25	BWA alignments of embryos RNA-seq data. This BAM file can be downloaded FROM the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	embryos RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "embryos"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
29	Spliced-read support for embryos	embryos intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "embryos"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
27	Annotation generated FROM embryos RNA-seq data	embryos RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "embryos"}, "type": "rnaseq", "zmenu": "RNASeq"}
28	Spliced-read support for embryos	embryos intron-spanning reads	1	\N
13	BWA alignments of female bones RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	female bones RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female bones"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
14	Spliced-read support for female bones	female bones intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female bones"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
15	Annotation generated from female bones RNA-seq data	female bones RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female bones"}, "type": "rnaseq", "zmenu": "RNASeq"}
16	Spliced-read support for female bones	female bones intron-spanning reads	1	\N
34	BWA alignments of female brain RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	female brain RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
39	Spliced-read support for female brain	female brain intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
40	Annotation generated from female brain RNA-seq data	female brain RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "RNASeq"}
42	Spliced-read support for female brain	female brain intron-spanning reads	1	\N
9	BWA alignments of female gills RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	female gills RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female gills"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
11	Spliced-read support for female gills	female gills intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female gills"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
10	Annotation generated from female gills RNA-seq data	female gills RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female gills"}, "type": "rnaseq", "zmenu": "RNASeq"}
12	Spliced-read support for female gills	female gills intron-spanning reads	1	\N
45	BWA alignments of female gonad RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	female gonad RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female gonad"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
47	Spliced-read support for female gonad	female gonad intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female gonad"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
46	Annotation generated from female gonad RNA-seq data	female gonad RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female gonad"}, "type": "rnaseq", "zmenu": "RNASeq"}
48	Spliced-read support for female gonad	female gonad intron-spanning reads	1	\N
26	BWA alignments of female head kidney RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	female head kidney RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female head kidney"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
30	Spliced-read support for female head kidney	female head kidney intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female head kidney"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
31	Annotation generated from female head kidney RNA-seq data	female head kidney RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female head kidney"}, "type": "rnaseq", "zmenu": "RNASeq"}
32	Spliced-read support for female head kidney	female head kidney intron-spanning reads	1	\N
35	BWA alignments of female heart RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	female heart RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female heart"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
44	Spliced-read support for female heart	female heart intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female heart"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
41	Annotation generated from female heart RNA-seq data	female heart RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female heart"}, "type": "rnaseq", "zmenu": "RNASeq"}
43	Spliced-read support for female heart	female heart intron-spanning reads	1	\N
33	BWA alignments of female intestine RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	female intestine RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female intestine"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
38	Spliced-read support for female intestine	female intestine intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female intestine"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
36	Annotation generated from female intestine RNA-seq data	female intestine RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female intestine"}, "type": "rnaseq", "zmenu": "RNASeq"}
37	Spliced-read support for female intestine	female intestine intron-spanning reads	1	\N
21	BWA alignments of female muscle RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	female muscle RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female muscle"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
23	Spliced-read support for female muscle	female muscle intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female muscle"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
22	Annotation generated from female muscle RNA-seq data	female muscle RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female muscle"}, "type": "rnaseq", "zmenu": "RNASeq"}
24	Spliced-read support for female muscle	female muscle intron-spanning reads	1	\N
49	BWA alignments of female ovary RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	female ovary RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female ovary"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
51	Spliced-read support for female ovary	female ovary intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female ovary"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
50	Annotation generated from female ovary RNA-seq data	female ovary RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female ovary"}, "type": "rnaseq", "zmenu": "RNASeq"}
52	Spliced-read support for female ovary	female ovary intron-spanning reads	1	\N
53	BWA alignments of isolated eye RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	isolated eye RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "isolated eye"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
55	Spliced-read support for isolated eye	isolated eye intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "isolated eye"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
54	Annotation generated from isolated eye RNA-seq data	isolated eye RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "isolated eye"}, "type": "rnaseq", "zmenu": "RNASeq"}
56	Spliced-read support for isolated eye	isolated eye intron-spanning reads	1	\N
17	BWA alignments of male testis RNA-seq data. This BAM file can be downloaded from the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	male testis RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male testis"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
19	Spliced-read support for male testis	male testis intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male testis"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
18	Annotation generated from male testis RNA-seq data	male testis RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male testis"}, "type": "rnaseq", "zmenu": "RNASeq"}
20	Spliced-read support for male testis	male testis intron-spanning reads	1	\N
57	BWA alignments of merged RNA-seq data. This BAM file can be downloaded FROM the <a href="http://ftp.ensembl.org/pub/data_files/">Ensembl FTP site</a>	merged RNA-seq BWA alignments	1	{"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq_bam"}
59	Spliced-read support for merged	merged intron-spanning reads	1	{"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "Supporting_alignment"}
58	Annotation generated FROM merged RNA-seq data	merged RNA-seq gene models	1	{"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq"}
60	Spliced-read support for merged	merged intron-spanning reads	1	\N
62	For various species, proteins from <a rel="external" href="http://www.uniprot.org/">UniProtKB</a> are aligned to the genome with <a rel="external" href="http://genome.cshlp.org/content/14/5/988.abstract?maxtoshow=&amp%3bHITS=10&amp%3bhits=10&amp%3bRESULTFORMAT=&amp%3bandorexactfulltext=and&amp%3bsearchid=1&amp%3bFIRSTINDEX=0&amp%3bsortspec=relevance&amp%3bvolume=14&amp%3bfirstpage=988&amp%3bresourcetype=HWCIT">GeneWise</a>.	Other species proteins	1	{"protein_align_feature": {"do_not_display": "1"}}