ENST00000473358.1	QC splicing correct
ENST00000473358.1	not best-in-genome evidence
ENST00000469289.1	not best-in-genome evidence
ENST00000461467.1	novel transcript
ENST00000642116.1	ENA ID EGAS00001001486
ENST00000641515.2	ENA ID EGAS00001001486
ENST00000641515.2	MANE_select
ENST00000466430.5	not best-in-genome evidence
ENST00000477740.5	not best-in-genome evidence
ENST00000471248.1	not best-in-genome evidence
ENST00000466557.6	not best-in-genome evidence
ENST00000662089.1	Assembled from SLRseq reads (SRP049776)
ENST00000655252.1	Assembled from SLRseq reads (SRP049776)
ENST00000496488.1	not best-in-genome evidence
ENST00000669836.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000450983.1	QC splicing correct
ENST00000450983.1	not best-in-genome evidence
ENST00000412666.1	QC splicing correct
ENST00000412666.1	not best-in-genome evidence
ENST00000441866.1	not best-in-genome evidence
ENST00000417636.2	QC splicing correct
ENST00000419394.2	QC splicing correct
ENST00000357876.6	QC splicing correct
ENST00000648019.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000440200.5	QC splicing correct
ENST00000440200.5	not best-in-genome evidence
ENST00000441245.5	QC splicing correct
ENST00000423796.1	QC splicing correct
ENST00000423796.1	not best-in-genome evidence
ENST00000450696.1	QC splicing correct
ENST00000450696.1	not best-in-genome evidence
ENST00000506640.2	not best-in-genome evidence
ENST00000416385.1	not best-in-genome evidence
ENST00000422528.1	QC splicing correct
ENST00000422528.1	not best-in-genome evidence
ENST00000655765.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000412115.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670700.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000429505.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657896.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658648.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656571.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665867.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669749.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666217.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665719.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651411.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000609830.1	nested 454 RNA-Seq supported
ENST00000443772.2	Assembled from SLRseq reads (SRP049776)
ENST00000589531.5	NAGNAG splice site
ENST00000655384.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667728.1	Assembled from SLRseq reads (SRP049776)
ENST00000445118.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669922.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669922.1	Assembled from SLRseq reads (SRP049776)
ENST00000670780.1	Assembled from SLRseq reads (SRP049776)
ENST00000667414.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666741.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666741.1	Assembled from SLRseq reads (SRP049776)
ENST00000623070.4	Assembled from SLRseq reads (SRP049776)
ENST00000659124.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659124.1	Assembled from SLRseq reads (SRP049776)
ENST00000658846.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608189.5	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000608189.5	NAGNAG splice site
ENST00000449005.6	Assembled from SLRseq reads (SRP049776)
ENST00000441765.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000609139.6	Assembled from SLRseq reads (SRP049776)
ENST00000609009.6	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000609009.6	NAGNAG splice site
ENST00000657837.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657837.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000610067.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661237.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668541.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657175.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660797.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670824.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671208.1	Assembled from SLRseq reads (SRP049776)
ENST00000661463.1	Assembled from SLRseq reads (SRP049776)
ENST00000616016.5	CAGE supported TSS
ENST00000616016.5	MANE_select
ENST00000618323.5	CAGE supported TSS
ENST00000437963.5	alternative 5' UTR
ENST00000327044.7	DKFZP564C186
ENST00000327044.7	MANE_select
ENST00000483767.5	novel transcript
ENST00000477976.5	novel transcript
ENST00000496938.1	QC splicing correct
ENST00000487214.1	novel transcript
ENST00000469563.1	novel transcript
ENST00000338591.8	MANE_select
ENST00000463212.1	novel transcript
ENST00000466300.1	novel transcript
ENST00000481067.1	putative novel transcript
ENST00000379410.8	DKFZP434H2010
ENST00000379410.8	MANE_select
ENST00000480267.1	novel transcript
ENST00000491024.1	novel transcript
ENST00000606034.1	CAGE supported TSS
ENST00000304952.11	MANE_select
ENST00000649529.1	CAGE supported TSS
ENST00000649529.1	CCDS6.1
ENST00000649529.1	LR annotation
ENST00000649529.1	MANE_select
ENST00000379370.7	MANE_select
ENST00000652369.1	CAGE supported TSS
ENST00000394517.7	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000433695.1	putative novel transcript
ENST00000451054.1	putative novel transcript
ENST00000453464.3	MANE_select
ENST00000421241.7	FLJ20584
ENST00000421241.7	MANE_select
ENST00000487177.5	novel transcript
ENST00000467751.5	novel transcript
ENST00000477196.5	novel transcript
ENST00000379319.5	alternative 5' UTR
ENST00000482816.5	NMD likely if extended
ENST00000482816.5	novel transcript
ENST00000462097.5	novel transcript
ENST00000475119.5	novel transcript
ENST00000648183.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000379289.6	CAGE supported TSS
ENST00000379289.6	MANE_select
ENST00000673999.1	alternative 5' UTR
ENST00000379288.3	FLJ36119
ENST00000460998.1	novel transcript
ENST00000486379.1	novel transcript
ENST00000379268.7	MANE_select
ENST00000379236.4	CAGE supported TSS
ENST00000379236.4	LR annotation
ENST00000379236.4	MANE_select
ENST00000360001.12	MANE_select
ENST00000494748.1	novel transcript
ENST00000478938.1	novel transcript
ENST00000403997.2	novel protein
ENST00000459994.2	QC splicing correct
ENST00000379198.5	CAGE supported TSS
ENST00000379198.5	CARS
ENST00000379198.5	LR annotation
ENST00000379198.5	MANE_select
ENST00000462849.1	novel transcript
ENST00000478606.1	novel transcript
ENST00000330388.2	MANE_select
ENST00000468365.1	novel transcript
ENST00000486627.1	putative novel transcript
ENST00000349431.11	MANE_select
ENST00000360466.6	alternative 5' UTR
ENST00000435198.5	alternative 5' UTR
ENST00000422076.5	alternative 5' UTR
ENST00000502382.1	alternative 5' UTR
ENST00000488418.2	alternative 5' UTR
ENST00000434139.1	QC splicing correct
ENST00000453732.1	putative novel transcript
ENST00000379116.10	MANE_select
ENST00000379116.10	NP_001123885.2
ENST00000354700.10	MANE_select
ENST00000354980.7	QC splicing correct
ENST00000438966.1	NMD likely if extended
ENST00000379031.10	FLJ90811
ENST00000379031.10	MANE_select
ENST00000470520.5	novel transcript
ENST00000463758.1	putative novel transcript
ENST00000467712.1	novel transcript
ENST00000493657.1	novel transcript
ENST00000470030.6	novel transcript
ENST00000435064.6	FLJ20542
ENST00000435064.6	MANE_select
ENST00000462432.5	novel transcript
ENST00000421495.6	novel transcript
ENST00000450926.6	QC splicing correct
ENST00000493534.6	novel transcript
ENST00000490853.5	novel transcript
ENST00000531019.5	alternative 3' UTR
ENST00000464957.1	novel transcript
ENST00000343938.9	MANE_select
ENST00000343938.9	MGC10334
ENST00000488011.1	novel transcript
ENST00000339381.6	MANE_select
ENST00000378888.10	MANE_select
ENST00000632445.1	alternative 3' UTR
ENST00000474033.5	novel transcript
ENST00000309212.11	MANE_select
ENST00000309212.11	MGC3047
ENST00000476718.1	novel transcript
ENST00000464351.1	putative novel transcript
ENST00000460473.1	putative novel transcript
ENST00000338370.7	Variant 2; alternatively spliced in 5' UTR
ENST00000321751.9	Variant 6; alternatively spliced in 5' UTR
ENST00000378853.3	Variant 3; alternatively spliced in 5' UTR
ENST00000400809.8	MANE_select
ENST00000659048.1	Assembled from SLRseq reads (SRP049776)
ENST00000448629.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000448629.6	Assembled from SLRseq reads (SRP049776)
ENST00000418833.2	putative novel transcript
ENST00000344843.12	MANE_select
ENST00000537107.6	MANE_select
ENST00000442470.1	alternative 5' UTR
ENST00000378821.3	not organism-supported
ENST00000434150.1	QC splicing correct
ENST00000495558.1	putative novel transcript
ENST00000338660.5	novel transcript
ENST00000476993.2	FLJ22215
ENST00000476993.2	MANE_select
ENST00000471398.1	putative novel transcript
ENST00000378785.7	LOC348498
ENST00000378785.7	MANE_select
ENST00000475091.2	novel transcript
ENST00000484537.2	novel transcript
ENST00000673477.1	MANE_select
ENST00000472194.6	QC splicing correct
ENST00000485748.5	novel transcript
ENST00000474481.1	novel transcript
ENST00000378756.8	CAGE supported TSS
ENST00000378756.8	FLJ10709
ENST00000378756.8	LR annotation
ENST00000378756.8	MANE_select
ENST00000536055.6	CAGE supported TSS
ENST00000378733.9	MANE_select
ENST00000291386.4	FLJ13048
ENST00000291386.4	MANE_select
ENST00000647566.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000422725.4	MANE_select
ENST00000658591.1	Assembled from SLRseq reads (SRP049776)
ENST00000607222.1	CAGE supported TSS
ENST00000487053.5	QC splicing correct
ENST00000510793.5	alternative 5' UTR
ENST00000503789.5	alternative 5' UTR
ENST00000378708.5	QC splicing correct
ENST00000506488.5	QC splicing correct
ENST00000512004.1	NMD likely if extended
ENST00000356026.10	MANE_select
ENST00000435358.5	retained intron causes frame-shifting creating a protein which significantly differs from the main variant
ENST00000341832.11	MANE_select
ENST00000341028.8	NMD likely if extended
ENST00000607013.1	CAGE supported TSS
ENST00000617444.5	MANE_select
ENST00000617444.5	alternative 5' UTR
ENST00000404249.8	MANE_select
ENST00000404249.8	isoform 1
ENST00000479362.1	alternative 5' UTR
ENST00000401096.2	alternative 5' UTR
ENST00000341426.9	MANE_select
ENST00000341426.9	alternative 5' UTR
ENST00000341426.9	alternatively spliced 5' UTR compared to variant 2
ENST00000342348.9	NP_001185924
ENST00000498806.1	novel transcript
ENST00000497747.5	novel transcript
ENST00000497615.1	novel transcript
ENST00000480542.1	novel transcript
ENST00000378609.9	MANE_select
ENST00000461893.5	novel transcript
ENST00000471354.1	not organism-supported
ENST00000378604.3	LOC163688
ENST00000307786.8	MANE_select
ENST00000482402.1	novel transcript
ENST00000462293.1	novel transcript
ENST00000310991.8	MANE_select
ENST00000378598.4	QC splicing correct
ENST00000464311.5	LOC348524
ENST00000270720.11	LOC339459
ENST00000659674.1	Assembled from SLRseq reads (SRP049776)
ENST00000378585.7	MANE_select
ENST00000378567.8	MANE_select
ENST00000495347.5	alternative 5' UTR
ENST00000470596.5	alternative 5' UTR
ENST00000496325.5	alternative 5' UTR
ENST00000481140.5	alternative 5' UTR
ENST00000482686.5	alternative 5' UTR
ENST00000470986.5	alternative 5' UTR
ENST00000470511.5	alternative 5' UTR
ENST00000471018.6	alternative 5' UTR
ENST00000466352.5	alternative 5' UTR
ENST00000333854.2	FLJ10346
ENST00000469733.5	FLJ46112
ENST00000414253.5	FLJ31031
ENST00000378546.9	MANE_select
ENST00000487186.5	FLJ44922
ENST00000378536.5	MANE_select
ENST00000478223.2	novel transcript
ENST00000378531.8	FLJ13941
ENST00000378531.8	MANE_select
ENST00000469374.5	novel transcript
ENST00000475812.1	novel transcript
ENST00000494279.2	novel transcript
ENST00000605895.6	MANE_select
ENST00000306256.13	alternative 5' UTR
ENST00000493207.1	novel transcript
ENST00000447513.7	CAGE supported TSS
ENST00000447513.7	MANE_select
ENST00000650293.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000507596.5	QC splicing correct
ENST00000449969.5	QC splicing correct
ENST00000449969.5	non canonical conserved
ENST00000378486.8	MANE_select
ENST00000378486.8	genebuild_only_MANE
ENST00000419816.6	non canonical conserved
ENST00000343889.8	non canonical conserved
ENST00000278878.6	non canonical conserved
ENST00000473964.5	KIAA0450
ENST00000378466.9	MANE_select
ENST00000378466.9	upstream ATG
ENST00000468002.2	QC splicing correct
ENST00000378453.4	MANE_select
ENST00000606645.2	CAGE supported TSS
ENST00000449660.5	FLJ11705
ENST00000416860.2	non canonical TEC
ENST00000426449.5	alternative 5' UTR
ENST00000434817.5	alternative 5' UTR
ENST00000435221.6	alternative 5' UTR
ENST00000451778.5	alternative 5' UTR
ENST00000355716.5	MANE_select
ENST00000475523.5	QC splicing correct
ENST00000475523.5	non canonical TEC
ENST00000456687.3	QC splicing correct
ENST00000456687.3	not best-in-genome evidence
ENST00000493183.5	novel transcript
ENST00000474659.5	novel transcript
ENST00000419916.8	MANE_select
ENST00000419916.8	NP_689584
ENST00000419916.8	upstream ATG
ENST00000378424.9	FLJ32465
ENST00000378424.9	upstream ATG
ENST00000537325.6	upstream ATG
ENST00000464043.5	QC splicing correct
ENST00000464043.5	non canonical TEC
ENST00000465233.6	novel transcript
ENST00000498083.2	novel transcript
ENST00000481683.5	novel transcript
ENST00000484099.5	novel transcript (FLJ37582)
ENST00000477045.1	novel transcript
ENST00000476686.1	novel transcript (DKFZp547M123)
ENST00000378412.8	MANE_select
ENST00000502556.5	QC splicing correct
ENST00000502556.5	non canonical TEC
ENST00000401095.8	QC splicing correct
ENST00000648684.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000664694.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000378404.4	MANE_select
ENST00000667159.1	Assembled from SLRseq reads (SRP049776)
ENST00000670730.1	Assembled from SLRseq reads (SRP049776)
ENST00000511072.5	NAGNAG splice site
ENST00000270722.10	MANE_select
ENST00000514189.5	NAGNAG splice site
ENST00000669140.1	Assembled from SLRseq reads (SRP049776)
ENST00000665088.1	Assembled from SLRseq reads (SRP049776)
ENST00000378378.9	MANE_select
ENST00000356575.9	MANE_select
ENST00000485002.6	QC splicing correct
ENST00000378344.7	FLJ39108, FLJ21756 and FLJ21811
ENST00000378344.7	MANE_select
ENST00000270708.12	FLJ20430
ENST00000270708.12	MANE_select
ENST00000471223.1	DKFZp686F1866
ENST00000419924.2	QC splicing correct
ENST00000378295.9	MANE_select
ENST00000378295.9	alpha
ENST00000604074.5	delta
ENST00000354437.8	beta
ENST00000603362.5	epsilon
ENST00000604479.5	zeta
ENST00000378280.5	gamma
ENST00000647831.1	NAGNAG splice site
ENST00000648600.1	NAGNAG splice site
ENST00000649123.1	NAGNAG splice site
ENST00000608600.1	NAGNAG splice site
ENST00000649290.1	NAGNAG splice site
ENST00000647686.1	NAGNAG splice site
ENST00000648935.1	NAGNAG splice site
ENST00000462521.2	not organism-supported
ENST00000294600.7	FLJ32825
ENST00000294600.7	MANE_select
ENST00000642557.4	CAGE supported TSS
ENST00000642557.4	MANE_select
ENST00000642557.4	alternative 5' UTR
ENST00000452264.1	alternative 5' UTR
ENST00000378251.3	KIAA1185
ENST00000378251.3	MANE_select
ENST00000462356.5	novel transcript
ENST00000479239.1	novel transcript
ENST00000675966.1	align_id:3510631|asmbl_796
ENST00000676052.1	align_id:3510650|asmbl_815
ENST00000378230.8	KIAA0562
ENST00000378230.8	MANE_select
ENST00000674623.1	align_id:3510622|asmbl_787
ENST00000675200.1	align_id:3510630|asmbl_795
ENST00000674985.1	align_id:3510628|asmbl_793
ENST00000674879.1	align_id:3510627|asmbl_792
ENST00000675677.1	align_id:3510629|asmbl_794
ENST00000675750.1	align_id:3510633|asmbl_798
ENST00000676009.1	align_id:3510621|asmbl_786
ENST00000675108.1	align_id:3510632|asmbl_797
ENST00000675666.1	align_id:3510620|asmbl_785
ENST00000674558.1	align_id:3510623|asmbl_788
ENST00000674558.1	upstream ATG
ENST00000675334.1	align_id:3510625|asmbl_790
ENST00000674544.1	align_id:3510626|asmbl_791
ENST00000675375.1	align_id:3510624|asmbl_789
ENST00000484420.1	novel transcript
ENST00000428079.6	align_id:3510618|asmbl_783
ENST00000461667.2	align_id:3510619|asmbl_784
ENST00000460038.5	novel transcript
ENST00000494653.5	novel transcript
ENST00000675520.1	align_id:3510636|asmbl_801
ENST00000676046.1	align_id:3510648|asmbl_813
ENST00000378209.8	MANE_select
ENST00000486765.5	novel transcript
ENST00000474140.1	novel transcript (FLJ43102)
ENST00000361605.4	MANE_select
ENST00000681823.1	alternative 3' UTR
ENST00000667408.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000456897.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000412674.1	FLJ42718
ENST00000664502.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425194.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671015.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000642026.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000635312.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669931.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423197.2	FLJ36179
ENST00000665284.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663417.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670434.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668086.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000633821.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671656.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659315.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667352.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667354.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666685.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659083.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659059.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661628.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000378191.5	MANE_select
ENST00000378191.5	NMD exception
ENST00000378190.7	NMD exception
ENST00000466761.1	QC splicing correct
ENST00000658045.1	Assembled from SLRseq reads (SRP049776)
ENST00000661891.1	Assembled from SLRseq reads (SRP049776)
ENST00000649109.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000478423.6	non canonical polymorphism
ENST00000378156.9	MANE_select
ENST00000378156.9	non canonical polymorphism
ENST00000489180.6	non canonical polymorphism
ENST00000378169.7	QC splicing correct
ENST00000378169.7	non canonical polymorphism
ENST00000506941.1	non canonical polymorphism
ENST00000655548.1	alternative 5' UTR
ENST00000378111.6	alternative 5' UTR
ENST00000671676.1	alternative 5' UTR
ENST00000658883.1	alternative 5' UTR
ENST00000389632.9	alternative 5' UTR
ENST00000428161.6	alternative 5' UTR
ENST00000352527.6	alternative 5' UTR
ENST00000655703.1	alternative 5' UTR
ENST00000669250.1	alternative 5' UTR
ENST00000164247.5	alternative 5' UTR
ENST00000668559.1	alternative 5' UTR
ENST00000378092.6	alternative 5' UTR
ENST00000378083.7	CAGE supported TSS
ENST00000662147.1	CAGE supported TSS
ENST00000662147.1	alternative 5' UTR
ENST00000458166.6	CAGE supported TSS
ENST00000671076.1	alternative 3' UTR
ENST00000262450.8	MANE_select
ENST00000377999.5	translation extended by 137 amino acids at the N-terminal compared to the translation in Em:AK126012.1
ENST00000496404.1	non canonical TEC
ENST00000234875.9	MANE_select
ENST00000377939.5	FLJ45800
ENST00000377939.5	MANE_select
ENST00000496676.5	FLJ32096
ENST00000343813.10	MANE_select
ENST00000495791.1	QC splicing correct
ENST00000650463.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000441724.1	LINC00337
ENST00000377898.4	MANE_select
ENST00000377893.3	MANE_select
ENST00000608083.5	CAGE supported TSS
ENST00000361521.9	MANE_select
ENST00000607670.1	CAGE supported TSS
ENST00000377836.8	alternative 5' UTR
ENST00000377834.8	FLJ33803 and FLJ13692
ENST00000377834.8	MANE_select
ENST00000645284.1	CAGE supported TSS
ENST00000645284.1	LR annotation
ENST00000645284.1	MANE_select
ENST00000461727.6	CAGE supported TSS
ENST00000475228.6	CAGE supported TSS
ENST00000478323.1	CAGE supported TSS
ENST00000475479.2	CAGE supported TSS
ENST00000636644.1	CAGE supported TSS
ENST00000419034.1	QC splicing correct
ENST00000647810.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000647810.1	NAGNAG splice site
ENST00000356876.8	MANE_select
ENST00000487949.4	CAGE supported TSS
ENST00000487949.4	novel transcript FLJ33882
ENST00000489097.6	novel transcript FLJ00260
ENST00000535355.6	CAGE supported TSS
ENST00000400913.6	CAGE supported TSS
ENST00000377728.8	CAGE supported TSS
ENST00000377728.8	MANE_select
ENST00000675548.1	Snaptron_GTEX_filtered_canonical_neg
ENST00000675548.1	chr1:6477659:6495515:-:2.491:3161:7874:GT:AG
ENST00000675548.1	chr1:6495590:6496492:-:2.667:3365:8973:GT:AG
ENST00000377732.5	CAGE supported TSS
ENST00000400915.8	CAGE supported TSS
ENST00000400915.8	FLJ43562
ENST00000400915.8	NP_001036128
ENST00000400915.8	upstream ATG
ENST00000377740.5	FLJ39028 and KIAA0720
ENST00000377740.5	NP_941374
ENST00000377740.5	upstream ATG
ENST00000675694.1	align_id:3510795|asmbl_960
ENST00000675694.1	slrseq_merged_multi_lifted
ENST00000537245.6	upstream ATG
ENST00000675655.1	NMD likely if extended
ENST00000676362.1	NMD likely if extended
ENST00000675812.1	alternative 5' UTR
ENST00000377705.6	FLJ33965 and FLJ23323
ENST00000377705.6	MANE_select
ENST00000333172.11	MANE_select
ENST00000377674.9	MANE_select
ENST00000319084.9	alternative 5' UTR
ENST00000435905.5	alternative 5' UTR
ENST00000377658.8	FLJ90824 and FLJ32602
ENST00000377658.8	MANE_select
ENST00000377663.3	KIAA0469
ENST00000467612.5	novel transcript
ENST00000496707.5	novel transcript
ENST00000463043.1	QC splicing correct
ENST00000377648.5	FLJ40396 and FLJ14586
ENST00000377648.5	MANE_select
ENST00000054650.8	NAGNAG splice site
ENST00000307896.10	NAGNAG splice site
ENST00000377627.7	NAGNAG splice site
ENST00000484669.6	NAGNAG splice site
ENST00000484669.6	QC splicing correct
ENST00000472925.1	NAGNAG splice site
ENST00000465508.5	novel transcript (FLJ38067, FLJ36390)
ENST00000377577.10	FLJ10737 and DKFZp727C181
ENST00000377577.10	MANE_select
ENST00000472414.1	novel transcript
ENST00000473993.5	novel transcript
ENST00000469318.5	novel transcript
ENST00000485073.5	novel transcript
ENST00000460594.5	novel transcript
ENST00000465911.1	novel transcript
ENST00000421469.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000635092.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654537.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000303635.12	MANE_select
ENST00000054666.11	MANE_select
ENST00000361696.10	MANE_select
ENST00000377507.8	CAGE supported TSS
ENST00000377507.8	MANE_select
ENST00000674210.1	alternative 5' UTR
ENST00000493373.5	QC splicing correct
ENST00000338639.10	MANE_select
ENST00000338639.10	alternative 5' UTR
ENST00000338639.10	alternatively spliced 5' UTR, sharesd CDS with CTA-215D11.1-001
ENST00000377491.5	alternative 5' UTR
ENST00000377491.5	alternatively spliced 5' UTR, shares CDS with CTA-215D11.1-001
ENST00000377488.5	alternative 5' UTR
ENST00000377488.5	alternatively spliced 5' UTR, shares CDS with CTA-215D11.1-001
ENST00000474874.5	novel transcript
ENST00000377482.10	MANE_select
ENST00000467067.1	novel transcript
ENST00000487559.1	novel transcript
ENST00000670361.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000471889.7	MANE_select
ENST00000471889.7	upstream ATG
ENST00000481265.1	QC splicing correct
ENST00000400908.7	MANE_select
ENST00000400908.7	alternative 5' UTR
ENST00000377464.5	KIAA0458
ENST00000400907.6	QC splicing correct
ENST00000480342.5	FLJ38775
ENST00000653698.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000234590.10	CAGE supported TSS
ENST00000234590.10	LR annotation
ENST00000234590.10	MANE_select
ENST00000646370.2	3' end Assembled from SLRseq reads (ENA:SRP049776)
ENST00000646660.1	alternative 5' UTR
ENST00000646906.1	alternative 5' UTR
ENST00000643438.1	alternative 5' UTR
ENST00000489867.2	alternative 5' UTR
ENST00000377443.7	MANE_select
ENST00000480186.7	non canonical TEC
ENST00000377424.9	MANE_select
ENST00000377411.5	MANE_select
ENST00000632503.1	CAGE supported TSS
ENST00000412639.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664915.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657715.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665148.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000634966.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000377403.7	MANE_select
ENST00000495451.1	QC splicing correct
ENST00000328089.11	MANE_select
ENST00000450402.1	QC splicing correct
ENST00000450402.1	alternative 5' UTR
ENST00000357898.3	QC splicing correct
ENST00000357898.3	alternative 5' UTR
ENST00000377399.2	alternative 5' UTR
ENST00000302692.7	MANE_select
ENST00000340381.11	MANE_select
ENST00000377346.9	MANE_select
ENST00000377298.9	MANE_select
ENST00000650348.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000377263.6	MANE_select
ENST00000400904.7	alternative 5' UTR
ENST00000400904.7	alternatively spliced 5' UTR, shares CDS with RP11-84A14.1-001
ENST00000377258.5	alternative 5' UTR
ENST00000377258.5	alternatively spliced 5' UTR, shares CDS with RP11-84A14.1-001
ENST00000377256.1	QC splicing correct
ENST00000377256.1	alternative 5' UTR
ENST00000648956.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000377223.6	MANE_select
ENST00000377213.1	alternative 5' UTR
ENST00000377213.1	alternatively spliced 5' UTR, shares CDS with RP11-84A14.3-001
ENST00000462686.1	QC splicing correct
ENST00000377205.6	MANE_select
ENST00000413148.1	QC splicing correct
ENST00000315901.4	QC splicing correct
ENST00000294435.8	MANE_select
ENST00000343090.11	MANE_select
ENST00000676179.1	CAGE supported TSS
ENST00000676179.1	MANE_select
ENST00000377086.5	KIAA0591
ENST00000377083.5	KIAA1448
ENST00000495136.1	this variant and one or more of variant fragments RP4-736L20.1-007 through RP4-736L20.1-010 could be part of a single variant
ENST00000497835.1	this variant and one or more of variant fragments RP4-736L20.1-006 through RP4-736L20.1-010 could be part of a single variant
ENST00000465635.5	this variant and one or more of variant fragments RP4-736L20.1-006, 007 or 010 could be part of a single variant
ENST00000483340.1	this variant and one or more of variant fragments RP4-736L20.1-006, 007 or 010 could be part of a single variant
ENST00000470616.1	this variant and one or more of variant fragments RP4-736L20.1-006 through RP4-736L20.1-009 could be part of a single variant
ENST00000270776.13	MANE_select
ENST00000607572.1	CAGE supported TSS
ENST00000602296.6	overlapping uORF
ENST00000602296.6	upstream uORF
ENST00000309048.8	LOC374945
ENST00000309048.8	MANE_select
ENST00000477755.1	overlapping uORF
ENST00000477755.1	upstream uORF
ENST00000377049.4	MANE_select
ENST00000377049.4	upstream ATG
ENST00000377038.8	MANE_select
ENST00000424487.1	QC splicing correct
ENST00000356607.9	MANE_select
ENST00000663738.1	Assembled from SLRseq reads (SRP049776)
ENST00000377022.8	MANE_select
ENST00000478524.1	novel transcript
ENST00000447850.3	QC splicing correct
ENST00000344008.5	FLJ34970, FLJ20321
ENST00000490176.1	novel transcript
ENST00000496432.6	novel transcript
ENST00000492173.1	novel transcript (FLJ12223)
ENST00000478728.2	novel transcript
ENST00000472814.1	novel transcript
ENST00000476357.1	FLJ37833
ENST00000418570.6	FLJ37118
ENST00000520253.1	QC splicing correct
ENST00000473118.5	alternative 5' UTR
ENST00000473118.5	this variant and one or more of variant fragments RP4-635E18.2-007 through RP4-635E18.2-009 could be part of a single variant
ENST00000639083.1	alternative 5' UTR
ENST00000476201.5	this variant and one or more of variant fragments RP4-635E18.2-007 through RP4-635E18.2-009 could be part of a single variant
ENST00000472476.5	this variant and one or more of variant fragments RP4-635E18.2-007 through RP4-635E18.2-009 could be part of a single variant
ENST00000240185.8	MANE_select
ENST00000649624.1	NMD likely if extended
ENST00000649624.1	non canonical other
ENST00000620632.4	alternative 3' UTR
ENST00000610369.4	alternative 3' UTR
ENST00000611136.4	alternative 3' UTR
ENST00000477447.6	QC splicing correct
ENST00000477447.6	alternative 3' UTR
ENST00000496840.1	alternative 3' UTR
ENST00000622108.1	alternative 3' UTR
ENST00000607145.1	CAGE supported TSS
ENST00000400897.8	MANE_select
ENST00000376957.7	MANE_select
ENST00000376936.9	MANE_select
ENST00000474216.5	FLJ41371
ENST00000474216.5	this variant and variant fragment RP4-635E18.5-008 could be part of a single variant
ENST00000490565.1	this variant and one or more of variant fragments RP4-635E18.5-007 or RP4-635E18.5-008 could be part of a single variant
ENST00000469634.5	FLJ36636
ENST00000469634.5	this variant and one or more of variant fragments RP4-635E18.5-007 or RP4-635E18.5-008 could be part of a single variant
ENST00000478271.1	this variant and one or more of variant fragments RP4-635E18.5-007 or RP4-635E18.5-008 could be part of a single variant
ENST00000470611.5	NMD likely if extended
ENST00000498576.1	this variant and one or more of variant fragments RP4-635E18.5-004 through RP4-635E18.5-006 and RP4-635E18.5-008 could be part of a single variant
ENST00000460196.1	this variant and one or more of variant fragments RP4-635E18.5-003 through RP4-635E18.5-007 could be part of a single variant
ENST00000452378.1	FLJ30609
ENST00000361445.9	MANE_select
ENST00000445982.5	QC splicing correct
ENST00000376819.4	MANE_select
ENST00000376810.6	MANE_select
ENST00000486588.6	QC splicing correct
ENST00000294484.7	KIAA1337
ENST00000294484.7	MANE_select
ENST00000649975.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000453135.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000642025.1	alternative 3' UTR
ENST00000354287.5	MANE_select
ENST00000251547.10	MANE_select
ENST00000376753.9	MANE_select
ENST00000376692.9	MANE_select
ENST00000376692.9	genebuild_only_MANE
ENST00000376664.10	QC splicing correct
ENST00000294485.6	MANE_select
ENST00000314340.10	MANE_select
ENST00000376627.6	QC splicing correct
ENST00000376592.6	upstream ATG
ENST00000376590.9	MANE_select
ENST00000376590.9	alternative 5' UTR
ENST00000376590.9	alternatively spliced 5' UTR, shares CDS with RP11-56N19.4-001
ENST00000641805.1	NAGNAG splice site
ENST00000423400.7	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000423400.7	NAGNAG splice site
ENST00000641820.1	CAGE supported TSS
ENST00000641721.1	NMD likely if extended
ENST00000376486.3	NAGNAG splice site
ENST00000376486.3	alternative 5' UTR
ENST00000418034.1	alternative 5' UTR
ENST00000418034.1	alternatively spliced 5' UTR, shares CDS with RP11-56N19.4-001 (partial)
ENST00000431243.6	NMD likely if extended
ENST00000642002.1	NMD likely if extended
ENST00000413656.5	alternative 5' UTR
ENST00000413656.5	alternatively spliced 5' UTR, shares CDS with RP11-56N19.4-001 (partial)
ENST00000346436.11	MANE_select
ENST00000400892.3	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000376490.7	ClC-6b
ENST00000376490.7	NMD likely if extended
ENST00000376491.7	ClC-6d
ENST00000376491.7	NMD likely if extended
ENST00000376492.3	ClC-6c
ENST00000376492.3	NMD likely if extended
ENST00000376480.7	MANE_select
ENST00000376468.4	MANE_select
ENST00000661075.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649268.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000649268.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000666735.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658167.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660618.1	Assembled from SLRseq reads (SRP049776)
ENST00000376572.8	MANE_select
ENST00000376572.8	MGC33867
ENST00000376576.3	KIAA2013
ENST00000196061.5	MANE_select
ENST00000660216.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000675194.1	align_id:3511611|asmbl_1776
ENST00000675817.1	align_id:3511603|asmbl_1768
ENST00000675298.1	align_id:3511609|asmbl_1774
ENST00000675298.1	long_read_pipeline_2
ENST00000676369.1	alternative 5' UTR
ENST00000676369.1	alternatively spliced 5' UTR, shares CDS with RP5-1077B9.3-001 (partial)
ENST00000675872.1	align_id:3511599|asmbl_1764
ENST00000674706.1	long_read_pipeline_2
ENST00000676426.1	align_id:3511601|asmbl_1766
ENST00000675512.1	align_id:3511595|asmbl_1760
ENST00000675113.1	align_id:3511590|asmbl_1755
ENST00000235329.10	MANE_select
ENST00000675483.1	align_id:3511594|asmbl_1759
ENST00000675404.1	align_id:3511600|asmbl_1765
ENST00000676295.1	align_id:3511608|asmbl_1773
ENST00000675043.1	align_id:3511610|asmbl_1775
ENST00000235332.6	MANE_select
ENST00000263932.7	MANE_select
ENST00000413146.6	annotated as coding because of evidence from PubMed:8839832
ENST00000647616.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000376259.7	MANE_select
ENST00000620676.6	CAGE supported TSS
ENST00000620676.6	LR annotation
ENST00000620676.6	MANE_select
ENST00000011700.10	NAGNAG splice site
ENST00000487188.1	FLJ10619
ENST00000543766.2	FLJ23066
ENST00000616661.5	MANE_select
ENST00000464917.5	alternative 5' UTR
ENST00000464917.5	novel transcript
ENST00000482265.1	novel transcript
ENST00000376221.2	MANE_select
ENST00000359318.8	MANE_select
ENST00000620146.2	rs3000859 intrroduced in GRCh38
ENST00000614859.5	MANE_select
ENST00000614859.5	MGC35194
ENST00000474179.1	novel transcript
ENST00000357726.5	MANE_select
ENST00000332296.7	FLJ43580
ENST00000332296.7	MANE_select
ENST00000437584.1	LOC343068
ENST00000317869.7	MANE_select
ENST00000240189.2	LOC65122
ENST00000240189.2	MANE_select
ENST00000235349.6	LOC343070
ENST00000235349.6	MANE_select
ENST00000235347.4	LOC343071
ENST00000235347.4	MANE_select
ENST00000376189.5	MANE_select
ENST00000376189.5	possible pseudogene- initial annotator
ENST00000436041.1	not best-in-genome evidence
ENST00000437631.1	QC splicing correct
ENST00000621994.3	MANE_select
ENST00000423177.1	not best-in-genome evidence
ENST00000432559.2	not best-in-genome evidence
ENST00000625019.3	MANE_select
ENST00000625019.3	not best-in-genome evidence
ENST00000638454.1	not best-in-genome evidence
ENST00000334600.7	MANE_select
ENST00000334600.7	not best-in-genome evidence
ENST00000602491.1	not best-in-genome evidence
ENST00000376101.3	QC splicing correct
ENST00000376101.3	confirm experimentally
ENST00000376098.4	MANE_select
ENST00000602960.1	not best-in-genome evidence
ENST00000376085.4	MANE_select
ENST00000621990.5	CAGE supported TSS
ENST00000621990.5	MANE_select
ENST00000513143.5	alternative 5' UTR
ENST00000487038.5	alternative 5' UTR
ENST00000475043.5	novel transcript
ENST00000488631.1	novel transcript
ENST00000441809.2	not best-in-genome evidence
