59 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}} 42 BWA alignments of embryo RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site embryo RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "embryo"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 44 Spliced-read support for embryo embryo intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "embryo"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 43 Annotation generated from embryo RNA-seq data embryo RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "embryo"}, "type": "rnaseq", "zmenu": "RNASeq"} 45 Spliced-read support for embryo embryo intron-spanning reads 1 \N 10 BWA alignments of lung RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site lung RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "lung"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 12 Spliced-read support for lung lung intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "lung"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 11 Annotation generated from lung RNA-seq data lung RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "lung"}, "type": "rnaseq", "zmenu": "RNASeq"} 13 Spliced-read support for lung lung intron-spanning reads 1 \N 46 BWA alignments of male blood RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male blood RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male blood"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 48 Spliced-read support for male blood male blood intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male blood"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 47 Annotation generated from male blood RNA-seq data male blood RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male blood"}, "type": "rnaseq", "zmenu": "RNASeq"} 49 Spliced-read support for male blood male blood intron-spanning reads 1 \N 14 BWA alignments of male bone marrow RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male bone marrow RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male bone marrow"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 16 Spliced-read support for male bone marrow male bone marrow intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male bone marrow"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 15 Annotation generated from male bone marrow RNA-seq data male bone marrow RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male bone marrow"}, "type": "rnaseq", "zmenu": "RNASeq"} 17 Spliced-read support for male bone marrow male bone marrow intron-spanning reads 1 \N 20 BWA alignments of male brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male brain RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male brain"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 25 Spliced-read support for male brain male brain intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male brain"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 23 Annotation generated from male brain RNA-seq data male brain RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male brain"}, "type": "rnaseq", "zmenu": "RNASeq"} 24 Spliced-read support for male brain male brain intron-spanning reads 1 \N 26 BWA alignments of male brestfilet RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male brestfilet RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male brestfilet"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 28 Spliced-read support for male brestfilet male brestfilet intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male brestfilet"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 27 Annotation generated from male brestfilet RNA-seq data male brestfilet RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male brestfilet"}, "type": "rnaseq", "zmenu": "RNASeq"} 29 Spliced-read support for male brestfilet male brestfilet intron-spanning reads 1 \N 18 BWA alignments of male higher intestine RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male higher intestine RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male higher intestine"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 21 Spliced-read support for male higher intestine male higher intestine intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male higher intestine"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 19 Annotation generated from male higher intestine RNA-seq data male higher intestine RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male higher intestine"}, "type": "rnaseq", "zmenu": "RNASeq"} 22 Spliced-read support for male higher intestine male higher intestine intron-spanning reads 1 \N 30 BWA alignments of male kidney RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male kidney RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male kidney"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 33 Spliced-read support for male kidney male kidney intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male kidney"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 32 Annotation generated from male kidney RNA-seq data male kidney RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male kidney"}, "type": "rnaseq", "zmenu": "RNASeq"} 34 Spliced-read support for male kidney male kidney intron-spanning reads 1 \N 50 BWA alignments of male liver RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male liver RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male liver"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 52 Spliced-read support for male liver male liver intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male liver"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 51 Annotation generated from male liver RNA-seq data male liver RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male liver"}, "type": "rnaseq", "zmenu": "RNASeq"} 53 Spliced-read support for male liver male liver intron-spanning reads 1 \N 31 BWA alignments of male lung RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male lung RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male lung"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 37 Spliced-read support for male lung male lung intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male lung"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 35 Annotation generated from male lung RNA-seq data male lung RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male lung"}, "type": "rnaseq", "zmenu": "RNASeq"} 36 Spliced-read support for male lung male lung intron-spanning reads 1 \N 38 BWA alignments of male testis RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male testis RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male testis"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 40 Spliced-read support for male testis male testis intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male testis"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 39 Annotation generated from male testis RNA-seq data male testis RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male testis"}, "type": "rnaseq", "zmenu": "RNASeq"} 41 Spliced-read support for male testis male testis intron-spanning reads 1 \N 54 BWA alignments of merged RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site merged RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 56 Spliced-read support for merged merged intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 55 Annotation generated from merged RNA-seq data merged RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq"} 57 Spliced-read support for merged merged intron-spanning reads 1 \N