72 BWA alignments of brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site brain RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "brain"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 77 Spliced-read support for brain brain intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "brain"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 76 Annotation generated from brain RNA-seq data brain RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "brain"}, "type": "rnaseq", "zmenu": "RNASeq"} 78 Spliced-read support for brain brain intron-spanning reads 1 \N 59 BWA alignments of eye RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site eye RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "eye"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 61 Spliced-read support for eye eye intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "eye"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 60 Annotation generated from eye RNA-seq data eye RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "eye"}, "type": "rnaseq", "zmenu": "RNASeq"} 62 Spliced-read support for eye eye intron-spanning reads 1 \N 31 BWA alignments of gill filament 1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site gill filament 1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "gill filament 1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 33 Spliced-read support for gill filament 1 gill filament 1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "gill filament 1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 32 Annotation generated from gill filament 1 RNA-seq data gill filament 1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "gill filament 1"}, "type": "rnaseq", "zmenu": "RNASeq"} 34 Spliced-read support for gill filament 1 gill filament 1 intron-spanning reads 1 \N 67 BWA alignments of gonad 1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site gonad 1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "gonad 1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 69 Spliced-read support for gonad 1 gonad 1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "gonad 1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 68 Annotation generated from gonad 1 RNA-seq data gonad 1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "gonad 1"}, "type": "rnaseq", "zmenu": "RNASeq"} 70 Spliced-read support for gonad 1 gonad 1 intron-spanning reads 1 \N 15 BWA alignments of gonad 2 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site gonad 2 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "gonad 2"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 17 Spliced-read support for gonad 2 gonad 2 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "gonad 2"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 16 Annotation generated from gonad 2 RNA-seq data gonad 2 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "gonad 2"}, "type": "rnaseq", "zmenu": "RNASeq"} 18 Spliced-read support for gonad 2 gonad 2 intron-spanning reads 1 \N 19 BWA alignments of gonad 3 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site gonad 3 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "gonad 3"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 21 Spliced-read support for gonad 3 gonad 3 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "gonad 3"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 20 Annotation generated from gonad 3 RNA-seq data gonad 3 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "gonad 3"}, "type": "rnaseq", "zmenu": "RNASeq"} 22 Spliced-read support for gonad 3 gonad 3 intron-spanning reads 1 \N 47 BWA alignments of gonad 4 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site gonad 4 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "gonad 4"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 49 Spliced-read support for gonad 4 gonad 4 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "gonad 4"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 48 Annotation generated from gonad 4 RNA-seq data gonad 4 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "gonad 4"}, "type": "rnaseq", "zmenu": "RNASeq"} 50 Spliced-read support for gonad 4 gonad 4 intron-spanning reads 1 \N 79 BWA alignments of heart 1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site heart 1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "heart 1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 81 Spliced-read support for heart 1 heart 1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "heart 1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 80 Annotation generated from heart 1 RNA-seq data heart 1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "heart 1"}, "type": "rnaseq", "zmenu": "RNASeq"} 82 Spliced-read support for heart 1 heart 1 intron-spanning reads 1 \N 39 BWA alignments of intestine RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site intestine RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "intestine"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 41 Spliced-read support for intestine intestine intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "intestine"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 40 Annotation generated from intestine RNA-seq data intestine RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "intestine"}, "type": "rnaseq", "zmenu": "RNASeq"} 42 Spliced-read support for intestine intestine intron-spanning reads 1 \N 83 BWA alignments of liver 1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site liver 1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "liver 1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 85 Spliced-read support for liver 1 liver 1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "liver 1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 84 Annotation generated from liver 1 RNA-seq data liver 1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "liver 1"}, "type": "rnaseq", "zmenu": "RNASeq"} 86 Spliced-read support for liver 1 liver 1 intron-spanning reads 1 \N 51 BWA alignments of liver 2 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site