The following are taxanomy identififer updates (current_tax_id|current_name|previous_tax_id|previous_name): 1172985|Jingmen tick virus|1491393|Jingmen tick virus The following are organism name updates (current_tax_id|current_name|previous_tax_id|previous_name): 260718|Phyllanthus acidus|260718|Cicca acida 2876082|Phyllobacterium chamaecytisi|2876082|Phyllobacterium sp. KW56 2873700|Robertkochia aurantiaca|2873700|Robertkochia sp. 3YJGBD-33 118562|Limnospira platensis|118562|Arthrospira platensis 3117401|Alteromonas sp. S015|3117401|Alteromonas sp. F363 3348343|Paenibacillus nanchangensis|3348343|Paenibacillus sp. CN-4 3080561|Terasakiella sp. FCG-A23|3080561|Terasakiella sp. A23 2126012|Caenibius fulvus|2126012|Altererythrobacter fulvus 3051180|Streptomyces zaehneri|3051180|Streptomyces sp. DSM 40713 3115291|Pseudalkalibacillus nanhaiensis|3115291|Pseudalkalibacillus sp. SCS-8 3059078|Marivirga salinae|3059078|Marivirga salinarum 3064349|Pseudomonas alabamensis|3064349|Pseudomonas sp. 22-AL-CL-001 3153754|Microbacterium chionoecetis|3153754|Microbacterium sp. ProA8 3140241|Fodinibius alkaliphilus|3140241|Fodinibius sp. N2 211787|Human papillomavirus 92|211787|Human papillomavirus type 92 3118054|Pseudoalteromonas pernae|3118054|Pseudoalteromonas sp. YIC-656 3407671|Maribacter luteocoastalis|3407671|Maribacter sp. CXY002 573489|Frankia sp. Ag45/Mut15|573489|Frankia umida 3117402|Alteromonas sp. S167|3117402|Alteromonas sp. F394 1633643|Candidatus Chryseopegocella kryptomonas|1633643|Candidatus Chrysopegis kryptomonas 2796469|Mycobacterium sp. Y57|2796469|Mycolicibacterium xanthum 262543|Exiguobacterium artemiae 255-15|262543|Exiguobacterium sibiricum 255-15 3158558|Sulfitobacter marinivivus|3158558|Sulfitobacter sp. HNIBRBA3233 588897|Streptomyces soliscabiei|588897|Streptomyces sp. NY05-11A 3240933|Chryseobacterium tongliaoense|3240933|Chryseobacterium sp. MD-1 2820809|Streptomyces sp. RG38|2820809|Streptomyces tagetis 3376063|Roseovarius salis|3376063|Roseovarius sp. SYSU LYC5162 3140248|Microbacterium phosphatis|3140248|Microbacterium sp. 9H2 3888|Lathyrus oleraceus|3888|Pisum sativum 3057165|Massilia pseudoviolaceinigra|3057165|Massilia sp. CCM 9206 1664265|Candidatus Bandiella euplotis|1664265|Candidatus Bandiella woodruffii 3131937|Hydrocurvibacter sulfurireducens|3131937|Sulfurimonas sp. HSL-1716 2978479|Roseovarius salincola|2978479|Roseovarius sp. EGI FJ00037 46228|Ruminococcus lactaris|46228|[Ruminococcus] lactaris 3115297|Peribacillus sedimenti|3115297|Peribacillus sp. SCS-155 2976768|Seonamhaeicola sp. MEBiC01930|2976768|Seonamhaeicola sp. MEBiC1930 555317|Phyllobacterium meliloti|555317|Phyllobacterium sp. T1293 1160784|Candidatus Nasuia deltocephalincola|1160784|Candidatus Nasuia deltocephalinicola 1608482|Herpailurus yagouaroundi|1608482|Puma yagouaroundi 174164|Anemonastrum flaccidum|174164|Anemone flaccida 3161188|Streptococcus handemini|3161188|Streptococcus sp. ZJ93 3417572|Carboxylicivirga caseinilyticus|3417572|Carboxylicivirga sp. A049 673178|Pseudoselenophoma australiensis|673178|Selenophoma australiensis 2996458|Streptomyces antarcticus|2996458|Streptomyces