Description

The GENCODE project aims to provide the annotation of all evidence-based gene features in the human and mouse genomes at a high accuracy, including protein-coding loci with alternatively splices variants, non-coding loci and pseudogenes.

This track hub displays the following GENCODE annotation releases:

Human

GRCh38/hg38: 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47
GRCh37/hg19: 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19

Mouse

GRCm39/mm39: M26, M27, M28, M29, M30, M31, M32, M33, M34, M35, M36
GRCm38/mm10: M2, M3, M4, M5, M6, M7, M8, M9, M10, M11, M12, M13, M14, M15, M16, M17, M18, M19, M20, M21, M22, M23, M24, M25
NCBIM37/mm9: M1

For more information, please visit the GENCODE website or contact GENCODE.

References

Frankish A, Carbonell-Sala S, Diekhans M, Jungreis I, Loveland JE, Mudge JM, Sisu C, Wright JC, Arnan C, Barnes I, Banerjee A, Bennett R, Berry A, Bignell A, Boix C, Calvet F, Cerdán-Vélez D, Cunningham F, Davidson C, Donaldson S, Dursun C, Fatima R, Giorgetti S, Giron CG, Gonzalez JM, Hardy M, Harrison PW, Hourlier T, Hollis Z, Hunt T, James B, Jiang Y, Johnson R, Kay M, Lagarde J, Martin FJ, Gómez LM, Nair S, Ni P, Pozo F, Ramalingam V, Ruffier M, Schmitt BM, Schreiber JM, Steed E, Suner MM, Sumathipala D, Sycheva I, Uszczynska-Ratajczak B, Wass E, Yang YT, Yates A, Zafrulla Z, Choudhary JS, Gerstein M, Guigo R, Hubbard TJP, Kellis M, Kundaje A, Paten B, Tress ML, Flicek P.

GENCODE: reference annotation for the human and mouse genomes in 2023. Nucleic Acids Res 2023 : Jan 6 [PUBMED: 36420896; DOI: 10.1093/nar/gkac1071]

Data Release Policy

GENCODE data are available for use without restrictions.