22 BWA alignments of female brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female brain RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 24 Spliced-read support for female brain female brain intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 23 Annotation generated from female brain RNA-seq data female brain RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "RNASeq"} 25 Spliced-read support for female brain female brain intron-spanning reads 1 \N 42 BWA alignments of female mixed hypothalamus and ovary RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female mixed hypothalamus and ovary RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female mixed hypothalamus and ovary"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 44 Spliced-read support for female mixed hypothalamus and ovary female mixed hypothalamus and ovary intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female mixed hypothalamus and ovary"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 43 Annotation generated from female mixed hypothalamus and ovary RNA-seq data female mixed hypothalamus and ovary RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female mixed hypothalamus and ovary"}, "type": "rnaseq", "zmenu": "RNASeq"} 45 Spliced-read support for female mixed hypothalamus and ovary female mixed hypothalamus and ovary intron-spanning reads 1 \N 11 BWA alignments of female oviduct RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female oviduct RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female oviduct"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 15 Spliced-read support for female oviduct female oviduct intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female oviduct"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 16 Annotation generated from female oviduct RNA-seq data female oviduct RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female oviduct"}, "type": "rnaseq", "zmenu": "RNASeq"} 17 Spliced-read support for female oviduct female oviduct intron-spanning reads 1 \N 50 BWA alignments of male brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male brain RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male brain"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 53 Spliced-read support for male brain male brain intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male brain"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 52 Annotation generated from male brain RNA-seq data male brain RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male brain"}, "type": "rnaseq", "zmenu": "RNASeq"} 54 Spliced-read support for male brain male brain intron-spanning reads 1 \N 51 BWA alignments of male heart RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male heart RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male heart"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 56 Spliced-read support for male heart male heart intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male heart"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 55 Annotation generated from male heart RNA-seq data male heart RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male heart"}, "type": "rnaseq", "zmenu": "RNASeq"} 57 Spliced-read support for male heart male heart intron-spanning reads 1 \N 38 BWA alignments of male intestine RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male intestine RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male intestine"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 41 Spliced-read support for male intestine male intestine intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male intestine"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 39 Annotation generated from male intestine RNA-seq data male intestine RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male intestine"}, "type": "rnaseq", "zmenu": "RNASeq"} 40 Spliced-read support for male intestine male intestine intron-spanning reads 1 \N 46 BWA alignments of male kidney RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male kidney RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male kidney"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 48 Spliced-read support for male kidney male kidney intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male kidney"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 47 Annotation generated from male kidney RNA-seq data male kidney RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male kidney"}, "type": "rnaseq", "zmenu": "RNASeq"} 49 Spliced-read support for male kidney male kidney intron-spanning reads 1 \N 62 BWA alignments of male liver RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male liver RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male liver"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 65 Spliced-read support for male liver male liver intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male liver"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 63 Annotation generated from male liver RNA-seq data male liver RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male liver"}, "type": "rnaseq", "zmenu": "RNASeq"} 64 Spliced-read support for male liver male liver intron-spanning reads 1 \N 34 BWA alignments of male lung RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male lung RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male lung"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 36 Spliced-read support for male lung male lung intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male lung"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 35 Annotation generated from male lung RNA-seq data male lung RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male lung"}, "type": "rnaseq", "zmenu": "RNASeq"} 37 Spliced-read support for male lung male lung intron-spanning reads 1 \N 27 BWA alignments of male mixed hypothalamus and testis RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male mixed hypothalamus and testis RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male mixed hypothalamus and testis"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 30 Spliced-read support for male mixed hypothalamus and testis male mixed hypothalamus and testis intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male mixed hypothalamus and testis"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 33 Annotation generated from male mixed hypothalamus and testis RNA-seq data male mixed hypothalamus and testis RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male mixed hypothalamus and testis"}, "type": "rnaseq", "zmenu": "RNASeq"} 32 Spliced-read support for male mixed hypothalamus and testis male mixed hypothalamus and testis intron-spanning reads 1 \N 58 BWA alignments of male muscle RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male muscle RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male muscle"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 60 Spliced-read support for male muscle male muscle intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male muscle"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 59 Annotation generated from male muscle RNA-seq data male muscle RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male muscle"}, "type": "rnaseq", "zmenu": "RNASeq"} 61 Spliced-read support for male muscle male muscle intron-spanning reads 1 \N 70 BWA alignments of merged RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site merged RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 72 Spliced-read support for merged merged intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 71 Annotation generated from merged RNA-seq data merged RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq"} 73 Spliced-read support for merged merged intron-spanning reads 1 \N 66 BWA alignments of neuroretina cell RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site neuroretina cell RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "neuroretina cell"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 68 Spliced-read support for neuroretina cell neuroretina cell intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "neuroretina cell"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 67 Annotation generated from neuroretina cell RNA-seq data neuroretina cell RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "neuroretina cell"}, "type": "rnaseq", "zmenu": "RNASeq"} 69 Spliced-read support for neuroretina cell neuroretina cell intron-spanning reads 1 \N 26 BWA alignments of ovary RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site ovary RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "ovary"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 31 Spliced-read support for ovary ovary intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "ovary"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 28 Annotation generated from ovary RNA-seq data ovary RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "ovary"}, "type": "rnaseq", "zmenu": "RNASeq"} 29 Spliced-read support for ovary ovary intron-spanning reads 1 \N 10 BWA alignments of oviduct RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site oviduct RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "oviduct"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 13 Spliced-read support for oviduct oviduct intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "oviduct"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 12 Annotation generated from oviduct RNA-seq data oviduct RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "oviduct"}, "type": "rnaseq", "zmenu": "RNASeq"} 14 Spliced-read support for oviduct oviduct intron-spanning reads 1 \N 18 BWA alignments of testis RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site testis RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "testis"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 20 Spliced-read support for testis testis intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "testis"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 19 Annotation generated from testis RNA-seq data testis RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "testis"}, "type": "rnaseq", "zmenu": "RNASeq"} 21 Spliced-read support for testis testis intron-spanning reads 1 \N 75 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}}