sp. H27-S2 3115295|Paraperibacillus marinus|3115295|Peribacillus sp. SCS-26 1172985|Jingmen tick virus|1172985|Mogiana tick virus 1679753|Streptomyces maremycinicus|1679753|Streptomyces sp. NBRC 110468 2182432|Sediminicurvatus halobius|2182432|Spiribacter halobius 3376060|Roseovarius halophilus (ex Wu et al. 2025)|3376060|Roseovarius sp. SYSU LYC5161 2638829|unclassified Candidatus Neoarthromitus|2638829|unclassified Candidatus Arthromitus 3092550|Ewingella allii|3092550|Ewingella sp. 20WA0182 3395467|Macrococcus animalis|3395467|Macrococcus sp. EM39E 2894755|Thiomicrolovo sulfuroxydans|2894755|Sulfurimonas sp. HSL-3221 3367728|Lysobacter claricitrinus|3367728|Lysobacter sp. PAGU 2638 3115294|Rossellomorea sedimentorum|3115294|Bacillus sp. SCS-153A 756|Alitibacter langaaensis|756|Pasteurella langaaensis 2939269|[Mycobacterium] appelbergii|2939269|Mycobacterium sp. 21AC1 3404798|Knoellia tibetensis|3404798|Knoellia sp. CPCC 206450 1524463|Rhodanobacter sp. FW106-PBR-LB-2-11|1524463|Rhodanobacter sp. FW510-T8 2920937|Streptomyces gilvus|2920937|Streptomyces sp. CME 23 3344827|Methylobacterium carpenticola|3344827|Methylobacterium sp. ID0610 3413379|Curtobacterium phyllosphaerae|3413379|Curtobacterium sp. RRHDQ10 3400999|Algibacter ulvanivorans|3400999|Algibacter sp. PT7-4 1122935|Alitibacter langaaensis DSM 22999|1122935|Pasteurella langaaensis DSM 22999 1397666|Candidatus Micropelagius thuwalensis|1397666|Candidatus Micropelagos thuwalensis 1651774|Candidatus Neptunichlamydia vexilliferae|1651774|Candidatus Neptunochlamydia vexilliferae 1491775|Proteinivoracaceae|1491775|Proteinivoraceae 2744473|Qipengyuania atrilutea|2744473|Actirhodobacter atriluteus 2720021|Streptomyces sp. AA8|2720021|Streptomyces telluris 2709400|Streptococcus tangpeifui|2709400|Streptococcus sp. ZJ1593 3051179|Streptomyces kutzneri|3051179|Streptomyces sp. DSM 40907 3153752|Agrococcus chionoecetis|3153752|Agrococcus sp. ProA11 3413380|Curtobacterium guangdongense|3413380|Curtobacterium sp. RRHDQ66 3051178|Streptomyces winkii|3051178|Streptomyces sp. DSM 40971 3376284|Kocuria rhizosphaericola|3376284|Kocuria sp. M4R2S49 433935|Strombocarpa tamarugo|433935|Prosopis tamarugo 310297|Bacteroides plebeius|310297|Phocaeicola plebeius 2016437|Cucurbitinus ibericus|2016437|Cirrenalia iberica 2837955|Brucella amazoniensis|2837955|Brucella sp. BRSO-2020-213 3110225|Parapedobacter flavus|3110225|Parapedobacter sp. 10938 3158560|Agromyces chitinivorans|3158560|Agromyces sp. SYSU T00194 201311|Garrulax ocellatus|201311|Ianthocincla ocellata 1223536|Skermania pinensis NBRC 15059|1223536|Skermania piniformis NBRC 15059 290|Afipia carboxydohydrogena|290|[Pseudomonas] carboxydohydrogena 86183|Xanthomonas boreopolis|86183|[Pseudomonas] boreopolis 3342799|Herbiconiux liukaitaii|3342799|Herbiconiux sp. P15 3377112|Flavisericum labens|3377112|Jejuia sp. DST062 1392998|Candidatus Methanoperedens nitratireducens|1392998|Candidatus Methanoperedens nitroreducens 1458461|Candidatus Phaeomarinibacter ectocarpi|1458461|Candidatus Phaeomarinobacter ectocarpi 3376283|Kocuria kalidii|3376283|Kocuria sp. M4R5S9 