245 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}}
249 Spliced RNASeq read support for spotted gar in brain Spotted gar brain intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "column_order": 2, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "brain"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
220 Annotation generated using only RNASeq data from spotted gar brain tissue. Spotted gar brain RNASeq 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "column_order": 1, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "brain"}, "type": "rnaseq", "zmenu": "RNASeq"}
237 Spliced RNASeq read support for spotted gar for brain. Spotted gar brain intron-spanning reads 1 \N
260 Paired-end 101 bp RNAseq reads from a spotted gar. Data were obtained from Broad Institute and aligned to the LepOcu1 assembly using BWA. Download this BAM file from the Ensembl FTP (file:LepOcu1.Broad.brain.1.bam). Spotted gar brain RNAseq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "column_order": 3, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "brain"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
259 Paired-end 101 bp RNAseq reads from a spotted gar. Data were obtained from Broad Institute and aligned to the LepOcu1 assembly using BWA. Download this BAM file from the Ensembl FTP (file:LepOcu1.Broad.embryo.1.bam). Spotted gar embryo RNAseq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "column_order": 3, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "embryo"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
258 Paired-end 101 bp RNAseq reads from a spotted gar. Data were obtained from Broad Institute and aligned to the LepOcu1 assembly using BWA. Download this BAM file from the Ensembl FTP (file:LepOcu1.Broad.eye.1.bam). Spotted gar eye RNAseq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "column_order": 3, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "eye"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
265 Paired-end 101 bp RNAseq reads from a spotted gar. Data were obtained from Broad Institute and aligned to the LepOcu1 assembly using BWA. Download this BAM file from the Ensembl FTP (file:LepOcu1.Broad.heart.1.bam). Spotted gar heart RNAseq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "column_order": 3, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "heart"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
267 Paired-end 101 bp RNAseq reads from a spotted gar. Data were obtained from Broad Institute and aligned to the LepOcu1 assembly using BWA. Download this BAM file from the Ensembl FTP (file:LepOcu1.Broad.kidney.1.bam). Spotted gar kidney RNAseq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "column_order": 3, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "kidney"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
263 Paired-end 101 bp RNAseq reads from a spotted gar. Data were obtained from Broad Institute and aligned to the LepOcu1 assembly using BWA. Download this BAM file from the Ensembl FTP (file:LepOcu1.Broad.larvae.1.bam). Spotted gar larvae RNAseq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "column_order": 3, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "larvae"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
261 Paired-end 101 bp RNAseq reads from a spotted gar. Data were obtained from Broad Institute and aligned to the LepOcu1 assembly using BWA. Download this BAM file from the Ensembl FTP (file:LepOcu1.Broad.liver.1.bam). Spotted gar liver RNAseq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "column_order": 3, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "liver"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
257 Paired-end 101 bp RNAseq reads from a spotted gar. Data were obtained from Broad Institute and aligned to the LepOcu1 assembly using BWA. Download this BAM file from the Ensembl FTP (file:LepOcu1.Broad.merged.1.bam). Spotted gar merged RNAseq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "column_order": 3, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
264 Paired-end 101 bp RNAseq reads from a spotted gar. Data were obtained from Broad Institute and aligned to the LepOcu1 assembly using BWA. Download this BAM file from the Ensembl FTP (file:LepOcu1.Broad.muscle.1.bam). Spotted gar muscle RNAseq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "column_order": 3, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "muscle"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
266 Paired-end 101 bp RNAseq reads from a spotted gar. Data were obtained from Broad Institute and aligned to the LepOcu1 assembly using BWA. Download this BAM file from the Ensembl FTP (file:LepOcu1.Broad.skin.1.bam). Spotted gar skin RNAseq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "column_order": 3, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "skin"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
262 Paired-end 101 bp RNAseq reads from a spotted gar. Data were obtained from Broad Institute and aligned to the LepOcu1 assembly using BWA. Download this BAM file from the Ensembl FTP (file:LepOcu1.Broad.testis.1.bam). Spotted gar testis RNAseq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "column_order": 3, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "testis"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
248 Spliced RNASeq read support for spotted gar in embryo Spotted gar embryo intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "column_order": 2, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "embryo"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
227 Annotation generated using only RNASeq data from spotted gar embryo tissue. Spotted gar embryo RNASeq 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "column_order": 1, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "embryo"}, "type": "rnaseq", "zmenu": "RNASeq"}
