38 BWA alignments of brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site brain RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "brain"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 40 Spliced-read support for brain brain intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "brain"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 39 Annotation generated from brain RNA-seq data brain RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "brain"}, "type": "rnaseq", "zmenu": "RNASeq"} 41 Spliced-read support for brain brain intron-spanning reads 1 \N 26 BWA alignments of female liver RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female liver RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female liver"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 28 Spliced-read support for female liver female liver intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female liver"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 27 Annotation generated from female liver RNA-seq data female liver RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female liver"}, "type": "rnaseq", "zmenu": "RNASeq"} 29 Spliced-read support for female liver female liver intron-spanning reads 1 \N 14 BWA alignments of gill RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site gill RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "gill"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 16 Spliced-read support for gill gill intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "gill"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 15 Annotation generated from gill RNA-seq data gill RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "gill"}, "type": "rnaseq", "zmenu": "RNASeq"} 17 Spliced-read support for gill gill intron-spanning reads 1 \N 50 BWA alignments of liver RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site liver RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "liver"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 52 Spliced-read support for liver liver intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "liver"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 51 Annotation generated from liver RNA-seq data liver RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "liver"}, "type": "rnaseq", "zmenu": "RNASeq"} 53 Spliced-read support for liver liver intron-spanning reads 1 \N 34 BWA alignments of male liver RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male liver RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male liver"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 36 Spliced-read support for male liver male liver intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male liver"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 35 Annotation generated from male liver RNA-seq data male liver RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male liver"}, "type": "rnaseq", "zmenu": "RNASeq"} 37 Spliced-read support for male liver male liver intron-spanning reads 1 \N 62 BWA alignments of merged RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site merged RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 64 Spliced-read support for merged merged intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 63 Annotation generated from merged RNA-seq data merged RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq"} 65 Spliced-read support for merged merged intron-spanning reads 1 \N 22 BWA alignments of muscle RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site muscle RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "muscle"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 24 Spliced-read support for muscle muscle intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "muscle"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 23 Annotation generated from muscle RNA-seq data muscle RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "muscle"}, "type": "rnaseq", "zmenu": "RNASeq"} 25 Spliced-read support for muscle muscle intron-spanning reads 1 \N 46 BWA alignments of olfactory epithelium RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site olfactory epithelium RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "olfactory epithelium"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 48 Spliced-read support for olfactory epithelium olfactory epithelium intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "olfactory epithelium"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 47 Annotation generated from olfactory epithelium RNA-seq data olfactory epithelium RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "olfactory epithelium"}, "type": "rnaseq", "zmenu": "RNASeq"} 49 Spliced-read support for olfactory epithelium olfactory epithelium intron-spanning reads 1 \N 30 BWA alignments of olfactory lobe RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site olfactory lobe RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "olfactory lobe"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 32 Spliced-read support for olfactory lobe olfactory lobe intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "olfactory lobe"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 31 Annotation generated from olfactory lobe RNA-seq data olfactory lobe RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "olfactory lobe"}, "type": "rnaseq", "zmenu": "RNASeq"} 33 Spliced-read support for olfactory lobe olfactory lobe intron-spanning reads 1 \N 10 BWA alignments of skeletal muscle RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site skeletal muscle RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "skeletal muscle"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 12 Spliced-read support for skeletal muscle skeletal muscle intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "skeletal muscle"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 11 Annotation generated from skeletal muscle RNA-seq data skeletal muscle RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "skeletal muscle"}, "type": "rnaseq", "zmenu": "RNASeq"} 13 Spliced-read support for skeletal muscle skeletal muscle intron-spanning reads 1 \N 18 BWA alignments of skin RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site skin RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "skin"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 20 Spliced-read support for skin skin intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "skin"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 19 Annotation generated from skin RNA-seq data skin RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "skin"}, "type": "rnaseq", "zmenu": "RNASeq"} 21 Spliced-read support for skin skin intron-spanning reads 1 \N 58 BWA alignments of spleen RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site spleen RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "label_key": "RNASeq [biotype]", "colour_key": "bam", "type": "rnaseq", "matrix": {"group_order": "1", "column": "BAM files", "menu": "rnaseq", "group": "ENA", "row": "spleen"}} 60 Spliced-read support for spleen spleen intron-spanning reads 1 {"zmenu": "Supporting_alignment", "label_key": "", "colour_key": "intron_support", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "group": "ENA", "row": "spleen"}} 59 Annotation generated from spleen RNA-seq data spleen RNA-seq gene models 1 {"zmenu": "RNASeq", "label_key": "RNASeq [biotype]", "colour_key": "human_rnaseq", "type": "rnaseq", "matrix": {"column": "Gene models", "menu": "rnaseq", "group": "ENA", "row": "spleen"}} 61 Spliced-read support for spleen spleen intron-spanning reads 1 \N 42 BWA alignments of testis RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site testis RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "testis"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 44 Spliced-read support for testis testis intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "testis"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 43 Annotation generated from testis RNA-seq data testis RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "testis"}, "type": "rnaseq", "zmenu": "RNASeq"} 45 Spliced-read support for testis testis intron-spanning reads 1 \N 54 BWA alignments of tongue RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site tongue RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "label_key": "RNASeq [biotype]", "colour_key": "bam", "type": "rnaseq", "matrix": {"group_order": "1", "column": "BAM files", "menu": "rnaseq", "group": "ENA", "row": "tongue"}} 56 Spliced-read support for tongue tongue intron-spanning reads 1 {"zmenu": "Supporting_alignment", "label_key": "", "colour_key": "intron_support", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "group": "ENA", "row": "tongue"}} 55 Annotation generated from tongue RNA-seq data tongue RNA-seq gene models 1 {"zmenu": "RNASeq", "label_key": "RNASeq [biotype]", "colour_key": "human_rnaseq", "type": "rnaseq", "matrix": {"column": "Gene models", "menu": "rnaseq", "group": "ENA", "row": "tongue"}} 57 Spliced-read support for tongue tongue intron-spanning reads 1 \N 67 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}}