3228750|Flagellimonas cixiensis|3228750|Flagellimonas sp. GZD32 3115293|Nanhaiella sioensis|3115293|Bacillus sp. SCS-151 3115614|Anaerococcus kampingae|3115614|Anaerococcus kampingiae 3161189|Streptococcus jiangjianxini|3161189|Streptococcus sp. ZJ151 3131935|Thiomicrolovo immobilis|3131935|Sulfurimonas sp. HSL1-6 3378099|Providencia lanzhouensis|3378099|Providencia sp. PAZ2 1632018|Pampinifervens diazotrophicum|1632018|Hydrogenobacter sp. T-2 3051177|Streptomyces stackebrandtii|3051177|Streptomyces sp. DSM 40976 3252902|Sulfitobacter sediminivivens|3252902|Sulfitobacter sp. MF3-043 100158|Ormosia formosana (in: eudicots)|100158|Ormosia formosana 1986204|Candidatus Brevifilum fermentans|1986204|Brevefilum fermentans 3055079|Stenotrophomonas tuberculopleuritidis|3055079|Stenotrophomonas sp. 704A1 2711215|Stakelama tenebrarum|2711215|Sphingosinithalassobacter tenebrarum 3051181|Streptomyces kroppenstedtii|3051181|Streptomyces sp. DSM 40484 2878685|Proluteimonas luteida|2878685|Luteimonas sp. BDR2-5 3242486|Fibrella arboris|3242486|Fibrella sp. Tmos10 3417568|Eudoraea algarum|3417568|Spongiimicrobium sp. 2-473A-2-J 2490420|Troglonectes shuilongensis|2490420|Oreonectes shuilongensis 172088|Bradyrhizobium sp. th-b2|172088|Bradyrhizobium sp. th.b2 869211|Winmispira thermophila DSM 6578|869211|Spirochaeta thermophila DSM 6578 3404795|Knoellia alttitudinis|3404795|Knoellia sp. CPCC 206391 3417570|Carboxylicivirga agarovorans|3417570|Carboxylicivirga sp. RSCT41 2816963|Carboxylicivirga litoralis|2816963|Carboxylicivirga sp. A043 2802053|Candidatus Methylomicrobium oryzae|2802053|Methylomicrobium sp. RS1 3245086|Mytella strigata|3245086|Musculus strigatus 3144416|Cedecea selenatireducens|3144416|Cedecea sp. S5-13 2032627|Fodinibius salipaludis|2032627|Aliifodinibius salipaludis 3177515|Flagellimonas alginolytica|3177515|Flagellimonas sp. C4 126673|Mycobacterium doricum|126673|Mycolicibacterium doricum 3130163|Brachymonas wangyanguii|3130163|Brachymonas sp. G13 310298|Bacteroides coprocola|310298|Phocaeicola coprocola 2684615|Petchia siamensis (nom. inval.)|2684615|[Petchia] siamensis 3344659|Saccharicrinis sp. FJH65|3344659|Saccharicrinis sp. FJH2 3117399|Alteromonas sp. P256|3117399|Alteromonas sp. F260 3133977|Phycobacter sedimenti|3133977|Phycobacter sp. K97 340071|Candidatus Criblamydia sequanensis|340071|Criblamydia sequanensis 706562|Lactobacillus rogosae|706562|[Lactobacillus] rogosae 2851566|Catellatospora sp. NEAU-YM18|2851566|Catellatospora tritici 3077330|Paenibacillus hubeiensis|3077330|Paenibacillus sp. ES5-4 411923|Moorella perchloratireducens (nom. illeg.)|411923|Moorella perchloratireducens 3152295|Rheinheimera fenheensis|3152295|Rheinheimera sp. FR7-31 134601|Mycobacterium goodii|134601|Mycolicibacterium goodii 1157708|Variovorax atrisoli 110B|1157708|Variovorax paradoxus 110B 1162282|Rhodanobacter sp. FW021-MT20|1162282|Rhodanobacter sp. 115 47742|Lathyrus oleraceus subsp. biflorus|47742|Pisum sativum subsp. elatius 168573|Acer heldreichii subsp. trautvetteri|168573|Acer trautvetteri 3400273|Nitrincola salilacus|3400273|Nitrincola sp. MINF-07-Sa-05 