34 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}} 9 BWA alignments of female whole blood 1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female whole blood 1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female whole blood 1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 11 Spliced-read support for female whole blood 1 female whole blood 1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female whole blood 1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 10 Annotation generated from female whole blood 1 RNA-seq data female whole blood 1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female whole blood 1"}, "type": "rnaseq", "zmenu": "RNASeq"} 12 Spliced-read support for female whole blood 1 female whole blood 1 intron-spanning reads 1 \N 13 BWA alignments of female whole blood 2 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female whole blood 2 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female whole blood 2"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 15 Spliced-read support for female whole blood 2 female whole blood 2 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female whole blood 2"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 14 Annotation generated from female whole blood 2 RNA-seq data female whole blood 2 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female whole blood 2"}, "type": "rnaseq", "zmenu": "RNASeq"} 16 Spliced-read support for female whole blood 2 female whole blood 2 intron-spanning reads 1 \N 17 BWA alignments of male whole blood 1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male whole blood 1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male whole blood 1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 19 Spliced-read support for male whole blood 1 male whole blood 1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male whole blood 1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 18 Annotation generated from male whole blood 1 RNA-seq data male whole blood 1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male whole blood 1"}, "type": "rnaseq", "zmenu": "RNASeq"} 20 Spliced-read support for male whole blood 1 male whole blood 1 intron-spanning reads 1 \N 21 BWA alignments of male whole blood 2 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male whole blood 2 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male whole blood 2"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 23 Spliced-read support for male whole blood 2 male whole blood 2 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male whole blood 2"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 22 Annotation generated from male whole blood 2 RNA-seq data male whole blood 2 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male whole blood 2"}, "type": "rnaseq", "zmenu": "RNASeq"} 24 Spliced-read support for male whole blood 2 male whole blood 2 intron-spanning reads 1 \N 25 BWA alignments of male whole blood 3 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male whole blood 3 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male whole blood 3"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 27 Spliced-read support for male whole blood 3 male whole blood 3 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male whole blood 3"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 26 Annotation generated from male whole blood 3 RNA-seq data male whole blood 3 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male whole blood 3"}, "type": "rnaseq", "zmenu": "RNASeq"} 28 Spliced-read support for male whole blood 3 male whole blood 3 intron-spanning reads 1 \N 29 BWA alignments of merged RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site merged RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 32 Spliced-read support for merged merged intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 30 Annotation generated from merged RNA-seq data merged RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq"} 31 Spliced-read support for merged merged intron-spanning reads 1 \N