1	2019-01-09 17:42:55	repeatmask_repbase_mammals	\N	\N	\N	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/RepeatMasker	-nolow -species "mammals" -engine "crossmatch"	HiveRepeatMasker	\N	\N	\N
2	2019-01-09 18:43:15	repeatmask_repeatmodeler	\N	\N	\N	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/RepeatMasker	-nolow -lib "/hps/nobackup2/production/ensembl/genebuild/custom_repeat_libraries/repeatmodeler/species/monodelphis_domestica/monodelphis_domestica.repeatmodeler.fa" -engine "crossmatch"	HiveRepeatMasker	\N	\N	\N
3	2019-01-10 02:24:02	dust	\N	\N	\N	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/dustmasker	\N	HiveDust	\N	\N	\N
4	2019-01-10 02:24:41	trf	\N	\N	\N	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/trf	\N	HiveTRF	\N	\N	\N
5	2019-01-10 02:30:15	eponine	\N	\N	\N	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/java	-epojar => /nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/opt/eponine/libexec/eponine-scan.jar, -threshold => 0.999	HiveEponine	\N	\N	\N
6	2019-01-10 02:30:22	cpg	\N	\N	\N	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/cpg_lh	\N	HiveCPG	\N	\N	\N
7	2019-01-10 02:31:22	trnascan	\N	\N	\N	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/tRNAscan-SE	\N	HiveTRNAScan	\N	\N	\N
8	2019-01-10 02:43:13	genscan	HumanIso.smat	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/share/HumanIso.smat	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/genscan	\N	HiveGenscan	\N	\N	\N
9	2019-05-28 16:21:19	ensembl	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
12	2019-03-24 15:52:27	rnaseq_intron_support	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
14	2019-02-16 04:44:28	ncrna	\N	\N	/hps/nobackup2/production/ensembl/osagie/genome_annotations/vertebrate_reannotations/builds/mammals/monodelphis_domestic	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/cmsearch	\N	HiveCMSearch	\N	\N	/hps/nobackup2/production/ensembl/genebu
15	2019-02-16 04:25:29	blastmirna	\N	\N	/hps/nobackup2/production/ensembl/genebuild/blastdb/ncrna/mirbase_22/all_mirnas.fa	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/blastn	 -num_threads 3 	HiveBlastmiRNA	\N	\N	\N
41	2019-06-25 12:33:45	mt_genbank_import	\N	NC_006299.1	\N	\N	\N	\N	\N	\N	\N	\N	\N
40	2019-02-16 04:44:28	rfamcmsearch	\N	14.0	\N	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/cmsearch	\N	HiveCMSearch	\N	\N	\N
38	2019-06-12 17:16:31	other_protein	uniprot	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
39	2019-06-12 17:16:31	projected_transcript	homo_sapiens_core_91_38	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
42	2019-07-05 09:42:15	xrefexoneratedna	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
43	2019-07-05 09:42:15	xrefexonerateprotein	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
44	2019-07-05 09:51:41	xrefchecksum	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
45	2019-08-23 00:00:00	longnoncodingdensity	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
46	2019-08-23 00:00:00	pseudogenedensity	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
47	2019-08-23 00:00:00	codingdensity	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
48	2019-08-23 00:00:00	shortnoncodingdensity	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
49	2019-08-23 00:00:00	percentagerepeat	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
50	2019-08-23 00:00:00	percentgc	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
255	2023-01-25 15:16:28	cdd	CDD	3.20	\N	InterProScan	5.60-92.0	\N	\N	\N	\N	\N	\N
228	2021-07-13 17:03:40	gene3d	Gene3D	4.3.0	\N	InterProScan	5.52-86.0	\N	\N	\N	\N	\N	\N
285	2024-06-17 11:38:37	hmmpanther	PANTHER	18.0	\N	InterProScan	5.68-100.0	\N	\N	\N	\N	\N	\N
287	2024-06-17 11:38:53	pfam	Pfam	37.0	\N	InterProScan	5.68-100.0	\N	\N	\N	\N	\N	\N
286	2024-06-17 11:38:42	pfscan	Prosite_profiles	2023_05	\N	InterProScan	5.68-100.0	\N	\N	\N	\N	\N	\N
209	2021-01-10 14:22:38	pirsf	PIRSF	3.10	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
210	2021-01-10 14:23:06	prints	PRINTS	42.0	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
265	2023-06-17 22:33:37	smart	Smart	9.0	\N	InterProScan	5.62-94.0	\N	\N	\N	\N	\N	\N
213	2021-01-10 14:24:27	sfld	SFLD	4	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
215	2021-01-10 14:26:20	superfamily	SuperFamily	1.75	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
216	2021-01-10 14:26:31	tigrfam	TIGRfam	15.0	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
217	2021-01-10 14:27:52	mobidblite	MobiDBLite	2.0	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
219	2021-01-10 14:29:10	tmhmm	TMHMM	2.0c	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
222	2021-01-10 14:31:46	ncoils	ncoils	2.2.1	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
218	2021-01-10 14:28:54	signalp	SignalP	4.1	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
282	2024-06-17 11:34:45	hamap	HAMAP	2023_05	\N	InterProScan	5.68-100.0	\N	\N	\N	\N	\N	\N
71	2024-07-15 00:00:00	snpdensity	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
289	2024-07-22 10:07:59	goa_import	GO	\N	\N	goa_import	\N	\N	\N	\N	\N	\N	\N
291	2024-07-25 12:30:07	xref_projection	\N	\N	\N	xref_projection	\N	\N	\N	\N	\N	\N	\N
120	2020-04-08 16:25:29	cdna_alignment_core	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
220	2021-01-10 14:30:42	seg	Seg	\N	\N	seg	\N	\N	\N	\N	\N	\N	\N
290	2024-07-23 11:34:53	alphafold	alphafold	4	/hps/scratch/flicek/ensembl/production/ensprod/alphafold_vertebrates/accession_ids.csv	\N	\N	\N	\N	\N	\N	\N	\N
288	2024-06-17 11:39:12	ncbifam	NCBIfam	14.0	\N	InterProScan	5.68-100.0	\N	\N	\N	\N	\N	\N
283	2024-06-17 11:38:29	scanprosite	Prosite_patterns	2023_05	\N	InterProScan	5.68-100.0	\N	\N	\N	\N	\N	\N
284	2024-06-17 11:38:29	interpro2go	InterPro2GO	2024-05-29	\N	interpro2go	\N	\N	\N	\N	\N	\N	\N