1397698|Exiguobacterium artemiae 7-3|1397698|Exiguobacterium sibiricum 7-3 1121960|Halomonas zhanjiangensis|1121960|Vreelandella zhanjiangensis 3139421|Guyparkeria halopsychrophila|3139421|Guyparkeria sp. LHSS19-1 2905831|Pseudonocardia sp. RS11V-5|2905831|Pseudonocardia terrae 165179|Prevotella copri|165179|Segatella copri 102697|Neltuma glandulosa|102697|Prosopis glandulosa 3351347|Leisingera coralii|3351347|Leisingera sp. D0M16 2726743|Crystallibacter degradans|2726743|Arthrobacter sp. SF27 3050197|Corynebacterium rhinophilum|3050197|Corynebacterium sp. MSK072 519228|Cardiocephala trigonospora|519228|[Phialocephala] trigonospora 3350403|Clostridium caseinilyticum|3350403|Clostridium sp. FAM 1755 3112552|Chlamydia vaughanii|3112552|Chlamydia sp. BM-2023 3158561|Agromyces litoreus|3158561|Agromyces sp. SYSU T0242 3389797|Rahnella selenatireducens|3389797|Rahnella sp. S5-11 3378588|Campylobacter canis|3378588|Campylobacter sp. MOP7 3404796|Knoellia pratensis|3404796|Knoellia sp. CPCC 206453 1437425|Candidatus Criblamydia sequanensis CRIB-18|1437425|Criblamydia sequanensis CRIB-18 32016|Cupidesulfovibrio oxamicus|32016|Nitratidesulfovibrio oxamicus 3126503|Gymnodinialimonas mytili|3126503|Gymnodinialimonas sp. 2305UL16-5 247269|human papillomavirus 96|247269|Human papillomavirus type 96 2779529|Verticiella alkaliphila|2779529|Verticiella sp. GG226 3395462|Macrococcus equi|3395462|Macrococcus sp. 18KM445 207710|Neltuma alba|207710|Prosopis alba 3126508|Gymnodinialimonas hymeniacidonis|3126508|Gymnodinialimonas sp. 202GB13-11 2984864|Streptomyces marinisediminis|2984864|Streptomyces sp. JHD 1 2755585|Stieleria mannarensis|2755585|Rhodopirellula sp. JC639 3345148|Devosia polycyclovorans|3345148|Devosia sp. Naph2 3014036|Tenumembrana ceylonica|3014036|Periplaneta ceylonica 3098603|Novilysobacter longmucuonensis|3098603|Lysobacter sp. D1-1-M9 3158557|Sulfitobacter aquimarinus|3158557|Sulfitobacter sp. HNIBRBA2951 37928|Crystallibacter crystallopoietes|37928|Arthrobacter crystallopoietes 1136799|Schistura callichroma|1136799|Schistura callichromus 3242485|Fibrella musci|3242485|Fibrella sp. WM1 3390035|Zhengella sedimenti|3390035|Zhengella sp. ZM62 3119828|Pelagibacterium mangrovi|3119828|Pelagibacterium sp. WS-203 3134029|Carboxylicivirga longa|3134029|Carboxylicivirga sp. N1E11 1312723|Abutilon golden mosaic virus|1312723|Abutilon golden mosaic Yucatan virus 2307010|Candidatus Galacturonatibacter soehngenii|2307010|Candidatus Galacturonibacter soehngenii 520168|Garrulax cineraceus|520168|Ianthocincla cineracea 713887|Candidatus Atelocyanobacterium thalassae|713887|Candidatus Atelocyanobacterium thalassa 1898749|Candidatus Nitrosomarinus catalinensis|1898749|Candidatus Nitrosomarinus catalina 2597518|Venatorbacter sp. C2-1|2597518|Thalassolituus sp. C2-1 3390813|Alteromonas nitratireducens|3390813|Alteromonas sp. CYL-A6 3126504|Gymnodinialimonas ulvae|3126504|Gymnodinialimonas sp. 2307UL20-7 3404797|Knoellia terrae|3404797|Knoellia sp. CPCC 206435 3375356|Desulfitobacterium nosdiversum|3375356|Desulfitobacterium sp. Sab5 39122|Skermania pinensis|39122|Skermania piniformis 