ENST00000413440.5	alternative 5' UTR
ENST00000407521.7	alternative 5' UTR
ENST00000487453.1	alternative 5' UTR
ENST00000636564.1	upstream ATG
ENST00000376030.7	KIAA1026
ENST00000376030.7	MANE_select
ENST00000376030.7	NP_963922
ENST00000376028.8	alternative 5' UTR
ENST00000657859.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449215.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666654.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661309.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665002.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661613.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657979.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000447908.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670776.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666715.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000310916.6	FLJ23703
ENST00000404665.4	Assembled from SLRseq reads (SRP049776)
ENST00000650369.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000669314.1	Assembled from SLRseq reads (SRP049776)
ENST00000660005.1	Assembled from SLRseq reads (SRP049776)
ENST00000667108.1	Assembled from SLRseq reads (SRP049776)
ENST00000451326.6	alternative 5' UTR
ENST00000400796.7	alternative 5' UTR
ENST00000376008.3	MANE_select
ENST00000375995.3	CAGE supported TSS
ENST00000314668.13	FLJ36564
ENST00000477846.5	novel transcript
ENST00000472086.1	novel transcript
ENST00000472449.1	novel transcript
ENST00000428747.1	FLJ31291
ENST00000427824.1	non canonical TEC
ENST00000667833.1	Assembled from SLRseq reads (SRP049776)
ENST00000375980.9	MANE_select
ENST00000375980.9	MGC4342
ENST00000375949.5	MANE_select
ENST00000359621.5	MANE_select
ENST00000375910.8	MANE_select
ENST00000333868.10	MANE_select
ENST00000375890.8	NP_127463.2
ENST00000447522.5	alternative 5' UTR
ENST00000375838.5	FLJ34529
ENST00000475133.5	alternative 3' UTR
ENST00000375847.8	KIAA0962, FLJ13743, FLJ12468
ENST00000375847.8	MANE_select
ENST00000483270.1	novel transcript DKFZp434K0423
ENST00000472665.1	alternative 3' UTR
ENST00000479655.1	novel transcript
ENST00000490811.1	novel transcript
ENST00000495523.1	novel transcript
ENST00000375826.4	FLJ23384
ENST00000375826.4	MANE_select
ENST00000428945.1	FLJ34180
ENST00000480945.6	MANE_select
ENST00000486680.1	novel transcript
ENST00000320153.10	novel transcript FLJ32812
ENST00000483899.1	novel transcript
ENST00000375799.8	KIAA0842
ENST00000375799.8	MANE_select
ENST00000462455.1	QC splicing correct
ENST00000477849.1	novel transcript
ENST00000294454.6	FLJ14182
ENST00000294454.6	MANE_select
ENST00000489568.1	novel transcript
ENST00000465495.1	novel transcript
ENST00000375782.2	MANE_select
ENST00000465575.1	not organism-supported
ENST00000496928.6	alternative 5' UTR
ENST00000508310.5	alternative 5' UTR
ENST00000510393.5	alternative 5' UTR
ENST00000430076.5	alternative 5' UTR
ENST00000510929.5	alternative 5' UTR
ENST00000502638.5	alternative 5' UTR
ENST00000483633.6	alternative 5' UTR
ENST00000502739.5	alternative 5' UTR
ENST00000375766.8	FLJ30697
ENST00000375766.8	MANE_select
ENST00000375766.8	alternative 5' UTR
ENST00000431771.6	alternative 5' UTR
ENST00000332305.5	FLJ14538
ENST00000375759.8	KIAA0929, FLJ35013 and FLJ45672
ENST00000375759.8	MANE_select
ENST00000375743.9	MANE_select
ENST00000329454.2	FLJ45517
ENST00000329454.2	MANE_select
ENST00000411503.5	DKFZp686A14192
ENST00000442459.2	FLJ90670 and DKFZp686P1416
ENST00000375718.4	FLJ34956
ENST00000311890.14	MANE_select
ENST00000463576.5	NAGNAG splice site
ENST00000487046.1	NAGNAG splice site
ENST00000477360.2	QC splicing correct
ENST00000331433.5	MANE_select
ENST00000375679.9	MANE_select
ENST00000375662.5	FLJ36766
ENST00000375662.5	MANE_select
ENST00000358432.8	MANE_select
ENST00000478117.5	novel transcript
ENST00000270747.8	FLJ33962
ENST00000270747.8	MANE_select
ENST00000478210.1	novel transcript
ENST00000671994.1	CAGE supported TSS
ENST00000375599.8	MANE_select
ENST00000375599.8	MGC10731
ENST00000375592.8	KIAA1332
ENST00000375592.8	MANE_select
ENST00000478089.1	novel transcript
ENST00000401088.9	DKFZp566C0424
ENST00000401088.9	MANE_select
ENST00000335496.5	LOC374955
ENST00000375577.5	LOC374956
ENST00000504551.6	QC splicing correct
ENST00000337132.10	FLJ10420
ENST00000337132.10	MANE_select
ENST00000486390.1	novel transcript
ENST00000504858.5	QC splicing correct
ENST00000513161.1	QC splicing correct
ENST00000648419.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000430580.6	upstream uORF
ENST00000392963.5	QC splicing correct
ENST00000270691.9	LOC284729
ENST00000466256.6	QC splicing correct
ENST00000375541.10	MANE_select
ENST00000445545.6	QC splicing correct
ENST00000492631.5	QC splicing correct
ENST00000492631.5	non canonical TEC
ENST00000494191.6	QC splicing correct
ENST00000650268.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000442552.7	PMID:10585770
ENST00000414340.6	QC splicing correct
ENST00000422345.1	QC splicing correct
ENST00000414128.1	not best-in-genome evidence
ENST00000668460.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662795.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660907.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000453554.1	QC splicing correct
ENST00000666785.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658705.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654227.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671472.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660464.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666544.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000606899.1	CAGE supported TSS
ENST00000375535.4	MANE_select
ENST00000654887.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000341676.9	novel protein
ENST00000326735.13	MANE_select
ENST00000326735.13	novel protein
ENST00000466561.1	novel transcript
ENST00000463860.5	novel transcript (FLJ26510)
ENST00000375499.8	MANE_select
ENST00000485515.5	QC splicing correct
ENST00000375486.9	MANE_select
ENST00000479534.5	FLJ41169
ENST00000466151.1	QC splicing correct
ENST00000412427.1	FLJ45933
ENST00000375471.5	MANE_select
ENST00000648847.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000460293.1	FLJ45608
ENST00000375460.3	MANE_select
ENST00000375448.4	MANE_select
ENST00000468945.1	this variant and variant fragment RP1-20B21.1-005 could be part of a single variant
ENST00000467001.1	this variant and variant fragment RP1-20B21.1-003 could be part of a single variant
ENST00000619609.1	MANE_select
ENST00000375436.9	MANE_select
ENST00000474892.1	novel transcript
ENST00000375433.3	alternative 5' UTR
ENST00000361221.8	KIAA1626
ENST00000361221.8	MANE_select
ENST00000482892.1	novel transcript
ENST00000482892.1	this variant and one or more of variant fragments RP11-473A10.0-006, 008 and 009 could be part of a single variant
ENST00000469726.5	novel transcript FLJ44929
ENST00000375408.7	FLJ34701
ENST00000167825.5	novel transcript FLJ10521
ENST00000482359.1	this variant and one or more of variant fragments RP11-473A10.0-006, 007 and 009 could be part of a single variant
ENST00000466782.1	novel transcript
ENST00000466782.1	this variant and one or more of variant fragments RP11-473A10.0-006, 007 and 008 could be part of a single variant
ENST00000495593.1	this variant and one or more of variant fragments RP11-473A10.0-007, 008 and 009 could be part of a single variant
ENST00000669051.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670395.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653706.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000375406.2	LOC81569
ENST00000375406.2	MANE_select
ENST00000251296.4	MANE_select
ENST00000251296.4	MGC15730 and FLJ90835
ENST00000473951.1	putative novel transcript
ENST00000419667.2	QC splicing correct
ENST00000419667.2	non canonical TEC
ENST00000400664.3	MANE_select
ENST00000420770.7	CAGE supported TSS
ENST00000420770.7	LR annotation
ENST00000420770.7	MANE_select
ENST00000494072.3	alternative 3' UTR
ENST00000494072.3	not organism-supported
ENST00000290597.9	alternative 3' UTR
ENST00000375341.8	MANE_select
ENST00000455833.7	MANE_select
ENST00000455833.7	NP_001129737.1
ENST00000375254.8	MANE_select
ENST00000467272.6	QC splicing correct
ENST00000417040.1	not organism-supported
ENST00000477853.6	CCDS190.1
ENST00000477853.6	KIAA0090
ENST00000477853.6	MANE_select
ENST00000330263.5	MANE_select
ENST00000361640.5	MANE_select
ENST00000235835.8	MANE_select
ENST00000489286.5	QC splicing correct
ENST00000375153.8	MANE_select
ENST00000375153.8	alternative 5' UTR
ENST00000264202.8	MANE_select
ENST00000674299.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674299.1	Assembled from SLRseq reads (SRP049776)
ENST00000674449.1	Assembled from SLRseq reads (SRP049776)
ENST00000482808.2	Assembled from SLRseq reads (SRP049776)
ENST00000674390.1	Assembled from SLRseq reads (SRP049776)
ENST00000375144.6	Assembled from SLRseq reads (SRP049776)
ENST00000674432.1	Assembled from SLRseq reads (SRP049776)
ENST00000674228.1	Assembled from SLRseq reads (SRP049776)
ENST00000457768.6	Assembled from RACEseq reads
ENST00000674278.1	Assembled from SLRseq reads (SRP049776)
ENST00000648702.1	CAGE supported TSS
ENST00000322753.7	MANE_select
ENST00000462646.5	novel transcript
ENST00000467029.5	novel transcript
ENST00000481464.5	novel transcript
ENST00000498642.5	novel transcript
ENST00000479642.1	novel transcript
ENST00000428975.5	alternative 5' UTR
ENST00000451758.5	alternative 5' UTR
ENST00000439664.5	alternative 5' UTR
ENST00000375136.8	MANE_select
ENST00000425400.5	alternative 5' UTR
ENST00000289753.2	MANE_select
ENST00000375127.5	novel protein (LOC255104)
ENST00000294543.11	MANE_select
ENST00000294543.11	novel protein (LOC255104)
ENST00000489814.5	novel transcript (FLJ45636)
ENST00000489814.5	this variant and one or more of variant fragments RP5-1056L3.6-007 through .010 could be part of a single variant
ENST00000494342.1	novel transcript
ENST00000494342.1	this variant and one or more of variant fragments RP5-1056L3.6-004, .007 through .010 could be part of a single variant
ENST00000489135.5	novel transcript
ENST00000496528.5	novel transcript
ENST00000496528.5	this variant and one of variant fragments RP5-1056L3.6-005 or .006 could be part of a single variant
ENST00000462171.1	novel transcript
ENST00000462171.1	this variant and one of variant fragments RP5-1056L3.6-005 or .006 could be part of a single variant
ENST00000488449.1	novel transcript
ENST00000488449.1	this variant and one of variant fragments RP5-1056L3.6-005 or .006 could be part of a single variant
ENST00000375121.4	MANE_select
ENST00000375121.4	novel protein (FLJ20225)
ENST00000375120.4	MANE_select
ENST00000375120.4	novel protein (KIAA0459)
ENST00000466697.1	RP11-91K11.3-003
ENST00000466697.1	novel transcript
ENST00000481686.1	RP11-91K11.3-002
ENST00000481686.1	novel transcript
ENST00000375116.3	MANE_select
ENST00000649436.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000482011.2	CAGE supported TSS
ENST00000375108.4	MANE_select
ENST00000375105.8	MANE_select
ENST00000375102.4	MANE_select
ENST00000660429.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652935.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000431027.1	QC splicing correct
ENST00000429261.2	confirm experimentally
ENST00000429261.2	novel protein similar to part of phospholipase A2
ENST00000679259.1	MANE_select
ENST00000679259.1	NM_001367969.2
ENST00000495760.2	novel transcript
ENST00000375099.4	MANE_select
ENST00000375099.4	novel protein (FLJ25429)
ENST00000659784.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000375079.6	confirm experimentally
ENST00000473325.5	novel transcript (FLJ43845)
ENST00000530722.5	alternative 5' UTR
ENST00000534075.1	alternative 5' UTR
ENST00000467486.5	novel transcript (FLJ32784)
ENST00000426428.5	novel protein (LOC339505)
ENST00000670217.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666314.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000635577.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000635564.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662632.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662632.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000660748.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652870.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661413.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000418743.5	novel transcript
ENST00000423486.1	QC splicing correct
ENST00000421114.1	QC splicing correct
ENST00000375078.4	MANE_select
ENST00000264198.5	FLJ12875
ENST00000264198.5	MANE_select
ENST00000332947.6	MANE_select
ENST00000375071.4	MANE_select
ENST00000321556.5	MANE_select
ENST00000492302.1	FLJ27236
ENST00000602624.7	CAGE supported TSS
ENST00000602624.7	MANE_select
ENST00000475210.1	this variant and one or both of variant fragments RP11-401M16.6.002 and .004 could be part of a single variant
ENST00000477229.1	this variant and one or both of variant fragments RP11-401M16.6.002 and .003 could be part of a single variant
ENST00000493818.1	this variant and one or more of variant fragments RP11-401M16.8-004 through 007 could be part of a single variant
ENST00000400463.8	MANE_select
ENST00000400463.8	Splice acceptor of exon 13 differs by three nucleotides from that of RP11-401M16.8-009
ENST00000247986.2	Splice acceptor of exon 13 differs by three nucleotides from that of RP11-401M16.8-004
ENST00000462858.5	this variant and one or more of variant fragments RP11-401M16.8-004 and 008 could be part of a single variant
ENST00000498225.1	this variant and one or more of variant fragments RP11-401M16.8-004 and 008 could be part of a single variant
ENST00000463389.1	this variant and one or more of variant fragments RP11-401M16.8-004 and 008 could be part of a single variant
ENST00000444387.7	MANE_select
ENST00000518294.5	alternative 5' UTR
ENST00000517430.5	alternative 5' UTR
ENST00000519434.1	alternative 5' UTR
ENST00000438032.6	MANE_select
ENST00000375003.6	DKFZp434I0612, DKFZp686I07120
ENST00000437575.5	alternative 5' UTR
ENST00000419490.5	alternative 5' UTR
ENST00000414993.1	alternative 5' UTR
ENST00000443615.1	alternative 5' UTR
ENST00000264211.12	QC splicing correct
ENST00000634879.2	confirm experimentally
ENST00000634879.2	the non-ATG initiation codon used here is predicted based on conservation, and not experimentally supported
ENST00000356916.7	non canonical TEC
ENST00000411888.5	QC splicing correct
ENST00000669329.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000374893.11	MANE_select
ENST00000649812.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000655030.1	Assembled from SLRseq reads (SRP049776)
ENST00000444647.1	QC splicing correct
ENST00000423921.1	QC splicing correct
ENST00000454000.6	NP_001243346.1
ENST00000475869.2	not best-in-genome evidence
ENST00000318249.10	MANE_select
ENST00000318249.10	NP_115640.1
ENST00000485941.2	not best-in-genome evidence
ENST00000434838.6	QC splicing correct
ENST00000434838.6	non canonical TEC
ENST00000467103.2	QC splicing correct
ENST00000467103.2	non canonical TEC
ENST00000477050.1	QC splicing correct
ENST00000374840.8	MANE_select
ENST00000374832.5	alternative 5' UTR
ENST00000317967.11	alternative 5' UTR
ENST00000447293.5	alternative 5' UTR
ENST00000308271.14	MANE_select
ENST00000344642.7	MANE_select
ENST00000484271.1	novel transcript
ENST00000374695.8	MANE_select
ENST00000374695.8	NP_005520.4
ENST00000486901.1	novel transcript
ENST00000481644.1	novel transcript
ENST00000493940.2	QC splicing correct
ENST00000498495.1	novel transcript
ENST00000480900.1	QC splicing correct
ENST00000412328.5	NMD likely if extended
ENST00000337107.11	MANE_select
ENST00000473526.1	QC splicing correct
ENST00000473526.1	not best-in-genome evidence
ENST00000290122.8	MANE_select
ENST00000655353.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655655.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657670.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000635097.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667783.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000498236.1	novel transcript
ENST00000315554.13	CAGE supported TSS
ENST00000656825.1	CAGE supported TSS
ENST00000656825.1	LR annotation
ENST00000656825.1	MANE_select
ENST00000656825.1	alternative 5' UTR
ENST00000651171.1	alternative 5' UTR
ENST00000411827.1	isoform 2 with an alternatively spliced 5'UTR
ENST00000662562.1	alternative 5' UTR
ENST00000431803.2	QC splicing correct
ENST00000290167.11	MANE_select
ENST00000648968.1	CAGE supported TSS
ENST00000487348.1	LOC343384
ENST00000650433.1	CAGE supported TSS
ENST00000375647.5	KIAA0478
ENST00000375647.5	MANE_select
ENST00000400239.6	alternative 5' UTR
ENST00000166244.8	MANE_select
ENST00000166244.8	ephrin receptor EphA8 precursor
ENST00000374642.8	MANE_select
ENST00000438241.1	alternative 5' UTR
ENST00000402322.1	alternative 5' UTR
ENST00000374640.9	MANE_select
ENST00000374640.9	alternative 5' UTR
ENST00000374637.1	alternative 5' UTR
ENST00000510260.5	QC splicing correct
ENST00000510260.5	alternative 5' UTR
ENST00000432749.6	QC splicing correct
ENST00000432749.6	alternative 5' UTR
ENST00000509305.6	MANE_select
ENST00000374630.8	MANE_select
ENST00000374627.1	non canonical polymorphism
ENST00000426928.6	QC splicing correct
ENST00000566855.4	MANE_select
ENST00000356634.7	KIAA0601
ENST00000400181.9	KIAA0601
ENST00000400181.9	MANE_select
ENST00000481879.1	novel transcript
ENST00000471849.5	alternative 5' UTR
ENST00000475164.2	QC splicing correct
ENST00000475164.2	alternative 5' UTR
ENST00000655082.1	Assembled from RACEseq reads
ENST00000647667.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000660265.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666981.1	Assembled from SLRseq reads (SRP049776)
ENST00000464516.1	this variant and one or more of variant fragments RP5-1057J7.2-005, 007 and 008 could be part of a single variant
ENST00000302271.11	MANE_select
ENST00000478691.5	QC splicing correct
ENST00000478691.5	non canonical conserved
ENST00000478691.5	upstream uORF
ENST00000374616.7	non canonical conserved
ENST00000476660.1	this variant and one or more of variant fragments RP5-1057J7.2-006, 007 and 008 could be part of a single variant
ENST00000374612.5	alternative 5' UTR
ENST00000606561.5	upstream uORF
ENST00000476451.2	this variant and one or more of variant fragments RP5-1057J7.2-005, 006 and 007 could be part of a single variant
ENST00000490652.1	this variant and one or more of variant fragments RP5-1057J7.2-005, 006 and 008 could be part of a single variant
ENST00000314011.9	KIAA1710
ENST00000314011.9	MANE_select
ENST00000374608.3	alternative 5' UTR
ENST00000374608.3	alternatively spliced 5'UTR shares CDS with RP5-1057J7.3-001
ENST00000671509.1	Assembled from SLRseq reads (SRP049776)
ENST00000454117.1	LOC148898
ENST00000518600.1	QC splicing correct
ENST00000450454.7	MANE_select
ENST00000450454.7	non canonical U12
ENST00000476978.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000476978.2	non canonical U12
ENST00000461794.1	this variant and variant fragment RP5-1057J7.5-002 could be part of a single variant
ENST00000336689.8	MANE_select
ENST00000437606.6	NP_001137250.1
ENST00000608765.1	alternative 5' UTR
ENST00000361729.3	MANE_select
ENST00000374561.6	MANE_select
ENST00000648225.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000477916.5	novel transcript
ENST00000374550.8	NAGNAG splice site
ENST00000643754.2	LR annotation
ENST00000643754.2	MANE_select
ENST00000655402.1	Assembled from SLRseq reads (SRP049776)
ENST00000664563.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652963.1	Assembled from RACEseq reads
ENST00000447961.1	novel transcript
ENST00000609199.1	CAGE supported TSS
ENST00000246151.9	MANE_select
ENST00000374514.8	MANE_select
ENST00000495365.5	novel transcript
ENST00000492577.1	novel transcript
ENST00000421070.1	alternative 5' UTR
ENST00000617979.5	MANE_select
ENST00000481736.5	novel transcript
ENST00000425913.5	alternative 5' UTR
ENST00000445705.1	alternative 5' UTR
ENST00000467493.5	novel transcript
ENST00000470383.1	novel transcript
ENST00000467070.1	novel transcript
ENST00000374490.8	MANE_select
ENST00000374490.8	QC splicing correct
ENST00000479458.1	novel transcript
ENST00000498698.1	novel transcript
ENST00000374479.4	MANE_select
ENST00000374472.5	MANE_select
ENST00000647887.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000471915.5	alternative 5' UTR
ENST00000374468.1	alternative 5' UTR
ENST00000334351.8	FLJ20312 and FLJ21121
ENST00000334351.8	MANE_select
ENST00000579103.1	this putative CDS is strongly conserved in vertebrates
ENST00000492112.3	MANE_select
ENST00000492112.3	non canonical U12
ENST00000344989.10	non canonical U12
ENST00000453840.7	QC splicing correct
ENST00000453840.7	non canonical U12
ENST00000484146.6	non canonical U12
ENST00000374452.9	non canonical U12
ENST00000374453.7	non canonical U12
ENST00000343255.9	non canonical U12
ENST00000374434.4	MANE_select
ENST00000475306.1	novel transcript
ENST00000270800.2	MANE_select
ENST00000327535.6	MANE_select
ENST00000327535.6	isoform 1
ENST00000327575.6	isoform 3
ENST00000374421.7	isoform 2
ENST00000361548.9	MANE_select
ENST00000361548.9	NP_937816.1
ENST00000524724.5	alternative 5' UTR
ENST00000337248.9	MANE_select
ENST00000337248.9	genebuild_only_MANE
ENST00000374409.5	LOC90529
ENST00000497384.1	novel transcript
ENST00000438866.1	novel transcript
ENST00000483261.1	novel transcript
ENST00000498488.5	novel transcript
ENST00000483528.1	novel transcript
ENST00000475760.1	novel transcript
ENST00000492753.1	novel transcript
ENST00000374399.9	MANE_select
ENST00000003912.7	DJ462O23.2
ENST00000488155.1	novel transcript
ENST00000538532.6	alternative 5' UTR
ENST00000374395.9	MANE_select
ENST00000374392.3	FLJ42528
ENST00000374392.3	MANE_select
ENST00000486262.1	novel transcript
ENST00000374389.8	QC splicing correct
ENST00000323848.14	MANE_select
ENST00000488683.1	alternative 3' UTR
ENST00000488683.1	non canonical TEC
ENST00000374379.9	MANE_select
ENST00000308873.11	MANE_select
ENST00000648660.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000648363.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000236273.9	MANE_select
ENST00000474160.1	novel transcript
ENST00000476231.1	novel transcript
ENST00000243189.12	MANE_select
ENST00000243189.12	NP_064713.3
ENST00000570063.5	QC splicing correct
ENST00000568701.1	alternative 5' UTR
ENST00000561867.1	alternative 5' UTR
ENST00000568996.1	alternative 5' UTR
ENST00000648012.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000454452.6	NP_001121163.1
ENST00000328664.9	NP_057208.2
ENST00000423253.1	NMD likely if extended
ENST00000423253.1	QC splicing correct
ENST00000498135.5	novel transcript
ENST00000491936.5	novel transcript
ENST00000480937.5	novel transcript
ENST00000374358.5	MANE_select
ENST00000468704.1	novel transcript
ENST00000487234.1	novel transcript
ENST00000374343.5	FLJ10747
ENST00000374343.5	MANE_select
ENST00000647928.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000470035.1	NMD likely if extended
ENST00000470035.1	novel transcript
ENST00000374338.5	MANE_select
ENST00000488127.1	novel transcript
ENST00000462394.1	novel transcript
ENST00000484476.5	novel transcript
ENST00000470950.1	novel transcript
ENST00000374332.9	MANE_select
ENST00000361547.7	MANE_select
ENST00000361547.7	protein incorporates selenocysteine (Sec) at UGA codon rather than the usual termination signal
ENST00000374315.1	protein incorporates selenocysteine (Sec) at UGA codon rather than the usual termination signal
ENST00000424294.5	alternative 5' UTR
ENST00000529116.5	alternative 5' UTR
ENST00000374303.7	MANE_select
ENST00000374303.7	genebuild_only_MANE
ENST00000469815.5	novel transcript
ENST00000525713.5	alternative 5' UTR
ENST00000526158.5	alternative 5' UTR
ENST00000374300.7	alternative 5' UTR
ENST00000466284.1	alternative 5' UTR
ENST00000531361.1	not organism-supported
ENST00000481602.1	putative novel transcript
ENST00000374298.4	MANE_select
ENST00000374298.4	MGC2603
ENST00000675840.1	MANE_select
ENST00000513116.1	FLJ32206
ENST00000455785.7	MANE_select
ENST00000357865.6	alternative 5' UTR
ENST00000374291.5	alternative 5' UTR
ENST00000446334.1	alternative 5' UTR
ENST00000374282.8	MANE_select
ENST00000374284.5	variant 4; alternatively spliced in 5' UTR
ENST00000439092.6	QC splicing correct
ENST00000439092.6	non canonical TEC
ENST00000374280.4	MANE_select
ENST00000374276.4	MANE_select
ENST00000374272.4	MANE_select
ENST00000374269.2	MANE_select
ENST00000374268.5	FLJ14050
ENST00000374268.5	MANE_select
ENST00000634842.2	MANE_select
ENST00000414762.1	putative novel transcript
ENST00000444682.1	putative novel transcript
ENST00000648649.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000374266.7	MANE_select
ENST00000361530.11	MANE_select
ENST00000456354.7	MANE_select
ENST00000448341.2	QC splicing correct
ENST00000451429.8	MANE_select
ENST00000480446.1	novel transcript
ENST00000468163.1	novel transcript
ENST00000491670.1	novel transcript
ENST00000270792.10	MANE_select
ENST00000374221.7	alternative 5' UTR
ENST00000442942.6	alternative 5' UTR
ENST00000374213.3	MANE_select
ENST00000475866.3	CAGE supported TSS
ENST00000308182.10	CAGE supported TSS
ENST00000308182.10	MANE_select
ENST00000374208.1	QC splicing correct
ENST00000374207.4	QC splicing correct
ENST00000640960.1	NMD likely if extended
ENST00000349618.8	MANE_select
ENST00000349618.8	MGC33414
ENST00000451801.5	alternative 5' UTR
ENST00000416125.1	alternative 5' UTR
ENST00000326279.11	MANE_select
ENST00000236342.12	MANE_select
ENST00000525682.6	NAGNAG splice site
ENST00000525682.6	QC splicing correct
ENST00000487944.5	novel transcript
ENST00000533087.5	QC splicing correct
ENST00000533087.5	alternative 5' UTR
ENST00000531312.5	alternative 5' UTR
ENST00000525165.5	alternative 5' UTR
ENST00000525326.5	alternative 5' UTR
ENST00000525546.5	alternative 5' UTR
ENST00000436153.6	QC splicing correct
ENST00000436153.6	alternative 5' UTR
ENST00000530781.5	alternative 5' UTR
ENST00000656565.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000361427.6	MANE_select
ENST00000468388.5	novel transcript
ENST00000464888.5	novel transcript
ENST00000463817.5	novel transcript
ENST00000467700.5	novel transcript
ENST00000466194.1	novel transcript
ENST00000418220.1	LOC151871
ENST00000526040.6	QC splicing correct
ENST00000374168.7	MANE_select
ENST00000374168.7	probable paralogue of RPS6KA1
ENST00000529454.5	alternative 5' UTR
ENST00000474934.1	novel transcript
ENST00000488985.1	novel transcript
ENST00000430799.7	NAGNAG splice site
ENST00000324856.13	MANE_select
ENST00000637465.1	alternative 5' UTR
ENST00000457599.6	NP_624361.1
ENST00000457599.6	confirm experimentally
ENST00000524572.1	alternative 5' UTR
ENST00000374152.7	CAGE supported TSS
ENST00000374152.7	confirm experimentally
ENST00000636219.1	NAGNAG splice site
ENST00000636794.1	NMD likely if extended
ENST00000455364.2	alternative 5' UTR
ENST00000674202.1	MANE_select
ENST00000472757.5	novel transcript
ENST00000674222.1	alternative 5' UTR
ENST00000374145.6	alternative 5' UTR
ENST00000431541.6	alternative 5' UTR
ENST00000674273.1	alternative 5' UTR
ENST00000078527.9	alternative 5' UTR
ENST00000374142.9	MANE_select
ENST00000339276.6	MANE_select
ENST00000374135.9	FLJ10349
ENST00000374135.9	MANE_select
ENST00000431781.2	non canonical TEC
ENST00000461282.1	novel transcript
ENST00000445019.5	non canonical TEC
ENST00000361720.10	FLJ12455
ENST00000361720.10	MANE_select
ENST00000321265.10	MANE_select
ENST00000484772.1	novel transcript
ENST00000254227.4	MANE_select
ENST00000320567.6	FLJ34633
ENST00000320567.6	MANE_select
ENST00000437956.1	DC2 pseudogene
ENST00000522111.3	MANE_select
ENST00000522111.3	NMD exception
ENST00000531285.1	NMD exception
ENST00000531285.1	alternative 3' UTR
ENST00000289166.6	MANE_select
ENST00000263980.8	MANE_select
ENST00000490329.1	novel transcript
ENST00000374084.2	alternative 5' UTR
ENST00000446783.1	FLJ20420 pseudogene
ENST00000319394.8	MANE_select
ENST00000319394.8	genebuild_only_MANE
ENST00000361771.7	KIAA1037
ENST00000491239.2	novel transcript
ENST00000472249.2	alternative 3' UTR
ENST00000472249.2	non canonical TEC
ENST00000374076.9	DKFZP564D0478
ENST00000374076.9	MANE_select
ENST00000608611.5	CAGE supported TSS
ENST00000616558.5	MANE_select
ENST00000616558.5	NP_001180237.1
ENST00000473280.1	alternative 5' UTR
ENST00000543823.1	alternative 5' UTR
ENST00000490170.5	novel transcript
ENST00000475199.1	novel transcript
ENST00000486046.5	alternative 3' UTR
ENST00000357582.3	LR annotation
ENST00000357582.3	MANE_select
ENST00000476509.1	novel transcript
ENST00000270879.9	MANE_select
ENST00000270879.9	isoform 1
ENST00000354982.2	isoform 2
ENST00000481748.1	novel transcript
ENST00000374030.3	MANE_select
ENST00000374024.4	MANE_select
ENST00000618852.5	MANE_select
ENST00000673934.1	MANE_select
ENST00000673934.1	alternative 5' UTR
ENST00000644989.1	QC splicing correct
ENST00000644989.1	alternative 5' UTR
ENST00000642416.1	alternative 5' UTR
ENST00000642245.1	NAGNAG splice site
ENST00000642245.1	alternative 5' UTR
ENST00000643308.1	NMD likely if extended
ENST00000487743.3	NMD likely if extended
ENST00000490295.2	novel transcript
ENST00000480033.3	QC splicing correct
ENST00000646642.1	NAGNAG splice site
ENST00000374005.8	MANE_select
ENST00000374004.5	alternative 5' UTR
ENST00000374004.5	alternative 5' UTR; shares CDS with RP1-159A19.2-001, RP1-159A19.2-002, RP1-159A19.2-007
ENST00000374003.7	alternative 5' UTR
ENST00000374003.7	alternative 5' UTR; shares CDS with RP1-159A19.2-001, RP1-159A19.2-004, RP1-159A19.2-007
ENST00000457296.5	alternative 5' UTR
ENST00000457296.5	alternative 5' UTR; shares CDS with RP1-159A19.2-001, RP1-159A19.2-004, RP1-159A19.2-004
ENST00000475472.5	novel transcript
ENST00000468038.1	novel transcript
ENST00000339145.8	isoform c
ENST00000361157.11	MANE_select
ENST00000361157.11	isoform a
ENST00000362020.4	isoform b
ENST00000662905.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000373954.11	MANE_select
ENST00000373954.11	NP_689873.1
ENST00000419687.6	NP_001137387.1
ENST00000373943.9	MANE_select
ENST00000468761.1	novel transcript
ENST00000481874.1	novel transcript
ENST00000472285.1	novel transcript
ENST00000660844.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000311772.10	MANE_select
ENST00000311772.10	isoform alpha
ENST00000236412.11	isoform gamma
ENST00000373931.8	isoform beta
ENST00000373921.8	MANE_select
ENST00000467258.1	novel transcript
ENST00000466068.1	novel transcript
ENST00000482828.1	novel transcript
ENST00000492877.1	novel transcript
ENST00000373912.8	MANE_select
ENST00000373894.8	MANE_select
ENST00000466793.1	novel transcript
ENST00000675575.1	QC splicing correct
ENST00000373884.6	MANE_select
ENST00000674618.1	NMD likely if extended
ENST00000373871.8	MANE_select
ENST00000373864.5	NAGNAG splice site
ENST00000495923.5	novel transcript
ENST00000471498.5	novel transcript
ENST00000468665.1	novel transcript
ENST00000373857.8	MANE_select
ENST00000373857.8	alternative 5' UTR
ENST00000373857.8	alternative 5' UTR;  shares CDS with RP5-1053E7.4-002
ENST00000305392.3	alternative 5' UTR
ENST00000305392.3	alternative 5' UTR;  shares CDS with RP5-1053E7.4-001
ENST00000263697.6	MANE_select
ENST00000470967.1	this variant and one of variant fragments RP3-429K2.1-004 or 005 could be part of a single variant
ENST00000482674.5	this variant and variant fragment RP3-429K2.1-003 could be part of a single variant
ENST00000488868.1	this variant and variant fragment RP3-429K2.1-003 could be part of a single variant
ENST00000497986.5	NP_835497.1
ENST00000335514.10	CCDS319.1
ENST00000335514.10	MANE_select
ENST00000465645.1	NP_835498.1
ENST00000253063.4	MANE_select
ENST00000479574.5	novel transcript
ENST00000373842.9	MANE_select
ENST00000475655.1	novel transcript
ENST00000474683.1	novel transcript
ENST00000633371.1	NMD likely if extended
ENST00000373839.8	CCDS41293.1
ENST00000373839.8	FLJ13171
ENST00000373839.8	MANE_select
ENST00000373839.8	NP_001041648.1
ENST00000373836.4	CCDS41294.1
ENST00000373836.4	NP_076412.3
ENST00000649185.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000427469.5	alternative 5' UTR
ENST00000434290.6	upstream ATG
ENST00000373833.10	alternative 5' UTR
ENST00000373831.7	NP_001041659.1
ENST00000430407.1	alternative 5' UTR
ENST00000429051.1	NMD likely if extended
ENST00000437681.1	FLJ35407
ENST00000447051.2	QC splicing correct
ENST00000373830.4	FLJ20503
ENST00000373830.4	MANE_select
ENST00000495995.5	novel transcript (FLJ13493)
ENST00000411406.3	novel transcript
ENST00000480930.5	novel transcript
ENST00000491577.5	novel transcript
ENST00000464880.5	novel transcript
ENST00000497790.5	novel transcript
ENST00000495215.5	novel transcript
ENST00000464093.1	novel transcript
ENST00000484775.1	novel transcript
ENST00000373824.9	MANE_select
ENST00000373824.9	alternative 5' UTR
ENST00000373824.9	alternatively spliced 5' UTR shares CDS with RP4-669K10.7-001
ENST00000465518.3	FLJ22356
ENST00000465518.3	MANE_select
ENST00000427804.1	QC splicing correct
ENST00000361872.8	alternative 5' UTR
ENST00000361872.8	alternatively spliced 5' UTR, shares CDS with RP11-318E23.1-002
ENST00000373816.6	MANE_select
ENST00000474884.5	QC splicing correct
ENST00000474884.5	alternative 5' UTR
ENST00000373812.8	MANE_select
ENST00000541996.5	NP_001166299.1
ENST00000478283.5	novel transcript
ENST00000475796.5	novel transcript
ENST00000468863.1	novel transcript
ENST00000234961.7	MANE_select
ENST00000647103.1	NP_001159479
ENST00000644342.1	NAGNAG splice site
ENST00000482464.6	NAGNAG splice site
ENST00000646260.1	alternative 5' UTR
ENST00000373798.5	alternative 5' UTR
ENST00000644600.1	alternative 5' UTR
ENST00000649674.1	NAGNAG splice site
ENST00000643173.1	alternative 5' UTR
ENST00000644780.1	alternative 5' UTR
ENST00000343067.9	MANE_select
ENST00000343067.9	alternative 5' UTR
ENST00000643604.1	alternative 5' UTR
ENST00000373797.2	alternative 5' UTR
ENST00000349460.9	alternative 5' UTR
ENST00000645184.1	alternative 5' UTR
ENST00000645999.1	NAGNAG splice site
ENST00000644470.1	NAGNAG splice site
ENST00000460378.1	this variant and variant fragment RP11-242O24.1-007 could be part of a single variant.
ENST00000462032.1	this variant and variant fragment RP11-242O24.1-007 could be part of a single variant.
