13 BWA alignments of female 11kb RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female 11kb RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female 11kb"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 15 Spliced-read support for female 11kb female 11kb intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female 11kb"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 14 Annotation generated from female 11kb RNA-seq data female 11kb RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female 11kb"}, "type": "rnaseq", "zmenu": "RNASeq"} 16 Spliced-read support for female 11kb female 11kb intron-spanning reads 1 \N 29 BWA alignments of female 13kb RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female 13kb RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female 13kb"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 33 Spliced-read support for female 13kb female 13kb intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female 13kb"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 32 Annotation generated from female 13kb RNA-seq data female 13kb RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female 13kb"}, "type": "rnaseq", "zmenu": "RNASeq"} 36 Spliced-read support for female 13kb female 13kb intron-spanning reads 1 \N 25 BWA alignments of female 240 bp RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female 240 bp RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female 240 bp"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 27 Spliced-read support for female 240 bp female 240 bp intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female 240 bp"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 26 Annotation generated from female 240 bp RNA-seq data female 240 bp RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female 240 bp"}, "type": "rnaseq", "zmenu": "RNASeq"} 28 Spliced-read support for female 240 bp female 240 bp intron-spanning reads 1 \N 9 BWA alignments of female 2 kb RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female 2 kb RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female 2 kb"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 11 Spliced-read support for female 2 kb female 2 kb intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female 2 kb"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 10 Annotation generated from female 2 kb RNA-seq data female 2 kb RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female 2 kb"}, "type": "rnaseq", "zmenu": "RNASeq"} 12 Spliced-read support for female 2 kb female 2 kb intron-spanning reads 1 \N 17 BWA alignments of female 3 kb RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female 3 kb RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female 3 kb"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 19 Spliced-read support for female 3 kb female 3 kb intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female 3 kb"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 18 Annotation generated from female 3 kb RNA-seq data female 3 kb RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female 3 kb"}, "type": "rnaseq", "zmenu": "RNASeq"} 20 Spliced-read support for female 3 kb female 3 kb intron-spanning reads 1 \N 30 BWA alignments of female 420 bp RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female 420 bp RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female 420 bp"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 34 Spliced-read support for female 420 bp female 420 bp intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female 420 bp"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 35 Annotation generated from female 420 bp RNA-seq data female 420 bp RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female 420 bp"}, "type": "rnaseq", "zmenu": "RNASeq"} 39 Spliced-read support for female 420 bp female 420 bp intron-spanning reads 1 \N 31 BWA alignments of female 4 kb RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female 4 kb RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female 4 kb"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 37 Spliced-read support for female 4 kb female 4 kb intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female 4 kb"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 38 Annotation generated from female 4 kb RNA-seq data female 4 kb RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female 4 kb"}, "type": "rnaseq", "zmenu": "RNASeq"} 40 Spliced-read support for female 4 kb female 4 kb intron-spanning reads 1 \N 45 BWA alignments of female 7kb RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female 7kb RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female 7kb"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 47 Spliced-read support for female 7kb female 7kb intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female 7kb"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 46 Annotation generated from female 7kb RNA-seq data female 7kb RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female 7kb"}, "type": "rnaseq", "zmenu": "RNASeq"} 48 Spliced-read support for female 7kb female 7kb intron-spanning reads 1 \N 21 BWA alignments of female 800 bp RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female 800 bp RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female 800 bp"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 23 Spliced-read support for female 800 bp female 800 bp intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female 800 bp"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 22 Annotation generated from female 800 bp RNA-seq data female 800 bp RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female 800 bp"}, "type": "rnaseq", "zmenu": "RNASeq"} 24 Spliced-read support for female 800 bp female 800 bp intron-spanning reads 1 \N 41 BWA alignments of female 9kb RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female 9kb RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female 9kb"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 43 Spliced-read support for female 9kb female 9kb intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female 9kb"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 42 Annotation generated from female 9kb RNA-seq data female 9kb RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female 9kb"}, "type": "rnaseq", "zmenu": "RNASeq"} 44 Spliced-read support for female 9kb female 9kb intron-spanning reads 1 \N 57 BWA alignments of female blood RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female blood RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female blood"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 59 Spliced-read support for female blood female blood intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female blood"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 58 Annotation generated from female blood RNA-seq data female blood RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female blood"}, "type": "rnaseq", "zmenu": "RNASeq"} 60 Spliced-read support for female blood female blood intron-spanning reads 1 \N 49 BWA alignments of female kiwi at5 300bp RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female kiwi at5 300bp RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female kiwi at5 300bp"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 51 Spliced-read support for female kiwi at5 300bp female kiwi at5 300bp intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female kiwi at5 300bp"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 50 Annotation generated from female kiwi at5 300bp RNA-seq data female kiwi at5 300bp RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female kiwi at5 300bp"}, "type": "rnaseq", "zmenu": "RNASeq"} 52 Spliced-read support for female kiwi at5 300bp female kiwi at5 300bp intron-spanning reads 1 \N 53 BWA alignments of male blood RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site male blood RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male blood"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 55 Spliced-read support for male blood male blood intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male blood"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 54 Annotation generated from male blood RNA-seq data male blood RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male blood"}, "type": "rnaseq", "zmenu": "RNASeq"} 56 Spliced-read support for male blood male blood intron-spanning reads 1 \N 61 BWA alignments of merged RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site merged RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 63 Spliced-read support for merged merged intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 62 Annotation generated from merged RNA-seq data merged RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq"} 64 Spliced-read support for merged merged intron-spanning reads 1 \N 66 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}}