20 BWA alignments of brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site brain RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "label_key": "RNASeq [biotype]", "colour_key": "bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "row": "brain", "group": "ENA", "group_order": "1"}, "type": "rnaseq"} 22 Spliced-read support for brain brain intron-spanning reads 1 {"label_key": "", "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "brain", "group": "ENA"}, "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 21 Annotation generated from brain RNA-seq data brain RNA-seq gene models 1 {"zmenu": "RNASeq", "label_key": "RNASeq [biotype]", "colour_key": "human_rnaseq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "brain", "group": "ENA"}, "type": "rnaseq"} 23 Spliced-read support for brain brain intron-spanning reads 1 \N 24 BWA alignments of dorsal skin RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site dorsal skin RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "label_key": "RNASeq [biotype]", "colour_key": "bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "row": "dorsal skin", "group": "ENA", "group_order": "1"}, "type": "rnaseq"} 26 Spliced-read support for dorsal skin dorsal skin intron-spanning reads 1 {"label_key": "", "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "dorsal skin", "group": "ENA"}, "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 25 Annotation generated from dorsal skin RNA-seq data dorsal skin RNA-seq gene models 1 {"zmenu": "RNASeq", "label_key": "RNASeq [biotype]", "colour_key": "human_rnaseq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "dorsal skin", "group": "ENA"}, "type": "rnaseq"} 27 Spliced-read support for dorsal skin dorsal skin intron-spanning reads 1 \N 16 BWA alignments of maxillary skin RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site maxillary skin RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "label_key": "RNASeq [biotype]", "colour_key": "bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "row": "maxillary skin", "group": "ENA", "group_order": "1"}, "type": "rnaseq"} 18 Spliced-read support for maxillary skin maxillary skin intron-spanning reads 1 {"label_key": "", "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "maxillary skin", "group": "ENA"}, "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 17 Annotation generated from maxillary skin RNA-seq data maxillary skin RNA-seq gene models 1 {"zmenu": "RNASeq", "label_key": "RNASeq [biotype]", "colour_key": "human_rnaseq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "maxillary skin", "group": "ENA"}, "type": "rnaseq"} 19 Spliced-read support for maxillary skin maxillary skin intron-spanning reads 1 \N 28 BWA alignments of merged RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site merged RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "label_key": "RNASeq [biotype]", "colour_key": "bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "row": "merged", "group": "ENA", "group_order": "1"}, "type": "rnaseq"} 30 Spliced-read support for merged merged intron-spanning reads 1 {"label_key": "", "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "merged", "group": "ENA"}, "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 29 Annotation generated from merged RNA-seq data merged RNA-seq gene models 1 {"zmenu": "RNASeq", "label_key": "RNASeq [biotype]", "colour_key": "human_rnaseq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "merged", "group": "ENA"}, "type": "rnaseq"} 31 Spliced-read support for merged merged intron-spanning reads 1 \N 12 BWA alignments of ovary RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site ovary RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "label_key": "RNASeq [biotype]", "colour_key": "bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "row": "ovary", "group": "ENA", "group_order": "1"}, "type": "rnaseq"} 14 Spliced-read support for ovary ovary intron-spanning reads 1 {"label_key": "", "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "ovary", "group": "ENA"}, "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 13 Annotation generated from ovary RNA-seq data ovary RNA-seq gene models 1 {"zmenu": "RNASeq", "label_key": "RNASeq [biotype]", "colour_key": "human_rnaseq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "ovary", "group": "ENA"}, "type": "rnaseq"} 15 Spliced-read support for ovary ovary intron-spanning reads 1 \N 8 BWA alignments of testis RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site testis RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "label_key": "RNASeq [biotype]", "colour_key": "bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "row": "testis", "group": "ENA", "group_order": "1"}, "type": "rnaseq"} 10 Spliced-read support for testis testis intron-spanning reads 1 {"label_key": "", "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "testis", "group": "ENA"}, "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "zmenu": "Supporting_alignment"} 9 Annotation generated from testis RNA-seq data testis RNA-seq gene models 1 {"zmenu": "RNASeq", "label_key": "RNASeq [biotype]", "colour_key": "human_rnaseq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "testis", "group": "ENA"}, "type": "rnaseq"} 11 Spliced-read support for testis testis intron-spanning reads 1 \N 33 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}}