ENST00000521452.2	MANE_select
ENST00000420504.2	alternative 5' UTR
ENST00000373795.7	MANE_select
ENST00000263702.11	MANE_select
ENST00000453185.5	NMD likely if extended
ENST00000478505.6	QC splicing correct
ENST00000475861.6	QC splicing correct
ENST00000373779.8	MANE_select
ENST00000465525.6	QC splicing correct
ENST00000445180.2	QC splicing correct
ENST00000373765.5	MANE_select
ENST00000414532.6	FLJ46197
ENST00000414532.6	QC splicing correct
ENST00000454613.1	FLJ33163
ENST00000649861.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000655364.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000294507.4	MANE_select
ENST00000658212.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671661.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000635009.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000430320.3	QC splicing correct
ENST00000659931.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000635357.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659416.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000634587.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000634980.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667276.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000339394.7	MANE_select
ENST00000426105.7	MANE_select
ENST00000426105.7	NP_001018494.1
ENST00000531867.1	alternative 5' UTR
ENST00000373736.7	MANE_select
ENST00000263694.9	FLJ90035
ENST00000263694.9	MANE_select
ENST00000486941.1	novel transcript
ENST00000486941.1	this variant and one or more of variant fragments RP11-490K7.3-006 and 007 could be part of a single variant
ENST00000489853.1	novel transcript (FLJ41108)
ENST00000489853.1	this variant and variant fragment RP11-490K7.3-007 could be part of a single variant
ENST00000373720.3	this variant and one or more of variant fragments RP11-490K7.3-006 and 007 could be part of a single variant
ENST00000491106.1	novel transcript
ENST00000491106.1	this variant and one or more of variant fragments RP11-490K7.3-006 and 007 could be part of a single variant
ENST00000474025.1	novel transcript
ENST00000474025.1	this variant and one or more of variant fragments RP11-490K7.3-002, 004, 005 and 007 could be part of a single variant
ENST00000463988.1	novel transcript
ENST00000463988.1	this variant and one or more of variant fragments RP11-490K7.3-002 through 006 could be part of a single variant
ENST00000479629.5	novel transcript
ENST00000373714.5	alternative 5' UTR
ENST00000373714.5	alternatively spliced 5' UTR, shares CDS with RP11-266K22.1-001
ENST00000344147.10	MANE_select
ENST00000627541.1	upstream ATG
ENST00000373713.7	MANE_select
ENST00000482018.1	QC splicing correct
ENST00000482018.1	alternative 5' UTR
ENST00000373710.5	FLJ45757
ENST00000373709.8	MANE_select
ENST00000491976.1	FLJ36465
ENST00000664491.1	Assembled from RACEseq reads
ENST00000271064.12	MANE_select
ENST00000481165.5	FLJ00196
ENST00000373703.5	MANE_select
ENST00000478502.5	novel transcript
ENST00000489164.5	novel transcript
ENST00000492061.5	novel transcript
ENST00000496805.5	novel transcript
ENST00000472443.1	novel transcript
ENST00000373672.8	MANE_select
ENST00000373672.8	NP_001847
ENST00000479100.1	QC splicing correct
ENST00000474000.5	QC splicing correct
ENST00000398556.7	QC splicing correct
ENST00000373658.8	MANE_select
ENST00000373658.8	NAGNAG splice site
ENST00000465256.5	FLJ41398
ENST00000530134.5	NMD likely if extended
ENST00000436464.1	alternative 5' UTR
ENST00000257100.7	FLJ33697
ENST00000485944.5	FLJ39908
ENST00000528791.5	alternative 5' UTR
ENST00000525930.1	alternative 5' UTR
ENST00000453837.1	FLJ46627
ENST00000647444.2	MANE_select
ENST00000649841.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000532001.6	alternative 5' UTR
ENST00000468531.1	alternative 5' UTR
ENST00000534796.5	QC splicing correct
ENST00000534796.5	alternative 5' UTR
ENST00000532289.1	alternative 5' UTR
ENST00000526960.1	alternative 5' UTR
ENST00000524384.5	QC splicing correct
ENST00000524384.5	alternative 5' UTR
ENST00000494444.2	QC splicing correct
ENST00000529477.5	alternative 5' UTR
ENST00000475464.1	alternative 5' UTR
ENST00000327300.12	MANE_select
ENST00000487305.5	novel transcript
ENST00000336294.10	FLJ10315
ENST00000336294.10	MANE_select
ENST00000441402.5	novel transcript
ENST00000472503.5	novel transcript
ENST00000468135.5	novel transcript
ENST00000466321.5	novel transcript
ENST00000476968.5	QC splicing correct
ENST00000498613.1	novel transcript
ENST00000373625.8	MANE_select
ENST00000373610.8	MANE_select
ENST00000373609.1	alternative 5' UTR
ENST00000373602.10	MANE_select
ENST00000469003.5	novel transcript
ENST00000483009.1	novel transcript
ENST00000291358.11	FLJ10547
ENST00000291358.11	MANE_select
ENST00000537469.2	NP_001153514.1
ENST00000466796.1	novel transcript
ENST00000309777.11	MANE_select
ENST00000485689.1	putative novel transcript
ENST00000487174.1	novel transcript
ENST00000677701.1	alternative 5' UTR
ENST00000677760.1	alternative 5' UTR
ENST00000676801.1	alternative 5' UTR
ENST00000677202.1	alternative 5' UTR
ENST00000474371.2	novel transcript
ENST00000677378.1	NAGNAG splice site
ENST00000677640.1	alternative 3' UTR
ENST00000678842.1	EST evidence: BE006218.1, BF375289.1 and BE006284.1
ENST00000678842.1	alternative 3' UTR
ENST00000677540.1	alternative 3' UTR
ENST00000471486.6	novel transcript
ENST00000483517.5	EST evidence: BY049629.1
ENST00000483517.5	QC splicing correct
ENST00000373582.4	MANE_select
ENST00000373582.4	MGC10820
ENST00000336890.10	MANE_select
ENST00000461712.6	alternative 5' UTR
ENST00000373562.7	alternative 5' UTR
ENST00000373548.8	MANE_select
ENST00000484305.1	QC splicing correct
ENST00000329421.8	MANE_select
ENST00000373534.4	MANE_select
ENST00000455895.7	MANE_select
ENST00000526031.5	NP_001137362.1
ENST00000419121.6	NP_001137361.1
ENST00000446293.6	NP_001137360.1
ENST00000609129.2	MANE_select
ENST00000609129.2	NP_001139192.1
ENST00000373510.9	MANE_select
ENST00000492007.5	novel transcript
ENST00000373506.7	novel transcript
ENST00000467652.5	novel transcript
ENST00000473294.6	QC splicing correct
ENST00000473383.1	novel transcript
ENST00000466361.1	novel transcript
ENST00000414241.7	NP_001128727.1
ENST00000373493.10	MANE_select
ENST00000477563.6	QC splicing correct
ENST00000458695.6	NP_001128728.1
ENST00000490500.5	alternative 5' UTR
ENST00000445722.2	alternative 5' UTR
ENST00000482190.1	non canonical TEC
ENST00000409190.8	MANE_select
ENST00000417633.1	alternative 5' UTR
ENST00000426909.1	alternative 5' UTR
ENST00000401073.7	MANE_select
ENST00000401073.7	NP_065939.2
ENST00000468130.1	novel transcript
ENST00000373480.1	KIAA1522
ENST00000490826.1	FLJ44480
ENST00000487404.5	FLJ45247
ENST00000530710.5	alternative 5' UTR
ENST00000373476.5	alternative 5' UTR
ENST00000529027.5	alternative 5' UTR
ENST00000526230.1	alternative 5' UTR
ENST00000373475.10	MANE_select
ENST00000531256.1	alternative 5' UTR
ENST00000482212.1	alternative 5' UTR
ENST00000530552.1	alternative 5' UTR
ENST00000525203.5	QC splicing correct
ENST00000527692.1	QC splicing correct
ENST00000483143.1	novel transcript
ENST00000481487.1	novel transcript
ENST00000373471.9	FLJ34783
ENST00000373471.9	MANE_select
ENST00000649537.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000497068.1	novel transcript
ENST00000496770.1	novel transcript
ENST00000465346.1	QC splicing correct
ENST00000373467.4	MANE_select
ENST00000482771.1	novel transcript
ENST00000373463.8	MANE_select
ENST00000474144.5	novel transcript
ENST00000475208.5	novel transcript
ENST00000463914.1	novel transcript
ENST00000661031.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000235150.5	MANE_select
ENST00000373449.7	CAGE supported TSS
ENST00000373449.7	LR annotation
ENST00000672715.1	CAGE supported TSS
ENST00000672715.1	LR annotation
ENST00000672715.1	MANE_select
ENST00000478635.5	novel transcript
ENST00000481886.5	novel transcript (FLJ37808)
ENST00000475935.5	novel transcript
ENST00000294517.11	MANE_select
ENST00000294517.11	alternative 5' UTR
ENST00000462920.5	novel transcript
ENST00000471119.5	novel transcript (FLJ32489)
ENST00000495135.5	novel transcript
ENST00000477570.5	novel transcript
ENST00000483027.5	novel transcript
ENST00000473089.5	novel transcript
ENST00000484656.5	novel transcript
ENST00000652381.1	NMD likely if extended
ENST00000478204.5	novel transcript (FLJ16166)
ENST00000497280.1	novel transcript
ENST00000492521.1	novel transcript
ENST00000291416.10	MANE_select
ENST00000485148.1	novel transcript
ENST00000486583.1	novel transcript
ENST00000641727.1	Accession number: JD294024.1
ENST00000539719.6	FLJ25476
ENST00000539719.6	MANE_select
ENST00000483388.5	novel transcript
ENST00000442999.3	MANE_select
ENST00000485928.5	FLJ46105
ENST00000485928.5	this variant and one or more of variant fragments RP11-415J8.4-009 through 011 could be part of a single variant.
ENST00000373422.7	FLJ31867
ENST00000467894.5	this variant and one or more of variant fragments RP11-415J8.4-009 through 011 could be part of a single variant.
ENST00000486897.5	this variant and one or more of variant fragments RP11-415J8.4-009 through 011 could be part of a single variant.
ENST00000493483.5	this variant and one or more of variant fragments RP11-415J8.4-009 through 011 could be part of a single variant.
ENST00000473158.1	this variant and one or more of variant fragments RP11-415J8.4-009 through 011 could be part of a single variant.
ENST00000459964.1	this variant and one or more of variant fragments RP11-415J8.4-004 through 008 and 010, 011 could be part of a single variant.
ENST00000468406.5	this variant and one or more of variant fragments RP11-415J8.4-004 through 009 could be part of a single variant.
ENST00000484692.1	this variant and one or more of variant fragments RP11-415J8.4-004 through 009 could be part of a single variant.
ENST00000338325.1	QC splicing correct
ENST00000522796.1	alternative 5' UTR
ENST00000681531.1	MANE_select
ENST00000668264.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654712.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000659019.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663192.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662460.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661540.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665318.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663471.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000434181.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664189.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661122.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659870.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653768.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660205.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667628.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653656.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000488417.2	MANE_select
ENST00000488417.2	NP_001128206.1
ENST00000666642.1	Assembled from SLRseq reads (SRP049776)
ENST00000521580.3	MANE_select
ENST00000446026.1	alternative 5' UTR
ENST00000456842.1	alternative 5' UTR
ENST00000423898.1	alternative 5' UTR
ENST00000417239.1	alternative 5' UTR
ENST00000338513.1	MANE_select
ENST00000339480.3	CAGE supported TSS
ENST00000339480.3	LR annotation
ENST00000339480.3	MANE_select
ENST00000542839.1	QC splicing correct
ENST00000373366.3	MANE_select
ENST00000373366.3	alternative 5' UTR
ENST00000373366.3	alternative 5'UTR; shares CDS with RP1-34M23.3-002
ENST00000373362.3	alternative 5' UTR
ENST00000373362.3	alternative 5'UTR; shares CDS with RP1-34M23.3-002
ENST00000450137.1	alternative 5' UTR
ENST00000450137.1	alternative 5' UTR; shares CDS with RP1-34M23.4-001
ENST00000342280.5	MANE_select
ENST00000342280.5	alternative 5' UTR
ENST00000342280.5	alternative 5' UTR; shares CDS with RP1-34M23.4-002
ENST00000373347.6	MANE_select
ENST00000495979.1	novel transcript
ENST00000373337.3	CAGE supported TSS
ENST00000493328.5	novel transcript
ENST00000357182.9	MANE_select
ENST00000466345.1	novel transcript
ENST00000472971.1	novel transcript
ENST00000460607.1	novel transcript
ENST00000471566.1	putative novel transcript
ENST00000650449.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000417119.5	alternative 5' UTR
ENST00000417119.5	alternative 5' UTR; shares CDS with RP11-248I9.1-001 and RP11-248I9.1-002
ENST00000466390.5	novel transcript
ENST00000359858.9	MANE_select
ENST00000359858.9	alternative 5' UTR
ENST00000359858.9	alternative 5' UTR; shares CDS with RP11-248I9.1-001 and RP11-248I9.1-004
ENST00000488455.5	novel transcript
ENST00000475654.5	novel transcript
ENST00000373330.1	FLJ23151
ENST00000373330.1	alternative 5' UTR
ENST00000373330.1	alternative 5' UTR; shares CDS with RP11-248I9.1-002 and RP11-248I9.1-004
ENST00000476269.1	novel transcript
ENST00000463393.1	novel transcript
ENST00000357214.6	MANE_select
ENST00000314607.11	MANE_select
ENST00000457946.1	QC splicing correct
ENST00000482131.1	novel transcript
ENST00000470175.1	novel transcript
ENST00000492456.1	novel transcript
ENST00000325722.8	MANE_select
ENST00000426982.6	alternative 5' UTR
ENST00000473423.1	novel transcript
ENST00000474856.1	novel transcript
ENST00000440579.5	alternative 5' UTR
ENST00000492888.1	novel transcript
ENST00000469892.5	alternative 5' UTR
ENST00000494948.1	alternative 5' UTR
ENST00000473465.1	QC splicing correct
ENST00000373243.7	MANE_select
ENST00000459931.1	novel transcript
ENST00000373235.4	MANE_select
ENST00000650429.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000373237.4	MANE_select
ENST00000270815.5	FLJ38984
ENST00000270815.5	MANE_select
ENST00000318121.8	MANE_select
ENST00000318121.8	Q9HAW4-1
ENST00000373210.4	KIAA1567
ENST00000373210.4	MANE_select
ENST00000373204.6	MANE_select
ENST00000655341.1	Assembled from SLRseq reads (SRP049776)
ENST00000373191.9	MANE_select
ENST00000466576.2	QC splicing correct
ENST00000207457.8	MANE_select
ENST00000373178.5	MANE_select
ENST00000397799.2	MANE_select
ENST00000373166.8	MANE_select
ENST00000316156.8	FLJ10350
ENST00000373150.8	FLJ10350
ENST00000373148.5	FLJ38620
ENST00000469141.6	alternative 5' UTR
ENST00000648638.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000354618.10	FLJ22082
ENST00000354618.10	MANE_select
ENST00000453908.8	MANE_select
ENST00000505871.7	NP_078952.4
ENST00000505871.7	QC splicing correct
ENST00000508854.2	NMD likely if extended
ENST00000270824.1	FLJ10647
ENST00000657488.1	Assembled from RACEseq reads
ENST00000373132.4	MANE_select
ENST00000460017.1	QC splicing correct
ENST00000315732.3	MANE_select
ENST00000235532.9	MANE_select
ENST00000354267.3	NP_996668.1
ENST00000524789.1	not organism-supported
ENST00000373116.6	MANE_select
ENST00000488606.5	FLJ43240
ENST00000462067.1	FLJ11564
ENST00000373106.6	MANE_select
ENST00000464465.6	QC splicing correct
ENST00000533491.1	alternative 5' UTR
ENST00000664693.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000373091.8	MANE_select
ENST00000657513.1	Assembled from SLRseq reads (SRP049776)
ENST00000655056.1	Assembled from SLRseq reads (SRP049776)
ENST00000668045.1	Assembled from SLRseq reads (SRP049776)
ENST00000373087.7	MANE_select
ENST00000296214.10	FLJ11730
ENST00000296214.10	MANE_select
ENST00000475828.5	novel transcript
ENST00000487788.5	novel transcript
ENST00000487792.5	novel transcript
ENST00000485039.1	novel transcript
ENST00000296215.8	MANE_select
ENST00000468040.2	novel transcript
ENST00000493916.1	novel transcript
ENST00000652629.1	MANE_select
ENST00000490312.1	this variant and variant fragment RP3-423B22.6-002 or 005 could be part of a single variant.
ENST00000497858.1	FLJ45016
ENST00000497858.1	this variant and variant fragment RP3-423B22.6-004 could be part of a single variant.
ENST00000467277.1	this variant and variant fragment RP3-423B22.6-004 could be part of a single variant.
ENST00000490029.1	novel transcript
ENST00000490029.1	this variant and one or more of variant fragments RP3-423B22.7-004 through 008 could be part of a single variant.\n\
ENST00000373062.8	MANE_select
ENST00000462812.5	novel transcript (FLJ27187)
ENST00000462812.5	this variant and one or more of variant fragments RP3-423B22.7-004 through 008 could be part of a single variant.\n\
ENST00000538069.2	novel transcript
ENST00000538069.2	this variant and one or more of variant fragments RP3-423B22.7-002, 003, 006 through 008 could be part of a single variant
ENST00000469191.1	novel transcript
ENST00000469191.1	this variant and one or more of variant fragments RP3-423B22.7-002, 003, 006 through 008 could be part of a single variant.\n\
ENST00000463351.1	novel transcript
ENST00000463351.1	this variant and one or more of variant fragments RP3-423B22.7-002 through 005 could be part of a single variant.\n\
ENST00000488496.1	novel transcript
ENST00000488496.1	this variant and one or more of variant fragments RP3-423B22.7-002 through 005 could be part of a single variant.\n\
ENST00000615459.4	FLJ40906
ENST00000356545.7	MANE_select
ENST00000401068.1	alternative 5' UTR
ENST00000494120.1	QC splicing correct
ENST00000494120.1	non canonical TEC
ENST00000464178.1	novel transcript
ENST00000464085.5	alternative 5' UTR
ENST00000464085.5	upstream ATG
ENST00000491981.5	QC splicing correct
ENST00000461359.5	alternative 5' UTR
ENST00000461359.5	novel transcript
ENST00000461359.5	upstream ATG
ENST00000477060.1	alternative 5' UTR
ENST00000477060.1	novel transcript
ENST00000486637.1	alternative 5' UTR
ENST00000486637.1	novel transcript
ENST00000491797.1	novel transcript
ENST00000488137.5	NAGNAG splice site
ENST00000488137.5	alternative 5' UTR
ENST00000488137.5	upstream ATG
ENST00000472584.1	novel transcript
ENST00000619962.1	NAGNAG splice site
ENST00000619962.1	alternative 5' UTR
ENST00000619962.1	upstream ATG
ENST00000327331.2	FLJ10468
ENST00000327331.2	alternative 5' UTR
ENST00000327331.2	alternatively spliced 5' UTR, shares CDS with RP4-783C10.2-001
ENST00000373055.6	MANE_select
ENST00000432874.7	non canonical TEC
ENST00000446149.6	novel transcript
ENST00000373048.9	MANE_select
ENST00000453577.1	this variant and variant fragment RP4-783C10.3-004 could be part of a single variant
ENST00000373045.11	MANE_select
ENST00000433474.1	QC splicing correct
ENST00000373044.3	FLJ23476
ENST00000373044.3	MANE_select
ENST00000373043.1	1st intron retained
ENST00000373043.1	alternative 5' UTR
ENST00000419397.3	not organism-supported
ENST00000468084.1	NP_001136198.1
ENST00000373042.5	MANE_select
ENST00000373042.5	NP_940848.2
ENST00000373036.5	MANE_select
ENST00000468190.1	QC splicing correct
ENST00000373027.5	FLJ12784
ENST00000373024.8	MANE_select
ENST00000373024.8	QC splicing correct
ENST00000373024.8	non canonical conserved
ENST00000373026.5	QC splicing correct
ENST00000373026.5	non canonical conserved
ENST00000373021.1	QC splicing correct
ENST00000373021.1	non canonical conserved
ENST00000491406.2	QC splicing correct
ENST00000491406.2	non canonical conserved
ENST00000373019.5	MANE_select
ENST00000487062.1	this variant and one or more variant fragments RP11-100H21.1-002, 004 through 008 could be part of a single variant.\n\
ENST00000460925.1	this variant and one or more variant fragments RP11-100H21.1-002, 003, 005 and 006 could be part of a single variant.\n\
ENST00000489537.5	this variant and variant fragment RP11-100H21.1-003 could be part of a single variant.\n\
ENST00000461869.5	this variant and variant fragment RP11-100H21.1-003 could be part of a single variant.\n\
ENST00000470585.5	this variant and one or more variant fragments RP11-100H21.1-003 and 004 could be part of a single variant.\n\
ENST00000488934.1	this variant and one or more variant fragments RP11-100H21.1-002, 003 and 004 could be part of a single variant.\n\
ENST00000462258.1	this variant and one or more variant fragments RP11-100H21.1-003, 004 and 006 could be part of a single variant.\n\
ENST00000373016.4	MANE_select
ENST00000483182.5	novel transcript
ENST00000486563.1	novel transcript
ENST00000373014.5	MANE_select
ENST00000488453.1	novel transcript (FLJ13525)
ENST00000373012.5	MANE_select
ENST00000373012.5	not best-in-genome evidence
ENST00000428151.1	novel transcript
ENST00000424719.2	FK506 binding protein 3, 25kDa (FKBP3) pseudogene
ENST00000655033.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671301.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000431311.1	novel transcript
ENST00000649079.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000658664.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452971.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452971.2	novel transcript
ENST00000658241.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665359.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658982.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000634464.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660113.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658851.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658172.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659619.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654266.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658281.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671197.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658751.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000442006.2	heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) (HSPA5) pseudogene
ENST00000373001.4	MANE_select
ENST00000373001.4	Ras-related GTP binding C
ENST00000474456.1	Ras-related GTP binding C
ENST00000493015.1	Ras-related GTP binding C
ENST00000496778.1	Ras-related GTP binding C
ENST00000663032.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667635.1	Assembled from SLRseq reads (SRP049776)
ENST00000456813.1	novel transcript
ENST00000443161.1	novel transcript
ENST00000397572.5	MANE_select
ENST00000494695.4	c-myc binding protein
ENST00000495043.5	c-myc binding protein
ENST00000465771.3	c-myc binding protein
ENST00000357771.5	MANE_select
ENST00000360786.3	gap junction protein, alpha 10, 59kDa
ENST00000372990.6	MANE_select
ENST00000372990.6	genebuild_only_MANE
ENST00000432648.8	MANE_select
ENST00000446189.6	NP_001129747.1
ENST00000531822.1	QC splicing correct
ENST00000372967.3	alternative 5' UTR
ENST00000372969.8	MANE_select
ENST00000361689.7	QC splicing correct
ENST00000567887.5	QC splicing correct
ENST00000564288.5	QC splicing correct
ENST00000496804.5	QC splicing correct
ENST00000476350.1	KIAA1251
ENST00000372925.6	QC splicing correct
ENST00000528611.1	CAGE supported TSS
ENST00000289893.8	QC splicing correct
ENST00000469490.1	QC splicing correct
ENST00000360115.8	exons 5 and 9 found using dotter
ENST00000497964.1	FLJ13759
ENST00000496360.5	FLJ13223
ENST00000497807.1	DKFZp686F1899
ENST00000669616.1	Assembled from SLRseq reads (SRP049776)
ENST00000331593.6	MANE_select
ENST00000649325.1	FLJ36340
ENST00000676859.1	CAGE supported TSS
ENST00000527718.2	align_id:1281938|asmbl_1841
ENST00000492468.5	FLJ33791
ENST00000468476.1	FLJ43938
ENST00000372856.7	QC splicing correct
ENST00000372858.8	MANE_select
ENST00000372858.8	NP_001129125.1
ENST00000530186.1	alternative 3' UTR
ENST00000474378.1	QC splicing correct
ENST00000474378.1	non canonical TEC
ENST00000529216.1	not organism-supported
ENST00000451091.2	alternative 5' UTR
ENST00000531243.2	QC splicing correct
ENST00000531243.2	alternative 5' UTR
ENST00000531243.2	non canonical TEC
ENST00000415255.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650144.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000372852.4	MANE_select
ENST00000372844.8	DKFZp761G22
ENST00000372844.8	MANE_select
ENST00000324379.10	MANE_select
ENST00000372827.8	MANE_select
ENST00000327582.5	MANE_select
ENST00000648746.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000648678.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000316891.10	MANE_select
ENST00000316891.10	non canonical U12
ENST00000441669.6	confirm experimentally
ENST00000462797.5	QC splicing correct
ENST00000462797.5	non canonical U12
ENST00000372818.5	QC splicing correct
ENST00000372818.5	non canonical U12
ENST00000491865.5	QC splicing correct
ENST00000492612.6	QC splicing correct
ENST00000492612.6	non canonical U12
ENST00000489945.5	QC splicing correct
ENST00000489945.5	non canonical U12
ENST00000486825.6	QC splicing correct
ENST00000486825.6	non canonical U12
ENST00000469476.2	QC splicing correct
ENST00000469476.2	non canonical U12
ENST00000462243.2	QC splicing correct
ENST00000462243.2	non canonical U12
ENST00000372816.3	MANE_select
ENST00000372816.3	The methionine at the start of this CDS is well conserved across species. There is a methionine upstream (but no evidence to extend this transcript upstream) which is also well conserved across species
ENST00000450953.3	alternative 5' UTR
ENST00000372811.10	FLJ90702 and FLJ14997
ENST00000372811.10	MANE_select
ENST00000372809.5	FLJ35904
ENST00000483824.5	novel transcript DKFZp547G109
ENST00000469745.5	novel transcript
ENST00000480630.5	novel transcript
ENST00000491515.5	novel transcript
ENST00000459917.1	novel transcript
ENST00000481612.1	novel transcript
ENST00000372797.7	alternative 5' UTR
ENST00000372797.7	alternative 5'UTR; shares CDS with RP11-115D7.1-002, RP11-115D7.1-003, RP11-115D7.1-007, RP11-115D7.1-008, RP11-115D7.1-010, RP11-115D7.1-011, RP11-115D7.1-012, RP11-115D7.1-016, RP11-115D7.1-017 and RP11-115D7.1-018
ENST00000372802.5	alternative 5' UTR
ENST00000372802.5	alternative 5' UTR; shares CDs with RP11-115D7.1-005, RP11-115D7.1-006 and RP11-115D7.1-013
ENST00000449311.5	alternative 5' UTR
ENST00000449311.5	alternative 5'UTR; shares CDS with RP11-115D7.1-001, RP11-115D7.1-002, RP11-115D7.1-003, RP11-115D7.1-008, RP11-115D7.1-010, RP11-115D7.1-011, RP11-115D7.1-012, RP11-115D7.1-016, RP11-115D7.1-017 and RP11-115D7.1-018
ENST00000421589.5	alternative 5' UTR
ENST00000421589.5	alternative 5'UTR; shares CDS with RP11-115D7.1-001, RP11-115D7.1-002, RP11-115D7.1-003, RP11-115D7.1-007, RP11-115D7.1-010, RP11-115D7.1-011, RP11-115D7.1-012, RP11-115D7.1-016, RP11-115D7.1-017 and RP11-115D7.1-018
ENST00000372792.7	alternative 5' UTR
ENST00000372792.7	alternative 5'UTR; shares CDS with RP11-115D7.1-001, RP11-115D7.1-002, RP11-115D7.1-007, RP11-115D7.1-008, RP11-115D7.1-010, RP11-115D7.1-011, RP11-115D7.1-012, RP11-115D7.1-016, RP11-115D7.1-017 and RP11-115D7.1-018
ENST00000372805.8	MANE_select
ENST00000372805.8	alternative 5' UTR
ENST00000372805.8	alternative 5'UTR; shares CDS with RP11-115D7.1-001, RP11-115D7.1-003, RP11-115D7.1-007, RP11-115D7.1-008, RP11-115D7.1-010, RP11-115D7.1-011, RP11-115D7.1-012, RP11-115D7.1-016, RP11-115D7.1-017 and RP11-115D7.1-018
ENST00000414281.5	alternative 5' UTR
ENST00000414281.5	alternative 5'UTR; shares CDS with RP11-115D7.1-001, RP11-115D7.1-002, RP11-115D7.1-003, RP11-115D7.1-007, RP11-115D7.1-008, RP11-115D7.1-010, RP11-115D7.1-012, RP11-115D7.1-016, RP11-115D7.1-017 and RP11-115D7.1-018
ENST00000420216.5	alternative 5' UTR
ENST00000420216.5	alternative 5'UTR; shares CDS with RP11-115D7.1-001, RP11-115D7.1-002, RP11-115D7.1-003, RP11-115D7.1-007, RP11-115D7.1-008, RP11-115D7.1-010, RP11-115D7.1-011, RP11-115D7.1-016, RP11-115D7.1-017 and RP11-115D7.1-018
ENST00000372798.5	alternative 5' UTR
ENST00000372798.5	alternative 5' UTR; shares CDs with RP11-115D7.1-004, RP11-115D7.1-005 and RP11-115D7.1-013
ENST00000340450.7	alternative 5' UTR
ENST00000340450.7	alternative 5' UTR; shares CDs with RP11-115D7.1-004, RP11-115D7.1-006, and RP11-115D7.1-013
ENST00000435719.5	alternative 5' UTR
ENST00000435719.5	alternative 5' UTR; shares CDs with RP11-115D7.1-004, RP11-115D7.1-005, and RP11-115D7.1-006
ENST00000427843.5	alternative 5' UTR
ENST00000427843.5	alternative 5'UTR; shares CDS with RP11-115D7.1-001, RP11-115D7.1-002, RP11-115D7.1-003, RP11-115D7.1-007, RP11-115D7.1-008, RP11-115D7.1-010, RP11-115D7.1-011, RP11-115D7.1-012, RP11-115D7.1-016 and RP11-115D7.1-017
ENST00000417287.5	QC splicing correct
ENST00000417287.5	alternative 5' UTR
ENST00000424977.1	alternative 5' UTR
ENST00000424977.1	alternative 5'UTR; shares CDS with RP11-115D7.1-001, RP11-115D7.1-002, RP11-115D7.1-003, RP11-115D7.1-007, RP11-115D7.1-008, RP11-115D7.1-010, RP11-115D7.1-011, RP11-115D7.1-012, RP11-115D7.1-016 and RP11-115D7.1-018
ENST00000446031.1	alternative 5' UTR
ENST00000446031.1	alternative 5'UTR; shares CDS with RP11-115D7.1-001, RP11-115D7.1-002, RP11-115D7.1-003, RP11-115D7.1-007, RP11-115D7.1-008, RP11-115D7.1-010, RP11-115D7.1-011, RP11-115D7.1-012, RP11-115D7.1-017 and RP11-115D7.1-018
ENST00000479759.5	novel transcript
ENST00000461993.1	novel transcript
ENST00000494114.1	novel transcript
ENST00000530076.6	CAGE supported TSS
ENST00000642050.2	MANE_select
ENST00000433473.8	NAGNAG splice site
ENST00000641691.1	alternative 3' UTR
ENST00000449045.7	NP_001136076.1
ENST00000529905.5	QC splicing correct
ENST00000372771.5	MANE_select
ENST00000468258.1	novel transcript
ENST00000372766.4	MANE_select
ENST00000372759.4	MANE_select
ENST00000372748.8	MANE_select
ENST00000427563.1	NMD likely if extended
ENST00000417105.6	CAGE supported TSS
ENST00000642679.1	CAGE supported TSS
ENST00000435168.6	QC splicing correct
ENST00000372718.8	MANE_select
ENST00000469416.1	novel transcript
ENST00000484445.5	novel transcript
ENST00000361584.5	MANE_select
ENST00000361584.5	genebuild_only_MANE
ENST00000372706.6	MANE_select
ENST00000372706.6	alternative 5' UTR
ENST00000372706.6	alternative 5' UTR; shares CDS with RP11-656D10.2-002
ENST00000372705.3	FLJ16030
ENST00000372705.3	alternative 5' UTR
ENST00000372705.3	alternative 5' UTR; shares CDS with RP11-656D10.2-001
ENST00000482712.1	novel transcript
ENST00000358527.6	alternative 5' UTR
ENST00000358527.6	alternative 5' UTR; shares CDS with RP11-656D10.4-001,RP11-656D10.4-002, RP11-656D10.4-004, RP11-656D10.4-005, RP11-656D10.4-006, RP11-656D10.4-007, RP11-656D10.4-008 and RP11-656D10.4-009
ENST00000372703.1	alternative 5' UTR
ENST00000372703.1	alternative 5' UTR; shares CDS with RP11-656D10.4-001,RP11-656D10.4-003, RP11-656D10.4-004, RP11-656D10.4-005, RP11-656D10.4-006, RP11-656D10.4-007, RP11-656D10.4-008 and RP11-656D10.4-009
ENST00000420209.1	alternative 5' UTR
ENST00000420209.1	alternative 5' UTR; shares CDS with RP11-656D10.4-001,RP11-656D10.4-002, RP11-656D10.4-003, RP11-656D10.4-005, RP11-656D10.4-006, RP11-656D10.4-007, RP11-656D10.4-008 and RP11-656D10.4-009
ENST00000296380.8	FLJ21144
ENST00000296380.8	alternative 5' UTR
ENST00000296380.8	alternative 5' UTR; shares CDS with RP11-656D10.4-002,RP11-656D10.4-003, RP11-656D10.4-004, RP11-656D10.4-005, RP11-656D10.4-006, RP11-656D10.4-007, RP11-656D10.4-008 and RP11-656D10.4-009
ENST00000432259.5	alternative 5' UTR
ENST00000432259.5	alternative 5' UTR; shares CDS with RP11-656D10.4-001,RP11-656D10.4-002, RP11-656D10.4-003, RP11-656D10.4-004, RP11-656D10.4-006, RP11-656D10.4-007, RP11-656D10.4-008 and RP11-656D10.4-009
ENST00000418186.1	alternative 5' UTR
ENST00000418186.1	alternative 5' UTR; shares CDS with RP11-656D10.4-001,RP11-656D10.4-002, RP11-656D10.4-003, RP11-656D10.4-004, RP11-656D10.4-005, RP11-656D10.4-007, RP11-656D10.4-008 and RP11-656D10.4-009
ENST00000415550.5	alternative 5' UTR
ENST00000415550.5	alternative 5' UTR; shares CDS with RP11-656D10.4-001,RP11-656D10.4-002, RP11-656D10.4-003, RP11-656D10.4-004, RP11-656D10.4-005, RP11-656D10.4-006, RP11-656D10.4-008 and RP11-656D10.4-009
ENST00000443729.5	alternative 5' UTR
ENST00000443729.5	alternative 5' UTR; shares CDS with RP11-656D10.4-001,RP11-656D10.4-002, RP11-656D10.4-003, RP11-656D10.4-004, RP11-656D10.4-005, RP11-656D10.4-006, RP11-656D10.4-007 and RP11-656D10.4-009
ENST00000419161.1	alternative 5' UTR
ENST00000419161.1	alternative 5' UTR; shares CDS with RP11-656D10.4-001,RP11-656D10.4-002, RP11-656D10.4-003, RP11-656D10.4-004, RP11-656D10.4-005, RP11-656D10.4-006, RP11-656D10.4-007 and RP11-656D10.4-008
ENST00000471429.1	novel transcript
ENST00000648542.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000372699.8	FLJ36753
ENST00000372699.8	MANE_select
ENST00000465152.1	novel transcript
ENST00000493756.1	novel transcript
ENST00000472043.1	novel transcript
ENST00000666986.1	Assembled from SLRseq reads (SRP049776)
ENST00000372684.8	MANE_select
ENST00000372684.8	alternative 5' UTR
ENST00000372684.8	alternative 5' UTR; shares CDS with RP4-739H11.2-002
ENST00000372683.1	alternative 5' UTR
ENST00000372683.1	alternative 5' UTR; shares CDS with RP4-739H11.2-001
ENST00000658681.1	Assembled from SLRseq reads (SRP049776)
ENST00000427410.6	NP_001136061.1
ENST00000425457.6	NP_001136060.1
ENST00000453631.5	alternative 5' UTR
ENST00000456393.6	NP_001136059.1
ENST00000372654.5	alternative 5' UTR
ENST00000534399.5	alternative 5' UTR
ENST00000372653.5	QC splicing correct
ENST00000372651.5	alternative 5' UTR
ENST00000531464.5	alternative 5' UTR
ENST00000440226.7	QC splicing correct
ENST00000440226.7	alternative 5' UTR
ENST00000530965.5	QC splicing correct
ENST00000414185.1	non-canonical donor splice site between exons 4 & 5
ENST00000347132.10	LR annotation
ENST00000347132.10	MANE_select
ENST00000506017.1	QC splicing correct
ENST00000372638.4	MANE_select
ENST00000653821.1	Assembled from SLRseq reads (SRP049776)
ENST00000650070.2	CAGE supported TSS
ENST00000650070.2	LR annotation
ENST00000650070.2	MANE_select
ENST00000649124.1	alternative 5' UTR
ENST00000470271.5	alternative 5' UTR
ENST00000475060.1	QC splicing correct
ENST00000372616.1	CAGE supported TSS
ENST00000372616.1	alternative 5' UTR
ENST00000649215.1	CAGE supported TSS
ENST00000302946.12	QC splicing correct
ENST00000359345.5	alternative 5' UTR
ENST00000472037.5	alternative 3' UTR
ENST00000456518.3	NP_001165693.1
ENST00000657314.1	Assembled from SLRseq reads (SRP049776)
ENST00000670398.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662236.1	CAGE supported TSS
ENST00000372591.1	a genome sequencing error within exon 2 of this transcript prevents correct translation
ENST00000372591.1	confirm experimentally
ENST00000372591.1	sequence error
ENST00000372587.5	MANE_select
ENST00000643665.1	alternative 5' UTR
ENST00000372584.5	alternative 5' UTR
ENST00000372583.6	MANE_select
ENST00000460604.1	FLJ16752\n\
ENST00000670076.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000372581.2	MANE_select
ENST00000357001.3	MANE_select
ENST00000372572.5	alternative 5' UTR
ENST00000372573.5	KIAA1041
ENST00000361346.6	MANE_select
ENST00000361346.6	genebuild_only_MANE
ENST00000436207.2	non canonical TEC
ENST00000431473.4	MANE_select
ENST00000431473.4	MGC47816
ENST00000372565.8	MANE_select
ENST00000475426.1	novel transcript
ENST00000461083.1	novel transcript
ENST00000372561.4	MANE_select
ENST00000472013.1	novel transcript
ENST00000471420.1	novel transcript
ENST00000482168.1	novel transcript
ENST00000469615.1	novel transcript
ENST00000654683.1	alternative 5' UTR
ENST00000468651.2	novel transcript
ENST00000655164.1	alternative 5' UTR
ENST00000668663.1	alternative 5' UTR
ENST00000660083.1	alternative 5' UTR
ENST00000658812.1	alternative 3' UTR
ENST00000655845.1	alternative 5' UTR
ENST00000655447.1	QC splicing correct
ENST00000664418.1	alternative 3' UTR
ENST00000664418.1	alternative 5' UTR
ENST00000664192.1	alternative 3' UTR
ENST00000492422.1	novel transcript
ENST00000462063.1	novel transcript
ENST00000670292.1	alternative 5' UTR
ENST00000340612.6	alternative 5' UTR
ENST00000471699.2	novel transcript
ENST00000454425.2	DC2 pseudogene
ENST00000677900.1	align_id:1282071|asmbl_1974
ENST00000678038.1	align_id:1282073|asmbl_1976
ENST00000372550.6	align_id:1282072|asmbl_1975
ENST00000676675.1	align_id:3516292|asmbl_6457
ENST00000678193.1	align_id:3516311|asmbl_6476
ENST00000304979.8	MANE_select
ENST00000678803.1	align_id:3516263|asmbl_6428
ENST00000677926.1	align_id:3516316|asmbl_6481
ENST00000678333.1	align_id:3516310|asmbl_6475
ENST00000677307.1	align_id:1282069|asmbl_1972
ENST00000679245.1	align_id:1282070|asmbl_1973
ENST00000677356.1	align_id:1282068|asmbl_1971
ENST00000678308.1	align_id:3516283|asmbl_6448
ENST00000372549.1	NMD likely if extended
ENST00000678076.1	align_id:3516290|asmbl_6455
ENST00000677219.1	align_id:3516294|asmbl_6459
ENST00000677312.1	align_id:3516293|asmbl_6458
ENST00000649886.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000667389.1	Assembled from SLRseq reads (SRP049776)
ENST00000321358.12	MANE_select
ENST00000467957.1	novel transcript
ENST00000296387.6	MANE_select
ENST00000296388.10	MANE_select
ENST00000296388.10	NP_071751.3
ENST00000372525.7	MANE_select
ENST00000468913.2	QC splicing correct
ENST00000494155.1	novel transcript
ENST00000650521.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000372522.5	alternative 5' UTR
ENST00000372521.9	LOC374969
ENST00000372521.9	MANE_select
ENST00000497437.1	novel transcript
ENST00000645239.1	alternative 5' UTR
ENST00000372517.8	MANE_select
ENST00000470938.1	novel transcript
ENST00000372514.7	alternative 5' UTR
ENST00000659750.1	Assembled from SLRseq reads (SRP049776)
ENST00000416809.2	QC splicing correct
ENST00000372508.7	LOC51058
ENST00000651192.1	MANE_select
ENST00000651192.1	genebuild_only_MANE
ENST00000372507.5	alternative 5' UTR
ENST00000372506.5	alternative 5' UTR
ENST00000426263.10	CAGE supported TSS
ENST00000426263.10	LR annotation
ENST00000426263.10	MANE_select
ENST00000653200.1	Assembled from SLRseq reads (SRP049776)
ENST00000664148.1	Assembled from SLRseq reads (SRP049776)
ENST00000658437.1	Assembled from SLRseq reads (SRP049776)
ENST00000335282.5	MANE_select
ENST00000335282.5	confirm experimentally
ENST00000236051.3	MANE_select
ENST00000463906.1	this variant and one or more of variant fragments RP5-1034F7.2-005 through 008 could be part of a single variant.