236 Spliced RNASeq read support for spotted gar for embryo. Spotted gar embryo intron-spanning reads 1 \N
247 Spliced RNASeq read support for spotted gar in eye Spotted gar eye intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "column_order": 2, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "eye"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
221 Annotation generated using only RNASeq data from spotted gar eye tissue. Spotted gar eye RNASeq 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "column_order": 1, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "eye"}, "type": "rnaseq", "zmenu": "RNASeq"}
235 Spliced RNASeq read support for spotted gar for eye. Spotted gar eye intron-spanning reads 1 \N
254 Spliced RNASeq read support for spotted gar in heart Spotted gar heart intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "column_order": 2, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "heart"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
222 Annotation generated using only RNASeq data from spotted gar heart tissue. Spotted gar heart RNASeq 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "column_order": 1, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "heart"}, "type": "rnaseq", "zmenu": "RNASeq"}
242 Spliced RNASeq read support for spotted gar for heart. Spotted gar heart intron-spanning reads 1 \N
256 Spliced RNASeq read support for spotted gar in kidney Spotted gar kidney intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "column_order": 2, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "kidney"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
223 Annotation generated using only RNASeq data from spotted gar kidney tissue. Spotted gar kidney RNASeq 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "column_order": 1, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "kidney"}, "type": "rnaseq", "zmenu": "RNASeq"}
244 Spliced RNASeq read support for spotted gar for kidney. Spotted gar kidney intron-spanning reads 1 \N
252 Spliced RNASeq read support for spotted gar in larvae Spotted gar larvae intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "column_order": 2, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "larvae"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
228 Annotation generated using only RNASeq data from spotted gar larvae tissue. Spotted gar larvae RNASeq 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "column_order": 1, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "larvae"}, "type": "rnaseq", "zmenu": "RNASeq"}
240 Spliced RNASeq read support for spotted gar for larvae. Spotted gar larvae intron-spanning reads 1 \N
250 Spliced RNASeq read support for spotted gar in liver Spotted gar liver intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "column_order": 2, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "liver"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
224 Annotation generated using only RNASeq data from spotted gar liver tissue. Spotted gar liver RNASeq 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "column_order": 1, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "liver"}, "type": "rnaseq", "zmenu": "RNASeq"}
238 Spliced RNASeq read support for spotted gar for liver. Spotted gar liver intron-spanning reads 1 \N
246 Spliced RNASeq read support for 10 L. oculatus tissues. Merged intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "column_order": 2, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
232 Annotation generated using only RNASeq data from spotted gar merged tissue. Spotted gar merged RNASeq 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "column_order": 1, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq"}
234 Spliced RNASeq read support for spotted gar for merged. Spotted gar merged intron-spanning reads 1 \N
253 Spliced RNASeq read support for spotted gar in muscle Spotted gar muscle intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "column_order": 2, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "muscle"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
225 Annotation generated using only RNASeq data from spotted gar muscle tissue. Spotted gar muscle RNASeq 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "column_order": 1, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "muscle"}, "type": "rnaseq", "zmenu": "RNASeq"}
241 Spliced RNASeq read support for spotted gar for muscle. Spotted gar muscle intron-spanning reads 1 \N
255 Spliced RNASeq read support for spotted gar in skin Spotted gar skin intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "column_order": 2, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "skin"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
226 Annotation generated using only RNASeq data from spotted gar skin tissue. Spotted gar skin RNASeq 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "column_order": 1, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "skin"}, "type": "rnaseq", "zmenu": "RNASeq"}
243 Spliced RNASeq read support for spotted gar for skin. Spotted gar skin intron-spanning reads 1 \N
251 Spliced RNASeq read support for spotted gar in testis Spotted gar testis intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "column_order": 2, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "testis"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
229 Annotation generated using only RNASeq data from spotted gar testis tissue. Spotted gar testis RNASeq 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "column_order": 1, "group": "Broad Institute", "group_order": "1", "menu": "rnaseq", "row": "testis"}, "type": "rnaseq", "zmenu": "RNASeq"}
239 Spliced RNASeq read support for spotted gar for testis. Spotted gar testis intron-spanning reads 1 \N