3036443|Streptococcus taoyuanensis|3036443|Streptococcus sp. ST2 1179155|Candidatus Photodesmus blepharonis|1179155|Candidatus Photodesmus blepharus 2878684|Alterluteimonas muca|2878684|Luteimonas sp. MHLX1A 3106030|Aurantibrevibacter litoralis|3106030|Arenibacter sp. GZD-96 3384452|Pseudidiomarina salilacus|3384452|Pseudidiomarina sp. YC-516-91 86105|Candidatus Jidaibacter acanthamoebae|86105|Candidatus Jidaibacter acanthamoeba 1439888|Sandarakinorhabdus fusca|1439888|Polymorphobacter fuscus 154|Winmispira thermophila|154|Spirochaeta thermophila 3342795|Herbiconiux liangxiaofengii|3342795|Herbiconiux sp. P13 1632019|Pampinifervens florentissimum|1632019|Hydrogenobacter sp. T-8 3342794|Herbiconiux wuyangfengii|3342794|Herbiconiux sp. P16 3242487|Fibrella aquatica|3242487|Fibrella sp. GW2-5 204516|Bacteroides massiliensis|204516|Phocaeicola massiliensis 45851|Butyrivibrio crossotus|45851|Eshraghiella crossota 3064385|Aurantiacibacter poecillastricola|3064385|Aurantiacibacter sp. 219JJ12-13 3131933|Thiomicrolovo zhangzhouensis|3131933|Sulfurimonas sp. HSL1-2 2875708|Phyllobacterium lublinensis|2875708|Phyllobacterium sp. 2063 2615207|Plantimonas leprariae|2615207|Aureimonas leprariae 3406573|Streptomyces tritrimontium|3406573|Streptomyces sp. 2.9 2878854|Mesoplasma whartonense|2878854|Mesoplasma sp. JKS002660 3417571|Carboxylicivirga fragile|3417571|Carboxylicivirga sp. N1Y90 3117398|Polaribacter sp. P097|3117398|Polaribacter sp. F158 2518605|Prevotella hominis|2518605|Segatella hominis 3118588|Ewingella docleensis|3118588|Ewingella sp. CoE-038-23 2676234|Stakelama portus|2676234|Sphingosinithalassobacter portus 3394203|Variovorax atrisoli|3394203|Variovorax sp. tm 3079856|Ovoidimarina sediminis|3079856|Rhodophyticola sp. MJ-SS7 3093670|Moorella naiadis (nom. illeg.)|3093670|Moorella naiadis 118138|Cobitis delicata|118138|Niwaella delicata 821|Bacteroides vulgatus|821|Phocaeicola vulgatus 2767824|Glacieibacterium hiemis|2767824|Chioneia hiemis 3077331|Rossellomorea yichunensis|3077331|Rossellomorea sp. YC4-1 3064277|Candidatus Neptunichlamydia sp. REUL1|3064277|Candidatus Neptunochlamydia sp. REUL1 1400860|Candidatus Contendibacter odensensis|1400860|Candidatus Contendobacter odensis 198035|[Pisum sativum] subsp. abyssinicum|198035|Pisum abyssinicum 3376285|Kocuria rhizosphaerae|3376285|Kocuria sp. M1R5S2 3137731|Tolypothrix sp. VBCCA 56010|3137731|Hassallia sp. VBCCA 56010 2563600|Candidatus Nitrosocosmicus agrestis|2563600|Candidatus Nitrosocosmicus sp. SS 3384765|Gillisia xinjiangensis|3384765|Gillisia sp. Q332 3377111|Shewanella mytili|3377111|Shewanella sp. YIC-542 3379885|Streptomyces lacaronensis|3379885|Streptomyces sp. OE57 82654|Thalassoporum mexicanum PCC 7367|82654|Pseudanabaena sp. PCC 7367 2086583|Anaeromassilibacillus sp. Marseille-P3876|2086583|Pseudoruminococcus massiliensis 3131936|Hydrocurvibacter mobilis|3131936|Sulfurimonas sp. HSL3-2 3057166|Massilia scottii|3057166|Massilia sp. CCM 9029 2814576|Halocatena halophila|2814576|Actinarchaeum halophilum 689475|Albulina orbitula|689475|Agriades orbitulus 2914829|Idiomarina aminovorans|2914829|Idiomarina sp. ATCH4 