ENST00000491223.5	this variant and one of variant fragments RP5-1034F7.2-007 or 008 could be part of a single variant.
ENST00000472982.5	this variant and one of variant fragments RP5-1034F7.2-007 or 008 could be part of a single variant.
ENST00000483082.1	this variant and one or more of variant fragments RP5-1034F7.2-002, 007 and 008 could be part of a single variant.
ENST00000474566.1	this variant and one or more of variant fragments RP5-1034F7.2-002 through 004 and 006 could be part of a single variant.
ENST00000528956.5	FLJ32000
ENST00000372492.9	MANE_select
ENST00000529956.5	alternative 5' UTR
ENST00000439858.6	MANE_select
ENST00000432792.6	alternative 5' UTR
ENST00000442284.1	this variant and variant fragment RP11-282K6.4-004 could be part of a single variant.
ENST00000456751.1	alternative 5' UTR
ENST00000523677.6	MANE_select
ENST00000423420.1	alternative 5' UTR
ENST00000372476.8	MANE_select
ENST00000485125.1	this variant and one or more of variant fragments RP11-282K6.6-005 through 010 could be part of a single variant
ENST00000480269.1	this variant and one or more of variant fragments RP11-282K6.6-004, 006 through 010 could be part of a single variant.
ENST00000488437.1	this variant and one or more of variant fragments RP11-282K6.6-004, 005 and 007 through 010 could be part of a single variant.
ENST00000471187.1	this variant and one or more of variant fragments RP11-282K6.6-004 through 006 and 009, 010 could be part of a single variant
ENST00000461061.1	this variant and one or more of variant fragments RP11-282K6.6-004 through 006 and 009, 010 could be part of a single variant
ENST00000492599.1	this variant and one or more of variant fragments RP11-282K6.6-004 through 008 and 010 could be part of a single variant.
ENST00000492874.1	this variant and one or more of variant fragments RP11-282K6.6-004 through 009 could be part of a single variant.
ENST00000372470.9	CAGE supported TSS
ENST00000372470.9	MANE_select
ENST00000671634.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000310955.11	MANE_select
ENST00000372462.1	alternative 5' UTR
ENST00000372462.1	alternatively spliced 5' UTR, shares CDS with RP1-92O14.2-001
ENST00000478882.1	this variant and variant fragment RP1-92O14.2-004 could be part of a single variant.
ENST00000482046.1	this variant and variant fragment RP1-92O14.2-003 could be part of a single variant.
ENST00000372458.8	MANE_select
ENST00000468865.6	QC splicing correct
ENST00000470968.6	QC splicing correct
ENST00000372457.9	MANE_select
ENST00000290663.10	NP_443109
ENST00000562955.2	NP_056099.3
ENST00000562955.2	confirm experimentally
ENST00000634258.3	MANE_select
ENST00000639852.1	NMD likely if extended
ENST00000372430.9	MANE_select
ENST00000483618.1	novel transcript
ENST00000496043.5	this variant and one or more of variant fragments RP5-1029K14.1-005 through 008, 011 and 012 could be part of a single variant.
ENST00000481019.5	this variant and one or more of variant fragments RP5-1029K14.1-005 through 008, 011 and 012 could be part of a single variant.
ENST00000359947.9	MANE_select
ENST00000467464.1	this variant and one or more of variant fragments RP5-1029K14.1-005 through 010 and 012 could be part of a single variant.
ENST00000414879.5	FLJ43335
ENST00000496447.5	this variant and one or more of variant fragments RP5-1029K14.1-009 through 011 could be part of a single variant.
ENST00000372407.4	FLJ45062
ENST00000463041.1	this variant and one or more of variant fragments RP5-1029K14.1-007 and 009 through 011 could be part of a single variant.
ENST00000477970.1	FLJ45567
ENST00000477970.1	this variant and one or more of variant fragments RP5-1029K14.1-007 through 012 could be part of a single variant.
ENST00000372396.4	MANE_select
ENST00000463151.5	alternative 5' UTR
ENST00000663424.1	Assembled from SLRseq reads (SRP049776)
ENST00000659644.1	Assembled from SLRseq reads (SRP049776)
ENST00000532911.6	alternative 3' UTR
ENST00000532911.6	alternative 5' UTR
ENST00000646096.1	alternative 3' UTR
ENST00000646096.1	alternative 5' UTR
ENST00000347631.8	MANE_select
ENST00000646109.1	alternative 5' UTR
ENST00000645640.1	alternative 3' UTR
ENST00000646971.1	alternative 5' UTR
ENST00000645142.1	alternative 3' UTR
ENST00000642504.1	alternative 3' UTR
ENST00000645165.1	alternative 3' UTR
ENST00000644195.1	alternative 5' UTR
ENST00000531993.6	NP_001257391.1
ENST00000461375.2	NMD likely if extended
ENST00000642780.1	alternative 3' UTR
ENST00000645161.1	484882     484974
ENST00000477048.5	alternative 5' UTR
ENST00000471394.6	alternative 5' UTR
ENST00000372359.10	MANE_select
ENST00000491846.5	alternative 5' UTR
ENST00000474592.1	alternative 5' UTR
ENST00000372354.3	alternative 5' UTR
ENST00000372343.8	MANE_select
ENST00000372339.3	FLJ34246
ENST00000647729.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000471934.1	NMD candidate
ENST00000255108.8	MANE_select
ENST00000396758.6	NP_001034678.1
ENST00000532140.1	QC splicing correct
ENST00000527319.1	QC splicing correct
ENST00000472505.6	alternative 5' UTR
ENST00000236067.8	NP_001034546.1
ENST00000472174.7	MANE_select
ENST00000498664.1	alternative 5' UTR
ENST00000498543.1	alternative 5' UTR
ENST00000434555.7	alternative 5' UTR
ENST00000372324.6	MANE_select
ENST00000372324.6	NP_001005417.1
ENST00000372324.6	alternative 5' UTR
ENST00000356836.10	NP_001005417.1
ENST00000309519.8	Evidence: EST DC386748.1 and mRNA AK293418.1
ENST00000309519.8	NP_085076.2
ENST00000486064.5	novel transcript (FLJ35250)
ENST00000372318.8	MANE_select
ENST00000372318.8	MGC45441
ENST00000463846.5	novel transcript
ENST00000490563.5	novel transcript
ENST00000490064.5	novel transcript
ENST00000486504.5	novel transcript
ENST00000485811.5	novel transcript
ENST00000466180.1	novel transcript
ENST00000479055.5	QC splicing correct
ENST00000479055.5	non canonical TEC
ENST00000472562.1	novel transcript
ENST00000372310.8	MANE_select
ENST00000360584.6	NP_008865.2
ENST00000528803.1	alternative 5' UTR
ENST00000657086.1	Assembled from SLRseq reads (SRP049776)
ENST00000656061.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000431800.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000616338.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000453688.5	QC splicing correct
ENST00000447959.1	QC splicing correct
ENST00000609027.1	454 RNA-Seq supported
ENST00000372299.4	FLJ40160
ENST00000372299.4	MANE_select
ENST00000476802.1	novel transcript
ENST00000634670.1	MANE_select
ENST00000361745.10	FLJ11543 and DKFZp564C0464
ENST00000361745.10	non-canonical splice donor site between exons 3 and 4
ENST00000372289.7	MANE_select
ENST00000315913.9	KIAA1425
ENST00000488433.5	FLJ35579, DKFZp686L09142, FLJ38933, FLJ30392
ENST00000372259.9	QC splicing correct
ENST00000372257.7	MANE_select
ENST00000649995.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000355387.6	FLJ31862, FLJ22091, FLJ10597
ENST00000355387.6	non-canonical splice donor site between exons 10 and 11
ENST00000361799.7	MANE_select
ENST00000361799.7	alternative 5' UTR
ENST00000487332.1	novel transcript
ENST00000470498.1	novel transcript
ENST00000496262.1	novel transcript
ENST00000474064.5	novel transcript FLJ10597
ENST00000471494.5	novel transcript
ENST00000497469.5	novel transcript
ENST00000475378.5	novel transcript
ENST00000484745.5	QC splicing correct
ENST00000474394.5	novel transcript
ENST00000480686.5	novel transcript FLJ42800
ENST00000474956.1	novel transcript FLJ42648
ENST00000495630.1	novel transcript
ENST00000476724.1	novel transcript DKFZp547P2316
ENST00000468117.1	novel transcript
ENST00000372237.8	FLJ22353
ENST00000372237.8	MANE_select
ENST00000418644.5	alternative 5' UTR
ENST00000535358.6	MANE_select
ENST00000535358.6	genebuild_only_MANE
ENST00000441519.5	alternative 5' UTR
ENST00000445071.5	alternative 5' UTR
ENST00000648290.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000453711.1	alternative 5' UTR
ENST00000372224.9	MANE_select
ENST00000396651.8	MANE_select
ENST00000372207.4	MANE_select
ENST00000372201.5	MANE_select
ENST00000339355.3	MANE_select
ENST00000485668.5	FLJ31588
ENST00000372192.4	MANE_select
ENST00000360403.7	MANE_select
ENST00000372183.7	DKFZp667G0511
ENST00000477953.5	QC splicing correct
ENST00000497010.1	QC splicing correct
ENST00000486132.5	novel transcript FLJ34264
ENST00000372168.7	FLJ32311
ENST00000372172.5	FLJ31983
ENST00000372172.5	MANE_select
ENST00000486296.5	novel transcript
ENST00000466423.5	novel transcript
ENST00000487488.5	novel transcript
ENST00000484564.1	novel transcript
ENST00000652165.1	alternative 5' UTR
ENST00000650713.1	alternative 5' UTR
ENST00000494399.5	DKFZp686O11196
ENST00000246337.9	CAGE supported TSS
ENST00000246337.9	LR annotation
ENST00000246337.9	MANE_select
ENST00000359600.6	KIAA1511
ENST00000359600.6	MANE_select
ENST00000334815.5	MANE_select
ENST00000529984.5	alternative 5' UTR
ENST00000456914.7	MANE_select
ENST00000456914.7	alternative 5' UTR
ENST00000355498.6	alternative 5' UTR
ENST00000531105.5	QC splicing correct
ENST00000529892.5	QC splicing correct
ENST00000533178.5	QC splicing correct
ENST00000673134.1	alternative 5' UTR
ENST00000672314.1	alternative 5' UTR
ENST00000672593.1	alternative 5' UTR
ENST00000672764.1	alternative 5' UTR
ENST00000435155.1	alternative 5' UTR
ENST00000671856.1	NMD likely if extended
ENST00000372090.6	MANE_select
ENST00000372086.4	MANE_select
ENST00000486676.5	QC splicing correct
ENST00000629482.3	MANE_select
ENST00000401061.9	MANE_select
ENST00000447184.6	variant 2; alternatively spliced in 5' UTR
ENST00000319248.13	MANE_select
ENST00000434299.5	alternative 5' UTR
ENST00000351829.9	MANE_select
ENST00000351829.9	alternative 5' UTR
ENST00000351829.9	variant 2; alternatively spliced in 5' UTR
ENST00000481885.5	QC splicing correct
ENST00000481885.5	non canonical TEC
ENST00000437901.6	alternative 5' UTR
ENST00000350030.8	MANE_select
ENST00000531612.5	QC splicing correct
ENST00000528266.6	MANE_select
ENST00000464739.5	NMD likely if extended
ENST00000464739.5	QC splicing correct
ENST00000479235.5	novel transcript FLJ23559
ENST00000355105.8	MANE_select
ENST00000355105.8	genebuild_only_MANE
ENST00000290795.7	DKFZp434H1428, FLJ21319
ENST00000487436.1	novel transcript
ENST00000498128.1	novel transcript
ENST00000496278.1	novel transcript
ENST00000495616.1	novel transcript
ENST00000488278.5	novel transcript
ENST00000480941.1	novel transcript
ENST00000480083.5	novel transcript
ENST00000493083.5	novel transcript
ENST00000460859.1	novel transcript
ENST00000372025.5	FLJ21029
ENST00000372025.5	MANE_select
ENST00000496366.1	novel transcript
ENST00000396478.4	MANE_select
ENST00000470809.1	novel transcript
ENST00000361297.7	MANE_select
ENST00000674079.1	CAGE supported TSS
ENST00000262741.10	MANE_select
ENST00000262741.10	alternative 5' UTR
ENST00000425892.2	alternative 5' UTR
ENST00000540385.2	LOC110117498-PIK3R3 readthrough
ENST00000452785.2	QC splicing correct
ENST00000498443.5	novel transcript
ENST00000372003.6	MANE_select
ENST00000482928.5	novel transcript
ENST00000469330.5	novel transcript
ENST00000475163.5	novel transcript
ENST00000482143.5	novel transcript
ENST00000464786.5	novel transcript
ENST00000472170.1	novel transcript
ENST00000470318.1	novel transcript
ENST00000506599.2	MANE_select
ENST00000371984.8	FLJ20277
ENST00000371984.8	MANE_select
ENST00000371992.1	FLJ31624
ENST00000475642.1	novel transcript
ENST00000480972.1	novel transcript
ENST00000485714.1	novel transcript (FLJ30739)
ENST00000463030.1	novel transcript
ENST00000497439.5	novel transcript
ENST00000489985.1	novel transcript (FLJ22777)
ENST00000371980.4	FLJ25163
ENST00000371980.4	MANE_select
ENST00000669994.1	alternative 5' UTR
ENST00000371975.9	LR annotation
ENST00000371975.9	MANE_select
ENST00000469835.6	alternative 5' UTR
ENST00000487700.1	QC splicing correct
ENST00000487700.1	non canonical TEC
ENST00000472889.2	NAGNAG splice site
ENST00000496156.5	novel transcript
ENST00000617190.5	MANE_select
ENST00000615587.4	CAGE supported TSS
ENST00000472710.2	novel transcript (FLJ43839)
ENST00000498402.2	non canonical conserved
ENST00000469150.1	novel transcript
ENST00000311672.10	MANE_select
ENST00000486951.1	this variant and variant fragment RP4-603I14.1-004 could be part of a single variant
ENST00000460947.1	this variant and variant fragment RP4-603I14.1-003 could be part of a single variant
ENST00000474844.5	MGC22960
ENST00000307089.7	novel transcript
ENST00000486270.5	novel transcript
ENST00000469918.5	novel transcript
ENST00000537428.2	novel transcript (FLJ32858)
ENST00000498008.5	NMD exception
ENST00000495427.1	NMD exception
ENST00000495427.1	novel transcript (FLJ40205)
ENST00000475281.1	novel transcript
ENST00000243167.9	MANE_select
ENST00000468718.5	NMD likely if extended
ENST00000468718.5	this variant and one or more of variant fragments RP4-603I14.2-002, 005 and 006 could be part of a single variant
ENST00000493735.5	this variant and variant fragment RP4-603I14.4-006 could be part of a single variant
ENST00000484697.5	this variant and variant fragment RP4-603I14.4-003 could be part of a single variant
ENST00000489366.2	this variant and one or more of variant fragments RP4-603I14.2-003 and 006 could be part of a single variant
ENST00000493636.1	this variant and one or more of variant fragments RP4-603I14.2-003, 004 and 005 could be part of a single variant
ENST00000634819.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663451.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656737.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000360032.4	MANE_select
ENST00000657773.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000481882.7	MANE_select
ENST00000481882.7	QC splicing correct
ENST00000294445.7	FLJ32011
ENST00000524908.1	non canonical TEC
ENST00000396314.3	NP_001091080.1
ENST00000371945.10	MANE_select
ENST00000371945.10	upstream ATG
ENST00000371946.9	upstream ATG
ENST00000428112.7	upstream ATG
ENST00000496619.6	alternative 5' UTR
ENST00000496619.6	upstream ATG
ENST00000529170.6	alternative 5' UTR
ENST00000529170.6	upstream ATG
ENST00000531769.6	alternative 5' UTR
ENST00000531769.6	upstream ATG
ENST00000465783.6	upstream ATG
ENST00000474868.2	alternative 5' UTR
ENST00000319928.8	align_id:3517554|asmbl_7719
ENST00000319928.8	novel transcript
ENST00000271139.13	NP_660322.2
ENST00000271139.13	upstream ATG
ENST00000371940.1	upstream ATG
ENST00000574428.5	CAGE supported TSS
ENST00000334122.5	MANE_select
ENST00000674268.1	Assembled from SLRseq reads (SRP049776)
ENST00000371933.8	KIAA0494
ENST00000371933.8	MANE_select
ENST00000672422.2	CAGE supported TSS
ENST00000481623.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000481623.2	Assembled from SLRseq reads (SRP049776)
ENST00000479745.6	Assembled from SLRseq reads (SRP049776)
ENST00000674435.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674435.1	Assembled from SLRseq reads (SRP049776)
ENST00000674435.1	novel transcript
ENST00000674495.1	Assembled from SLRseq reads (SRP049776)
ENST00000674263.1	Assembled from SLRseq reads (SRP049776)
ENST00000459797.2	Assembled from SLRseq reads (SRP049776)
ENST00000459797.2	novel transcript
ENST00000674415.1	Assembled from SLRseq reads (SRP049776)
ENST00000484461.2	Assembled from SLRseq reads (SRP049776)
ENST00000484461.2	novel transcript
ENST00000674302.1	Assembled from SLRseq reads (SRP049776)
ENST00000674331.1	Assembled from SLRseq reads (SRP049776)
ENST00000271153.8	NP_000770.2
ENST00000371923.9	MANE_select
ENST00000310638.9	MANE_select
ENST00000465874.5	QC splicing correct
ENST00000465874.5	non canonical TEC
ENST00000371901.4	MANE_select
ENST00000466294.1	novel transcript
ENST00000334194.4	MANE_select
ENST00000471598.1	novel transcript
ENST00000444042.2	non canonical TEC
ENST00000371891.8	LOC284541
ENST00000371891.8	MANE_select
ENST00000294338.7	MANE_select
ENST00000491793.1	novel transcript
ENST00000371885.1	alternative 5' UTR
ENST00000294339.3	alternative 5' UTR
ENST00000459729.1	novel transcript
ENST00000464796.5	novel transcript
ENST00000481091.1	novel transcript
ENST00000465912.1	novel transcript
ENST00000371877.8	CAGE supported TSS
ENST00000371877.8	MANE_select
ENST00000335071.4	MANE_select
ENST00000445551.1	MGC12982
ENST00000334793.6	MANE_select
ENST00000454285.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000606738.3	MANE_select
ENST00000236495.9	LOC200010
ENST00000236495.9	NP_001128653.1
ENST00000438567.7	MANE_select
ENST00000371847.8	MANE_select
ENST00000471975.2	NMD likely if extended
ENST00000371839.6	FLJ37507
ENST00000371839.6	MANE_select
ENST00000416121.5	FLJ14442
ENST00000497451.1	novel transcript
ENST00000671560.1	Assembled from SLRseq reads (SRP049776)
ENST00000371833.4	FLJ11588
ENST00000371833.4	MANE_select
ENST00000463562.1	novel transcript
ENST00000476096.1	QC splicing correct
ENST00000480399.1	novel transcript
ENST00000663662.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000357083.8	NP_001138247.2
ENST00000650764.1	m150417_220124_42137_c100813522550000001823175210081550_s1_p0_107881_ccs
ENST00000494555.2	alternative 5' UTR
ENST00000371824.7	CAGE supported TSS
ENST00000371824.7	LR annotation
ENST00000371824.7	MANE_select
ENST00000371821.6	CAGE supported TSS
ENST00000371821.6	LR annotation
ENST00000661441.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000404795.4	MANE_select
ENST00000404795.4	alternative 5' UTR
ENST00000396153.7	MANE_select
ENST00000262662.5	alternative 5' UTR
ENST00000396148.2	CAGE supported TSS
ENST00000396148.2	LR annotation
ENST00000396148.2	alternative 5' UTR
ENST00000371761.4	MANE_select
ENST00000648827.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000371759.7	FLJ27485
ENST00000371759.7	MANE_select
ENST00000467127.5	non canonical TEC
ENST00000467127.5	novel transcript
ENST00000474016.1	novel transcript
ENST00000242719.4	MANE_select
ENST00000680483.1	MANE_select
ENST00000680290.1	alternative 5' UTR
ENST00000680290.1	upstream ATG
ENST00000371750.9	NP_001073963.1
ENST00000525906.1	alternative 5' UTR
ENST00000371733.8	MANE_select
ENST00000422197.2	3' end CDS is missing
ENST00000428468.6	MANE_select
ENST00000453295.5	NP_683704.2
ENST00000532975.5	alternative 5' UTR
ENST00000527631.5	alternative 5' UTR
ENST00000531828.5	NP_683704.1
ENST00000531828.5	confirm experimentally
ENST00000481937.5	alternative 5' UTR
ENST00000486942.5	alternative 5' UTR
ENST00000440943.5	QC splicing correct
ENST00000352171.12	MANE_select
ENST00000371655.4	MANE_select
ENST00000469458.5	non canonical TEC
ENST00000371626.9	MANE_select
ENST00000472624.5	novel transcript
ENST00000610127.2	Partially supported by SLRseq reads (ENA:SRP049776)
ENST00000648686.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000371614.2	MANE_select
ENST00000477828.6	QC splicing correct
ENST00000313334.13	MANE_select
ENST00000472944.6	NP_001129969.1
ENST00000287727.8	MANE_select
ENST00000287727.8	alternative 5' UTR
ENST00000470844.5	novel transcript
ENST00000284376.8	MANE_select
ENST00000460261.5	novel transcript
ENST00000450942.2	QC splicing correct
ENST00000494789.1	novel transcript
ENST00000661897.1	Assembled from SLRseq reads (SRP049776)
ENST00000371568.8	MANE_select
ENST00000371566.1	NAGNAG splice site
ENST00000371566.1	alternative 5' UTR
ENST00000257181.10	FLJ34719
ENST00000257181.10	MANE_select
ENST00000487160.1	novel transcript
ENST00000474048.1	novel transcript
ENST00000257177.9	MANE_select
ENST00000257177.9	NP_001009881.1
ENST00000469810.1	QC splicing correct
ENST00000469810.1	non canonical TEC
ENST00000470626.1	QC splicing correct
ENST00000470626.1	alternative 5' UTR
ENST00000470626.1	non canonical TEC
ENST00000524582.1	alternative 5' UTR
ENST00000361314.5	MANE_select
ENST00000459779.1	novel transcript
ENST00000517870.2	MANE_select
ENST00000440303.5	FLJ46370
ENST00000401050.7	MGC52498
ENST00000371538.5	FLJ12439
ENST00000371538.5	MANE_select
ENST00000294353.7	FLJ13456
ENST00000294353.7	MANE_select
ENST00000371528.2	MANE_select
ENST00000446786.2	QC splicing correct
ENST00000371522.9	MANE_select
ENST00000358358.9	FLJ10948
ENST00000476477.6	alternative 5' UTR
ENST00000479593.5	novel transcript
ENST00000487866.5	novel transcript
ENST00000487851.5	novel transcript
ENST00000488268.5	novel transcript
ENST00000544365.5	alternative 5' UTR
ENST00000495920.5	novel transcript
ENST00000492992.1	novel transcript
ENST00000493896.2	novel transcript
ENST00000371514.8	MANE_select
ENST00000371513.9	NP_001007099.1
ENST00000528809.1	QC splicing correct
ENST00000529363.2	not organism-supported
ENST00000533119.1	QC splicing correct
ENST00000312553.10	MANE_select
ENST00000312553.10	upstream ATG
ENST00000471210.1	this variant and one of variant fragments RP11-334A14.4-003 or 004 could be part of a single variant.
ENST00000471285.1	this variant variant fragment RP11-334A14.4-002 could be part of a single variant.
ENST00000490650.1	QC splicing correct
ENST00000490650.1	non canonical TEC
ENST00000371494.9	MANE_select
ENST00000620347.5	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000371486.4	MANE_select
ENST00000294360.5	FLJ20580
ENST00000294360.5	MANE_select
ENST00000483739.5	novel transcript (FLJ35415)
ENST00000470385.5	novel transcript
ENST00000478839.1	novel transcript (FLJ37052)
ENST00000489755.1	novel transcript
ENST00000371470.8	MANE_select
ENST00000458151.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000458151.2	Assembled from SLRseq reads (SRP049776)
ENST00000655937.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664677.1	Assembled from SLRseq reads (SRP049776)
ENST00000306052.12	MANE_select
ENST00000653810.1	QC splicing correct
ENST00000529670.6	alternative 3' UTR
ENST00000658404.1	FLJ39163
ENST00000347547.7	QC splicing correct
ENST00000347547.7	confirm experimentally
ENST00000459674.5	FLJ16536
ENST00000445039.2	QC splicing correct
ENST00000647620.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000669809.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000563752.5	QC splicing correct
ENST00000371445.3	MANE_select
ENST00000371429.4	MANE_select
ENST00000072644.7	MANE_select
ENST00000361921.8	MANE_select
ENST00000194214.10	MANE_select
ENST00000371368.5	Alternatively spliced 5' UTR, shares CDS with RP1-167A19.4-001 (partial).
ENST00000371368.5	alternative 5' UTR
ENST00000371370.8	Alternatively spliced 5' UTR, shares CDS with RP1-167A19.4-001.
ENST00000371370.8	MANE_select
ENST00000371370.8	alternative 5' UTR
ENST00000444987.1	Alternatively spliced 5' UTR, shares CDS with RP1-167A19.4-001 (partial).
ENST00000444987.1	alternative 5' UTR
ENST00000371360.2	MANE_select
ENST00000234831.10	MANE_select
ENST00000624679.1	confirm experimentally
ENST00000648983.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000234827.6	MANE_select
ENST00000534324.5	NP_001026842.2
ENST00000360840.9	MANE_select
ENST00000490670.1	novel transcript
ENST00000528930.6	align_id:3518526|asmbl_8691
ENST00000371320.8	align_id:3518527|asmbl_8692
ENST00000447150.1	QC splicing correct
ENST00000664270.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000481208.5	novel transcript
ENST00000498228.1	novel transcript
ENST00000343744.7	MANE_select
ENST00000343744.7	isoform BFIT2
ENST00000371316.3	isoform BFIT1
ENST00000479837.1	novel transcript
ENST00000302250.7	MANE_select
ENST00000371304.2	QC splicing correct
ENST00000371304.2	non canonical TEC
ENST00000421030.7	MANE_select
ENST00000478097.1	novel transcript
ENST00000371281.4	MANE_select
ENST00000371284.9	QC splicing correct
ENST00000371284.9	non canonical TEC
ENST00000486091.1	novel transcript
ENST00000371279.4	DKFZp727A071
ENST00000371279.4	MANE_select
ENST00000371276.9	MANE_select
ENST00000371274.8	FLJ20619
ENST00000358193.7	FLJ40201
ENST00000371269.9	LR annotation
ENST00000371269.9	MANE_select
ENST00000648712.1	NMD likely if extended
ENST00000436604.2	alternative 3' UTR
ENST00000648494.1	NMD likely if extended
ENST00000658428.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000371268.4	LOC199964
ENST00000371268.4	MANE_select
ENST00000651561.1	LR annotation
ENST00000651561.1	MANE_select
ENST00000673726.1	upstream ATG
ENST00000302118.5	LR annotation
ENST00000302118.5	MANE_select
ENST00000294383.7	MANE_select
ENST00000294383.7	QC splicing correct
ENST00000294383.7	confirm experimentally
ENST00000671349.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670738.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659410.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661225.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000671520.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648749.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000666111.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000458145.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671610.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665254.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000569425.3	QC splicing correct
ENST00000451914.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670778.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663880.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669154.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662108.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653637.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000371250.4	MANE_select
ENST00000371244.9	MANE_select
ENST00000343433.7	MANE_select
ENST00000493000.5	novel transcript
ENST00000497991.1	novel transcript
ENST00000484327.1	novel transcript
ENST00000371240.3	novel transcript
ENST00000361249.4	MANE_select
ENST00000371237.9	MANE_select
ENST00000371236.7	MANE_select
ENST00000585589.5	QC splicing correct
ENST00000608806.1	nested 454 RNA-Seq supported
ENST00000610197.1	nested 454 RNA-Seq supported
ENST00000432897.5	QC splicing correct
ENST00000667877.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000610175.1	nested 454 RNA-Seq supported
ENST00000608833.1	nested 454 RNA-Seq supported
ENST00000609323.1	nested 454 RNA-Seq supported
ENST00000421528.6	QC splicing correct
ENST00000371226.8	MANE_select
ENST00000456980.5	QC splicing correct
ENST00000482274.2	QC splicing correct
ENST00000482274.2	alternative 5' UTR
ENST00000654217.1	Assembled from SLRseq reads (SRP049776)
ENST00000371225.4	MANE_select
ENST00000493821.6	KIAA1915
ENST00000493821.6	novel transcript
ENST00000472487.6	LR annotation
ENST00000472487.6	MANE_select
ENST00000659108.1	novel transcript
ENST00000401044.7	novel transcript
ENST00000481973.1	putative novel tranascript
ENST00000483003.5	novel transcript
ENST00000489282.1	novel transcript
ENST00000371222.4	CCDS610.1
ENST00000371222.4	MANE_select
ENST00000653297.1	Assembled from SLRseq reads (SRP049776)
ENST00000649834.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000663144.1	Assembled from SLRseq reads (SRP049776)
ENST00000419531.3	Assembled from SLRseq reads (SRP049776)
ENST00000669294.1	Assembled from SLRseq reads (SRP049776)
ENST00000423408.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000423408.6	QC splicing correct
ENST00000669325.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660449.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660449.1	putative novel transcript
ENST00000427292.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653076.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662139.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665413.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662532.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438195.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656747.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662302.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670138.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659582.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665715.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655640.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000635515.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449812.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655635.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655635.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000653100.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660535.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659940.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659519.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660872.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665398.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654080.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662910.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000592607.5	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000585367.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000647858.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000671348.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665577.1	Assembled from SLRseq reads (SRP049776)
ENST00000582567.1	alternative 5' UTR
ENST00000413489.5	alternative 5' UTR
ENST00000474476.5	novel transcript
ENST00000462744.5	novel transcript
ENST00000495718.5	novel transcript
ENST00000303721.12	FLJ10986
ENST00000303721.12	MANE_select
ENST00000475949.5	novel transcript
ENST00000485720.1	novel transcript
ENST00000493891.5	novel transcript
ENST00000466791.5	novel transcript
ENST00000472783.5	novel transcript
ENST00000471169.5	novel transcript
ENST00000480847.1	novel transcript
ENST00000371208.5	MANE_select
ENST00000371204.4	MANE_select
ENST00000469406.6	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000486478.5	novel transcript
ENST00000371201.3	MANE_select
ENST00000488027.5	novel transcript
ENST00000456878.1	QC splicing correct
ENST00000659925.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661790.1	Assembled from SLRseq reads (SRP049776)
ENST00000635048.2	Assembled from SLRseq reads (SRP049776)
ENST00000668888.1	Assembled from SLRseq reads (SRP049776)
ENST00000657534.1	Assembled from SLRseq reads (SRP049776)
ENST00000662037.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654935.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660110.1	Assembled from SLRseq reads (SRP049776)
ENST00000660992.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665573.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665573.1	Assembled from SLRseq reads (SRP049776)
ENST00000671019.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671019.1	Assembled from SLRseq reads (SRP049776)
ENST00000671035.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662596.1	Assembled from SLRseq reads (SRP049776)
ENST00000661176.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661045.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662065.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670448.1	Assembled from SLRseq reads (SRP049776)
ENST00000654255.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656757.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663215.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668078.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666208.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668738.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000673767.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667862.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665290.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667362.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665662.1	Assembled from SLRseq reads (SRP049776)
ENST00000663928.1	Assembled from SLRseq reads (SRP049776)
ENST00000371191.5	QC splicing correct
ENST00000403491.8	MANE_select
ENST00000663597.1	CAGE supported TSS
ENST00000657234.1	CAGE supported TSS
ENST00000655770.1	CAGE supported TSS
ENST00000665665.1	Assembled from SLRseq reads (SRP049776)
ENST00000655960.1	Assembled from SLRseq reads (SRP049776)
ENST00000421455.2	Assembled from SLRseq reads (SRP049776)
ENST00000659508.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000606498.5	CAGE supported TSS
ENST00000606498.5	MANE_select
ENST00000606498.5	non canonical U12
ENST00000371180.6	non canonical U12
ENST00000371178.5	non canonical U12
ENST00000496465.1	CAGE supported TSS
ENST00000371177.2	CAGE supported TSS
ENST00000371177.2	non canonical U12
ENST00000642238.2	MANE_select
ENST00000484937.5	non-canonical acceptor splice site in final 3' UTR exon. Annotated due to presence in cDNA and est sequences
ENST00000635137.1	CAGE supported TSS
ENST00000498273.2	MANE_select
ENST00000371153.9	MANE_select
ENST00000452143.5	Alternaitively spliced 5' UTR, shares CDS with RP4-740B20.1-001 (partial)
ENST00000452143.5	alternative 5' UTR
ENST00000442679.5	Alternaitively spliced 5' UTR, shares CDS with RP4-740B20.1-001 (partial)
ENST00000442679.5	alternative 5' UTR
ENST00000339950.5	MANE_select
ENST00000251157.10	confirm experimentally
ENST00000635253.2	MANE_select
ENST00000635253.2	confirm experimentally
ENST00000340370.10	confirm experimentally
ENST00000634264.1	NP_001258929.1
ENST00000634264.1	confirm experimentally
ENST00000635123.1	NP_001258930.1
ENST00000635123.1	confirm experimentally
ENST00000637208.1	alternative 3' UTR
ENST00000371129.4	MANE_select
ENST00000317868.9	MANE_select
ENST00000443289.5	alternative 5' UTR
ENST00000371120.7	alternative 5' UTR
ENST00000371118.1	alternative 5' UTR
ENST00000420285.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420285.6	QC splicing correct
ENST00000663274.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427547.1	QC splicing correct
ENST00000669810.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666431.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656075.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662017.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671553.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666885.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658184.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000634725.1	non canonical polymorphism
ENST00000656229.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653027.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664269.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658104.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667005.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667879.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667957.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655035.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660198.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662911.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663270.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665381.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671620.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667523.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436475.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000436475.3	QC splicing correct
ENST00000656034.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658957.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449140.2	QC splicing correct
ENST00000371116.4	MANE_select
ENST00000263440.6	LR annotation
ENST00000263440.6	MANE_select
ENST00000487136.2	QC splicing correct
ENST00000271002.15	MANE_select
ENST00000657197.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000480886.1	novel transcript
ENST00000371088.5	MANE_select
ENST00000493605.1	novel transcript
ENST00000496956.1	novel transcript
ENST00000460678.6	QC splicing correct
ENST00000460678.6	non canonical TEC
ENST00000461039.1	novel transcript
ENST00000650546.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000371084.8	MANE_select
ENST00000473117.2	QC splicing correct
ENST00000371079.6	MANE_select
ENST00000424995.2	FLJ38972
ENST00000657702.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000611228.4	non canonical TEC
ENST00000371076.7	MGC35130
ENST00000464349.1	novel transcript
ENST00000651257.2	CAGE supported TSS
ENST00000651257.2	KIAA1573
ENST00000651257.2	MANE_select
ENST00000650260.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000495994.5	novel transcript
ENST00000470527.1	novel transcript
ENST00000371072.8	KIAA1579
ENST00000342505.5	MANE_select
ENST00000672247.1	alternative 5' UTR
ENST00000672434.1	alternative 5' UTR
ENST00000672434.1	upstream uORF
ENST00000673254.1	NAGNAG splice site
ENST00000671954.1	alternative 5' UTR
ENST00000672179.1	alternative 5' UTR
ENST00000671929.1	alternative 5' UTR
ENST00000673502.1	alternative 5' UTR
ENST00000673502.1	upstream uORF
ENST00000672751.1	alternative 5' UTR
ENST00000672099.1	alternative 5' UTR
ENST00000672099.1	upstream uORF
ENST00000654678.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658189.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666562.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000634604.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000647968.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000654680.1	Assembled from RACEseq reads
ENST00000668343.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654707.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669029.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664673.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000444349.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663993.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658816.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000436350.2	QC splicing correct
ENST00000670320.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000327299.8	AK4
ENST00000327299.8	MANE_select
ENST00000463018.5	this variant and one or more of variant fragments RP4-630A11.1-006 and 007 could be part of a single variant
ENST00000483402.1	this variant and one or more of variant fragments RP4-630A11.1-006 and 007 could be part of a single variant
ENST00000371069.5	MANE_select
ENST00000472787.1	this variant and one or more of variant fragments RP4-630A11.1-004, 005 and 007 could be part of a single variant
ENST00000498720.1	this variant and one or more of variant fragments RP4-630A11.1-004 through 006 could be part of a single variant
ENST00000475108.5	novel transcript
ENST00000497874.5	novel transcript
ENST00000371065.9	MANE_select
ENST00000484243.1	novel transcript
ENST00000349533.11	MANE_select
ENST00000341517.9	MANE_select
ENST00000341517.9	alternative 5' UTR
ENST00000371045.9	NP_001032416.1
ENST00000493564.1	novel transcript
ENST00000371037.9	DKFZp761D221
ENST00000371037.9	MANE_select
ENST00000468286.5	novel transcript
ENST00000497055.1	novel transcript
ENST00000480548.5	novel transcript
ENST00000487507.1	novel transcript
ENST00000320161.10	novel transcript
ENST00000468570.1	novel transcript
ENST00000282670.7	FLJ40873
ENST00000282670.7	MANE_select
ENST00000371026.8	MANE_select
ENST00000491297.6	QC splicing correct
ENST00000371023.7	NP_996897.1
ENST00000357692.6	The cDNAs EM:AY124192.1, Em:AY124189.1 and Em:AF515448.1 contain an extra t at position 72 and an extra c at position 312 compared to the genomic sequence. The translation is therefore different to that published in these cDNA entries
ENST00000371016.5	This cDNA sequence (Em:AY124186.1) contains an extra t at base 72 and an extra c at base 312 compared to the genomic sequence. The translation is therefore different to that published in Em:AY124186.1
ENST00000371014.5	This cDNA (EM:AY124187.1) contains an extra t at position 72 compared to the genomic sequence. The translation is therefore different to that published in Em:AY124187.1 as it has an N-terminal extension of 54 amino acids
ENST00000401041.6	MANE_select
ENST00000401041.6	This cDNA (Em:AY124190.1) contains an extra t at position 72 compared to the genomic sequence. The translation is therefore different to that published in Em:AY124190.1 as it has an N-terminal extension of 54 amino acids
ENST00000235345.6	MANE_select
ENST00000371007.6	QC splicing correct
ENST00000544837.5	QC splicing correct
ENST00000448166.6	QC splicing correct
ENST00000347310.10	MANE_select
ENST00000425614.3	CAGE supported TSS
ENST00000425614.3	novel protein
ENST00000473881.2	novel transcript
ENST00000674203.2	MANE_select
ENST00000648487.1	NAGNAG splice site
ENST00000361219.11	MANE_select
ENST00000493607.1	novel transcript
ENST00000462814.1	novel transcript
ENST00000484880.1	novel transcript
ENST00000490406.1	novel transcript
ENST00000667745.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000634424.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000230113.5	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655752.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657338.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664968.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657691.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000370986.9	MANE_select
ENST00000617962.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000370982.4	MANE_select
ENST00000420587.5	FLJ42034
ENST00000413628.5	FLJ38762
ENST00000414904.1	non canonical TEC
ENST00000370981.3	MANE_select
ENST00000646789.1	CAGE supported TSS
ENST00000646789.1	LR annotation
ENST00000262348.9	MANE_select
ENST00000491811.5	novel transcript
ENST00000497187.5	novel transcript
ENST00000370973.2	alternative 5' UTR
ENST00000262340.6	MANE_select
ENST00000456315.7	FLJ20354
ENST00000456315.7	MANE_select
ENST00000525124.1	FLJ20483
ENST00000658427.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667299.1	Assembled from RACEseq reads
ENST00000661832.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667473.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664718.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660251.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650525.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000662276.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651989.2	MANE_select
ENST00000310961.9	KIAA1365
ENST00000370958.5	KIAA1365
ENST00000607936.5	non canonical TEC
ENST00000656012.1	Assembled from SLRseq reads (SRP049776)
ENST00000370952.4	FLJ20331
ENST00000370952.4	MANE_select
ENST00000370944.9	DKFZP566D1346
ENST00000370944.9	MANE_select
ENST00000262346.6	DKFZP566D1346
ENST00000490846.5	novel transcript
ENST00000498735.1	novel transcript
ENST00000361764.8	NP_001031723.1
ENST00000370940.6	NP_001026863.1
ENST00000359875.9	NP_001031722.1
ENST00000531950.1	QC splicing correct
ENST00000531950.1	alternative 3' UTR
ENST00000370938.8	MANE_select
ENST00000464926.1	this variant and variant fragment RP11-42O15.1-004 could be part of a single variant.
