167 BWA alignments of 14 dpf sample1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site 14 dpf sample1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "14 dpf sample1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 168 Spliced-read support for 14 dpf sample1 14 dpf sample1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "14 dpf sample1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 165 Annotation generated from 14 dpf sample1 RNA-seq data 14 dpf sample1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "14 dpf sample1"}, "type": "rnaseq", "zmenu": "RNASeq"} 166 Spliced-read support for 14 dpf sample1 14 dpf sample1 intron-spanning reads 1 \N 87 BWA alignments of 1 dpf sample1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site 1 dpf sample1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "1 dpf sample1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 88 Spliced-read support for 1 dpf sample1 1 dpf sample1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "1 dpf sample1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 85 Annotation generated from 1 dpf sample1 RNA-seq data 1 dpf sample1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "1 dpf sample1"}, "type": "rnaseq", "zmenu": "RNASeq"} 86 Spliced-read support for 1 dpf sample1 1 dpf sample1 intron-spanning reads 1 \N 47 BWA alignments of 2 dpf sample1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site 2 dpf sample1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "2 dpf sample1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 48 Spliced-read support for 2 dpf sample1 2 dpf sample1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "2 dpf sample1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 45 Annotation generated from 2 dpf sample1 RNA-seq data 2 dpf sample1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "2 dpf sample1"}, "type": "rnaseq", "zmenu": "RNASeq"} 46 Spliced-read support for 2 dpf sample1 2 dpf sample1 intron-spanning reads 1 \N 131 BWA alignments of 3 dpf sample1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site 3 dpf sample1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "3 dpf sample1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 132 Spliced-read support for 3 dpf sample1 3 dpf sample1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "3 dpf sample1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 129 Annotation generated from 3 dpf sample1 RNA-seq data 3 dpf sample1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "3 dpf sample1"}, "type": "rnaseq", "zmenu": "RNASeq"} 130 Spliced-read support for 3 dpf sample1 3 dpf sample1 intron-spanning reads 1 \N 99 BWA alignments of 5 dpf sample1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site 5 dpf sample1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "5 dpf sample1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 100 Spliced-read support for 5 dpf sample1 5 dpf sample1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "5 dpf sample1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 97 Annotation generated from 5 dpf sample1 RNA-seq data 5 dpf sample1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "5 dpf sample1"}, "type": "rnaseq", "zmenu": "RNASeq"} 98 Spliced-read support for 5 dpf sample1 5 dpf sample1 intron-spanning reads 1 \N 103 BWA alignments of blastula 128-cell RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site blastula 128-cell RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "blastula 128-cell"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 104 Spliced-read support for blastula 128-cell blastula 128-cell intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "blastula 128-cell"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 101 Annotation generated from blastula 128-cell RNA-seq data blastula 128-cell RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "blastula 128-cell"}, "type": "rnaseq", "zmenu": "RNASeq"} 102 Spliced-read support for blastula 128-cell blastula 128-cell intron-spanning reads 1 \N 119 BWA alignments of blastula 1k-cell RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site blastula 1k-cell RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "blastula 1k-cell"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 120 Spliced-read support for blastula 1k-cell blastula 1k-cell intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "blastula 1k-cell"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 117 Annotation generated from blastula 1k-cell RNA-seq data blastula 1k-cell RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "blastula 1k-cell"}, "type": "rnaseq", "zmenu": "RNASeq"} 118 Spliced-read support for blastula 1k-cell blastula 1k-cell intron-spanning reads 1 \N 75 BWA alignments of blastula dome RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site blastula dome RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "blastula dome"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 76 Spliced-read support for blastula dome blastula dome intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "blastula dome"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 73 Annotation generated from blastula dome RNA-seq data blastula dome RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "blastula dome"}, "type": "rnaseq", "zmenu": "RNASeq"} 74 Spliced-read support for blastula dome blastula dome intron-spanning reads 1 \N 151 BWA alignments of cleavage 2-cell RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site cleavage 2-cell RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "cleavage 2-cell"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 152 Spliced-read support for cleavage 2-cell cleavage 2-cell intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "cleavage 2-cell"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 149 Annotation generated from cleavage 2-cell RNA-seq data cleavage 2-cell RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "cleavage 2-cell"}, "type": "rnaseq", "zmenu": "RNASeq"} 150 Spliced-read support for cleavage 2-cell cleavage 2-cell intron-spanning reads 1 \N 155 BWA alignments of embryo RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site embryo RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "embryo"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 156 Spliced-read support for embryo embryo intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "embryo"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 153 Annotation generated from embryo RNA-seq data embryo RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "embryo"}, "type": "rnaseq", "zmenu": "RNASeq"} 154 Spliced-read support for embryo embryo intron-spanning reads 1 \N 143 BWA alignments of gastrula 50 -epiboly RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site gastrula 50 -epiboly RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "gastrula 50 -epiboly"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 144 Spliced-read support for gastrula 50 -epiboly gastrula 50 -epiboly intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "gastrula 50 -epiboly"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 141 Annotation generated from gastrula 50 -epiboly RNA-seq data gastrula 50 -epiboly RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "gastrula 50 -epiboly"}, "type": "rnaseq", "zmenu": "RNASeq"} 142 Spliced-read support for gastrula 50 -epiboly gastrula 50 -epiboly intron-spanning reads 1 \N 115 BWA alignments of gastrula 75 -epiboly RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site gastrula 75 -epiboly RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "gastrula 75 -epiboly"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 116 Spliced-read support for gastrula 75 -epiboly gastrula 75 -epiboly intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "gastrula 75 -epiboly"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 113 Annotation generated from gastrula 75 -epiboly RNA-seq data gastrula 75 -epiboly RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "gastrula 75 -epiboly"}, "type": "rnaseq", "zmenu": "RNASeq"} 114 Spliced-read support for gastrula 75 -epiboly gastrula 75 -epiboly intron-spanning reads 1 \N 55 BWA alignments of gastrula shield RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site gastrula shield RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "gastrula shield"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 56 Spliced-read support for gastrula shield gastrula shield intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "gastrula shield"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 53 Annotation generated from gastrula shield RNA-seq data gastrula shield RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "gastrula shield"}, "type": "rnaseq", "zmenu": "RNASeq"} 54 Spliced-read support for gastrula shield gastrula shield intron-spanning reads 1 \N 51 BWA alignments of hatching long pec RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site hatching long pec RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "hatching long pec"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 52 Spliced-read support for hatching long pec hatching long pec intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "hatching long pec"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 49 Annotation generated from hatching long pec RNA-seq data hatching long pec RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "hatching long pec"}, "type": "rnaseq", "zmenu": "RNASeq"} 50 Spliced-read support for hatching long pec hatching long pec intron-spanning reads 1 \N 79 BWA alignments of larval day 4 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site larval day 4 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "larval day 4"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 80 Spliced-read support for larval day 4 larval day 4 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "larval day 4"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 77 Annotation generated from larval day 4 RNA-seq data larval day 4 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "larval day 4"}, "type": "rnaseq", "zmenu": "RNASeq"} 78 Spliced-read support for larval day 4 larval day 4 intron-spanning reads 1 \N 127 BWA alignments of larval day 5 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site larval day 5 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "larval day 5"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 128 Spliced-read support for larval day 5 larval day 5 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "larval day 5"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 125 Annotation generated from larval day 5 RNA-seq data larval day 5 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "larval day 5"}, "type": "rnaseq", "zmenu": "RNASeq"} 126 Spliced-read support for larval day 5 larval day 5 intron-spanning reads 1 \N 111 BWA alignments of larval protruding mouth RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site larval protruding mouth RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "larval protruding mouth"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 112 Spliced-read support for larval protruding mouth larval protruding mouth intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "larval protruding mouth"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 109 Annotation generated from larval protruding mouth RNA-seq data larval protruding mouth RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "larval protruding mouth"}, "type": "rnaseq", "zmenu": "RNASeq"} 110 Spliced-read support for larval protruding mouth larval protruding mouth intron-spanning reads 1 \N 95 BWA alignments of merged RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site merged RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 96 Spliced-read support for merged merged intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 93 Annotation generated from merged RNA-seq data merged RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq"} 94 Spliced-read support for merged merged intron-spanning reads 1 \N 107 BWA alignments of olfactory epithelium RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site olfactory epithelium RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "olfactory epithelium"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 108 Spliced-read support for olfactory epithelium olfactory epithelium intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "olfactory epithelium"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 105 Annotation generated from olfactory epithelium RNA-seq data olfactory epithelium RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "olfactory epithelium"}, "type": "rnaseq", "zmenu": "RNASeq"} 106 Spliced-read support for olfactory epithelium olfactory epithelium intron-spanning reads 1 \N 159 BWA alignments of pharyngula prim-25 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site pharyngula prim-25 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "pharyngula prim-25"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 160 Spliced-read support for pharyngula prim-25 pharyngula prim-25 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "pharyngula prim-25"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 157 Annotation generated from pharyngula prim-25 RNA-seq data pharyngula prim-25 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "pharyngula prim-25"}, "type": "rnaseq", "zmenu": "RNASeq"} 158 Spliced-read support for pharyngula prim-25 pharyngula prim-25 intron-spanning reads 1 \N 163 BWA alignments of pharyngula prim 15 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site pharyngula prim 15 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "pharyngula prim 15"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 164 Spliced-read support for pharyngula prim 15 pharyngula prim 15 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "pharyngula prim 15"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 161 Annotation generated from pharyngula prim 15 RNA-seq data pharyngula prim 15 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "pharyngula prim 15"}, "type": "rnaseq", "zmenu": "RNASeq"} 162 Spliced-read support for pharyngula prim 15 pharyngula prim 15 intron-spanning reads 1 \N 147 BWA alignments of pharyngula prim 5 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site pharyngula prim 5 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "pharyngula