1 \N schema_type core 2 \N schema_version 113 3 \N patch patch_85_86_a.sql|schema_version 4 \N patch patch_85_86_b.sql|add dna_align_feature_attrib table 5 \N patch patch_85_86_c.sql|meta_case_insensitive 6 1 assembly.mapping scaffold:MicOch1.0|contig 7 1 assembly.mapping chromosome:MicOch1.0|contig 8 1 assembly.mapping chromosome:MicOch1.0|scaffold:MicOch1.0 9 1 genebuild.id 44 4208 1 xref.timestamp 2024-06-29 06:07:10 11 1 assembly.coverage_depth high 12 1 assembly.default MicOch1.0 4185 1 species.taxonomy_id 79684 14 1 assembly.date 2012-12 15 1 assembly.name MicOch1.0 3733 1 species.stable_id_prefix ENSMOC 3735 1 species.common_name vole 4182 1 species.display_name Prairie vole 4186 1 species.scientific_name Microtus ochrogaster 4184 1 species.production_name microtus_ochrogaster 4183 1 species.url Microtus_ochrogaster 62 1 genebuild.last_geneset_update 2017-02 91 1 genebuild.level toplevel 92 1 transcriptbuild.level toplevel 93 1 exonbuild.level toplevel 94 1 repeat_featurebuild.level toplevel 95 1 dna_align_featurebuild.level toplevel 96 1 protein_align_featurebuild.level toplevel 97 1 simple_featurebuild.level toplevel 98 1 prediction_transcriptbuild.level toplevel 99 1 prediction_exonbuild.level toplevel 3831 1 repeat.analysis dust 82 1 genebuild.start_date 2016-10-ensembl 83 1 genebuild.method full_genebuild 3766 1 species.division EnsemblVertebrates 85 1 assembly.web_accession_type GenBank Assembly ID 86 1 assembly.web_accession_source NCBI 103 1 genebuild.initial_release_date 2017-02 104 1 assembly.accession GCA_000317375.1 105 \N patch patch_86_87_a.sql|schema_version 106 \N patch patch_86_87_b.sql|meta_value_NOT_NULL 107 \N patch patch_86_87_c.sql|datetime_default_NULL 108 \N patch patch_87_88_a.sql|schema_version 109 \N patch patch_87_88_b.sql|seq_region_name_255 110 \N patch patch_87_88_c.sql|protein_featue_uniqueness 111 \N patch patch_88_89_a.sql|schema_version 112 \N patch patch_89_90_a.sql|schema_version 113 \N patch patch_89_90_b.sql|remove_status 114 1 annotation.provider_name Ensembl 115 1 annotation.provider_url www.ensembl.org 852 \N patch patch_89_90_c.sql|pf_hit_name_case_sensitive 1451 \N patch patch_90_91_a.sql|schema_version 1452 \N patch patch_90_91_b.sql|align_type 1453 \N patch patch_90_91_c.sql|protein_align_type 1454 \N patch patch_90_91_d.sql|remove_external_data 4150 1 species.alias moch 4165 1 species.classification Mammalia 3571 \N patch patch_91_92_a.sql|schema_version 3572 \N patch patch_91_92_b.sql|add_cigar_line_align_type 4159 1 species.classification Rodentia 4145 1 species.alias Prairie vole 3666 \N patch patch_92_93_a.sql|schema_version 3667 \N patch patch_92_93_b.sql|biotype_table 3668 \N patch patch_92_93_c.sql|collate_index_interpro 3670 \N patch patch_93_94_a.sql|schema_version 3671 \N patch patch_93_94_b.sql|nullable_ox_analysis 3672 \N patch patch_93_94_c.sql|default_aln_type 4146 1 species.alias m_ochrogaster 4164 1 species.classification Theria 3720 \N patch patch_94_95_a.sql|schema_version 3721 \N patch patch_94_95_b.sql|vertebrate_division_rename 4178 1 species.classification Eumetazoa 3769 \N patch patch_95_96_a.sql|schema_version 3771 \N patch patch_96_97_a.sql|schema_version 3772 \N patch patch_96_97_b.sql|biotype_so_term 3773 \N patch patch_96_97_c.sql|rnaproduct_tables 3774 \N patch patch_96_97_d.sql|add_object_type_rnaproduct 3775 \N patch patch_96_97_e.sql|add_stable_id_event_type_rnaproduct 4151 1 species.alias