ENST00000482383.1	this variant and variant fragment RP11-42O15.1-003 could be part of a single variant.
ENST00000446037.2	Sw:P55213.2
ENST00000446037.2	Sw:P55866.1
ENST00000446037.2	Sw:P70677.1
ENST00000446037.2	Sw:Q8MJC3.1
ENST00000446037.2	Sw:Q8MJU1.1
ENST00000446037.2	Sw:Q8MKI5.1
ENST00000446037.2	Sw:Q95ND5.1
ENST00000663421.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664802.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660283.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000370920.8	Additional nucleotide causes a frame-shift in comparison to Sw:O95218
ENST00000370920.8	MANE_select
ENST00000254821.10	Additional nucleotide causes a frame-shift in comparison to Sw:O95218
ENST00000455406.6	Assembled from SLRseq reads (SRP049776)
ENST00000654734.1	Assembled from SLRseq reads (SRP049776)
ENST00000671179.1	Assembled from SLRseq reads (SRP049776)
ENST00000663294.1	Assembled from SLRseq reads (SRP049776)
ENST00000628797.2	non canonical other
ENST00000653422.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000653422.1	Assembled from SLRseq reads (SRP049776)
ENST00000583678.6	Assembled from SLRseq reads (SRP049776)
ENST00000670550.1	Assembled from SLRseq reads (SRP049776)
ENST00000608579.1	nested 454 RNA-Seq supported
ENST00000608360.1	nested 454 RNA-Seq supported
ENST00000357731.10	MANE_select
ENST00000474357.1	QC splicing correct
ENST00000653965.1	Assembled from SLRseq reads (SRP049776)
ENST00000667836.1	Assembled from SLRseq reads (SRP049776)
ENST00000665984.1	Assembled from SLRseq reads (SRP049776)
ENST00000662505.1	Assembled from SLRseq reads (SRP049776)
ENST00000666987.1	Assembled from SLRseq reads (SRP049776)
ENST00000659328.1	Assembled from SLRseq reads (SRP049776)
ENST00000668734.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660076.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654386.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664523.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661739.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671099.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666853.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666164.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656766.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418078.3	QC splicing correct
ENST00000418078.3	non canonical other
ENST00000650621.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000661787.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658942.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662360.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663350.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656781.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000415686.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000444827.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654152.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661322.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657455.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452553.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666103.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670941.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664468.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000424953.1	QC splicing correct
ENST00000649962.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000667324.1	Assembled from SLRseq reads (SRP049776)
ENST00000666275.1	Assembled from SLRseq reads (SRP049776)
ENST00000395089.5	QC splicing correct
ENST00000354431.9	MANE_select
ENST00000354431.9	genebuild_only_MANE
ENST00000370898.8	upstream ATG
ENST00000467578.7	upstream ATG
ENST00000557284.7	NP_001106279.1
ENST00000557284.7	upstream ATG
ENST00000533006.1	NMD likely if extended
ENST00000648585.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000326637.8	MANE_select
ENST00000294635.5	MANE_select
ENST00000294635.5	confirm experimentally
ENST00000433746.2	QC splicing correct
ENST00000326665.10	MANE_select
ENST00000326665.10	QC splicing correct
ENST00000340866.10	MANE_select
ENST00000370870.5	Alternatively spliced 5' UTR, shares CDS with RP11-17E13.1-001 (partial)
ENST00000370870.5	alternative 5' UTR
ENST00000441120.1	Alternatively spliced 5' UTR, shares CDS with RP11-17E13.1-001 (partial)
ENST00000441120.1	alternative 5' UTR
ENST00000370867.8	MANE_select
ENST00000449696.3	non canonical TEC
ENST00000648424.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000532509.5	QC splicing correct
ENST00000370841.9	MANE_select
ENST00000530953.6	QC splicing correct
ENST00000319942.8	MANE_select
ENST00000263187.4	MANE_select
ENST00000284142.7	MANE_select
ENST00000663316.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668722.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659632.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668000.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666008.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660289.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666157.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663495.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654326.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660524.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663145.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663496.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664339.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658579.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660655.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666909.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658660.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659182.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665343.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653726.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662311.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654893.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436121.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668173.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659190.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000328299.4	MANE_select
ENST00000318803.6	FLJ38439
ENST00000477717.6	MANE_select
ENST00000370812.8	MANE_select
ENST00000654296.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000354567.7	MANE_select
ENST00000478407.1	alternative 5' UTR
ENST00000666710.1	Assembled from SLRseq reads (SRP049776)
ENST00000370801.8	MANE_select
ENST00000370794.7	MANE_select
ENST00000524536.5	alternative 5' UTR
ENST00000525113.5	NMD likely if extended
ENST00000528150.1	NMD likely if extended
ENST00000530709.5	alternative 5' UTR
ENST00000524778.1	alternative 5' UTR
ENST00000645526.1	alternative 5' UTR
ENST00000476203.2	QC splicing correct
ENST00000334785.12	MANE_select
ENST00000489495.5	DKFZp779L1713
ENST00000370768.7	MANE_select
ENST00000477671.2	QC splicing correct
ENST00000426517.1	alternative 5' UTR
ENST00000370763.6	MANE_select
ENST00000476882.1	novel transcript
ENST00000370759.4	FLJ20075
ENST00000370759.4	MANE_select
ENST00000608684.1	CAGE supported TSS
ENST00000650170.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000370758.5	alternative 5' UTR
ENST00000370757.8	MANE_select
ENST00000452835.1	alternative 5' UTR
ENST00000370751.10	MANE_select
ENST00000370751.10	NP_006811
ENST00000459784.6	QC splicing correct
ENST00000459784.6	non canonical conserved
ENST00000486882.5	DKFZp451O2417
ENST00000462041.1	QC splicing correct
ENST00000370747.9	MANE_select
ENST00000370742.4	FLJ26255
ENST00000370742.4	MANE_select
ENST00000655029.1	alternative 5' UTR
ENST00000659463.1	alternative 5' UTR
ENST00000662530.1	alternative 5' UTR
ENST00000662640.1	alternative 5' UTR
ENST00000659969.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674378.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000674378.1	Assembled from SLRseq reads (SRP049776)
ENST00000674386.1	Assembled from SLRseq reads (SRP049776)
ENST00000473719.5	QC splicing correct
ENST00000370721.5	QC splicing correct
ENST00000370721.5	non canonical conserved
ENST00000370727.5	non canonical conserved
ENST00000370725.5	QC splicing correct
ENST00000370725.5	non canonical conserved
ENST00000370723.5	QC splicing correct
ENST00000370723.5	non canonical conserved
ENST00000370728.5	QC splicing correct
ENST00000370728.5	non canonical conserved
ENST00000370730.5	QC splicing correct
ENST00000370730.5	non canonical conserved
ENST00000469377.6	FLJ41428
ENST00000674458.1	Assembled from SLRseq reads (SRP049776)
ENST00000674489.1	Assembled from SLRseq reads (SRP049776)
ENST00000674442.1	Assembled from SLRseq reads (SRP049776)
ENST00000674419.1	Assembled from SLRseq reads (SRP049776)
ENST00000674419.1	alternative 5' UTR
ENST00000674407.1	Assembled from SLRseq reads (SRP049776)
ENST00000674168.1	Assembled from SLRseq reads (SRP049776)
ENST00000674307.1	Assembled from SLRseq reads (SRP049776)
ENST00000674209.1	Assembled from SLRseq reads (SRP049776)
ENST00000674367.1	Assembled from SLRseq reads (SRP049776)
ENST00000674410.1	Assembled from SLRseq reads (SRP049776)
ENST00000674373.1	Assembled from SLRseq reads (SRP049776)
ENST00000674492.1	Assembled from SLRseq reads (SRP049776)
ENST00000674492.1	alternative 3' UTR
ENST00000674333.1	Assembled from SLRseq reads (SRP049776)
ENST00000674333.1	NMD likely if extended
ENST00000674393.1	Assembled from SLRseq reads (SRP049776)
ENST00000674393.1	alternative 5' UTR
ENST00000674208.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674208.1	Assembled from SLRseq reads (SRP049776)
ENST00000449420.5	QC splicing correct
ENST00000674198.1	Assembled from RACEseq reads
ENST00000674198.1	Assembled from SLRseq reads (SRP049776)
ENST00000464775.6	Assembled from RACEseq reads
ENST00000674464.1	Assembled from RACEseq reads
ENST00000402328.2	QC splicing correct
ENST00000472424.2	Assembled from SLRseq reads (SRP049776)
ENST00000653483.1	Assembled from SLRseq reads (SRP049776)
ENST00000420549.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663002.1	Assembled from SLRseq reads (SRP049776)
ENST00000452901.5	QC splicing correct
ENST00000452901.5	non canonical polymorphism
ENST00000659533.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669455.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419658.1	QC splicing correct
ENST00000659693.1	Assembled from SLRseq reads (SRP049776)
ENST00000655348.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647626.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000647626.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000446227.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660423.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664539.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670031.1	Assembled from SLRseq reads (SRP049776)
ENST00000662803.1	Assembled from SLRseq reads (SRP049776)
ENST00000657125.1	Assembled from SLRseq reads (SRP049776)
ENST00000260505.13	FLJ44842 and FLJ23033
ENST00000260505.13	MANE_select
ENST00000472688.5	novel transcript FLJ46763
ENST00000477524.5	novel transcript
ENST00000488014.5	novel transcript
ENST00000480533.1	nove transcript
ENST00000472937.1	novel transcript
ENST00000485638.5	FLJ36855
ENST00000464289.1	novel transcript
ENST00000482783.1	novel transcript
ENST00000467670.1	novel transcript
ENST00000370685.7	DKFZp686K18247
ENST00000370685.7	MANE_select
ENST00000446538.5	NP_001229786.1
ENST00000370680.5	DKFZp686G17199
ENST00000394839.6	FLJ34101
ENST00000394834.8	MANE_select
ENST00000394834.8	alternative 5' UTR
ENST00000370669.5	alternative 5' UTR
ENST00000370668.7	orthologue to mouse OTTMUSP00000045746
ENST00000370670.2	alternative 5' UTR
ENST00000370665.4	MANE_select
ENST00000370654.6	MANE_select
ENST00000370645.9	MANE_select
ENST00000370645.9	alternative 5' UTR
ENST00000649871.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000490879.8	upstream ATG
ENST00000370630.6	MANE_select
ENST00000342203.8	MANE_select
ENST00000476905.6	non canonical TEC
ENST00000422026.1	alternative 5' UTR
ENST00000370611.4	MANE_select
ENST00000370611.4	genebuild_only_MANE
ENST00000370608.8	MANE_select
ENST00000370596.5	alternative 5' UTR
ENST00000294664.11	MANE_select
ENST00000464801.1	not organism-supported
ENST00000370589.7	MANE_select
ENST00000341460.6	MANE_select
ENST00000341460.6	NP_115560.1
ENST00000471115.6	MANE_select
ENST00000648566.1	CAGE supported TSS
ENST00000648566.1	LR annotation
ENST00000648566.1	MANE_select
ENST00000654182.1	Assembled from SLRseq reads (SRP049776)
ENST00000426972.8	upstream uORF
ENST00000284031.13	MANE_select
ENST00000633113.1	CAGE supported TSS
ENST00000488557.6	QC splicing correct
ENST00000451137.7	MANE_select
ENST00000370574.4	FLJ20729
ENST00000370574.4	MANE_select
ENST00000370571.7	MANE_select
ENST00000370571.7	NP_690850
ENST00000496682.2	alternative 5' UTR
ENST00000359242.7	KIAA1229
ENST00000476054.5	novel transcript
ENST00000473792.2	novel transcript
ENST00000472144.5	novel transcript
ENST00000463933.5	novel transcript
ENST00000496592.5	novel transcript
ENST00000488879.6	novel transcript
ENST00000479890.5	novel transcript
ENST00000486557.1	novel transcript
ENST00000472368.1	novel transcript
ENST00000480440.5	novel transcript
ENST00000394733.2	alternative 5' UTR
ENST00000478286.2	alternative 5' UTR
ENST00000370565.5	MANE_select
ENST00000490884.1	this variant and variant fragment RP11-444C12.2-003 could be part of a single variant
ENST00000498802.1	this variant and variant fragment RP11-444C12.2-002 could be part of a single variant
ENST00000394711.2	CAGE supported TSS
ENST00000394711.2	LR annotation
ENST00000394711.2	MANE_select
ENST00000370563.3	MANE_select
ENST00000456587.1	QC splicing correct
ENST00000456587.1	non canonical TEC
ENST00000650379.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000284054.7	QC splicing correct
ENST00000370558.8	MANE_select
ENST00000331835.10	MANE_select
ENST00000648872.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000370550.10	MANE_select
ENST00000422417.1	non canonical TEC
ENST00000370544.10	MANE_select
ENST00000370542.1	alternative 5' UTR
ENST00000452509.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669398.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000437598.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670439.1	Assembled from SLRseq reads (SRP049776)
ENST00000458097.5	FLJ41840
ENST00000657030.1	Assembled from SLRseq reads (SRP049776)
ENST00000425750.2	QC splicing correct
ENST00000662514.1	Assembled from SLRseq reads (SRP049776)
ENST00000370521.8	MANE_select
ENST00000370500.10	MANE_select
ENST00000418217.1	QC splicing correct
ENST00000446900.6	DKFZp686J0664
ENST00000370491.7	NP_001008662.1
ENST00000260508.9	MANE_select
ENST00000652648.1	MANE_select
ENST00000652648.1	genebuild_only_MANE
ENST00000413769.1	alternative 5' UTR
ENST00000370481.9	MANE_select
ENST00000235878.5	FLJ10961
ENST00000475853.2	NMD likely if extended
ENST00000568006.1	QC splicing correct
ENST00000370473.5	MANE_select
ENST00000370466.4	MANE_select
ENST00000370466.4	alternative 5' UTR
ENST00000464839.5	DKFZp451C2311
ENST00000463660.1	FLJ16497
ENST00000654891.1	Assembled from SLRseq reads (SRP049776)
ENST00000294671.3	FLJ38822
ENST00000294671.3	MANE_select
ENST00000650452.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000355754.7	DKFZp451D0616 and FLJ00316
ENST00000355754.7	MANE_select
ENST00000481397.1	QC splicing correct
ENST00000481145.1	novel transcript
ENST00000471171.1	novel transcript
ENST00000490568.1	QC splicing correct
ENST00000490568.1	non canonical TEC
ENST00000443807.1	alternative 5' UTR
ENST00000437128.1	QC splicing correct
ENST00000370456.5	MANE_select
ENST00000671515.1	Assembled from SLRseq reads (SRP049776)
ENST00000655391.1	Assembled from SLRseq reads (SRP049776)
ENST00000662176.1	Assembled from SLRseq reads (SRP049776)
ENST00000330947.7	MANE_select
ENST00000449440.5	alternative 5' UTR
ENST00000660444.1	Assembled from SLRseq reads (SRP049776)
ENST00000443562.2	Assembled from SLRseq reads (SRP049776)
ENST00000666228.1	Assembled from SLRseq reads (SRP049776)
ENST00000655657.1	Assembled from SLRseq reads (SRP049776)
ENST00000666079.1	Assembled from SLRseq reads (SRP049776)
ENST00000660266.1	Assembled from SLRseq reads (SRP049776)
ENST00000415584.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655898.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000526694.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666432.1	Assembled from SLRseq reads (SRP049776)
ENST00000370454.9	MANE_select
ENST00000609194.1	CAGE supported TSS
ENST00000525774.5	alternative 5' UTR
ENST00000337338.9	MANE_select
ENST00000394593.7	alternative 5' UTR
ENST00000532201.5	alternative 5' UTR
ENST00000414841.1	alternative 5' UTR
ENST00000527156.1	alternative 5' UTR
ENST00000441269.2	alternative 5' UTR
ENST00000340281.9	MANE_select
ENST00000361911.9	NP_892020
ENST00000667592.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663908.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653744.1	Assembled from SLRseq reads (SRP049776)
ENST00000661553.1	Assembled from SLRseq reads (SRP049776)
ENST00000655087.1	Assembled from SLRseq reads (SRP049776)
ENST00000370445.5	MANE_select
ENST00000660766.1	Assembled from SLRseq reads (SRP049776)
ENST00000659815.1	Assembled from SLRseq reads (SRP049776)
ENST00000662386.1	Assembled from SLRseq reads (SRP049776)
ENST00000671059.1	Assembled from SLRseq reads (SRP049776)
ENST00000659034.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659034.1	Assembled from SLRseq reads (SRP049776)
ENST00000657053.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669273.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664159.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435649.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668679.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000634619.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000635581.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653770.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658618.1	Assembled from SLRseq reads (SRP049776)
ENST00000443802.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000443802.2	Assembled from SLRseq reads (SRP049776)
ENST00000655784.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670437.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670363.1	Assembled from SLRseq reads (SRP049776)
ENST00000664774.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671243.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652632.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000666920.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670028.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662449.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000650406.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000655113.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000337393.10	MANE_select
ENST00000337393.10	genebuild_only_MANE
ENST00000462405.5	FLJ36760
ENST00000370425.8	MANE_select
ENST00000430465.1	DKFZp686L0198
ENST00000481900.5	FLJ39011
ENST00000455133.1	alternative 5' UTR
ENST00000234626.11	MANE_select
ENST00000426137.1	Alternatively spliced 5' UTR, shares CDS with RP11-47K11.1-001 (partial)
ENST00000426137.1	alternative 5' UTR
ENST00000212355.9	MANE_select
ENST00000212355.9	genebuild_only_MANE
ENST00000525962.5	NP_003234.2
ENST00000417833.2	alternative 5' UTR
ENST00000448194.6	alternative 5' UTR
ENST00000470955.6	alternative 5' UTR
ENST00000423434.5	alternative 5' UTR
ENST00000440509.5	alternative 5' UTR
ENST00000426141.6	alternative 5' UTR
ENST00000449584.5	alternative 5' UTR
ENST00000427104.5	alternative 5' UTR
ENST00000355011.7	alternative 5' UTR
ENST00000399546.7	MANE_select
ENST00000399546.7	alternative 5' UTR
ENST00000450792.5	alternative 5' UTR
ENST00000548992.5	alternative 5' UTR
ENST00000552654.1	alternative 5' UTR
ENST00000457265.1	alternative 5' UTR
ENST00000402388.1	alternative 5' UTR
ENST00000680541.1	upstream ATG
ENST00000370383.5	MANE_select
ENST00000342818.4	NP_899065
ENST00000636805.2	MANE_select
ENST00000674371.1	CAGE supported TSS
ENST00000609675.1	non canonical TEC
ENST00000370375.8	MANE_select
ENST00000370360.8	MANE_select
ENST00000610020.2	MANE_select
ENST00000484158.1	NMD likely if extended
ENST00000294702.6	Alternatively spliced 5' UTR, shares CDS with RP5-1014C4.1-001
ENST00000294702.6	MANE_select
ENST00000294702.6	alternative 5' UTR
ENST00000370321.8	CAGE supported TSS
ENST00000370321.8	LR annotation
ENST00000370321.8	MANE_select
ENST00000370310.5	MANE_select
ENST00000664771.1	Assembled from SLRseq reads (SRP049776)
ENST00000474314.6	QC splicing correct
ENST00000370298.9	MANE_select
ENST00000497976.5	QC splicing correct
ENST00000370282.8	MANE_select
ENST00000343253.11	QC splicing correct
ENST00000401026.7	QC splicing correct
ENST00000401026.7	upstream ATG
ENST00000479653.5	novel transcript
ENST00000421014.2	alternative 5' UTR
ENST00000446528.6	QC splicing correct
ENST00000668257.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661111.1	Assembled from SLRseq reads (SRP049776)
ENST00000440778.5	QC splicing correct
ENST00000659026.1	Assembled from SLRseq reads (SRP049776)
ENST00000657560.1	Assembled from SLRseq reads (SRP049776)
ENST00000669506.1	Assembled from SLRseq reads (SRP049776)
ENST00000421202.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436200.2	QC splicing correct
ENST00000670231.1	Assembled from SLRseq reads (SRP049776)
ENST00000452347.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653362.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653362.1	Assembled from SLRseq reads (SRP049776)
ENST00000655606.1	Assembled from SLRseq reads (SRP049776)
ENST00000445076.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445076.2	Assembled from SLRseq reads (SRP049776)
ENST00000457387.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000370272.9	MANE_select
ENST00000370267.1	alternative 5' UTR
ENST00000370267.1	alternative 5' UTR; shares CDS with RP4-713B5.1-001
ENST00000271234.13	MANE_select
ENST00000260502.11	MANE_select
ENST00000370244.5	alternative 5' UTR
ENST00000370244.5	alternatively spliced 5' UTR, shares CDS with RP5-1033H22.1-001
ENST00000370243.1	FLJ30880
ENST00000370243.1	alternative 5' UTR
ENST00000370243.1	alternatively spliced 5' UTR, shares CDS with RP5-1033H22.1-001
ENST00000479503.2	QC splicing correct
ENST00000649852.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000436063.7	MANE_select
ENST00000462746.6	QC splicing correct
ENST00000496535.6	novel transcript
ENST00000370238.8	MANE_select
ENST00000370225.4	MANE_select
ENST00000260526.11	MANE_select
ENST00000482481.1	novel transcript
ENST00000660441.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660441.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000418242.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654754.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657152.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662164.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000413103.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666276.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656153.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665417.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660527.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654057.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659885.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000370214.9	MANE_select
ENST00000464165.1	FLJ44476
ENST00000334047.12	MANE_select
ENST00000413541.1	FLJ37203
ENST00000435559.1	FLJ20387
ENST00000432162.6	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000418366.2	NAGNAG splice site
ENST00000271227.11	MANE_select
ENST00000271227.11	NP_001107578.1
ENST00000467909.5	NP_689582.2
ENST00000422520.6	alternative 5' UTR
ENST00000475883.5	novel transcript
ENST00000370206.9	MANE_select
ENST00000659966.1	Assembled from SLRseq reads (SRP049776)
ENST00000438509.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438509.2	Assembled from SLRseq reads (SRP049776)
ENST00000659935.1	Assembled from SLRseq reads (SRP049776)
ENST00000664672.1	Assembled from SLRseq reads (SRP049776)
ENST00000657603.1	Assembled from SLRseq reads (SRP049776)
ENST00000666627.1	Assembled from SLRseq reads (SRP049776)
ENST00000664573.1	Assembled from SLRseq reads (SRP049776)
ENST00000452846.5	QC splicing correct
ENST00000452846.5	non canonical TEC
ENST00000456582.2	Assembled from SLRseq reads (SRP049776)
ENST00000370205.6	MANE_select
ENST00000370205.6	MGC19780
ENST00000495856.1	novel transcript
ENST00000370203.9	FLJ31842
ENST00000370203.9	MANE_select
ENST00000456991.5	alternative 5' UTR
ENST00000455656.1	alternative 5' UTR
ENST00000463375.1	novel transcript
ENST00000663020.1	Assembled from SLRseq reads (SRP049776)
ENST00000370202.5	MANE_select
ENST00000661535.1	Assembled from SLRseq reads (SRP049776)
ENST00000664351.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650223.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000653589.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655217.1	Assembled from SLRseq reads (SRP049776)
ENST00000411798.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667517.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654040.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669804.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664663.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665349.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000664740.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656764.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671269.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413825.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655418.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451675.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000593954.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659691.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000609411.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654486.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667522.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660327.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668462.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668462.1	QC splicing correct
ENST00000662075.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000412513.4	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000435311.1	FLJ31487
ENST00000675735.1	align_id:3522004|asmbl_12169
ENST00000675735.1	long_read_pipeline_2
ENST00000674951.1	MANE_select
ENST00000426398.3	align_id:3522001|asmbl_12166
ENST00000676292.1	long_read_pipeline_2
ENST00000676096.1	align_id:3522026|asmbl_12191
ENST00000370192.8	MANE_select
ENST00000667128.1	Assembled from SLRseq reads (SRP049776)
ENST00000659427.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000648602.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000529992.5	NP_689424.2
ENST00000306121.8	MANE_select
ENST00000306121.8	NP_057060.2
ENST00000306121.8	isoform a
ENST00000454199.1	alternative 5' UTR
ENST00000263177.5	MANE_select
ENST00000425113.1	FLJ38225
ENST00000660510.1	Assembled from SLRseq reads (SRP049776)
ENST00000647692.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000658279.1	Assembled from SLRseq reads (SRP049776)
ENST00000662973.1	Assembled from SLRseq reads (SRP049776)
ENST00000370185.8	DKFZp761A0623
ENST00000370185.8	upstream ATG
ENST00000457765.6	upstream ATG
ENST00000370184.1	KIAA0455
ENST00000438829.2	QC splicing correct
ENST00000263174.9	MANE_select
ENST00000646001.2	MANE_select
ENST00000489209.2	QC splicing correct
ENST00000492943.1	QC splicing correct
ENST00000361915.8	MANE_select
ENST00000370165.7	alternative 5' UTR
ENST00000370163.7	alternative 5' UTR
ENST00000294724.8	alternative 5' UTR
ENST00000427993.7	alternative 5' UTR
ENST00000533028.8	MANE_select
ENST00000465289.6	alternative 5' UTR
ENST00000640178.1	alternative 3' UTR
ENST00000640360.1	alternative 3' UTR
ENST00000639088.1	alternative 3' UTR
ENST00000370155.9	FLJ21336
ENST00000370153.6	NP_001258614.1
ENST00000370153.6	QC splicing correct
ENST00000422078.1	alternative 5' UTR
ENST00000640238.1	alternative 3' UTR
ENST00000370152.8	MANE_select
ENST00000370152.8	NP_149044.2
ENST00000287482.6	DKFZp761A078
ENST00000287482.6	MANE_select
ENST00000370141.7	FLJ10287
ENST00000493651.1	novel transcript
ENST00000370137.6	MANE_select
ENST00000370132.8	MANE_select
ENST00000648283.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000650038.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000670421.1	Assembled from SLRseq reads (SRP049776)
ENST00000653267.1	Assembled from SLRseq reads (SRP049776)
ENST00000665523.1	Assembled from SLRseq reads (SRP049776)
ENST00000666916.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666916.1	Assembled from SLRseq reads (SRP049776)
ENST00000370128.9	MANE_select
ENST00000483474.1	novel transcript
ENST00000361544.11	LR annotation
ENST00000336454.5	MANE_select
ENST00000469387.1	novel transcript
ENST00000315033.5	MANE_select
ENST00000648946.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000650339.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000294728.7	MANE_select
ENST00000370115.1	QC splicing correct
ENST00000370113.7	alternative 5' UTR
ENST00000370114.8	MANE_select
ENST00000494907.1	novel transcript
ENST00000480774.1	novel transcript
ENST00000609247.1	CAGE supported TSS
ENST00000357650.9	MANE_select
ENST00000357650.9	alternative 3' UTR
ENST00000370105.7	novel transcript (FLJ43496)
ENST00000370109.8	MANE_select
ENST00000492067.5	novel transcript
ENST00000488789.5	novel transcript
ENST00000481871.5	novel transcript
ENST00000464270.5	novel transcript
ENST00000466807.5	novel transcript
ENST00000477293.5	novel transcript
ENST00000498372.5	novel transcript
ENST00000488176.1	alternative 5' UTR
ENST00000490732.5	novel transcript
ENST00000476507.1	novel transcript
ENST00000451213.2	Assembled from SLRseq reads (SRP049776)
ENST00000451213.2	FLJ11489
ENST00000663958.1	Assembled from SLRseq reads (SRP049776)
ENST00000656060.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654574.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664684.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000454721.6	Assembled from SLRseq reads (SRP049776)
ENST00000656047.1	Assembled from SLRseq reads (SRP049776)
ENST00000654544.1	Assembled from SLRseq reads (SRP049776)
ENST00000655226.1	Assembled from SLRseq reads (SRP049776)
ENST00000659528.1	Assembled from SLRseq reads (SRP049776)
ENST00000656671.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658370.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666646.1	Assembled from SLRseq reads (SRP049776)
ENST00000669687.1	Assembled from SLRseq reads (SRP049776)
ENST00000656224.1	Assembled from SLRseq reads (SRP049776)
ENST00000666988.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000561748.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000305352.7	MANE_select
ENST00000454466.1	QC splicing correct
ENST00000668955.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648951.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000657394.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665036.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663157.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655157.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664322.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660911.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669180.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666574.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656484.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662434.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000370103.9	MANE_select
ENST00000440278.2	possibly a expressed pseudogene based on cDNA: Em:AF395440
ENST00000656454.1	Assembled from SLRseq reads (SRP049776)
ENST00000370096.9	MANE_select
ENST00000512756.5	NP_542197.3
ENST00000645458.1	alternative 5' UTR
ENST00000427239.5	QC splicing correct
ENST00000662345.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000662345.1	Assembled from SLRseq reads (SRP049776)
ENST00000668150.1	Assembled from SLRseq reads (SRP049776)
ENST00000447322.3	Assembled from SLRseq reads (SRP049776)
ENST00000444810.6	Assembled from SLRseq reads (SRP049776)
ENST00000531883.5	alternative 5' UTR
ENST00000423855.7	MANE_select
ENST00000423855.7	alternative 3' UTR
ENST00000423855.7	alternative 5' UTR
ENST00000435302.5	alternative 5' UTR
ENST00000453959.5	alternative 5' UTR
ENST00000462971.1	novel transcript
ENST00000481821.1	novel transcript
ENST00000430659.5	alternative 5' UTR
ENST00000422549.1	alternative 5' UTR
ENST00000494409.1	QC splicing correct
ENST00000494409.1	non canonical TEC
ENST00000464691.1	novel transcript
ENST00000446703.5	alternative 5' UTR
ENST00000425410.1	alternative 5' UTR
ENST00000648518.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000600656.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652819.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000597635.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000595309.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000624898.4	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657035.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659994.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669362.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000610126.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000669135.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654698.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661746.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000623043.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417385.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656436.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657711.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655639.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000429608.1	putative novel transcript
ENST00000659929.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659929.1	QC splicing correct
ENST00000662724.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000415910.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000370078.2	MANE_select
ENST00000650338.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000370073.6	align_id:3522562|asmbl_12727
ENST00000370068.6	MANE_select
ENST00000370065.1	QC splicing correct
ENST00000477948.1	QC splicing correct
ENST00000370056.9	MANE_select
ENST00000469325.5	FLJ40431
ENST00000635340.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661268.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000565488.6	MANE_select
ENST00000565488.6	QC splicing correct
ENST00000370041.4	NP_998816.1
ENST00000648874.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000357046.4	Part of the  neuroblastoma breakpoint family
ENST00000545941.2	Part of the  neuroblastoma breakpoint family
ENST00000495380.6	QC splicing correct
ENST00000370035.8	MANE_select
ENST00000483371.1	DKFZp686N01110
ENST00000651461.1	MANE_select
ENST00000651461.1	genebuild_only_MANE
ENST00000648569.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000370025.9	MANE_select
ENST00000370017.9	MANE_select
ENST00000370008.4	MANE_select
ENST00000370001.8	MANE_select
ENST00000461774.5	QC splicing correct
ENST00000357393.6	CAGE supported TSS
ENST00000662170.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000435987.5	alternative 5' UTR
ENST00000642355.1	alternative 3' UTR
ENST00000645164.2	alternative 5' UTR
ENST00000264126.9	CAGE supported TSS
ENST00000264126.9	LR annotation
ENST00000264126.9	MANE_select
ENST00000643094.1	alternative 5' UTR
ENST00000675617.1	NMD likely if extended
ENST00000435475.5	alternative 5' UTR
ENST00000675018.1	upstream ATG
ENST00000369968.7	upstream ATG
ENST00000675001.1	alternative 5' UTR
ENST00000369969.7	MANE_select
ENST00000369976.5	non canonical TEC
ENST00000675571.1	alternative 5' UTR
ENST00000675571.1	upstream ATG
ENST00000675650.1	alternative 5' UTR
ENST00000675654.1	alternative 5' UTR
ENST00000675790.1	upstream ATG
ENST00000674849.1	alternative 3' UTR
ENST00000674849.1	alternative 5' UTR
ENST00000675956.1	alternative 5' UTR
ENST00000675508.1	alternative 5' UTR
ENST00000674527.1	alternative 5' UTR
ENST00000676059.1	alternative 5' UTR
ENST00000400794.7	NP_001136022.1
ENST00000369962.8	MANE_select
ENST00000530772.5	alternative 5' UTR
ENST00000528747.1	alternative 5' UTR
ENST00000461096.6	QC splicing correct
ENST00000338366.6	MANE_select
ENST00000608574.1	CAGE supported TSS
ENST00000338272.9	MANE_select
ENST00000651489.1	NP_001309177.1
ENST00000602755.1	CAGE supported TSS
ENST00000369948.8	MANE_select
ENST00000533147.5	alternative 5' UTR
ENST00000531664.5	alternative 5' UTR
ENST00000534476.5	alternative 5' UTR
ENST00000526264.5	alternative 5' UTR
ENST00000369939.8	MANE_select
ENST00000234677.7	MANE_select
ENST00000271332.4	MANE_select
ENST00000409267.5	alternative 5' UTR
ENST00000369903.6	alternative 5' UTR
ENST00000429031.5	alternative 5' UTR
ENST00000418914.2	alternative 5' UTR
ENST00000357155.2	MANE_select
ENST00000256637.8	MANE_select
ENST00000271308.9	MANE_select
ENST00000369872.4	MANE_select
ENST00000475497.1	novel transcript
ENST00000459635.1	novel transcript
ENST00000496961.5	novel transcript (FLJ44753)
ENST00000420578.7	FLJ39035
ENST00000420578.7	MANE_select
ENST00000528785.1	not organism-supported
ENST00000430195.2	FLJ45666
ENST00000369864.5	MANE_select
ENST00000369864.5	amphoterin-induced gene (KIAA1161) (AMIGO)
ENST00000369862.1	alternative 5' UTR
ENST00000369862.1	alternatively spliced 5' UTR, shares CDS with RP5-831G13.4-001
ENST00000369851.7	MANE_select
ENST00000679935.1	CAGE supported TSS
ENST00000679935.1	MANE_select
ENST00000531734.6	alternative 5' UTR
ENST00000655992.1	upstream ATG
ENST00000528667.7	MANE_select
ENST00000528667.7	alternative 5' UTR
ENST00000528667.7	upstream ATG
ENST00000469039.2	NMD likely if extended
ENST00000531203.6	alternative 5' UTR
ENST00000525415.2	alternative 3' UTR
ENST00000681108.1	alternative 3' UTR
ENST00000680148.1	alternative 3' UTR
ENST00000681181.1	alternative 3' UTR
ENST00000680820.1	alternative 3' UTR
ENST00000680929.1	alternative 3' UTR
ENST00000680531.1	alternative 3' UTR
ENST00000680132.1	alternative 3' UTR
ENST00000681132.1	alternative 3' UTR
ENST00000679892.1	alternative 3' UTR
ENST00000679981.1	alternative 3' UTR
ENST00000681218.1	alternative 3' UTR
ENST00000680832.1	alternative 3' UTR
ENST00000681862.1	alternative 3' UTR
ENST00000681496.1	alternative 3' UTR
ENST00000679379.1	CAGE supported TSS
ENST00000527846.7	NMD likely if extended
ENST00000369836.9	MANE_select
ENST00000464733.5	this variant and one of variant fragments AC000031.2-011 or 012 could be part of a single variant.
