
38	Spliced-read support for embryonic tissue	embryonic tissue intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "embryonic tissue"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
37	Annotation generated from embryonic tissue RNA-seq data	embryonic tissue RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "embryonic tissue"}, "type": "rnaseq", "zmenu": "RNASeq"}
39	Spliced-read support for embryonic tissue	embryonic tissue intron-spanning reads	1	\N
40	BWA alignments of merged RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	merged RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
42	Spliced-read support for merged	merged intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
41	Annotation generated from merged RNA-seq data	merged RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq"}
43	Spliced-read support for merged	merged intron-spanning reads	1	\N
8	BWA alignments of mixed organs RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	mixed organs RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "mixed organs"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
12	Spliced-read support for mixed organs	mixed organs intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "mixed organs"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
11	Annotation generated from mixed organs RNA-seq data	mixed organs RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "mixed organs"}, "type": "rnaseq", "zmenu": "RNASeq"}
13	Spliced-read support for mixed organs	mixed organs intron-spanning reads	1	\N
20	BWA alignments of muscle RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	muscle RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "muscle"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
23	Spliced-read support for muscle	muscle intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "muscle"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
22	Annotation generated from muscle RNA-seq data	muscle RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "muscle"}, "type": "rnaseq", "zmenu": "RNASeq"}
24	Spliced-read support for muscle	muscle intron-spanning reads	1	\N
9	BWA alignments of skin RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	skin RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "skin"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
16	Spliced-read support for skin	skin intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "skin"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
14	Annotation generated from skin RNA-seq data	skin RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "skin"}, "type": "rnaseq", "zmenu": "RNASeq"}
15	Spliced-read support for skin	skin intron-spanning reads	1	\N
28	BWA alignments of testis RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	testis RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "testis"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
30	Spliced-read support for testis	testis intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "testis"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
29	Annotation generated from testis RNA-seq data	testis RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "testis"}, "type": "rnaseq", "zmenu": "RNASeq"}
31	Spliced-read support for testis	testis intron-spanning reads	1	\N
32	BWA alignments of whole RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	whole RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "whole"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
34	Spliced-read support for whole	whole intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "whole"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
33	Annotation generated from whole RNA-seq data	whole RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "whole"}, "type": "rnaseq", "zmenu": "RNASeq"}
35	Spliced-read support for whole	whole intron-spanning reads	1	\N