mochrogaster 4171 1 species.classification Teleostomi 4169 1 species.classification Sarcopterygii 3820 \N patch patch_97_98_a.sql|schema_version 3822 \N patch patch_98_99_a.sql|schema_version 4233 1 sample.location_param 5:74322074-74363949 4234 1 sample.location_text 5:74322074-74363949 4229 1 sample.gene_param ENSMOCG00000011980 4230 1 sample.gene_text ENSMOCG00000011980 4231 1 sample.transcript_param ENSMOCT00000000001 4232 1 sample.transcript_text ENSMOCT00000000001 4235 1 sample.search_text Clpx 3832 1 repeat.analysis repeatmask_repbase_rodents 3833 1 repeat.analysis trf 3834 \N patch patch_99_100_a.sql|schema_version 3835 \N patch patch_99_100_b.sql|alter_externaldb_type_notnull 3836 \N patch patch_99_100_c.sql|alter_mapping_session_assembly_length 3837 \N patch patch_100_101_a.sql|schema_version 3838 1 assembly.provider_name 3839 1 assembly.provider_url 3840 \N patch patch_101_102_a.sql|schema_version 3841 \N patch patch_102_103_a.sql|schema_version 3842 \N patch patch_103_104_a.sql|schema_version 3843 \N patch patch_104_105_a.sql|schema_version 4237 1 sample.vep_hgvs ENSMOCT00000000366.1:c.4A>T\\nENSMOCT00000000562.1:c.161+16C>T\\nENSMOCT00000000441.1:c.4del 4238 1 sample.vep_vcf 1 23719298 . A T . . .\\n2 4164800 . C T . . .\\n5 13598836 . GA G . . . 3853 1 sample.vep_spdi NC_022009.1:23719297:A:T\\nNC_022010.1:4164799:C:T\\nNC_022012.1:13598836:A: 4236 1 sample.vep_ensembl 1 23719298 23719298 A/T 1\\n2 4164800 4164800 C/T 1\\n5 13598837 13598837 A/- 1 3855 \N patch patch_105_106_a.sql|schema_version 4149 1 species.alias microtus_ochrogaster 4160 1 species.classification Glires 4161 1 species.classification Euarchontoglires 4162 1 species.classification Boreoeutheria 4163 1 species.classification Eutheria 3909 \N patch patch_106_107_a.sql|schema_version 3910 \N patch patch_106_107_b.sql|Added index for seq_region_mapping 3921 \N patch patch_107_108_a.sql|schema_version 3975 \N patch patch_108_109_a.sql|schema_version 3976 \N patch patch_108_109_b.sql|Added xref source GeneCards into external_db 3987 \N patch patch_109_110_a.sql|schema_version 3988 \N patch patch_109_110_b.sql|Add IS_PAR relationship to link X- and Y-PAR genes 3989 \N patch patch_109_110_c.sql|Allow gene id to belong to multiple alt allele groups 4000 \N patch patch_110_111_a.sql|schema_version 4148 1 species.alias microtus ochrogaster 4173 1 species.classification Vertebrata 4174 1 species.classification Craniata 4168 1 species.classification Dipnotetrapodomorpha 4054 \N patch patch_111_112_a.sql|schema_version 4055 \N patch patch_111_112_b.sql|Allow meta_value to be null 4152 1 species.alias pvole 4172 1 species.classification Gnathostomata 4154 1 species.classification Microtus ochrogaster 4155 1 species.classification Arvicolinae 4156 1 species.classification Cricetidae 4157 1 species.classification Muroidea 4158 1 species.classification Myomorpha 4099 \N patch patch_112_113_a.sql|schema_version 4100 \N patch patch_112_113_b.sql|Ensure meta_value is not null 4147 1 species.alias micoch 4144 1 species.alias 79684 4177 1 species.classification Bilateria 4175 1 species.classification Chordata 4176 1 species.classification Deuterostomia 4170 1 species.classification Euteleostomi 4166 1 species.classification Amniota 4167 1 species.classification Tetrapoda 4153 1 species.alias vole 4179 1 species.classification Metazoa 4180 1 species.classification Opisthokonta 4181 1 species.classification Eukaryota