ENST00000461767.5	this variant and one of variant fragments AC000031.2-011 or 012 could be part of a single variant.
ENST00000369833.5	FLJ45317
ENST00000485640.5	QC splicing correct
ENST00000493171.5	this variant and one of variant fragments AC000031.2-005 or 006 could be part of a single variant.
ENST00000493395.1	this variant and one of variant fragments AC000031.2-005 or 006 could be part of a single variant.
ENST00000460717.7	NP_001135840.1
ENST00000241337.9	MANE_select
ENST00000241337.9	NP_001135840.1
ENST00000309851.10	MANE_select
ENST00000647711.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000256593.8	MANE_select
ENST00000369813.5	FLJ43832
ENST00000492718.1	FLJ43832
ENST00000648974.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000361066.7	MANE_select
ENST00000361066.7	QC splicing correct
ENST00000361965.9	MANE_select
ENST00000361852.8	FLJ21522
ENST00000498743.1	this variant and one or more of variant fragments RP4-735C1.3-006 through 010 could be part of a single variant.
ENST00000489465.1	this variant and one or more of variant fragments RP4-735C1.3-008 through 010 could be part of a single variant.
ENST00000475725.1	this variant and one or more of variant fragments RP4-735C1.3-004 and 007 through 010 could be part of a single variant.
ENST00000472325.5	this variant and one or more of variant fragments RP4-735C1.3-004 through 007 could be part of a single variant
ENST00000482453.1	this variant and one or more of variant fragments RP4-735C1.3-004, 006, 008, 009 and 010 could be part of a single variant.
ENST00000494151.1	this variant and one or more of variant fragments RP4-735C1.3-005 through 007 and 010 could be part of a single variant.
ENST00000477568.1	this variant and one or more of variant fragments RP4-735C1.3-004 through 008 could be part of a single variant.
ENST00000357302.8	alternative 5' UTR
ENST00000329608.11	MANE_select
ENST00000369802.7	alternative 3' UTR
ENST00000369802.7	alternatively spliced 3' UTR, shares CDS with RP11-195M16.1-001
ENST00000369799.10	MANE_select
ENST00000475081.1	this variant and variant fragment RP11-180N18.1-004 could be part of a single variant.
ENST00000481423.1	this variant and variant fragment RP11-180N18.1-004 could be part of a single variant.
ENST00000369796.5	FLJ14743
ENST00000369795.8	KIAA1761
ENST00000369795.8	MANE_select
ENST00000489059.1	novel transcript
ENST00000540970.1	novel transcript
ENST00000535003.5	novel transcript
ENST00000539541.1	novel transcript
ENST00000461054.1	novel transcript
ENST00000647563.2	LR annotation
ENST00000647563.2	MANE_select
ENST00000334179.5	MANE_select
ENST00000331565.5	MANE_select
ENST00000331565.5	QC splicing correct
ENST00000465159.1	novel transcript
ENST00000430098.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438661.3	MANE_select
ENST00000438661.3	Q03721-3
ENST00000459877.1	DKFZp686F1444
ENST00000636402.1	cow EST CK846082 supports this model
ENST00000369784.9	MANE_select
ENST00000650953.2	upstream ATG
ENST00000652342.2	CAGE supported TSS
ENST00000654015.1	CAGE supported TSS
ENST00000654015.1	LR annotation
ENST00000654015.1	upstream ATG
ENST00000617047.1	CAGE supported TSS
ENST00000617047.1	upstream ATG
ENST00000662452.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000585330.6	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000608067.6	Assembled from SLRseq reads (SRP049776)
ENST00000659565.1	Assembled from SLRseq reads (SRP049776)
ENST00000609512.6	Assembled from SLRseq reads (SRP049776)
ENST00000609244.6	Assembled from SLRseq reads (SRP049776)
ENST00000608253.2	Assembled from SLRseq reads (SRP049776)
ENST00000626643.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608111.1	nested 454 RNA-Seq supported
ENST00000608152.1	nested 454 RNA-Seq supported
ENST00000608077.1	nested 454 RNA-Seq supported
ENST00000598158.5	NAGNAG splice site
ENST00000596890.3	NAGNAG splice site
ENST00000369779.9	FLJ26475
ENST00000369779.9	MANE_select
ENST00000497687.1	NMD likely if extended
ENST00000497687.1	QC splicing correct
ENST00000474861.6	alternative 5' UTR
ENST00000602318.6	CAGE supported TSS
ENST00000602318.6	MANE_select
ENST00000602318.6	upstream ATG
ENST00000271331.4	MANE_select
ENST00000369771.4	LOC395116
ENST00000369771.4	MANE_select
ENST00000640450.1	NMD likely if extended
ENST00000639227.1	NMD likely if extended
ENST00000638616.2	alternative 5' UTR
ENST00000316361.10	MANE_select
ENST00000316361.10	alternative 5' UTR
ENST00000638532.1	alternative 5' UTR
ENST00000485317.6	Based on cDNA from Zhao et al. (2013) PMID:23792947
ENST00000485317.6	alternative 5' UTR
ENST00000674674.1	CHS.2509.20
ENST00000369769.4	MANE_select
ENST00000648608.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000271324.6	MANE_select
ENST00000476408.1	QC splicing correct
ENST00000476408.1	non canonical TEC
ENST00000440689.1	FLJ42178
ENST00000369763.5	MANE_select
ENST00000494675.5	alternative 5' UTR
ENST00000609118.1	CAGE supported TSS
ENST00000484310.6	MANE_select
ENST00000484310.6	alternative 5' UTR
ENST00000539140.6	novel transcript
ENST00000496430.6	QC splicing correct
ENST00000477769.1	novel transcript
ENST00000490780.5	novel transcript
ENST00000463682.1	novel transcript
ENST00000357172.9	MANE_select
ENST00000467362.1	DKFZp313C168
ENST00000357640.9	MANE_select
ENST00000369752.5	FLJ22457
ENST00000473682.5	novel transcript
ENST00000463713.5	novel transcript
ENST00000477586.5	novel transcript
ENST00000473822.5	novel transcript
ENST00000488786.1	novel transcript
ENST00000528451.5	alternative 5' UTR
ENST00000486561.6	alternative 5' UTR
ENST00000369744.6	NP_001020368.1
ENST00000474304.6	QC splicing correct
ENST00000369748.9	MANE_select
ENST00000369748.9	genebuild_only_MANE
ENST00000466741.5	NP_001020370.1
ENST00000477185.6	alternative 5' UTR
ENST00000497587.6	alternative 5' UTR
ENST00000524472.5	alternative 3' UTR
ENST00000533831.6	QC splicing correct
ENST00000369743.8	QC splicing correct
ENST00000456752.6	QC splicing correct
ENST00000369740.6	MANE_select
ENST00000477918.6	novel transcript
ENST00000353665.10	alternative 5' UTR
ENST00000489524.5	alternative 5' UTR
ENST00000484512.1	novel transcript
ENST00000369738.9	MANE_select
ENST00000468395.1	novel transcript
ENST00000369732.4	MANE_select
ENST00000235090.10	MANE_select
ENST00000497278.5	novel transcript
ENST00000459665.1	novel transcript
ENST00000369722.8	MANE_select
ENST00000343534.9	MGC24133
ENST00000369718.4	MANE_select
ENST00000464591.1	novel transcript
ENST00000369716.9	MANE_select
ENST00000443498.5	novel protein
ENST00000463993.1	novel transcript
ENST00000241356.5	MANE_select
ENST00000357260.6	CCDS841.1
ENST00000357260.6	MANE_select
ENST00000357260.6	isoform 1 (UniProtKB/Swiss-Prot)
ENST00000534365.1	QC splicing correct
ENST00000444059.2	CAGE supported TSS
ENST00000658759.1	Assembled from SLRseq reads (SRP049776)
ENST00000430373.2	Assembled from SLRseq reads (SRP049776)
ENST00000412270.1	CAGE supported TSS
ENST00000369702.5	MANE_select
ENST00000302127.5	MANE_select
ENST00000302127.5	alternative 5' UTR
ENST00000659549.1	Assembled from SLRseq reads (SRP049776)
ENST00000658120.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654472.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663553.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000271277.11	MANE_select
ENST00000369684.5	MANE_select
ENST00000369684.5	isoform WNT-2B2
ENST00000478360.1	novel transcript
ENST00000358039.9	MANE_select
ENST00000358039.9	isoform 1
ENST00000361846.7	isoform 5
ENST00000360743.8	isoform 3
ENST00000490715.5	isoform 5
ENST00000480988.5	novel transcript
ENST00000495109.2	QC splicing correct
ENST00000498197.1	novel transcript
ENST00000477682.1	novel transcript
ENST00000490067.5	isoform 2
ENST00000497457.5	novel transcript
ENST00000343210.11	isoform 4
ENST00000463235.5	novel transcript
ENST00000497235.5	novel transcript
ENST00000466360.5	novel transcript
ENST00000470519.5	novel transcript
ENST00000459630.5	novel transcript
ENST00000477332.5	novel transcript
ENST00000473206.5	novel transcript
ENST00000485753.5	novel transcript
ENST00000498383.5	novel transcript
ENST00000470683.1	novel transcript
ENST00000467335.5	novel transcript
ENST00000492274.1	novel transcript
ENST00000476936.5	novel transcript
ENST00000498626.1	novel transcript
ENST00000263168.4	MANE_select
ENST00000466066.1	novel transcript
ENST00000476820.1	novel transcript
ENST00000486416.1	novel transcript
ENST00000369645.5	alternative 5' UTR
ENST00000369645.5	alternative 5' UTR; shares CDS with RP11-426L16.2-001 and RP11-426L16.2-005
ENST00000496577.5	novel transcript
ENST00000475429.5	novel transcript
ENST00000468624.5	novel transcript
ENST00000465579.1	novel transcript
ENST00000357443.2	alternative 5' UTR
ENST00000357443.2	alternative 5' UTR; shares CDS with RP11-426L16.2-001 and RP11-426L16.2-006
ENST00000479858.1	novel transcript
ENST00000488160.5	novel transcript
ENST00000482545.5	novel transcript
ENST00000471160.5	novel transcript
ENST00000481711.1	novel transcript
ENST00000490413.1	novel transcript
ENST00000495374.5	novel transcript
ENST00000494319.1	novel transcript
ENST00000421943.1	QC splicing correct
ENST00000339083.12	MANE_select
ENST00000369642.7	alternative 5' UTR
ENST00000285735.6	alternative 5' UTR
ENST00000468093.5	QC splicing correct
ENST00000369638.6	alternative 5' UTR
ENST00000369637.5	QC splicing correct
ENST00000369637.5	alternative 5' UTR
ENST00000369632.6	alternative 5' UTR
ENST00000425265.6	alternative 5' UTR
ENST00000534717.5	alternative 5' UTR
ENST00000436685.6	QC splicing correct
ENST00000436685.6	alternative 5' UTR
ENST00000414971.1	alternative 5' UTR
ENST00000471106.5	QC splicing correct
ENST00000471106.5	non canonical TEC
ENST00000482367.1	QC splicing correct
ENST00000482367.1	non canonical TEC
ENST00000661136.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667852.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449572.2	QC splicing correct
ENST00000449572.2	not best-in-genome evidence
ENST00000658577.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000443580.6	EnsCodingFull|3P|XLOC_002986|TCONS_00019555:2.2143
ENST00000443580.6	alternative 5' UTR
ENST00000443580.6	alternative 5' UTR; shares CDS with RP4-580L15.1-001, RP4-580L15.1-002 and RP4-580L15.1-003
ENST00000369626.8	MANE_select
ENST00000369626.8	alternative 5' UTR
ENST00000369626.8	alternative 5' UTR; shares CDS with RP4-580L15.1-002, RP4-580L15.1-003 and RP4-580L15.1-005
ENST00000679803.1	EnsCodingFull|3P|XLOC_002986|TCONS_00019558:31.2152
ENST00000538576.5	alternative 5' UTR
ENST00000538576.5	alternative 5' UTR; shares CDS with RP4-580L15.1-001, RP4-580L15.1-003 and RP4-580L15.1-005
ENST00000458229.6	align_id:3523850|asmbl_14015
ENST00000429288.2	alternative 5' UTR
ENST00000429288.2	alternative 5' UTR; shares CDS with RP4-580L15.1-001, RP4-580L15.1-002 and RP4-580L15.1-005
ENST00000481750.1	novel transcript
ENST00000478835.1	novel transcript
ENST00000664314.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000428411.6	Assembled from SLRseq reads (SRP049776)
ENST00000662044.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654334.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000420168.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662852.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665960.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659961.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655233.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000421157.2	Assembled from SLRseq reads (SRP049776)
ENST00000361127.6	MANE_select
ENST00000466069.5	novel transcript
ENST00000470000.1	novel transcript
ENST00000492207.5	novel transcript
ENST00000466161.1	novel transcript
ENST00000307546.14	FLJ22764
ENST00000307546.14	MANE_select
ENST00000369617.8	NP_066016
ENST00000369615.5	KIAA1634
ENST00000369615.5	NP_690864
ENST00000369615.5	alternative 3' UTR
ENST00000369611.4	NP_690864
ENST00000474926.5	FLJ44821
ENST00000369604.6	MANE_select
ENST00000446739.1	alternative 5' UTR
ENST00000261441.9	MANE_select
ENST00000615321.1	CAGE supported TSS
ENST00000664434.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000418238.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419536.1	FLJ41205
ENST00000393316.8	MANE_select
ENST00000650418.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000369569.6	MANE_select
ENST00000369569.6	alternative 5' UTR
ENST00000369567.5	FLJ36421
ENST00000479285.5	FLJ10183
ENST00000462591.1	FLJ33005
ENST00000369571.2	alternative 5' UTR
ENST00000650450.2	LR annotation
ENST00000650450.2	MANE_select
ENST00000670954.1	Assembled from SLRseq reads (SRP049776)
ENST00000653365.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426820.7	MANE_select
ENST00000426820.7	QC splicing correct
ENST00000426820.7	alternative 5' UTR
ENST00000426820.7	upstream ATG
ENST00000514621.5	alternative 5' UTR
ENST00000503968.1	alternative 5' UTR
ENST00000320334.5	MANE_select
ENST00000610121.5	FLJ39425
ENST00000610121.5	alternative 3' UTR
ENST00000607941.5	FLJ31886
ENST00000607941.5	NMD exception
ENST00000609117.5	NMD exception
ENST00000609117.5	alternative 5' UTR
ENST00000610222.3	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000610222.3	MANE_select
ENST00000610222.3	NMD exception
ENST00000608203.1	alternative 5' UTR
ENST00000609577.1	alternative 5' UTR
ENST00000608879.1	not organism-supported
ENST00000420156.2	QC splicing correct
ENST00000358465.7	MANE_select
ENST00000448034.5	FLJ13372
ENST00000369541.4	MANE_select
ENST00000393276.7	FLJ37099
ENST00000393274.6	MANE_select
ENST00000495031.5	QC splicing correct
ENST00000495031.5	non canonical TEC
ENST00000481894.1	novel transcript
ENST00000493549.1	novel transcript
ENST00000520113.6	NP_000027.2
ENST00000369538.3	FLJ39758
ENST00000639077.1	non canonical U12
ENST00000485564.3	QC splicing correct
ENST00000369535.5	MANE_select
ENST00000358528.9	MANE_select
ENST00000261443.9	alternative 5' UTR
ENST00000483407.1	novel transcript
ENST00000534699.5	alternative 5' UTR
ENST00000529046.5	alternative 5' UTR
ENST00000525132.1	alternative 5' UTR
ENST00000534389.2	alternative 5' UTR
ENST00000525878.5	alternative 5' UTR
ENST00000525970.5	alternative 5' UTR
ENST00000060969.6	MANE_select
ENST00000475335.5	novel transcript
ENST00000466657.1	novel transcript
ENST00000474562.1	novel transcript
ENST00000369522.8	MANE_select
ENST00000369518.1	alternative 5' UTR
ENST00000369518.1	alternatively spliced 5' UTR, shares CDS with RP11-109G4.1-001
ENST00000477215.5	this variant and one or more of variant fragments RP11-109G4.1-006 through 008 could be part of a single variant.
ENST00000468191.1	this variant and one or more of variant fragments RP11-109G4.1-006 through 008 could be part of a single variant.
ENST00000482717.5	this variant and one or more of variant fragments RP11-109G4.1-004, 005 and 008 could be part of a single variant.
ENST00000493377.1	this variant and one or more of variant fragments RP11-109G4.1-004, 005 and 008 could be part of a single variant.
ENST00000477590.1	this variant and one or more of variant fragments RP11-109G4.1-004 through 007 could be part of a single variant.
ENST00000256592.3	CAGE supported TSS
ENST00000256592.3	MANE_select
ENST00000369516.7	MANE_select
ENST00000649888.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000676038.2	alternative 5' UTR
ENST00000369512.3	MANE_select
ENST00000680116.1	alternative 5' UTR
ENST00000675637.2	alternative 5' UTR
ENST00000679806.1	alternative 5' UTR
ENST00000680540.1	alternative 5' UTR
ENST00000661854.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000355485.7	MANE_select
ENST00000355485.7	genebuild_only_MANE
ENST00000310260.7	alternative 5' UTR
ENST00000478369.5	novel transcript
ENST00000474344.1	novel transcript
ENST00000261448.6	MANE_select
ENST00000488931.1	novel transcript
ENST00000320238.3	MANE_select
ENST00000369506.1	alternative 5' UTR
ENST00000429731.1	alternative 5' UTR
ENST00000659309.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000634255.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671350.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438885.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659738.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669586.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665767.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000369503.9	MANE_select
ENST00000481127.1	novel transcript
ENST00000369500.3	FLJ38716
ENST00000464946.1	novel transcript
ENST00000660713.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000295598.10	MANE_select
ENST00000463382.1	novel transcript
ENST00000491156.1	novel transcript
ENST00000479960.1	novel transcript
ENST00000495965.1	novel transcript
ENST00000608511.6	Assembled from SLRseq reads (SRP049776)
ENST00000493908.2	Assembled from SLRseq reads (SRP049776)
ENST00000493908.2	novel transcript
ENST00000437308.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430316.5	novel transcript
ENST00000434879.1	novel transcript
ENST00000668577.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430107.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660250.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000369489.10	MANE_select
ENST00000457047.6	SW:P19256-3.1
ENST00000369486.8	MANE_select
ENST00000481589.1	QC splicing correct
ENST00000369478.4	MANE_select
ENST00000393203.3	KIAA1436
ENST00000393203.3	MANE_select
ENST00000445523.1	FLJ42338
ENST00000369466.9	MANE_select
ENST00000427271.1	alternative 3' UTR
ENST00000497970.5	alternative 5' UTR
ENST00000256649.9	MANE_select
ENST00000369461.3	QC splicing correct
ENST00000369461.3	upstream ATG
ENST00000359008.4	DKFZp779B1717
ENST00000369458.3	FLJ22418
ENST00000664471.1	Assembled from RACEseq reads
ENST00000657479.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000442182.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000356554.7	MANE_select
ENST00000369448.4	FLJ20202, FLJ24008
ENST00000369448.4	MANE_select
ENST00000369443.10	MANE_select
ENST00000349139.6	MANE_select
ENST00000336338.10	FLJ34497
ENST00000336338.10	MANE_select
ENST00000466857.5	novel transcript
ENST00000478697.5	novel transcript
ENST00000469128.1	novel transcript
ENST00000492438.5	novel transcript
ENST00000483383.1	novel transcript
ENST00000470550.1	novel transcript
ENST00000486589.1	novel transcript
ENST00000477444.1	novel transcript
ENST00000473472.1	novel transcript
ENST00000463628.1	novel transcript
ENST00000465053.1	novel transcript
ENST00000664031.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000369429.5	CAGE supported TSS
ENST00000369429.5	MANE_select
ENST00000369429.5	QC splicing correct
ENST00000369429.5	upstream ATG
ENST00000369426.9	QC splicing correct
ENST00000369426.9	non canonical TEC
ENST00000235521.5	MANE_select
ENST00000423984.2	QC splicing correct
ENST00000667138.1	Assembled from SLRseq reads (SRP049776)
ENST00000670000.1	Assembled from SLRseq reads (SRP049776)
ENST00000457043.1	putative novel transcript
ENST00000667936.1	Assembled from SLRseq reads (SRP049776)
ENST00000445565.2	Assembled from SLRseq reads (SRP049776)
ENST00000445565.2	putative novel transcript
ENST00000655614.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000660871.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000653227.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420059.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000325945.4	MANE_select
ENST00000369416.4	MANE_select
ENST00000531340.5	alternative 5' UTR
ENST00000369413.8	MANE_select
ENST00000528909.1	alternative 5' UTR
ENST00000421812.3	MANE_select
ENST00000641597.1	alternative 5' UTR
ENST00000641720.1	alternative 5' UTR
ENST00000641213.1	alternative 3' UTR
ENST00000641023.2	CAGE supported TSS
ENST00000641023.2	MANE_select
ENST00000641513.1	alternative 3' UTR
ENST00000641891.1	alternative 3' UTR
ENST00000641375.1	alternative 3' UTR
ENST00000462324.2	NMD likely if extended
ENST00000641247.1	alternative 3' UTR
ENST00000369407.3	FLJ35987
ENST00000641455.1	NMD likely if extended
ENST00000482968.1	FLJ26251
ENST00000369406.8	MANE_select
ENST00000256585.10	MANE_select
ENST00000354219.5	alternative 5' UTR
ENST00000530654.1	QC splicing correct
ENST00000369400.2	MANE_select
ENST00000256646.7	MANE_select
ENST00000652302.1	not best-in-genome evidence
ENST00000369390.3	MGC57827
ENST00000468129.1	novel transcript
ENST00000426275.1	QC splicing correct
ENST00000429055.1	QC splicing correct
ENST00000670866.1	Assembled from SLRseq reads (SRP049776)
ENST00000650414.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000668551.1	Assembled from SLRseq reads (SRP049776)
ENST00000664311.1	Assembled from SLRseq reads (SRP049776)
ENST00000445260.2	QC splicing correct
ENST00000437523.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666529.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000609485.1	CAGE supported TSS
ENST00000648011.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000450546.1	QC splicing correct
ENST00000413650.1	not best-in-genome evidence
ENST00000610091.1	454 RNA-Seq supported
ENST00000610091.1	nested 454 RNA-Seq supported
ENST00000595144.2	454 RNA-Seq supported
ENST00000424640.2	not best-in-genome evidence
ENST00000420598.1	not best-in-genome evidence
ENST00000413897.2	not best-in-genome evidence
ENST00000447389.1	not best-in-genome evidence
ENST00000452738.1	not best-in-genome evidence
ENST00000435913.1	not best-in-genome evidence
ENST00000424474.2	not best-in-genome evidence
ENST00000435585.1	not best-in-genome evidence
ENST00000412196.1	not best-in-genome evidence
ENST00000449527.1	not best-in-genome evidence
ENST00000453561.2	not best-in-genome evidence
ENST00000424820.1	not best-in-genome evidence
ENST00000430699.1	not best-in-genome evidence
ENST00000416527.1	not best-in-genome evidence
ENST00000421330.2	not best-in-genome evidence
ENST00000431621.2	not best-in-genome evidence
ENST00000444754.1	not best-in-genome evidence
ENST00000446530.1	not best-in-genome evidence
ENST00000411775.1	non canonical TEC
ENST00000411775.1	not best-in-genome evidence
ENST00000442663.1	not best-in-genome evidence
ENST00000423249.1	not best-in-genome evidence
ENST00000443548.1	non canonical TEC
ENST00000424068.1	not best-in-genome evidence
ENST00000432361.1	not best-in-genome evidence
ENST00000443766.3	not best-in-genome evidence
ENST00000436326.2	not best-in-genome evidence
ENST00000329536.8	not best-in-genome evidence
ENST00000428624.1	not best-in-genome evidence
ENST00000423394.1	not best-in-genome evidence
ENST00000456460.2	not best-in-genome evidence
ENST00000412492.1	not best-in-genome evidence
ENST00000421640.1	not best-in-genome evidence
ENST00000458155.1	not best-in-genome evidence
ENST00000448665.1	not best-in-genome evidence
ENST00000448844.1	not best-in-genome evidence
ENST00000415543.1	not best-in-genome evidence
ENST00000431700.1	not best-in-genome evidence
ENST00000418607.2	not best-in-genome evidence
ENST00000440862.1	not best-in-genome evidence
ENST00000429388.1	not best-in-genome evidence
ENST00000426533.2	not best-in-genome evidence
ENST00000455004.1	not best-in-genome evidence
ENST00000417260.1	not best-in-genome evidence
ENST00000400889.3	MANE_select
ENST00000441760.1	not best-in-genome evidence
ENST00000649989.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000430014.1	non canonical conserved
ENST00000437785.1	non canonical conserved
ENST00000444499.2	non canonical TEC
ENST00000444499.2	not best-in-genome evidence
ENST00000313342.7	Due to the incompletness of the current assembly in this region it is possible that this is a fragment of a functional gene.
ENST00000483630.1	not best-in-genome evidence
ENST00000468645.1	not best-in-genome evidence
ENST00000496755.1	not best-in-genome evidence
ENST00000491652.1	not best-in-genome evidence
ENST00000471873.1	not best-in-genome evidence
ENST00000524974.5	QC splicing correct
ENST00000618462.4	KIAA0454
ENST00000530062.5	QC splicing correct
ENST00000530062.5	not best-in-genome evidence
ENST00000479369.6	FLJ21253
ENST00000526664.5	QC splicing correct
ENST00000525630.5	QC splicing correct
ENST00000525630.5	non canonical TEC
ENST00000460027.1	QC splicing correct
ENST00000460027.1	non canonical TEC
ENST00000528060.1	QC splicing correct
ENST00000528060.1	not best-in-genome evidence
ENST00000647832.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000578049.4	MANE_select
ENST00000479995.2	not best-in-genome evidence
ENST00000583866.9	non canonical TEC
ENST00000611275.5	Assembled from SLRseq reads (SRP049776)
ENST00000664959.1	Assembled from SLRseq reads (SRP049776)
ENST00000667626.1	Assembled from SLRseq reads (SRP049776)
ENST00000612371.5	Assembled from SLRseq reads (SRP049776)
ENST00000667400.1	Assembled from SLRseq reads (SRP049776)
ENST00000452883.5	QC splicing correct
ENST00000452883.5	not best-in-genome evidence
ENST00000457465.3	nested 454 RNA-Seq supported
ENST00000659152.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000475797.1	alternative 5' UTR
ENST00000336751.11	MANE_select
ENST00000336751.11	upstream uORF
ENST00000636675.1	alternative 5' UTR
ENST00000421822.2	alternative 5' UTR
ENST00000582401.6	MANE_select
ENST00000369314.2	FLJ32422
ENST00000369314.2	MANE_select
ENST00000622508.4	FLJ34890
ENST00000630636.1	NMD likely if extended
ENST00000606888.3	FLJ36963, FLJ46170
ENST00000606888.3	MANE_select
ENST00000619813.1	alternative 5' UTR
ENST00000619519.1	alternative 5' UTR
ENST00000604000.4	FLJ46901, FLJ41681
ENST00000604000.4	MANE_select
ENST00000583313.7	MANE_select
ENST00000369307.4	NAGNAG splice site
ENST00000369306.8	MANE_select
ENST00000369304.8	MANE_select
ENST00000415065.2	QC splicing correct
ENST00000355594.9	FL33801
ENST00000355594.9	MANE_select
ENST00000475261.1	FLJ43168
ENST00000393045.7	MANE_select
ENST00000463514.2	QC splicing correct
ENST00000334513.6	MANE_select
ENST00000444015.2	QC splicing correct
ENST00000444015.2	non canonical conserved
ENST00000334163.4	MANE_select
ENST00000489436.1	novel transcript
ENST00000479819.1	putative novel transcript
ENST00000582693.5	MANE_select
ENST00000369288.7	MANE_select
ENST00000417171.6	MANE_select
ENST00000417171.6	alternative 5' UTR
ENST00000313835.14	MANE_select
ENST00000466593.5	QC splicing correct
ENST00000462900.2	alternative 5' UTR
ENST00000478703.5	novel transcript
ENST00000493684.5	FLJ10492
ENST00000422044.2	non canonical TEC
ENST00000657459.1	Assembled from SLRseq reads (SRP049776)
ENST00000604517.1	not best-in-genome evidence
ENST00000496508.1	FLJ34369
ENST00000598804.2	454 RNA-Seq supported
ENST00000598804.2	nested 454 RNA-Seq supported
ENST00000425109.2	QC splicing correct
ENST00000425109.2	not best-in-genome evidence
ENST00000455718.2	QC splicing correct
ENST00000254101.4	MANE_select
ENST00000649713.1	pseudogene transcript
ENST00000440377.2	pseudogene transcript
ENST00000606856.1	CAGE supported TSS
ENST00000606757.1	CAGE supported TSS
ENST00000527849.5	QC splicing correct
ENST00000441068.6	NP_001138301.1
ENST00000369272.7	NP_001138302.1
ENST00000254090.9	MANE_select
ENST00000533174.5	alternative 5' UTR
ENST00000533848.2	alternative 5' UTR
ENST00000369258.8	CAGE supported TSS
ENST00000369258.8	LR annotation
ENST00000369258.8	MANE_select
ENST00000431239.6	CAGE supported TSS
ENST00000234739.8	MANE_select
ENST00000583509.7	MANE_select
ENST00000493129.2	QC splicing correct
ENST00000579774.3	MANE_select
ENST00000369235.2	MANE_select
ENST00000488165.5	FLJ11696
ENST00000478307.5	non canonical TEC
ENST00000314163.12	MANE_select
ENST00000491975.5	novel transcript
ENST00000490955.1	novel transcript
ENST00000425209.1	Transcribed pseudogene Em:AK126719.1
ENST00000665117.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659447.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668298.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000369228.5	NP_001095133.2
ENST00000663793.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665006.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657111.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668803.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653344.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656778.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000597931.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000595367.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663602.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663701.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663831.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000599864.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659506.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608244.1	nested 454 RNA-Seq supported
ENST00000443671.2	non canonical TEC
ENST00000648583.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000654570.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662680.1	Assembled from SLRseq reads (SRP049776)
ENST00000653053.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000635587.1	non canonical other
ENST00000426101.5	QC splicing correct
ENST00000426101.5	not best-in-genome evidence
ENST00000445243.1	QC splicing correct
ENST00000445243.1	not best-in-genome evidence
ENST00000638752.1	not best-in-genome evidence
ENST00000584068.3	not best-in-genome evidence
ENST00000427732.1	QC splicing correct
ENST00000427732.1	not best-in-genome evidence
ENST00000369202.1	Final six exons form part of a repeating six exon unit represented numerous times in the genomic sequence
ENST00000369202.1	variant not based on a single mRNA but rather represents all possible exons at this locus
ENST00000415104.1	not best-in-genome evidence
ENST00000581164.1	MANE_select
ENST00000581164.1	not best-in-genome evidence
ENST00000664186.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000456469.1	QC splicing correct
ENST00000456469.1	not best-in-genome evidence
ENST00000424684.1	not best-in-genome evidence
ENST00000609585.1	CAGE supported TSS
ENST00000444624.1	not best-in-genome evidence
ENST00000492131.1	novel transcript
ENST00000447883.2	not best-in-genome evidence
ENST00000428508.1	not best-in-genome evidence
ENST00000414422.1	not best-in-genome evidence
ENST00000430052.1	not best-in-genome evidence
ENST00000443602.2	not best-in-genome evidence
ENST00000369168.5	MANE_select
ENST00000469483.1	potentialy coding
ENST00000331491.2	MANE_select
ENST00000369159.2	CCDS934.1
ENST00000331380.4	MANE_select
ENST00000331128.6	MANE_select
ENST00000369152.6	MANE_select
ENST00000369146.8	MANE_select
ENST00000271628.9	MANE_select
ENST00000439741.4	MANE_select
ENST00000581312.6	MANE_select
ENST00000648868.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648868.1	non canonical U12
ENST00000643984.2	Assembled from SLRseq reads (SRP049776)
ENST00000642888.2	Assembled from SLRseq reads (SRP049776)
ENST00000644510.2	CAGE supported TSS
ENST00000644510.2	LR annotation
ENST00000644510.2	MANE_select
ENST00000369124.5	MANE_select
ENST00000647691.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000583931.6	MANE_select
ENST00000616917.4	NP_001129951.1
ENST00000436748.6	NP_001129950.1
ENST00000647854.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000369111.9	MANE_select
ENST00000483993.3	QC splicing correct
ENST00000483993.3	non canonical TEC
ENST00000607082.1	NAGNAG splice site
ENST00000369109.8	MANE_select
ENST00000369102.5	RP4-790G17.4-001
ENST00000369102.5	alternative 5' UTR
ENST00000369099.8	MANE_select
ENST00000447007.5	alternative 5' UTR
ENST00000290363.6	MANE_select
ENST00000290363.6	alternative 5' UTR
ENST00000417398.5	alternative 5' UTR
ENST00000614145.5	MANE_select
ENST00000581066.2	alternative 5' UTR
ENST00000324862.7	MANE_select
ENST00000369064.8	MANE_select
ENST00000369051.7	QC splicing correct
ENST00000369047.9	MANE_select
ENST00000416894.1	CAGE supported TSS
ENST00000271643.9	MANE_select
ENST00000615012.1	CAGE supported TSS
ENST00000369026.3	MANE_select
ENST00000369016.8	QC splicing correct
ENST00000369014.10	MANE_select
ENST00000361532.9	SW:O43768-5.1
ENST00000361631.9	SW:O43768-7.1
ENST00000339643.9	NP_996925.1
ENST00000339643.9	SW:O43768-3.1
ENST00000356527.9	SW:O43768-4.1
ENST00000513281.5	CCDS964.1
ENST00000513281.5	SW:O43768-6.1
ENST00000505321.1	QC splicing correct
ENST00000503345.1	alternative 3' UTR
ENST00000503241.1	NP_996926.1
ENST00000271732.8	MANE_select
ENST00000361824.7	MANE_select
ENST00000368985.8	MANE_select
ENST00000607427.2	alternative 3' UTR
ENST00000681444.1	alternative 3' UTR
ENST00000676966.1	alternative 5' UTR
ENST00000271651.8	MANE_select
ENST00000676824.1	alternative 5' UTR
ENST00000358595.10	MANE_select
ENST00000471844.6	non canonical TEC
ENST00000525956.5	alternative 5' UTR
ENST00000448029.5	alternative 5' UTR
ENST00000498193.5	alternative 5' UTR
ENST00000482825.7	QC splicing correct
ENST00000482825.7	non canonical TEC
ENST00000368954.10	MANE_select
ENST00000368949.8	alternative 5' UTR
ENST00000361419.9	alternative 5' UTR
ENST00000559660.1	QC splicing correct
ENST00000558062.5	alternative 5' UTR
ENST00000421609.5	alternative 5' UTR
ENST00000457392.1	alternative 5' UTR
ENST00000368947.9	MANE_select
ENST00000470877.1	QC splicing correct
ENST00000271620.8	MANE_select
ENST00000650332.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000650563.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000368931.8	MANE_select
ENST00000361277.9	QC splicing correct
ENST00000392802.3	alternative 5' UTR
ENST00000368926.6	MANE_select
ENST00000357235.6	MANE_select
ENST00000357235.6	genebuild_only_MANE
ENST00000368921.5	MANE_select
ENST00000368918.8	MANE_select
ENST00000341697.7	KIAA1869
ENST00000341697.7	alternative 5' UTR
ENST00000341697.7	alternatively spliced 5' UTR, shares CDS with RP11-68I18.3-001
ENST00000368914.8	MANE_select
ENST00000368910.4	MANE_select
ENST00000602841.5	alternative 5' UTR
ENST00000461862.5	this variant and variant fragment RP11-68I18.6-005 could be part of a single variant.
ENST00000471039.1	this variant and one of variant fragments RP11-68I18.6-005 and 006 could be part of a single variant.
ENST00000368905.9	MANE_select
ENST00000497147.1	this variant and variant fragment RP11-68I18.6-003 could be part of a single variant.