3142973|Thermohahella caldifontis|3142973|Hahella sp. SMD15-11 2992041|Legionella sheltonii|2992041|Legionella sp. PATHC038 459658|Streptomyces malaysiensis subsp. samsunensis|459658|Streptomyces samsunensis 3117012|Neptunicella plasticusilytica|3117012|Neptunicella sp. SCSIO 80796 73230|[Emmonsia] crescens|73230|Emmonsia crescens 3028708|Streptomyces echiniscabiei|3028708|Streptomyces sp. WI04-05B 3098602|Novilysobacter viscosus|3098602|Lysobacter sp. A3-1-A15 1614636|Sandarakinorhabdus glacialis|1614636|Polymorphobacter glacialis 36975|Validiblatta australasiae|36975|Periplaneta australasiae 1920990|Candidatus Fokinia crypta|1920990|Candidatus Fokinia cryptica 1938888|Crystallibacter permensis|1938888|Arthrobacter sp. VKM Ac-2550 3228789|Alicycliphilus soli|3228789|Oryzisolibacter sp. LB2S 3237239|Streptococcus huangxiaojuni|3237239|Streptococcus sp. H31 3131934|Thiomicrolovo subterrani|3131934|Sulfurimonas sp. HSL-1656 2835787|Glacieibacterium megasporae|2835787|Polymorphobacter megasporae 2708345|Planococcus alpniumensis|2708345|Planococcus sp. MSAK28401 2767822|Glacieibacterium brumae|2767822|Chioneia brumae 2975056|Govanella unica|2975056|Govania unica 1547|Erysipelatoclostridium ramosum|1547|Thomasclavelia ramosa 676916|Junonia goudotii|676916|Junonia goudoti 3344826|Methylobacterium alsaeris|3344826|Methylobacterium sp. MA0201 3366579|Aeromonas mytilicola subsp. aquatica|3366579|Aeromonas sp. A-8 3373610|Schlesneria sphaerica|3373610|Schlesneria sp. T3-172 2996459|Massilia antarctica subsp. insulae|2996459|Massilia sp. H27-R4 3155929|Bacillus ayatagriensis|3155929|Bacillus sp. RMG-6 2949650|Parabacteroides caeci|2949650|Parabacteroides sp. W1-Q-101 2766737|Rhodanobacter sp. FW106-PBR-LB-2-19|2766737|Rhodanobacter sp. 1-6 2944586|Maublancomyces americanigigas|2944586|Maublancomyces americanigiga 3131938|Sulfonitrofixus jiaomeiensis|3131938|Sulfurimonas sp. HSL3-7 2904537|Spiroplasma attinicola|2904537|Spiroplasma sp. JKS002670 2511025|Glacieibacterium arshaanense|2511025|Polymorphobacter arshaanensis 2578118|Maribacter algarum (ex Zhang et al. 2020)|2578118|Maribacter algarum 51020|Lathyrus fulvus|51020|Pisum fulvum 1884634|Candidatus Nanopelagicus limnae|1884634|Candidatus Nanopelagicus limnes 3065913|Cupriavidus ulmosensis|3065913|Cupriavidus sp. CV2 665571|Winmispira thermophila DSM 6192|665571|Spirochaeta thermophila DSM 6192 1048809|Oreosalsola abrotanoides|1048809|Salsola abrotanoides 3117400|Alteromonas sp. S005|3117400|Alteromonas sp. F297 3115296|Paraperibacillus esterisolvens|3115296|Peribacillus sp. SCS-37 3158562|Agromyces zhanjiangensis|3158562|Agromyces sp. SYSU T00266 2767819|Glacieibacterium frigoris|2767819|Chioneia frigida 3435883|Lentzea xerophila|3435883|Lentzea sp. E54 2739681|Yaravirus sp. 'brasiliensis'|2739681|Yaravirus brasiliensis 2767825|Glacieibacterium algoris|2767825|Chioneia algoris 3119164|Ferrovibrio plantarum|3119164|Ferrovibrio sp. MS7 3113724|Oryzifoliimicrobium ureilyticus|3113724|Shinella sp. SG148 3115292|Neobacillus oceani|3115292|Neobacillus sp. SCS-31 10616|human papillomavirus 49|10616|Human papillomavirus type 49