prim 5"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 148 Spliced-read support for pharyngula prim 5 pharyngula prim 5 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "pharyngula prim 5"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 145 Annotation generated from pharyngula prim 5 RNA-seq data pharyngula prim 5 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "pharyngula prim 5"}, "type": "rnaseq", "zmenu": "RNASeq"} 146 Spliced-read support for pharyngula prim 5 pharyngula prim 5 intron-spanning reads 1 \N 67 BWA alignments of segmentation 1-4 somites RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site segmentation 1-4 somites RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "segmentation 1-4 somites"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 68 Spliced-read support for segmentation 1-4 somites segmentation 1-4 somites intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "segmentation 1-4 somites"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 65 Annotation generated from segmentation 1-4 somites RNA-seq data segmentation 1-4 somites RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "segmentation 1-4 somites"}, "type": "rnaseq", "zmenu": "RNASeq"} 66 Spliced-read support for segmentation 1-4 somites segmentation 1-4 somites intron-spanning reads 1 \N 71 BWA alignments of segmentation 14-19 somites RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site segmentation 14-19 somites RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "segmentation 14-19 somites"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 72 Spliced-read support for segmentation 14-19 somites segmentation 14-19 somites intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "segmentation 14-19 somites"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 69 Annotation generated from segmentation 14-19 somites RNA-seq data segmentation 14-19 somites RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "segmentation 14-19 somites"}, "type": "rnaseq", "zmenu": "RNASeq"} 70 Spliced-read support for segmentation 14-19 somites segmentation 14-19 somites intron-spanning reads 1 \N 83 BWA alignments of segmentation 20-25 somites RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site segmentation 20-25 somites RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "segmentation 20-25 somites"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 84 Spliced-read support for segmentation 20-25 somites segmentation 20-25 somites intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "segmentation 20-25 somites"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 81 Annotation generated from segmentation 20-25 somites RNA-seq data segmentation 20-25 somites RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "segmentation 20-25 somites"}, "type": "rnaseq", "zmenu": "RNASeq"} 82 Spliced-read support for segmentation 20-25 somites segmentation 20-25 somites intron-spanning reads 1 \N 63 BWA alignments of zf female head sample1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site zf female head sample1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "zf female head sample1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 64 Spliced-read support for zf female head sample1 zf female head sample1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "zf female head sample1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 61 Annotation generated from zf female head sample1 RNA-seq data zf female head sample1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "zf female head sample1"}, "type": "rnaseq", "zmenu": "RNASeq"} 62 Spliced-read support for zf female head sample1 zf female head sample1 intron-spanning reads 1 \N 139 BWA alignments of zf female sample1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site zf female sample1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "zf female sample1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 140 Spliced-read support for zf female sample1 zf female sample1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "zf female sample1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 137 Annotation generated from zf female sample1 RNA-seq data zf female sample1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "zf female sample1"}, "type": "rnaseq", "zmenu": "RNASeq"} 138 Spliced-read support for zf female sample1 zf female sample1 intron-spanning reads 1 \N 59 BWA alignments of zf male head sample1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site zf male head sample1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "zf male head sample1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 60 Spliced-read support for zf male head sample1 zf male head sample1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "zf male head sample1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 57 Annotation generated from zf male head sample1 RNA-seq data zf male head sample1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "zf male head sample1"}, "type": "rnaseq", "zmenu": "RNASeq"} 58 Spliced-read support for zf male head sample1 zf male head sample1 intron-spanning reads 1 \N 123 BWA alignments of zf male sample1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site zf male sample1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "zf male sample1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 124 Spliced-read support for zf male sample1 zf male sample1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "zf male sample1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 121 Annotation generated from zf male sample1 RNA-seq data zf male sample1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "zf male sample1"}, "type": "rnaseq", "zmenu": "RNASeq"} 122 Spliced-read support for zf male sample1 zf male sample1 intron-spanning reads 1 \N 135 BWA alignments of zf ovary sample1 RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site zf ovary sample1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "zf ovary sample1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 136 Spliced-read support for zf ovary sample1 zf ovary sample1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "zf ovary sample1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 133 Annotation generated from zf ovary sample1 RNA-seq data zf ovary sample1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "zf ovary sample1"}, "type": "rnaseq", "zmenu": "RNASeq"} 134 Spliced-read support for zf ovary sample1 zf ovary sample1 intron-spanning reads 1 \N 91 BWA alignments of zygote 1-cell RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site zygote 1-cell RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "zygote 1-cell"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 92 Spliced-read support for zygote 1-cell zygote 1-cell intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "zygote 1-cell"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 89 Annotation generated from zygote 1-cell RNA-seq data zygote 1-cell RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "zygote 1-cell"}, "type": "rnaseq", "zmenu": "RNASeq"} 90 Spliced-read support for zygote 1-cell zygote 1-cell intron-spanning reads 1 \N 44 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}}