ENST00000459799.1	this variant and variant fragment RP11-68I18.6-002 could be part of a single variant
ENST00000368908.10	MANE_select
ENST00000440902.2	NP_001130015.1
ENST00000295314.9	MANE_select
ENST00000368892.9	MANE_select
ENST00000496809.5	QC splicing correct
ENST00000368888.9	MANE_select
ENST00000441902.6	NP_001129108.1
ENST00000418435.1	QC splicing correct
ENST00000486048.2	QC splicing correct
ENST00000486048.2	non canonical TEC
ENST00000368884.8	MANE_select
ENST00000469786.2	QC splicing correct
ENST00000469786.2	non canonical TEC
ENST00000661167.1	Assembled from SLRseq reads (SRP049776)
ENST00000660511.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000449313.5	QC splicing correct
ENST00000336715.11	KIAA1441
ENST00000336715.11	MANE_select
ENST00000324048.9	variant 2; alternatively spliced in 5' UTR
ENST00000426871.1	FLJ13043
ENST00000436614.1	not organism-supported
ENST00000368875.6	NP_002642.1
ENST00000368872.5	alternative 5' UTR
ENST00000489223.2	alternative 5' UTR
ENST00000438243.2	alternative 5' UTR
ENST00000609583.1	CAGE supported TSS
ENST00000452671.7	MANE_select
ENST00000452671.7	alternative 5' UTR
ENST00000452671.7	alternatively spliced 5' UTR, shared CDS with RP11-126K1.5-001
ENST00000368870.6	QC splicing correct
ENST00000368868.10	MANE_select
ENST00000474352.5	FLJ13813
ENST00000443708.5	QC splicing correct
ENST00000455397.5	QC splicing correct
ENST00000427977.6	QC splicing correct
ENST00000423070.5	QC splicing correct
ENST00000427867.2	QC splicing correct
ENST00000290541.7	MANE_select
ENST00000271715.7	MANE_select
ENST00000485040.5	FLJ20192
ENST00000533461.5	alternative 5' UTR
ENST00000533351.5	QC splicing correct
ENST00000533351.5	alternative 5' UTR
ENST00000427934.2	QC splicing correct
ENST00000271636.12	MANE_select
ENST00000416743.1	QC splicing correct
ENST00000368849.8	MANE_select
ENST00000458013.7	MANE_select
ENST00000642349.1	alternative 3' UTR
ENST00000504583.2	QC splicing correct
ENST00000290583.9	MANE_select
ENST00000326413.7	FLJ36032
ENST00000326413.7	NMD exception
ENST00000479191.2	MANE_select
ENST00000479191.2	NMD exception
ENST00000479191.2	NP_001138428
ENST00000368830.8	MANE_select
ENST00000467306.5	FLJ22710
ENST00000635322.1	non canonical other
ENST00000321531.10	NP_001128411.1
ENST00000321531.10	non canonical other
ENST00000453029.2	NP_001288300.1
ENST00000453029.2	non canonical other
ENST00000479764.7	FLJ43888
ENST00000479764.7	non canonical other
ENST00000400999.7	NP_057262.2
ENST00000400999.7	non canonical other
ENST00000577465.1	NMD likely if extended
ENST00000635374.1	non canonical other
ENST00000368825.7	NP_001077433
ENST00000368823.5	FLJ31840
ENST00000368823.5	RP11-98D18.8-001
ENST00000368824.8	MANE_select
ENST00000368822.5	RP11-98D18.8-001
ENST00000368822.5	alternative 5' UTR
ENST00000458431.6	alternative 5' UTR
ENST00000526378.5	alternative 5' UTR
ENST00000660232.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000601909.1	not organism-supported
ENST00000368820.4	MANE_select
ENST00000356728.11	CAGE supported TSS
ENST00000356728.11	LR annotation
ENST00000318247.7	CAGE supported TSS
ENST00000318247.7	LR annotation
ENST00000318247.7	MANE_select
ENST00000434182.1	QC splicing correct
ENST00000368817.10	MANE_select
ENST00000368814.8	MANE_select
ENST00000471464.5	novel transcript
ENST00000477437.1	novel transcript
ENST00000648930.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000662071.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000368811.8	MANE_select
ENST00000368809.1	QC splicing correct
ENST00000368809.1	alternative 5' UTR
ENST00000271638.3	MANE_select
ENST00000368806.2	MANE_select
ENST00000316073.3	MANE_select
ENST00000655109.1	Assembled from SLRseq reads (SRP049776)
ENST00000630125.3	Assembled from SLRseq reads (SRP049776)
ENST00000669062.1	Assembled from SLRseq reads (SRP049776)
ENST00000664213.1	Assembled from SLRseq reads (SRP049776)
ENST00000669830.1	Assembled from SLRseq reads (SRP049776)
ENST00000653548.1	Assembled from SLRseq reads (SRP049776)
ENST00000659844.1	Assembled from SLRseq reads (SRP049776)
ENST00000666686.1	Assembled from SLRseq reads (SRP049776)
ENST00000665223.1	Assembled from SLRseq reads (SRP049776)
ENST00000392688.7	Assembled from SLRseq reads (SRP049776)
ENST00000658099.1	Assembled from SLRseq reads (SRP049776)
ENST00000629331.1	AMRLUBWKP01
ENST00000368801.4	MANE_select
ENST00000368799.2	MANE_select
ENST00000388718.5	MANE_select
ENST00000388718.5	QC splicing correct
ENST00000271835.3	MANE_select
ENST00000334269.3	MANE_select
ENST00000368790.4	MANE_select
ENST00000368789.2	MANE_select
ENST00000368787.4	MANE_select
ENST00000335633.1	MANE_select
ENST00000335633.1	confirm experimentally
ENST00000335674.1	MANE_select
ENST00000368784.2	MANE_select
ENST00000368780.4	MANE_select
ENST00000368779.2	MANE_select
ENST00000368775.3	166448  166477
ENST00000368775.3	167343  168312
ENST00000368775.3	MANE_select
ENST00000368771.1	alternative 5' UTR
ENST00000368770.4	MANE_select
ENST00000326233.7	MANE_select
ENST00000326233.7	QC splicing correct
ENST00000360090.4	MANE_select
ENST00000335123.4	MANE_select
ENST00000335123.4	QC splicing correct
ENST00000431011.3	MANE_select
ENST00000368765.4	MANE_select
ENST00000328051.3	MANE_select
ENST00000295367.5	MANE_select
ENST00000443178.1	alternative 5' UTR
ENST00000443178.1	alternative 5' UTR; shares CDS with RP1-20N18.3-001
ENST00000307098.5	MANE_select
ENST00000360379.4	MANE_select
ENST00000368758.3	RP1-20N18.9-003
ENST00000368757.1	RP1-20N18.9-004
ENST00000368756.1	RP1-20N18.9-004
ENST00000392653.3	MANE_select
ENST00000368755.2	QC splicing correct
ENST00000368750.8	MANE_select
ENST00000468739.2	MANE_select
ENST00000368748.5	MANE_select
ENST00000368747.2	MANE_select
ENST00000368744.4	MANE_select
ENST00000368742.4	MANE_select
ENST00000359650.10	MANE_select
ENST00000490266.1	novel transcript
ENST00000368738.4	MANE_select
ENST00000368737.5	MANE_select
ENST00000368732.5	alternative 5' UTR
ENST00000368733.4	MANE_select
ENST00000368729.9	MANE_select
ENST00000368728.2	QC splicing correct
ENST00000368728.2	alternative 5' UTR
ENST00000368728.2	not best-in-genome evidence
ENST00000329256.2	alternative 5' UTR
ENST00000368725.3	upstream ATG
ENST00000368722.5	alternative 5' UTR
ENST00000368723.4	MANE_select
ENST00000368719.9	MANE_select
ENST00000496817.5	alternative 5' UTR
ENST00000368720.6	alternative 5' UTR
ENST00000462776.2	alternative 5' UTR
ENST00000368717.2	alternative 5' UTR
ENST00000368715.5	alternative 5' UTR
ENST00000354332.8	alternative 5' UTR
ENST00000468373.1	Novel transcript
ENST00000368716.9	MANE_select
ENST00000368713.8	MANE_select
ENST00000368712.1	alternative 5' UTR
ENST00000368708.9	MANE_select
ENST00000368708.9	alternative 5' UTR
ENST00000487430.7	alternative 5' UTR
ENST00000487430.7	upstream uORF
ENST00000368709.6	alternative 5' UTR
ENST00000647794.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000368704.5	alternative 5' UTR
ENST00000368706.9	MANE_select
ENST00000368706.9	alternative 5' UTR
ENST00000368703.6	alternative 5' UTR
ENST00000368705.2	alternative 5' UTR
ENST00000344616.4	MANE_select
ENST00000344616.4	genebuild_only_MANE
ENST00000339556.8	QC splicing correct
ENST00000497086.5	CAGE supported TSS
ENST00000292169.6	MANE_select
ENST00000469931.2	CAGE supported TSS
ENST00000368694.8	MANE_select
ENST00000368685.6	MANE_select
ENST00000361891.9	MANE_select
ENST00000368680.4	MANE_select
ENST00000318967.7	MANE_select
ENST00000435409.6	alternative 5' UTR
ENST00000484014.5	QC splicing correct
ENST00000624995.4	CAGE supported TSS
ENST00000624995.4	MANE_select
ENST00000624995.4	upstream ATG
ENST00000524676.1	QC splicing correct
ENST00000368655.5	MANE_select
ENST00000634544.1	alternative 5' UTR
ENST00000634564.1	NAGNAG splice site
ENST00000634401.1	alternative 5' UTR
ENST00000634791.1	alternative 5' UTR
ENST00000637331.1	alternative 5' UTR
ENST00000361217.9	MANE_select
ENST00000368646.6	QC splicing correct
ENST00000303569.10	QC splicing correct
ENST00000461638.6	QC splicing correct
ENST00000461638.6	non canonical U12
ENST00000368633.2	MANE_select
ENST00000368633.2	QC splicing correct
ENST00000368633.2	non canonical U12
ENST00000487235.5	QC splicing correct
ENST00000487235.5	non canonical U12
ENST00000476883.5	QC splicing correct
ENST00000476883.5	non canonical U12
ENST00000492073.1	QC splicing correct
ENST00000492073.1	non canonical U12
ENST00000368623.7	Alternatively spliced 5' UTR, shares CDS with RP11-422P24.7-001
ENST00000368623.7	alternative 5' UTR
ENST00000356205.9	MANE_select
ENST00000368621.5	Alternatively spliced 5' UTR, shares CDS with RP11-422P24.7-001
ENST00000368621.5	alternative 5' UTR
ENST00000310483.10	Alternatively spliced 5' UTR, shares CDS with RP11-422P24.7-001
ENST00000310483.10	alternative 5' UTR
ENST00000413622.5	Alternatively spliced 5' UTR, shares CDS with RP11-422P24.7-001 (partial)
ENST00000413622.5	alternative 5' UTR
ENST00000417348.2	Alternatively spliced 5' UTR, shares CDS with RP11-422P24.7-001 (partial)
ENST00000417348.2	alternative 5' UTR
ENST00000648921.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000633140.1	CAGE supported TSS
ENST00000449724.5	Alternatively spliced 5' UTR, shares CDS with RP11-422P24.8-004 (partial)
ENST00000449724.5	alternative 5' UTR
ENST00000368607.8	Alternatively spliced 5' UTR, shares CDS with RP11-422P24.8-001
ENST00000368607.8	MANE_select
ENST00000368607.8	alternative 5' UTR
ENST00000368603.5	Alternatively spliced 5' UTR, shares CDS with RP11-422P24.8-001
ENST00000368603.5	alternative 5' UTR
ENST00000431292.1	Alternatively spliced 5' UTR, shares CDS with RP11-422P24.8-001 (partial)
ENST00000431292.1	alternative 5' UTR
ENST00000271843.9	MANE_select
ENST00000428469.1	alternative 5' UTR
ENST00000648869.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000608236.1	CAGE supported TSS
ENST00000368575.5	MANE_select
ENST00000651669.1	CAGE supported TSS
ENST00000651669.1	LR annotation
ENST00000651669.1	MANE_select
ENST00000330188.13	QC splicing correct
ENST00000302206.9	CAGE supported TSS
ENST00000368531.6	NP_001036817.1
ENST00000651641.1	LR annotation
ENST00000651641.1	MANE_select
ENST00000515609.1	alternative 5' UTR
ENST00000368525.4	MANE_select
ENST00000648267.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000368521.10	MANE_select
ENST00000428931.6	MANE_select
ENST00000428931.6	genebuild_only_MANE
ENST00000328703.12	MANE_select
ENST00000324978.8	MANE_select
ENST00000368489.6	MANE_select
ENST00000368489.6	NP_065185.1
ENST00000368487.7	NP_001005855.1
ENST00000426445.1	QC splicing correct
ENST00000368485.8	MANE_select
ENST00000304760.3	5' end considerably extended by using match with mouse cDNA Em:AK034662.1
ENST00000304760.3	MANE_select
ENST00000368482.8	MANE_select
ENST00000368482.8	NP_872305.3
ENST00000368480.3	NP_001091945.1
ENST00000292211.5	MANE_select
ENST00000664303.1	Assembled from SLRseq reads (SRP049776)
ENST00000666466.1	Assembled from SLRseq reads (SRP049776)
ENST00000659429.1	Assembled from SLRseq reads (SRP049776)
ENST00000368476.4	MANE_select
ENST00000681235.1	alternative 3' UTR
ENST00000680270.1	alternative 5' UTR
ENST00000681056.1	alternative 5' UTR
ENST00000368474.9	CAGE supported TSS
ENST00000368474.9	LR annotation
ENST00000368474.9	MANE_select
ENST00000648231.2	alternative 5' UTR
ENST00000368471.8	CAGE supported TSS
ENST00000368471.8	LR annotation
ENST00000649022.2	alternative 5' UTR
ENST00000649042.1	alternative 5' UTR
ENST00000649749.1	alternative 5' UTR
ENST00000648311.1	alternative 5' UTR
ENST00000648311.1	upstream ATG
ENST00000649724.1	alternative 5' UTR
ENST00000649724.1	upstream ATG
ENST00000681683.1	alternative 5' UTR
ENST00000648871.1	alternative 5' UTR
ENST00000653192.1	Assembled from SLRseq reads (SRP049776)
ENST00000271915.9	MANE_select
ENST00000368467.4	MANE_select
ENST00000368463.8	MANE_select
ENST00000368457.3	MANE_select
ENST00000448116.7	MANE_select
ENST00000368449.8	QC splicing correct
ENST00000368449.8	non canonical TEC
ENST00000308987.6	MANE_select
ENST00000292180.8	MANE_select
ENST00000392487.1	Paper PMID: 10655141 have showed expression of protein in rat and discuss conservation in human and mouse
ENST00000485982.5	FLJ32934
ENST00000368424.4	FLJ40149
ENST00000368424.4	MANE_select
ENST00000368423.5	FLJ40674
ENST00000525273.5	QC splicing correct
ENST00000525273.5	non canonical TEC
ENST00000295542.6	MANE_select
ENST00000423025.6	NP_001137159.1
ENST00000449910.6	NP_997079.1
ENST00000359280.8	NP_997078.1
ENST00000360674.8	NP_997074.1
ENST00000355956.6	NP_997077.1
ENST00000368413.5	QC splicing correct
ENST00000356955.7	MANE_select
ENST00000356955.7	NP_997080.1
ENST00000368409.8	MANE_select
ENST00000368408.4	MANE_select
ENST00000368407.8	MANE_select
ENST00000475824.6	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000368404.9	MANE_select
ENST00000368400.5	MANE_select
ENST00000341298.3	alternative 5' UTR
ENST00000341298.3	alternatively spliced 5' UTR, shares CDS with RP11-540D14.7-001
ENST00000295682.6	MANE_select
ENST00000490672.2	FLJ14105
ENST00000334634.9	MANE_select
ENST00000620103.4	QC splicing correct
ENST00000447623.2	CAGE supported TSS
ENST00000368378.7	MANE_select
ENST00000465596.1	NMD likely if extended
ENST00000368376.8	MANE_select
ENST00000424959.5	CAGE supported TSS
ENST00000609421.1	CAGE supported TSS
ENST00000368373.8	MANE_select
ENST00000327247.9	alternative 5' UTR
ENST00000484489.5	QC splicing correct
ENST00000361361.7	CCDS1103.1
ENST00000361361.7	MANE_select
ENST00000302631.8	MANE_select
ENST00000368361.9	MANE_select
ENST00000368358.4	MANE_select
ENST00000496230.5	FLJ31278
ENST00000342741.6	LR annotation
ENST00000342741.6	MANE_select
ENST00000447866.5	alternative 5' UTR
ENST00000368356.9	MANE_select
ENST00000368356.9	alternative 5' UTR
ENST00000467076.5	alternative 5' UTR
ENST00000487002.1	FLJ12779, FLJ11766
ENST00000491013.5	alternative 5' UTR
ENST00000465559.5	alternative 5' UTR
ENST00000543656.2	Assembled from SLRseq reads (SRP049776)
ENST00000368352.10	MANE_select
ENST00000368354.7	FLJ43388
ENST00000462780.5	FLJ36458
ENST00000368349.8	CAGE supported TSS
ENST00000490373.5	CAGE supported TSS
ENST00000479924.5	CAGE supported TSS
ENST00000468764.5	CAGE supported TSS
ENST00000471876.5	CAGE supported TSS
ENST00000471876.5	FLJ90004
ENST00000392403.8	MANE_select
ENST00000677825.1	NAGNAG splice site
ENST00000456382.2	QC splicing correct
ENST00000488901.5	novel transcript
ENST00000649846.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000649846.1	NAGNAG splice site
ENST00000245564.8	MANE_select
ENST00000368341.8	QC splicing correct
ENST00000368341.8	non canonical TEC
ENST00000490642.5	novel transcript
ENST00000491308.5	novel transcript
ENST00000483832.5	novel transcript
ENST00000465137.5	novel transcript
ENST00000473327.5	novel transcript
ENST00000483734.5	novel transcript
ENST00000475253.5	novel transcript
ENST00000466815.1	novel transcript
ENST00000668003.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000347088.9	alternative 5' UTR
ENST00000359205.9	alternative 5' UTR
ENST00000368330.6	alternative 5' UTR
ENST00000355499.9	MANE_select
ENST00000355499.9	alternative 5' UTR
ENST00000443231.5	alternative 5' UTR
ENST00000454523.5	alternative 5' UTR
ENST00000461479.1	QC splicing correct
ENST00000471214.5	alternative 5' UTR
ENST00000471214.5	upstream uORF
ENST00000343043.7	alternative 5' UTR
ENST00000368336.10	MANE_select
ENST00000491777.2	alternative 3' UTR
ENST00000432858.1	QC splicing correct
ENST00000314835.5	expressed pseudogene (AF111708)
ENST00000368331.6	MANE_select
ENST00000437809.5	alternative 5' UTR
ENST00000473267.1	novel transcript
ENST00000460075.1	novel transcript
ENST00000483032.1	novel transcript
ENST00000361040.9	FLJ20203
ENST00000471341.5	novel transcript
ENST00000497369.5	novel transcript
ENST00000490801.1	novel transcript
ENST00000496021.1	novel transcript
ENST00000482386.5	novel transcript
ENST00000466224.1	novel transcript
ENST00000467009.1	FLJ23040
ENST00000468867.1	novel transcript
ENST00000488251.1	novel transcript
ENST00000368324.5	MANE_select
ENST00000368323.8	CAGE supported TSS
ENST00000368323.8	LR annotation
ENST00000368323.8	MANE_select
ENST00000461050.5	QC splicing correct
ENST00000609492.1	alternative 5' UTR
ENST00000651833.1	alternative 5' UTR
ENST00000368320.7	KIAA0907
ENST00000368321.8	KIAA0907
ENST00000368321.8	MANE_select
ENST00000478002.5	novel transcript
ENST00000466520.1	novel transcript
ENST00000465953.1	novel transcript
ENST00000483237.1	novel transcript
ENST00000482337.5	novel transcript
ENST00000491599.1	QC splicing correct
ENST00000491599.1	non canonical TEC
ENST00000368318.5	MANE_select
ENST00000361247.9	MANE_select
ENST00000361247.9	NAGNAG splice site
ENST00000462460.6	CAGE supported TSS
ENST00000462460.6	NAGNAG splice site
ENST00000673475.1	CAGE supported TSS
ENST00000673475.1	downstream ATG
ENST00000474428.6	NMD likely if extended
ENST00000471589.5	NAGNAG splice site
ENST00000497907.5	NAGNAG splice site
ENST00000476273.1	NAGNAG splice site
ENST00000476273.1	NMD likely if extended
ENST00000609707.1	CAGE supported TSS
ENST00000610146.1	CAGE supported TSS
ENST00000650235.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000671325.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664369.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000295702.9	MANE_select
ENST00000295702.9	alternative 5' UTR
ENST00000529008.5	QC splicing correct
ENST00000480567.5	alternative 5' UTR
ENST00000531917.5	alternative 5' UTR
ENST00000526212.2	QC splicing correct
ENST00000368309.4	MANE_select
ENST00000472638.1	NMD likely if extended
ENST00000368305.9	MANE_select
ENST00000489664.1	novel transcript
ENST00000487106.5	novel transcript
ENST00000463371.1	novel transcript
ENST00000361084.10	MANE_select
ENST00000532414.3	MANE_select
ENST00000676385.2	align_id:3528082|asmbl_18247
ENST00000515711.1	QC splicing correct
ENST00000676434.1	align_id:3528090|asmbl_18255
ENST00000676208.1	align_id:3528091|asmbl_18256
ENST00000674600.1	align_id:3528092|asmbl_18257
ENST00000361308.9	align_id:3528074|asmbl_18239
ENST00000677389.1	CAGE supported TSS
ENST00000677389.1	LR annotation
ENST00000368300.9	MANE_select
ENST00000448611.6	CAGE supported TSS
ENST00000515459.5	CAGE supported TSS
ENST00000368297.5	CAGE supported TSS
ENST00000504687.6	CAGE supported TSS
ENST00000473598.6	CAGE supported TSS
ENST00000633494.1	alternative 5' UTR
ENST00000485575.1	novel transcript
ENST00000368285.8	FLJ12287
ENST00000368285.8	MANE_select
ENST00000484155.1	putative novel transcript
ENST00000359511.4	KIAA0446
ENST00000469537.1	novel transcript
ENST00000482737.1	putative novel transcript
ENST00000368272.5	MANE_select
ENST00000292291.10	MANE_select
ENST00000492619.5	novel transcript
ENST00000340183.10	novel transcript
ENST00000491107.6	novel protein
ENST00000468632.5	novel transcript
ENST00000480773.5	novel transcript
ENST00000470198.5	novel transcript
ENST00000475507.1	novel transcript
ENST00000361813.5	MANE_select
ENST00000489907.2	NMD likely if extended
ENST00000463670.5	novel transcript
ENST00000295694.9	MGC13102
ENST00000495881.1	novel transcript
ENST00000456810.1	variant 5; alternatively spliced in 5' UTR
ENST00000405535.3	MANE_select
ENST00000405535.3	genebuild_only_MANE
ENST00000485135.1	novel transcript
ENST00000497831.1	novel transcript
ENST00000472870.5	QC splicing correct
ENST00000647767.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000480968.1	putative novel transcript
ENST00000362007.6	MANE_select
ENST00000476177.6	non canonical TEC
ENST00000339922.5	MANE_select
ENST00000339922.5	confirm experimentally
ENST00000295688.8	MANE_select
ENST00000368261.7	QC splicing correct
ENST00000368261.7	non canonical TEC
ENST00000496684.6	NAGNAG splice site
ENST00000496684.6	QC splicing correct
ENST00000533194.5	QC splicing correct
ENST00000533194.5	non canonical TEC
ENST00000415548.1	QC splicing correct
ENST00000368256.3	QC splicing correct
ENST00000368253.6	alternative 5' UTR
ENST00000368254.6	MANE_select
ENST00000368254.6	alternative 5' UTR
ENST00000368252.5	alternative 5' UTR
ENST00000368251.1	QC splicing correct
ENST00000368251.1	alternative 5' UTR
ENST00000537040.6	MANE_select
ENST00000537040.6	suspected genomic sequence error affecting CDS in exon 9
ENST00000451362.1	CAGE supported TSS
ENST00000471156.5	novel transcript
ENST00000497824.5	novel transcript
ENST00000465270.5	novel transcript
ENST00000462458.5	novel transcript
ENST00000486517.5	novel transcript
ENST00000465570.1	novel transcript
ENST00000498346.1	novel transcript
ENST00000497822.5	novel transcript
ENST00000492750.5	novel transcript
ENST00000464238.5	novel transcript
ENST00000482932.5	novel transcript
ENST00000489918.1	novel transcript
ENST00000484428.5	novel transcript
ENST00000489877.5	novel transcript
ENST00000476966.5	novel transcript
ENST00000463309.5	novel transcript
ENST00000464203.1	novel transcript
ENST00000469813.1	novel transcript
ENST00000495000.1	putative novel transcript
ENST00000663987.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000441085.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656222.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452465.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667036.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000464356.6	QC splicing correct
ENST00000348159.9	MANE_select
ENST00000489057.1	alternative 5' UTR
ENST00000361170.7	MANE_select
ENST00000368236.8	CAGE supported TSS
ENST00000368236.8	MANE_select
ENST00000368236.8	confirm experimentally
ENST00000495690.6	NMD likely if extended
ENST00000478081.1	QC splicing correct
ENST00000368235.8	MANE_select
ENST00000368232.9	MANE_select
ENST00000368232.9	NP_872620.1
ENST00000438976.6	NP_056405.2
ENST00000487988.5	novel transcript
ENST00000255039.6	MANE_select
ENST00000456112.1	alternative 5' UTR
ENST00000482204.1	novel transcript
ENST00000494218.1	novel transcript
ENST00000441358.5	alternative 5' UTR
ENST00000457777.6	alternative 5' UTR
ENST00000329117.10	MANE_select
ENST00000479949.5	QC splicing correct
ENST00000368223.4	MANE_select
ENST00000441272.2	QC splicing correct
ENST00000650347.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000368222.8	MANE_select
ENST00000472824.2	QC splicing correct
ENST00000368219.2	MANE_select
ENST00000368219.2	alternative 5' UTR
ENST00000496538.1	novel transcript
ENST00000470713.1	novel transcript
ENST00000469074.1	novel transcript
ENST00000368218.8	NP_001136032.1
ENST00000368216.9	MANE_select
ENST00000476229.5	novel transcript
ENST00000462397.1	putative novel transcript
ENST00000497515.1	putative novel transcript
ENST00000361531.6	MANE_select
ENST00000357325.10	MANE_select
ENST00000271526.9	MANE_select
ENST00000661978.1	Assembled from SLRseq reads (SRP049776)
ENST00000368199.8	MANE_select
ENST00000489021.6	NMD likely if extended
ENST00000392302.7	NP_001007793.1
ENST00000674537.1	align_id:3528461|asmbl_18626
ENST00000524377.7	MANE_select
ENST00000675461.1	PacBio_RACEseq_UKGTN_Kidney_reads
ENST00000675461.1	m160402_005527_42182_c100987172550000001823224907191661_s1_p0/155732/ccs
ENST00000368195.4	MANE_select
ENST00000455314.5	alternative 5' UTR
ENST00000337428.8	MANE_select
ENST00000490146.5	FLJ32884
ENST00000490146.5	novel transcript
ENST00000476550.1	novel transcript
ENST00000472465.1	putative novel transcript
ENST00000368194.8	MANE_select
ENST00000454449.3	MANE_select
ENST00000368192.9	MANE_select
ENST00000662441.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670336.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662968.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000361835.8	MANE_select
ENST00000461387.5	novel transcript (FLJ00397)
ENST00000497286.5	novel transcript (FLJ00333)
ENST00000271532.2	MANE_select
ENST00000448509.6	novel transcript
ENST00000479869.1	novel transcript
ENST00000480682.5	novel transcript
ENST00000494724.5	novel transcript
ENST00000368184.8	FLJ43634
ENST00000368184.8	MANE_select
ENST00000368184.8	alternative 3' UTR
ENST00000368184.8	alternatively spliced 3' UTR, shares CDS with RP11-367J7.1-001
ENST00000473231.5	novel transcript
ENST00000468507.1	novel transcript
ENST00000496769.1	alternative 5' UTR
ENST00000361516.8	MANE_select
ENST00000463001.5	novel transcript
ENST00000368176.8	MANE_select
ENST00000489998.5	novel transcript
ENST00000368175.7	novel transcript
ENST00000495126.1	novel transcript
ENST00000480310.1	novel transcript
ENST00000368174.5	MANE_select
ENST00000360089.8	non canonical TEC
ENST00000359209.11	MANE_select
ENST00000672824.1	CAGE supported TSS
ENST00000656134.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670135.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665549.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000414848.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666137.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655195.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656498.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658278.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000442358.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663787.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654630.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000368171.5	alternative 5' UTR
ENST00000673723.4	alternative 3' UTR
ENST00000674085.2	MANE_select
ENST00000289429.6	MANE_select
ENST00000368170.8	MANE_select
ENST00000368168.4	MANE_select
ENST00000368167.8	MANE_select
ENST00000464822.1	QC splicing correct
ENST00000334438.1	MANE_select
ENST00000641042.1	ENA ID EGAS00001001486
ENST00000641042.1	MANE_select
ENST00000641432.1	ENA ID EGAS00001001486
ENST00000641235.1	ENA ID EGAS00001001486
ENST00000641460.1	NCBI GEO ID GSE80249
ENST00000641460.1	alternative 5' UTR
ENST00000641535.1	ENA ID EGAS00001001486
ENST00000641535.1	MANE_select
ENST00000641535.1	alternative 5' UTR
ENST00000641971.1	ENA ID EGAS00001001486
ENST00000641971.1	NAGNAG splice site
ENST00000641971.1	alternative 5' UTR
ENST00000641067.1	ENA ID EGAS00001001486
ENST00000641622.1	ENA ID EGAS00001001486
ENST00000641622.1	MANE_select
ENST00000641282.1	ENA ID EGAS00001001486
ENST00000641282.1	alternative 5' UTR
ENST00000641540.1	ENA ID EGAS00001001486
ENST00000641540.1	NCBI GEO ID GSE80249
ENST00000623167.1	LOF variant in other haplotypes
ENST00000623167.1	MANE_select
ENST00000641002.1	ENA ID EGAS00001001486
ENST00000641002.1	MANE_select
ENST00000643759.2	CAGE supported TSS
ENST00000643759.2	LR annotation
ENST00000643759.2	MANE_select
ENST00000368145.2	ENA ID EGAS00001001486
ENST00000368145.2	MANE_select
ENST00000368145.2	NCBI GEO ID GSE80249
ENST00000641189.1	ENA ID EGAS00001001486
ENST00000641846.1	ENA ID EGAS00001001486
ENST00000641846.1	MANE_select
ENST00000641131.1	ENA ID EGAS00001001486
ENST00000491210.1	putative novel transcript
ENST00000368141.5	MANE_select
ENST00000368140.6	MANE_select
ENST00000368140.6	alpha 1 isoform
ENST00000368138.7	alpha 2 isoform
ENST00000392254.6	beta 1 isoform
ENST00000392252.7	beta 2 isoform
ENST00000566111.5	alternative 5' UTR
ENST00000426592.6	alternative 5' UTR
ENST00000447473.6	alternative 5' UTR
ENST00000295809.12	MANE_select
ENST00000448393.6	confirm experimentally
ENST00000567661.5	alternative 5' UTR
ENST00000368130.9	MANE_select
ENST00000411768.1	QC splicing correct
ENST00000368125.9	MANE_select
ENST00000609696.1	nested 454 RNA-Seq supported
ENST00000368122.4	CAGE supported TSS
ENST00000368122.4	LR annotation
ENST00000368122.4	MANE_select
ENST00000368122.4	QC splicing correct
ENST00000642080.1	ENA ID EGAS00001001486
ENST00000642080.1	alternative 5' UTR
ENST00000423932.6	MANE_select
ENST00000423932.6	upstream ATG
ENST00000334857.3	MANE_select
ENST00000255040.3	MANE_select
ENST00000255030.9	MANE_select
ENST00000368109.5	FLJ20442
ENST00000368108.7	alternative 5' UTR
ENST00000368107.2	MANE_select
ENST00000368107.2	alternative 5' UTR
ENST00000368106.4	MANE_select
ENST00000289707.10	FLJ90188
ENST00000289707.10	MANE_select
ENST00000675823.1	CAGE supported TSS
ENST00000675556.1	CAGE supported TSS
ENST00000676197.1	CAGE supported TSS
ENST00000674833.1	CAGE supported TSS
ENST00000674800.1	CAGE supported TSS
ENST00000674949.1	CAGE supported TSS
ENST00000675192.1	CAGE supported TSS
ENST00000675704.1	CAGE supported TSS
ENST00000674760.1	CAGE supported TSS
ENST00000674603.1	CAGE supported TSS
ENST00000676072.1	CAGE supported TSS
ENST00000676285.1	CAGE supported TSS
ENST00000675457.1	CAGE supported TSS
ENST00000491974.2	CAGE supported TSS
ENST00000675103.1	CAGE supported TSS
ENST00000675766.1	CAGE supported TSS
ENST00000674808.1	CAGE supported TSS
ENST00000644477.2	CAGE supported TSS
ENST00000675716.1	CAGE supported TSS
ENST00000676249.1	CAGE supported TSS
ENST00000675503.1	CAGE supported TSS
ENST00000674714.1	CAGE supported TSS
ENST00000674922.1	CAGE supported TSS
ENST00000621242.2	CAGE supported TSS
ENST00000674683.1	CAGE supported TSS
ENST00000675285.1	CAGE supported TSS
ENST00000368100.1	MANE_select
ENST00000608430.2	CAGE supported TSS
ENST00000476696.5	novel transcript
ENST00000368099.9	MANE_select
ENST00000475911.2	novel transcript
ENST00000479940.2	novel transcript
ENST00000657346.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000368097.9	KIAA0120
ENST00000368097.9	MANE_select
ENST00000320307.8	alternative 5' UTR
ENST00000397334.2	alternative 5' UTR
ENST00000493195.5	FLJ32088
ENST00000476102.1	QC splicing correct
ENST00000368094.6	KIAA1355
ENST00000368094.6	MANE_select
ENST00000368093.4	MANE_select
ENST00000657602.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423943.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000640914.1	alternative 3' UTR
ENST00000644903.1	CAGE supported TSS
ENST00000644903.1	LR annotation
ENST00000644903.1	MANE_select
ENST00000638728.1	alternative 5' UTR
ENST00000638868.1	alternative 5' UTR
ENST00000368090.5	FLJ90174
ENST00000368090.5	MANE_select
ENST00000435580.2	Assembled from SLRseq reads (SRP049776)
ENST00000662080.1	Assembled from SLRseq reads (SRP049776)
ENST00000368088.4	MANE_select
ENST00000314485.12	MANE_select
ENST00000361216.8	MANE_select
ENST00000392233.7	QC splicing correct
ENST00000368081.9	MANE_select
ENST00000368078.8	MANE_select
ENST00000418602.1	FLJ35980
ENST00000360472.9	MANE_select
ENST00000368076.1	FLJ38560
ENST00000326837.6	alternative 5' UTR
ENST00000368074.6	MANE_select
ENST00000368074.6	alternative 5' UTR
ENST00000473382.2	alternative 3' UTR
ENST00000461888.5	QC splicing correct
ENST00000440682.5	alternative 5' UTR
ENST00000407642.6	alternative 5' UTR
ENST00000419626.1	alternative 5' UTR
ENST00000647676.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000656013.1	Assembled from SLRseq reads (SRP049776)
ENST00000368072.10	MANE_select
ENST00000241704.8	CAGE supported TSS
ENST00000241704.8	LR annotation
ENST00000241704.8	MANE_select
ENST00000368069.7	FLJ26320
ENST00000648632.1	NMD likely if extended
ENST00000294785.10	KIAA0253
ENST00000294785.10	MANE_select
ENST00000302101.6	MANE_select
ENST00000368061.3	KIAA1215, DKFZp434L1020
ENST00000368061.3	MANE_select
ENST00000368057.8	MANE_select
ENST00000368054.8	MANE_select
ENST00000628340.1	NAGNAG splice site
ENST00000368046.8	MANE_select
ENST00000368043.8	MANE_select
ENST00000368037.9	QC splicing correct
ENST00000392203.8	QC splicing correct
ENST00000263285.11	MANE_select
ENST00000263285.11	QC splicing correct
ENST00000368034.9	MANE_select
ENST00000326245.4	MANE_select
ENST00000368029.4	MANE_select
ENST00000368026.11	MANE_select
ENST00000423014.3	MANE_select
ENST00000368020.5	alternative 5' UTR
ENST00000368021.7	MANE_select
ENST00000368019.5	QC splicing correct
ENST00000531842.1	QC splicing correct
ENST00000368013.8	MANE_select
ENST00000368016.7	QC splicing correct
ENST00000368015.1	QC splicing correct
ENST00000368012.4	MANE_select
ENST00000368011.9	MANE_select
ENST00000368010.4	MANE_select
ENST00000368009.7	MANE_select
ENST00000368006.8	MANE_select
ENST00000464113.1	alternative 5' UTR
ENST00000496632.1	QC splicing correct
ENST00000496632.1	non canonical TEC
ENST00000467540.5	novel transcript
ENST00000368003.6	MANE_select
ENST00000482672.1	novel transcript
ENST00000473766.5	novel transcript
ENST00000492950.5	alternative 5' UTR
ENST00000289865.12	QC splicing correct
ENST00000289865.12	non canonical U12
ENST00000368002.8	MANE_select
ENST00000368002.8	genebuild_only_MANE
ENST00000479344.1	alternative 5' UTR
ENST00000368001.1	QC splicing correct
ENST00000368001.1	non canonical U12
ENST00000487163.5	QC splicing correct
ENST00000487163.5	non canonical U12
ENST00000493054.5	QC splicing correct
ENST00000493054.5	non canonical U12
ENST00000652729.1	alternative 5' UTR
ENST00000367999.9	CAGE supported TSS
ENST00000367999.9	LR annotation
ENST00000367999.9	MANE_select
ENST00000367999.9	alternative 5' UTR
ENST00000495483.5	FLJ37536
ENST00000319769.10	MANE_select
ENST00000367998.5	alternative 5' UTR
ENST00000367998.5	alternatively spliced 5' UTR, shares CDS with RP11-297K8.5-001
ENST00000367996.6	MANE_select
ENST00000677550.1	alternative 5' UTR
ENST00000678793.1	NAGNAG splice site
ENST00000677138.1	NAGNAG splice site
ENST00000677457.1	alternative 3' UTR
ENST00000678605.1	alternative 3' UTR
ENST00000676972.1	MANE_select
ENST00000676972.1	alternative 5' UTR
ENST00000289902.2	MANE_select
ENST00000367990.7	MANE_select
ENST00000470459.6	QC splicing correct
ENST00000470459.6	non canonical TEC
ENST00000463273.5	alternative 5' UTR
ENST00000469730.2	QC splicing correct
ENST00000469730.2	alternative 5' UTR
ENST00000474486.5	novel transcript
ENST00000367988.8	FLJ12770
ENST00000367988.8	MANE_select
ENST00000470426.5	novel transcript
ENST00000465512.5	novel transcript
ENST00000492482.5	novel transcript
ENST00000367987.1	FLJ12770
ENST00000367987.1	alternative 5' UTR
ENST00000468803.1	novel transcript
ENST00000475793.1	novel transcript
ENST00000512372.5	NP_001070943.1
ENST00000367983.9	MANE_select
ENST00000437437.6	NP_001070945.1
ENST00000412844.6	NP_001070941.1
ENST00000428574.6	NP_001070937.1
ENST00000442691.6	NP_001070946.1
ENST00000505005.5	NP_001070942.1
ENST00000508740.5	NP_001070944.1
ENST00000367981.7	NP_001070940.1
ENST00000511676.5	NP_001070947.1
ENST00000511748.5	alternative 3' UTR
ENST00000367984.8	NP_001070939.1
ENST00000367985.7	NP_001070949.1
ENST00000367979.6	NP_001070950.1
ENST00000504449.2	MANE_select
ENST00000533357.5	MANE_select
ENST00000672287.2	CAGE supported TSS
ENST00000526189.3	upstream ATG
ENST00000342751.8	NP_001030588.1
ENST00000367975.7	MANE_select
ENST00000432287.6	NP_001030589.1
ENST00000392169.6	NP_001030590.1
ENST00000367974.2	MANE_select
ENST00000667751.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000271450.12	MANE_select
ENST00000467525.5	QC splicing correct
ENST00000459885.1	QC splicing correct
ENST00000309758.6	MANE_select
ENST00000443193.6	MANE_select
ENST00000443193.6	upstream ATG
ENST00000436743.6	alternative 5' UTR
ENST00000426740.7	NAGNAG splice site
ENST00000426740.7	upstream ATG
ENST00000442336.1	NAGNAG splice site
ENST00000442336.1	alternative 5' UTR
ENST00000502411.5	QC splicing correct
ENST00000467903.5	QC splicing correct
ENST00000467903.5	non canonical TEC
ENST00000650385.1	LR annotation
ENST00000650385.1	MANE_select
ENST00000367957.7	upstream ATG
ENST00000236938.12	MANE_select
ENST00000236938.12	upstream ATG
ENST00000465403.1	novel transcript
ENST00000470841.1	novel transcript
ENST00000495397.1	FLJ31052
ENST00000484291.5	QC splicing correct
ENST00000367943.5	MANE_select
ENST00000680688.1	align_id:3529286|asmbl_19451
ENST00000679853.1	NAGNAG splice site
ENST00000679853.1	align_id:3529282|asmbl_19447
ENST00000681779.1	align_id:3529287|asmbl_19452
ENST00000681801.1	align_id:3529284|asmbl_19449
ENST00000681738.1	align_id:3529285|asmbl_19450
ENST00000681492.1	align_id:3529290|asmbl_19455
ENST00000679886.1	align_id:3529283|asmbl_19448
ENST00000681169.1	align_id:3529288|asmbl_19453
ENST00000681001.1	align_id:3529280|asmbl_19445
ENST00000367942.4	MANE_select
ENST00000680462.1	align_id:3529293|asmbl_19458
ENST00000681187.1	align_id:1286339|asmbl_6242
ENST00000680180.1	align_id:3529294|asmbl_19459
ENST00000680481.1	align_id:3529298|asmbl_19463
ENST00000681912.1	align_id:3529281|asmbl_19446
ENST00000681557.1	align_id:3529279|asmbl_19444
ENST00000681541.1	align_id:3529278|asmbl_19443
ENST00000476437.1	novel transcript
ENST00000458136.1	Em:BC018064.1 is a best in genome match to  this pseudogene, therefore classify it as expressed
