57 BWA alignments of adult RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site adult RNA-seq BWA alignments 1 {"matrix": {"row": "adult", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 59 Spliced-read support for adult adult intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "adult", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 58 Annotation generated from adult RNA-seq data adult RNA-seq gene models 1 {"matrix": {"row": "adult", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 60 Spliced-read support for adult adult intron-spanning reads 1 \N 69 BWA alignments of blood RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site blood RNA-seq BWA alignments 1 {"matrix": {"row": "blood", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 71 Spliced-read support for blood blood intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "blood", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 70 Annotation generated from blood RNA-seq data blood RNA-seq gene models 1 {"matrix": {"row": "blood", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 72 Spliced-read support for blood blood intron-spanning reads 1 \N 65 BWA alignments of bone marrow RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site bone marrow RNA-seq BWA alignments 1 {"matrix": {"row": "bone marrow", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 67 Spliced-read support for bone marrow bone marrow intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "bone marrow", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 66 Annotation generated from bone marrow RNA-seq data bone marrow RNA-seq gene models 1 {"matrix": {"row": "bone marrow", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 68 Spliced-read support for bone marrow bone marrow intron-spanning reads 1 \N 41 BWA alignments of brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site brain RNA-seq BWA alignments 1 {"matrix": {"row": "brain", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 43 Spliced-read support for brain brain intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "brain", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 42 Annotation generated from brain RNA-seq data brain RNA-seq gene models 1 {"matrix": {"row": "brain", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 44 Spliced-read support for brain brain intron-spanning reads 1 \N 31 BWA alignments of liver RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site liver RNA-seq BWA alignments 1 {"matrix": {"row": "liver", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 35 Spliced-read support for liver liver intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "liver", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 34 Annotation generated from liver RNA-seq data liver RNA-seq gene models 1 {"matrix": {"row": "liver", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 36 Spliced-read support for liver liver intron-spanning reads 1 \N 73 BWA alignments of merged RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site merged RNA-seq BWA alignments 1 {"matrix": {"row": "merged", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 76 Spliced-read support for merged merged intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "merged", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 74 Annotation generated from merged RNA-seq data merged RNA-seq gene models 1 {"matrix": {"row": "merged", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 77 Spliced-read support for merged merged intron-spanning reads 1 \N 61 BWA alignments of newborn RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site newborn RNA-seq BWA alignments 1 {"matrix": {"row": "newborn", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 63 Spliced-read support for newborn newborn intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "newborn", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 62 Annotation generated from newborn RNA-seq data newborn RNA-seq gene models 1 {"matrix": {"row": "newborn", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 64 Spliced-read support for newborn newborn intron-spanning reads 1 \N 13 BWA alignments of ovary RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site ovary RNA-seq BWA alignments 1 {"matrix": {"row": "ovary", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 16 Spliced-read support for ovary ovary intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "ovary", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 15 Annotation generated from ovary RNA-seq data ovary RNA-seq gene models 1 {"matrix": {"row": "ovary", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 17 Spliced-read support for ovary ovary intron-spanning reads 1 \N 29 BWA alignments of pallium RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site pallium RNA-seq BWA alignments 1 {"matrix": {"row": "pallium", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 32 Spliced-read support for pallium pallium intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "pallium", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 30 Annotation generated from pallium RNA-seq data pallium RNA-seq gene models 1 {"matrix": {"row": "pallium", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 33 Spliced-read support for pallium pallium intron-spanning reads 1 \N 25 BWA alignments of pancreas RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site pancreas RNA-seq BWA alignments 1 {"matrix": {"row": "pancreas", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 27 Spliced-read support for pancreas pancreas intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "pancreas", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 26 Annotation generated from pancreas RNA-seq data pancreas RNA-seq gene models 1 {"matrix": {"row": "pancreas", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 28 Spliced-read support for pancreas pancreas intron-spanning reads 1 \N 45 BWA alignments of pituitary RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site pituitary RNA-seq BWA alignments 1 {"matrix": {"row": "pituitary", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 47 Spliced-read support for pituitary pituitary intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "pituitary", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 46 Annotation generated from pituitary RNA-seq data pituitary RNA-seq gene models 1 {"matrix": {"row": "pituitary", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 48 Spliced-read support for pituitary pituitary intron-spanning reads 1 \N 9 BWA alignments of skeletal muscle RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site skeletal muscle RNA-seq BWA alignments 1 {"matrix": {"row": "skeletal muscle", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 11 Spliced-read support for skeletal muscle skeletal muscle intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "skeletal muscle", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 10 Annotation generated from skeletal muscle RNA-seq data skeletal muscle RNA-seq gene models 1 {"matrix": {"row": "skeletal muscle", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 12 Spliced-read support for skeletal muscle skeletal muscle intron-spanning reads 1 \N 37 BWA alignments of skin RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site skin RNA-seq BWA alignments 1 {"matrix": {"row": "skin", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 39 Spliced-read support for skin skin intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "skin", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 38 Annotation generated from skin RNA-seq data skin RNA-seq gene models 1 {"matrix": {"row": "skin", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 40 Spliced-read support for skin skin intron-spanning reads 1 \N 49 BWA alignments of small intestine RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site small intestine RNA-seq BWA alignments 1 {"matrix": {"row": "small intestine", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 51 Spliced-read support for small intestine small intestine intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "small intestine", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 50 Annotation generated from small intestine RNA-seq data small intestine RNA-seq gene models 1 {"matrix": {"row": "small intestine", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 52 Spliced-read support for small intestine small intestine intron-spanning reads 1 \N 21 BWA alignments of stomach RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site stomach RNA-seq BWA alignments 1 {"matrix": {"row": "stomach", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 23 Spliced-read support for stomach stomach intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "stomach", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 22 Annotation generated from stomach RNA-seq data stomach RNA-seq gene models 1 {"matrix": {"row": "stomach", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 24 Spliced-read support for stomach stomach intron-spanning reads 1 \N 53 BWA alignments of testis RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site testis RNA-seq BWA alignments 1 {"matrix": {"row": "testis", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 55 Spliced-read support for testis testis intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "testis", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 54 Annotation generated from testis RNA-seq data testis RNA-seq gene models 1 {"matrix": {"row": "testis", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 56 Spliced-read support for testis testis intron-spanning reads 1 \N 14 BWA alignments of tongue RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site tongue RNA-seq BWA alignments 1 {"matrix": {"row": "tongue", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 19 Spliced-read support for tongue tongue intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "tongue", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 18 Annotation generated from tongue RNA-seq data tongue RNA-seq gene models 1 {"matrix": {"row": "tongue", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 20 Spliced-read support for tongue tongue intron-spanning reads 1 \N 78 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}}