liver 2 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "liver 2"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 53 Spliced-read support for liver 2 liver 2 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "liver 2"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 52 Annotation generated from liver 2 RNA-seq data liver 2 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "liver 2"}, "type": "rnaseq", "zmenu": "RNASeq"} 54 Spliced-read support for liver 2 liver 2 intron-spanning reads 1 \N 55 BWA alignments of liver 3 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site liver 3 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "liver 3"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 57 Spliced-read support for liver 3 liver 3 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "liver 3"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 56 Annotation generated from liver 3 RNA-seq data liver 3 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "liver 3"}, "type": "rnaseq", "zmenu": "RNASeq"} 58 Spliced-read support for liver 3 liver 3 intron-spanning reads 1 \N 71 BWA alignments of liver 4 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site liver 4 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "liver 4"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 74 Spliced-read support for liver 4 liver 4 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "liver 4"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 73 Annotation generated from liver 4 RNA-seq data liver 4 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "liver 4"}, "type": "rnaseq", "zmenu": "RNASeq"} 75 Spliced-read support for liver 4 liver 4 intron-spanning reads 1 \N 87 BWA alignments of merged RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site merged RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 90 Spliced-read support for merged merged intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 88 Annotation generated from merged RNA-seq data merged RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq"} 89 Spliced-read support for merged merged intron-spanning reads 1 \N 11 BWA alignments of olfactory pit RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site olfactory pit RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "olfactory pit"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 13 Spliced-read support for olfactory pit olfactory pit intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "olfactory pit"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 12 Annotation generated from olfactory pit RNA-seq data olfactory pit RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "olfactory pit"}, "type": "rnaseq", "zmenu": "RNASeq"} 14 Spliced-read support for olfactory pit olfactory pit intron-spanning reads 1 \N 35 BWA alignments of pyloric caeca RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site pyloric caeca RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "pyloric caeca"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 37 Spliced-read support for pyloric caeca pyloric caeca intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "pyloric caeca"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 36 Annotation generated from pyloric caeca RNA-seq data pyloric caeca RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "pyloric caeca"}, "type": "rnaseq", "zmenu": "RNASeq"} 38 Spliced-read support for pyloric caeca pyloric caeca intron-spanning reads 1 \N 63 BWA alignments of skeletal muscle 1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site skeletal muscle 1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "skeletal muscle 1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 65 Spliced-read support for skeletal muscle 1 skeletal muscle 1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "skeletal muscle 1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 64 Annotation generated from skeletal muscle 1 RNA-seq data skeletal muscle 1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "skeletal muscle 1"}, "type": "rnaseq", "zmenu": "RNASeq"} 66 Spliced-read support for skeletal muscle 1 skeletal muscle 1 intron-spanning reads 1 \N 23 BWA alignments of skin 1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site skin 1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "skin 1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 25 Spliced-read support for skin 1 skin 1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "skin 1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 24 Annotation generated from skin 1 RNA-seq data skin 1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "skin 1"}, "type": "rnaseq", "zmenu": "RNASeq"} 27 Spliced-read support for skin 1 skin 1 intron-spanning reads 1 \N 43 BWA alignments of spleen 1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site spleen 1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "spleen 1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 45 Spliced-read support for spleen 1 spleen 1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "spleen 1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 44 Annotation generated from spleen 1 RNA-seq data spleen 1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "spleen 1"}, "type": "rnaseq", "zmenu": "RNASeq"} 46 Spliced-read support for spleen 1 spleen 1 intron-spanning reads 1 \N 26 BWA alignments of swim bladder RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site swim bladder RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "swim bladder"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 29 Spliced-read support for swim bladder swim bladder intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "swim bladder"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 28 Annotation generated from swim bladder RNA-seq data swim bladder RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "swim bladder"}, "type": "rnaseq", "zmenu": "RNASeq"} 30 Spliced-read support for swim bladder swim bladder intron-spanning reads 1 \N 92 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}}