Description

The GENCODE project aims to provide the annotation of all evidence-based gene features in the human and mouse genomes at a high accuracy, including protein-coding loci with alternatively splices variants, non-coding loci and pseudogenes.

This track hub displays the following GENCODE annotation releases:

• Human
• GRCh38/hg38: 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48
• GRCh37/hg19: 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19
• Mouse
• GRCm39/mm39: M26, M27, M28, M29, M30, M31, M32, M33, M34, M35, M36, M37
• GRCm38/mm10: M2, M3, M4, M5, M6, M7, M8, M9, M10, M11, M12, M13, M14, M15, M16, M17, M18, M19, M20, M21, M22, M23, M24, M25
• NCBIM37/mm9: M1

For more information, please visit the GENCODE website or contact GENCODE.

References

GENCODE 2025: reference gene annotation for human and mouse.
Mudge JM, Carbonell-Sala S, Diekhans M, Martinez JG, Hunt T, Jungreis I, Loveland JE, Arnan C, Barnes I, Bennett R, Berry A, Bignell A, Cerdán-Vélez D, Cochran K, Cortés LT, Davidson C, Donaldson S, Dursun C, Fatima R, Hardy M, Hebbar P, Hollis Z, James BT, Jiang Y, Johnson R, Kaur G, Kay M, Mangan RJ, Maquedano M, Gómez LM, Mathlouthi N, Merritt R, Ni P, Palumbo E, Perteghella T, Pozo F, Raj S, Sisu C, Steed E, Sumathipala D, Suner MM, Uszczynska-Ratajczak B, Wass E, Yang YT, Zhang D, Finn RD, Gerstein M, Guigó R, Hubbard TJP, Kellis M, Kundaje A, Paten B, Tress ML, Birney E, Martin FJ, Frankish A.
Nucleic Acids Res, Volume 53, Issue D1, 6 January 2025, Pages D966–D975
[PUBMED: 39565199; PMC: PMC11701607; DOI: 10.1093/nar/gkae1078]

Data Release Policy

GENCODE data are available for use without restrictions.