ENST00000294794.8	DKFZP586L151
ENST00000294794.8	MANE_select
ENST00000361897.10	MANE_select
ENST00000493151.1	NP_001119532
ENST00000648032.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000671049.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420220.1	alternative 5' UTR
ENST00000367935.10	MANE_select
ENST00000493255.1	QC splicing correct
ENST00000458626.4	MANE_select
ENST00000367929.3	MANE_select
ENST00000493550.1	novel transcript
ENST00000489294.2	MANE_select
ENST00000282169.8	novel transcript
ENST00000476240.1	novel transcript
ENST00000446985.6	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000671979.1	alternative 5' UTR
ENST00000415555.5	alternative 5' UTR
ENST00000673239.1	upstream ATG
ENST00000367921.8	LR annotation
ENST00000367921.8	MANE_select
ENST00000367921.8	alternative 5' UTR
ENST00000485405.5	novel transcript
ENST00000463037.5	novel transcript
ENST00000649629.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000484251.1	novel transcript
ENST00000470195.2	QC splicing correct
ENST00000470195.2	non canonical TEC
ENST00000470195.2	not best-in-genome evidence
ENST00000367912.6	non canonical TEC
ENST00000527809.5	alternative 5' UTR
ENST00000367909.11	MANE_select
ENST00000491263.1	novel transcript
ENST00000528938.1	alternative 5' UTR
ENST00000313961.10	MANE_select
ENST00000415437.1	FLJ34821
ENST00000528019.5	non-canonical splicing between exons 2 and 3
ENST00000534289.5	alternative 5' UTR
ENST00000450453.6	alternative 5' UTR
ENST00000442820.5	alternative 5' UTR
ENST00000367900.7	alternative 5' UTR
ENST00000271452.8	FLJ36029
ENST00000271452.8	MANE_select
ENST00000420696.7	MANE_select
ENST00000340699.7	alternative 5' UTR
ENST00000627490.2	NP_001191892.1
ENST00000559240.5	QC splicing correct
ENST00000468104.5	QC splicing correct
ENST00000560641.5	alternative 5' UTR
ENST00000482110.5	alternative 5' UTR
ENST00000558796.2	QC splicing correct
ENST00000558796.2	non canonical TEC
ENST00000558837.5	alternative 5' UTR
ENST00000559560.1	alternative 5' UTR
ENST00000342310.7	MANE_select
ENST00000294816.6	alternative 5' UTR
ENST00000367893.4	alternative 5' UTR
ENST00000668780.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000359842.10	MANE_select
ENST00000656941.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658987.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665666.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000421273.5	non canonical TEC
ENST00000666433.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000438275.5	non canonical TEC
ENST00000294818.2	FLJ25811
ENST00000294818.2	MANE_select
ENST00000669787.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654631.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659914.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000367889.8	MANE_select
ENST00000367885.5	QC splicing correct
ENST00000367885.5	non canonical polymorphism
ENST00000367884.6	alternative 5' UTR
ENST00000367884.6	non canonical TEC
ENST00000367883.3	QC splicing correct
ENST00000367883.3	non canonical polymorphism
ENST00000461759.1	QC splicing correct
ENST00000367881.11	CAGE supported TSS
ENST00000367881.11	MANE_select
ENST00000367881.11	upstream ATG
ENST00000464650.5	alternative 5' UTR
ENST00000481278.5	t
ENST00000423121.1	FLJ42974
ENST00000367879.9	MANE_select
ENST00000469256.6	CAGE supported TSS
ENST00000463772.5	QC splicing correct
ENST00000475333.2	CAGE supported TSS
ENST00000626270.2	Assembled from SLRseq reads (SRP049776)
ENST00000435676.2	alternative 3' UTR
ENST00000456900.1	alternative 3' UTR
ENST00000441649.1	QC splicing correct
ENST00000441649.1	alternative 3' UTR
ENST00000354422.4	MANE_select
ENST00000653824.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425271.1	QC splicing correct
ENST00000662326.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000426519.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000488458.1	non-canonical splice acceptor site between exons 6 and 7 and non-canonical splice donor site between exons 7 and 8
ENST00000449930.5	alternative 5' UTR
ENST00000367876.9	KIAA1513, FLJ23426
ENST00000367876.9	MANE_select
ENST00000367875.1	QC splicing correct
ENST00000367875.1	alternative 5' UTR
ENST00000367874.5	MANE_select
ENST00000271417.8	MANE_select
ENST00000528703.5	QC splicing correct
ENST00000525740.5	QC splicing correct
ENST00000529387.5	QC splicing correct
ENST00000529071.5	QC splicing correct
ENST00000526687.1	QC splicing correct
ENST00000367872.9	FLJ14904, FLJ29032, DKFZp434L0217
ENST00000367872.9	MANE_select
ENST00000491055.5	novel transcript
ENST00000487826.1	putative novel transcript
ENST00000367868.4	MANE_select
ENST00000361200.7	FLJ37495
ENST00000361200.7	MANE_select
ENST00000485151.1	novel transcript
ENST00000457941.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000367866.7	MANE_select
ENST00000648671.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000420254.7	QC splicing correct
ENST00000483825.5	FLJ46519
ENST00000362089.10	MANE_select
ENST00000660512.1	Assembled from SLRseq reads (SRP049776)
ENST00000417969.1	QC splicing correct
ENST00000466652.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000370509.5	MANE_select
ENST00000451992.2	QC splicing correct
ENST00000367854.8	FLJ21772, DKFZp667N096
ENST00000367854.8	MANE_select
ENST00000475127.5	novel transcript
ENST00000472038.1	novel transcript FLJ27288
ENST00000461790.1	novel transcript
ENST00000359523.7	MANE_select
ENST00000403379.3	not organism-supported
ENST00000367851.9	MANE_select
ENST00000485964.5	QC splicing correct
ENST00000485964.5	non canonical TEC
ENST00000271373.9	MANE_select
ENST00000271373.9	alternative 5' UTR
ENST00000367846.8	DKFZP564B167
ENST00000458574.1	alternative 5' UTR
ENST00000491067.1	novel transcript
ENST00000460432.1	novel transcript
ENST00000367835.1	alternative 5' UTR
ENST00000485232.1	novel transcript
ENST00000367833.7	MANE_select
ENST00000367833.7	MGC3794
ENST00000471981.1	novel transcript
ENST00000271375.7	MANE_select
ENST00000367821.8	MANE_select
ENST00000465440.1	novel transcript
ENST00000650143.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000655809.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660568.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655897.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000422548.1	novel transcript
ENST00000367819.3	MANE_select
ENST00000367818.4	MANE_select
ENST00000367817.4	DKFZp586D2322
ENST00000367817.4	MANE_select
ENST00000650631.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000663134.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669234.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667346.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670921.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665467.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661054.1	Assembled from SLRseq reads (SRP049776)
ENST00000660116.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000367816.5	alternative 5' UTR
ENST00000367815.9	MANE_select
ENST00000494797.1	CAGE supported TSS
ENST00000367811.8	MANE_select
ENST00000472647.5	FLJ37194
ENST00000472647.5	NP_932076.1
ENST00000528517.5	QC splicing correct
ENST00000329281.6	alternative 3' UTR
ENST00000420531.1	alternative 5' UTR
ENST00000367808.8	MANE_select
ENST00000426663.1	alternative 5' UTR
ENST00000367806.7	FLJ25846
ENST00000367805.7	NAGNAG splice site
ENST00000545005.5	alternative 5' UTR
ENST00000491570.2	novel transcript
ENST00000456107.1	alternative 5' UTR
ENST00000236137.10	LR annotation
ENST00000236137.10	MANE_select
ENST00000392097.5	confirm experimentally
ENST00000367797.9	MANE_select
ENST00000367796.3	QC splicing correct
ENST00000263686.11	MANE_select
ENST00000367786.6	QC splicing correct
ENST00000458599.6	QC splicing correct
ENST00000367788.6	QC splicing correct
ENST00000367795.2	QC splicing correct
ENST00000498289.5	FLJ45155
ENST00000472795.5	novel transcript
ENST00000359326.9	MANE_select
ENST00000359326.9	alternative 5' UTR
ENST00000496973.5	novel transcript
ENST00000481744.5	novel transcript
ENST00000466580.6	non canonical U12
ENST00000459772.5	FLJ10706
ENST00000236147.6	MANE_select
ENST00000236147.6	upstream ATG
ENST00000333360.12	MANE_select
ENST00000367775.5	QC splicing correct
ENST00000367777.5	QC splicing correct
ENST00000367776.5	QC splicing correct
ENST00000367774.1	QC splicing correct
ENST00000609271.1	alternative 5' UTR
ENST00000310392.5	MANE_select
ENST00000310392.5	MGC9084
ENST00000367771.11	MANE_select
ENST00000470238.1	novel transcript
ENST00000361580.7	MANE_select
ENST00000439373.3	MANE_select
ENST00000367764.3	not organism-supported
ENST00000661719.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666308.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671647.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669113.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654909.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669112.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669101.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654877.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660112.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657208.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661826.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657163.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440404.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000416416.1	putative novel transcript
ENST00000446102.1	putative novel transcript
ENST00000654034.1	Assembled from SLRseq reads (SRP049776)
ENST00000367763.8	CAGE supported TSS
ENST00000367763.8	MANE_select
ENST00000367763.8	upstream ATG
ENST00000239461.11	MANE_select
ENST00000669750.1	Assembled from SLRseq reads (SRP049776)
ENST00000670085.1	Assembled from SLRseq reads (SRP049776)
ENST00000664920.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000653116.1	Assembled from SLRseq reads (SRP049776)
ENST00000455124.2	Genoscope mRNA only
ENST00000455124.2	QC splicing correct
ENST00000367758.7	FLJ23550
ENST00000367755.9	MANE_select
ENST00000479749.1	QC splicing correct
ENST00000479749.1	non canonical TEC
ENST00000236166.4	confirm experimentally
ENST00000462643.2	NMD likely if extended
ENST00000489354.3	NMD likely if extended
ENST00000209929.10	MANE_select
ENST00000483192.2	alternative 5' UTR
ENST00000617670.6	MANE_select
ENST00000617670.6	alternative 5' UTR
ENST00000354841.4	alternative 5' UTR
ENST00000459868.1	NMD likely if extended
ENST00000367749.4	MANE_select
ENST00000497228.5	QC splicing correct
ENST00000599419.1	expressed pseudogene (M55632.1)
ENST00000367742.7	FLJ12430
ENST00000467601.1	novel transcript
ENST00000480806.1	QC splicing correct
ENST00000495585.1	DKFZp434M1616
ENST00000037502.11	MANE_select
ENST00000236192.12	MANE_select
ENST00000361735.4	FLJ26050, FLJ10310, FLJ14646, FLJ14980
ENST00000361735.4	KIAA0859
ENST00000361735.4	MANE_select
ENST00000485629.1	novel transcript
ENST00000627582.3	MANE_select
ENST00000367731.5	DKFZp566K013, KIAA0820
ENST00000661895.1	Assembled from SLRseq reads (SRP049776)
ENST00000489002.5	novel transcript
ENST00000465374.1	novel transcript
ENST00000475059.5	novel transcript
ENST00000484368.1	novel transcript
ENST00000344529.5	MANE_select
ENST00000367728.1	alternative 5' UTR
ENST00000367727.9	LOC92346
ENST00000367727.9	MANE_select
ENST00000263688.4	MANE_select
ENST00000367721.3	MANE_select
ENST00000432694.2	QC splicing correct
ENST00000404377.4	NP_005083
ENST00000404377.4	upstream ATG
ENST00000281834.4	MANE_select
ENST00000488053.1	novel transcript
ENST00000661092.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660739.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661267.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669220.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000437190.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654650.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000659863.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654140.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000340385.6	MANE_select
ENST00000367714.4	MANE_select
ENST00000367714.4	MGC43026
ENST00000466087.1	novel transcript
ENST00000648789.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000479367.1	novel transcript
ENST00000476568.1	novel transcript
ENST00000648193.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000333279.3	FLJ45235
ENST00000333279.3	MANE_select
ENST00000417563.3	MANE_select
ENST00000209884.5	MANE_select
ENST00000496683.5	novel transcript (FLJ31044)
ENST00000460816.5	novel transcript
ENST00000484920.5	novel transcript
ENST00000479159.1	novel transcript
ENST00000493233.1	novel transcript
ENST00000495275.1	novel transcript
ENST00000649689.2	CAGE supported TSS
ENST00000649689.2	LR annotation
ENST00000649689.2	MANE_select
ENST00000367704.5	FLJ32748
ENST00000367698.4	CAGE supported TSS
ENST00000367698.4	MANE_select
ENST00000487183.1	non canonical TEC
ENST00000367696.7	KIAA2025
ENST00000367696.7	MANE_select
ENST00000367694.2	FLJ16661
ENST00000421851.1	QC splicing correct
ENST00000665650.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665650.1	Assembled from SLRseq reads (SRP049776)
ENST00000659243.1	Assembled from SLRseq reads (SRP049776)
ENST00000426899.6	Assembled from SLRseq reads (SRP049776)
ENST00000454467.5	QC splicing correct
ENST00000656058.1	Assembled from SLRseq reads (SRP049776)
ENST00000367690.5	CAGE supported TSS
ENST00000469553.6	novel transcript
ENST00000486220.5	alternative 5' UTR
ENST00000485114.1	novel transcript
ENST00000461613.1	novel transcript
ENST00000367685.5	MANE_select
ENST00000448686.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670650.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000426793.1	alternative 5' UTR
ENST00000367679.7	MANE_select
ENST00000405362.1	alternative 5' UTR
ENST00000476371.1	MANE_select
ENST00000239462.9	MANE_select
ENST00000423313.6	MANE_select
ENST00000444639.5	alternative 5' UTR
ENST00000545251.6	alternative 5' UTR
ENST00000367674.7	MANE_select
ENST00000422274.2	QC splicing correct
ENST00000426575.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000461830.6	non canonical TEC
ENST00000367669.8	MANE_select
ENST00000367666.5	FLJ10416
ENST00000649803.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000426030.2	QC splicing correct
ENST00000456125.1	QC splicing correct
ENST00000654248.1	Assembled from SLRseq reads (SRP049776)
ENST00000660913.1	Assembled from SLRseq reads (SRP049776)
ENST00000367662.5	MANE_select
ENST00000662545.1	Assembled from SLRseq reads (SRP049776)
ENST00000361833.7	MANE_select
ENST00000361833.7	Sw:O14525.3
ENST00000424564.2	NP_996991.1
ENST00000361539.5	KIAA1747
ENST00000361539.5	LOC57795
ENST00000361539.5	MANE_select
ENST00000659805.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000451341.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666721.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663166.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670676.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670762.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663978.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654501.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670728.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660865.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438575.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671550.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664407.1	Assembled from SLRseq reads (SRP049776)
ENST00000670039.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000458070.1	QC splicing correct
ENST00000654430.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670282.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000495165.5	FLJ23871
ENST00000464631.6	QC splicing correct
ENST00000354921.7	QC splicing correct
ENST00000476232.6	QC splicing correct
ENST00000481349.1	novel transcript
ENST00000654141.1	Assembled from SLRseq reads (SRP049776)
ENST00000367649.8	MANE_select
ENST00000367649.8	NP_733793.2
ENST00000465723.1	novel transcript
ENST00000462775.5	isoform 1
ENST00000646925.1	CAGE supported TSS
ENST00000647674.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000319416.7	DKFZp564J047
ENST00000319416.7	MANE_select
ENST00000367642.3	not organism-supported
ENST00000419909.6	QC splicing correct
ENST00000608517.1	CAGE supported TSS
ENST00000324778.5	not organism-supported
ENST00000234816.7	MANE_select
ENST00000263733.5	MANE_select
ENST00000367627.8	MANE_select
ENST00000472001.1	novel transcript
ENST00000502732.6	MANE_select
ENST00000668691.1	NP_001129473.1
ENST00000367619.8	MANE_select
ENST00000509175.5	alternative 5' UTR
ENST00000507383.5	alternative 5' UTR
ENST00000508229.5	alternative 5' UTR
ENST00000367618.8	MANE_select
ENST00000508285.2	alternative 5' UTR
ENST00000484883.1	FLJ25438
ENST00000489080.1	FLJ36141
ENST00000569644.1	FLJ44088
ENST00000367615.9	MANE_select
ENST00000367614.5	FLJ44941
ENST00000444136.6	MANE_select
ENST00000444136.6	genebuild_only_MANE
ENST00000294848.12	FLJ45446
ENST00000669730.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000609928.6	MANE_select
ENST00000609928.6	alternative 5' UTR
ENST00000495650.1	alternative 5' UTR
ENST00000474318.1	QC splicing correct
ENST00000474318.1	non canonical TEC
ENST00000483123.1	FLJ33061
ENST00000528443.6	NAGNAG splice site
ENST00000606911.7	MANE_select
ENST00000435319.8	CAGE supported TSS
ENST00000531630.6	QC splicing correct
ENST00000367607.8	KIAA0480
ENST00000367607.8	MANE_select
ENST00000429851.5	KIAA0480
ENST00000417046.1	FLJ12751
ENST00000367602.8	MANE_select
ENST00000263726.4	MANE_select
ENST00000367595.4	MANE_select
ENST00000662859.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648175.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000442621.1	LOC148756
ENST00000668742.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660699.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000367590.9	MANE_select
ENST00000367588.9	KIAA1614
ENST00000367588.9	MANE_select
ENST00000496210.1	novel transcript
ENST00000367587.1	CAGE supported TSS
ENST00000367587.1	FLJ33349
ENST00000461346.1	novel transcript
ENST00000415647.1	FLJ22706
ENST00000258301.6	MANE_select
ENST00000367580.6	MANE_select
ENST00000367577.7	MANE_select
ENST00000435023.1	LOC284646
ENST00000524607.6	CAGE supported TSS
ENST00000524607.6	alternative 5' UTR
ENST00000524607.6	non canonical U12
ENST00000533229.1	non canonical U12
ENST00000367573.7	MANE_select
ENST00000367573.7	non canonical U12
ENST00000367570.5	QC splicing correct
ENST00000367570.5	non canonical U12
ENST00000621791.4	QC splicing correct
ENST00000621791.4	non canonical U12
ENST00000360108.7	non canonical U12
ENST00000661326.1	Assembled from SLRseq reads (SRP049776)
ENST00000671017.1	Assembled from SLRseq reads (SRP049776)
ENST00000339948.3	MANE_select
ENST00000663078.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000653755.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000449842.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608183.1	QC splicing correct
ENST00000608183.1	non canonical TEC
ENST00000658912.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649049.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000331872.11	MANE_select
ENST00000642379.1	CAGE supported TSS
ENST00000463851.6	Genoscope mRNA only
ENST00000463851.6	QC splicing correct
ENST00000463851.6	non canonical TEC
ENST00000367565.2	MANE_select
ENST00000634723.1	alternative 5' UTR
ENST00000634626.1	alternative 5' UTR
ENST00000426890.5	NMD likely if extended
ENST00000367561.9	DKFZp434E169
ENST00000294854.13	MANE_select
ENST00000294854.13	NMD exception
ENST00000648414.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000436031.6	FLJ46275
ENST00000456971.3	QC splicing correct
ENST00000367559.7	MANE_select
ENST00000367558.6	MANE_select
ENST00000258302.8	QC splicing correct
ENST00000483095.6	CAGE supported TSS
ENST00000483095.6	alternative 5' UTR
ENST00000367557.8	alternative 5' UTR
ENST00000508450.5	CAGE supported TSS
ENST00000508450.5	alternative 5' UTR
ENST00000515211.1	CAGE supported TSS
ENST00000661321.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000367549.4	MANE_select
ENST00000485081.5	FLJ39263
ENST00000367547.8	MANE_select
ENST00000497549.2	QC splicing correct
ENST00000258341.5	MANE_select
ENST00000457852.3	QC splicing correct
ENST00000493293.5	Sw:Q13753.2
ENST00000264144.5	MANE_select
ENST00000287713.7	MANE_select
ENST00000661878.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656270.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663067.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000507691.6	alternative 5' UTR
ENST00000419169.5	alternative 5' UTR
ENST00000502375.1	alternative 5' UTR
ENST00000367535.8	MANE_select
ENST00000665299.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000359856.11	MANE_select
ENST00000304685.8	QC splicing correct
ENST00000360851.4	MANE_select
ENST00000308641.6	MANE_select
ENST00000481562.1	novel transcript
ENST00000486375.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000361927.9	MANE_select
ENST00000361641.6	NP_001287693.1
ENST00000361641.6	align_id:3531034|asmbl_21199
ENST00000643231.1	align_id:3531036|asmbl_21201
ENST00000533373.6	NP_001287695.1
ENST00000533373.6	align_id:3531032|asmbl_21197
ENST00000647437.1	align_id:3531033|asmbl_21198
ENST00000367518.4	align_id:3531040|asmbl_21205
ENST00000644145.1	align_id:3531031|asmbl_21196
ENST00000645668.2	MANE_select
ENST00000646297.2	align_id:3531037|asmbl_21202
ENST00000644592.1	align_id:3531041|asmbl_21206
ENST00000644479.1	align_id:3531038|asmbl_21203
ENST00000644479.1	alternative 3' UTR
ENST00000643702.1	align_id:3531035|asmbl_21200
ENST00000644815.1	align_id:3531039|asmbl_21204
ENST00000664793.1	Assembled from SLRseq reads (SRP049776)
ENST00000235307.7	MANE_select
ENST00000648109.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000675405.1	CAGE supported TSS
ENST00000489143.6	QC splicing correct
ENST00000660403.1	Assembled from SLRseq reads (SRP049776)
ENST00000657103.1	Assembled from SLRseq reads (SRP049776)
ENST00000648800.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000653410.1	Assembled from SLRseq reads (SRP049776)
ENST00000658878.1	Assembled from SLRseq reads (SRP049776)
ENST00000318130.13	MANE_select
ENST00000367511.4	MANE_select
ENST00000566476.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000367509.8	FLJ34255
ENST00000367510.8	MANE_select
ENST00000367506.10	MANE_select
ENST00000367500.9	MANE_select
ENST00000367498.8	MANE_select
ENST00000475046.5	FLJ35593
ENST00000609881.1	CAGE supported TSS
ENST00000562817.2	QC splicing correct
ENST00000667194.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000655976.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439633.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608417.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669266.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665770.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670075.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000609066.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667796.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655092.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665129.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657435.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665999.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667960.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654367.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655693.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670065.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654596.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666202.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669189.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662341.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658071.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665571.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000271588.9	MANE_select
ENST00000493413.1	novel transcript
ENST00000475585.1	novel transcript
ENST00000659717.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445192.7	MANE_select
ENST00000367478.9	MANE_select
ENST00000419367.8	non canonical conserved
ENST00000287859.11	MANE_select
ENST00000287859.11	non canonical conserved
ENST00000367470.8	non canonical conserved
ENST00000478571.1	non canonical conserved
ENST00000461662.1	novel transcript
ENST00000665030.1	Assembled from SLRseq reads (SRP049776)
ENST00000660380.1	Assembled from SLRseq reads (SRP049776)
ENST00000657692.1	Assembled from SLRseq reads (SRP049776)
ENST00000662990.1	Assembled from SLRseq reads (SRP049776)
ENST00000660991.1	Assembled from SLRseq reads (SRP049776)
ENST00000655945.1	Assembled from SLRseq reads (SRP049776)
ENST00000391997.3	MANE_select
ENST00000497198.1	NP_072098.1
ENST00000669256.1	Assembled from SLRseq reads (SRP049776)
ENST00000367468.10	MANE_select
ENST00000608917.2	CAGE supported TSS
ENST00000367466.4	MANE_select
ENST00000657376.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670356.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667049.1	Assembled from SLRseq reads (SRP049776)
ENST00000667298.1	Assembled from SLRseq reads (SRP049776)
ENST00000429725.1	LOC339476
ENST00000664099.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662036.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659970.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000648838.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648838.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000432976.2	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000659945.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658951.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650519.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000658142.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668705.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000367462.5	FLJ41028
ENST00000367462.5	MANE_select
ENST00000463404.1	novel transcript
ENST00000445957.2	alternative 5' UTR
ENST00000648197.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000434983.2	QC splicing correct
ENST00000664489.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000430776.2	QC splicing correct
ENST00000367460.4	MANE_select
ENST00000655304.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657453.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417209.2	MANE_select
ENST00000642657.1	CAGE supported TSS
ENST00000367459.8	MANE_select
ENST00000391995.7	MANE_select
ENST00000647225.1	CAGE supported TSS
ENST00000235382.7	MANE_select
ENST00000487236.1	QC splicing correct
ENST00000367454.6	FLJ21098
ENST00000367454.6	MANE_select
ENST00000400968.7	MANE_select
ENST00000400968.7	alternative 5' UTR
ENST00000506303.1	alternative 5' UTR
ENST00000367444.7	NP_001035828.1
ENST00000367441.1	alternative 5' UTR
ENST00000367439.8	MANE_select
ENST00000643006.1	MIR1278 host
ENST00000367435.5	CAGE supported TSS
ENST00000367435.5	LR annotation
ENST00000367435.5	MANE_select
ENST00000367434.5	MANE_select
ENST00000668188.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660235.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657700.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660270.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658112.1	Assembled from SLRseq reads (SRP049776)
ENST00000664477.1	Assembled from SLRseq reads (SRP049776)
ENST00000656143.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000655677.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000448412.2	QC splicing correct
ENST00000648938.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000670710.1	Assembled from SLRseq reads (SRP049776)
ENST00000658976.1	Assembled from SLRseq reads (SRP049776)
ENST00000658805.1	Assembled from SLRseq reads (SRP049776)
ENST00000657207.1	Assembled from SLRseq reads (SRP049776)
ENST00000671371.1	Assembled from SLRseq reads (SRP049776)
ENST00000661259.1	Assembled from SLRseq reads (SRP049776)
ENST00000659628.1	Assembled from SLRseq reads (SRP049776)
ENST00000430519.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000294725.14	MANE_select
ENST00000647658.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000610076.1	non canonical TEC
ENST00000466914.2	QC splicing correct
ENST00000367429.9	MANE_select
ENST00000367425.9	MANE_select
ENST00000320493.10	MANE_select
ENST00000367424.4	QC splicing correct
ENST00000367424.4	not best-in-genome evidence
ENST00000608469.6	CAGE supported TSS
ENST00000608469.6	LR annotation
ENST00000608469.6	MANE_select
ENST00000367418.2	non canonical TEC
ENST00000367415.8	LR annotation
ENST00000367415.8	MANE_select
ENST00000256785.5	MANE_select
ENST00000367412.2	LR annotation
ENST00000367412.2	MANE_select
ENST00000490002.1	QC splicing correct
ENST00000490002.1	non canonical polymorphism
ENST00000367409.9	FLJ10517, FLJ10549
ENST00000367409.9	MANE_select
ENST00000367405.5	MANE_select
ENST00000367400.8	MANE_select
ENST00000480086.2	QC splicing correct
ENST00000620048.6	MANE_select
ENST00000367393.8	MANE_select
ENST00000367388.4	CAGE supported TSS
ENST00000367387.6	MANE_select
ENST00000442588.5	alternative 5' UTR
ENST00000538004.5	alternative 5' UTR
ENST00000367385.9	MANE_select
ENST00000544035.5	alternative 5' UTR
ENST00000417895.1	alternative 5' UTR
ENST00000391974.3	alternative 5' UTR
ENST00000660823.1	Assembled from SLRseq reads (SRP049776)
ENST00000367382.6	MANE_select
ENST00000367379.6	alternative 5' UTR
ENST00000530727.5	QC splicing correct
ENST00000442510.8	MANE_select
ENST00000367364.5	NP_001254727.1
ENST00000418674.1	alternative 5' UTR
ENST00000660348.1	Assembled from SLRseq reads (SRP049776)
ENST00000653207.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665868.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661315.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658052.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660854.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000367362.8	MANE_select
ENST00000367355.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669708.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669359.1	Assembled from SLRseq reads (SRP049776)
ENST00000656731.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660351.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659976.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647823.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000654000.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660132.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667211.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671530.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670599.1	Assembled from SLRseq reads (SRP049776)
ENST00000367353.2	MANE_select
ENST00000367350.5	MANE_select
ENST00000447706.6	DKFZp564B1023
ENST00000331314.11	MANE_select
ENST00000433235.1	alternative 5' UTR
ENST00000436897.1	alternative 5' UTR
ENST00000475326.1	novel transcript
ENST00000304244.5	MANE_select
ENST00000532631.5	alternative 5' UTR
ENST00000451872.6	alternative 5' UTR
ENST00000413687.3	MANE_select
ENST00000465162.1	novel transcript
ENST00000461742.7	MANE_select
ENST00000362061.4	MANE_select
ENST00000367338.7	QC splicing correct
ENST00000367330.6	MANE_select
ENST00000367330.6	alternative 5' UTR
ENST00000367333.6	alternative 5' UTR
ENST00000485839.6	alternative 5' UTR
ENST00000435310.5	alternative 5' UTR
ENST00000335211.9	CAGE supported TSS
ENST00000335211.9	MANE_select
ENST00000473483.1	novel transcript DKFZp434B1231
ENST00000367324.8	MANE_select
ENST00000352845.3	confirm experimentally
ENST00000476888.5	QC splicing correct
ENST00000460780.5	QC splicing correct
ENST00000491504.5	QC splicing correct
ENST00000367318.10	CAGE supported TSS
ENST00000367318.10	LR annotation
ENST00000422165.6	CAGE supported TSS
ENST00000422165.6	LR annotation
ENST00000656932.1	LR annotation
ENST00000656932.1	MANE_select
ENST00000367322.6	NAGNAG splice site
ENST00000412633.3	NP_001001431.1
ENST00000509001.5	QC splicing correct
ENST00000509001.5	alternative 5' UTR
ENST00000438742.6	NAGNAG splice site
ENST00000651504.1	QC splicing correct
ENST00000515042.5	QC splicing correct
ENST00000494095.5	DKFZp313E1935
ENST00000503578.5	NMD likely if extended
ENST00000391967.7	MANE_select
ENST00000367313.4	DKFZp686M21196
ENST00000361379.9	MANE_select
ENST00000361379.9	QC splicing correct
ENST00000336092.8	QC splicing correct
ENST00000336092.8	alternative 5' UTR
ENST00000555948.5	QC splicing correct
ENST00000367312.5	QC splicing correct
ENST00000367312.5	alternative 3' UTR
ENST00000555340.6	QC splicing correct
ENST00000556362.1	QC splicing correct
ENST00000556362.1	alternative 5' UTR
ENST00000367311.5	FLJ90698
ENST00000367311.5	MANE_select
ENST00000367311.5	NMD exception
ENST00000367309.1	NMD exception
ENST00000367309.1	alternative 5' UTR
ENST00000340006.7	MANE_select
ENST00000340006.7	genebuild_only_MANE
ENST00000367306.5	QC splicing correct
ENST00000532460.5	alternative 5' UTR
ENST00000526256.5	QC splicing correct
ENST00000533432.5	alternative 5' UTR
ENST00000441932.1	FLJ31028
ENST00000648727.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000367296.8	QC splicing correct
ENST00000490213.5	FLJ31596
ENST00000367295.5	DKFZp781D0314, KIAA1151, FLJ14203
ENST00000430015.5	FLJ12569
ENST00000469130.5	KIAA1213
ENST00000429443.1	FLJ31486
ENST00000361565.9	AT-AC splicing between exons 8 and 9
ENST00000361565.9	FLJ90259, FLJ14626, FLJ10402, DKFZp761M1547, KIAA1192
ENST00000361565.9	MANE_select
ENST00000464117.1	novel transcript
ENST00000362011.7	MANE_select
ENST00000481699.1	novel transcript
ENST00000367288.5	MANE_select
ENST00000367288.5	QC splicing correct
ENST00000367288.5	non canonical TEC
ENST00000367287.5	MANE_select
ENST00000482943.1	FLJ13001
ENST00000295640.9	MANE_select
ENST00000471105.5	DKFZp547H084
ENST00000359651.7	DKFZp686F2495
ENST00000359651.7	alternative 5' UTR
ENST00000367283.7	alternative 5' UTR
ENST00000367284.10	MANE_select
ENST00000367282.6	MANE_select
ENST00000272217.7	FLJ45195
ENST00000272217.7	MANE_select
ENST00000309017.7	NP_002823.3
ENST00000495688.5	CAGE supported TSS
ENST00000462815.5	CAGE supported TSS
ENST00000496197.5	CAGE supported TSS
ENST00000480836.5	CAGE supported TSS
ENST00000477625.5	CAGE supported TSS
ENST00000479092.5	CAGE supported TSS
ENST00000476061.5	CAGE supported TSS
ENST00000467283.5	CAGE supported TSS
ENST00000464870.5	CAGE supported TSS
ENST00000435759.6	CAGE supported TSS
ENST00000486116.5	CAGE supported TSS
ENST00000491584.1	CAGE supported TSS
ENST00000468385.1	CAGE supported TSS
ENST00000367278.8	MANE_select
ENST00000646651.1	CAGE supported TSS
ENST00000646651.1	LR annotation
ENST00000646651.1	MANE_select
ENST00000608999.6	MANE_select
ENST00000367268.5	MANE_select
ENST00000428573.1	QC splicing correct
ENST00000411431.1	QC splicing correct
ENST00000367265.9	MANE_select
ENST00000367265.9	upstream ATG
ENST00000650569.1	NP_001334520.1
ENST00000235790.9	CAGE supported TSS
ENST00000470573.5	QC splicing correct
ENST00000470573.5	non canonical TEC
ENST00000660963.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000367262.4	MANE_select
ENST00000367261.8	MANE_select
ENST00000340990.10	MANE_select
ENST00000367249.9	MANE_select
ENST00000367242.4	MANE_select
ENST00000468449.5	NMD candidate
ENST00000488097.2	QC splicing correct
ENST00000367240.6	QC splicing correct
ENST00000241651.5	MANE_select
ENST00000337894.9	MANE_select
ENST00000337894.9	genebuild_only_MANE
ENST00000665660.1	Assembled from SLRseq reads (SRP049776)
ENST00000434265.2	QC splicing correct
ENST00000255416.9	MANE_select
ENST00000255409.8	MANE_select
ENST00000484834.5	FLJ00314
ENST00000367229.6	MANE_select
ENST00000666545.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657300.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000412772.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662282.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000475157.1	Genoscope mRNA only
ENST00000475157.1	QC splicing correct
ENST00000290551.5	MANE_select
ENST00000354955.5	MANE_select
ENST00000647586.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000493296.1	novel transcript
ENST00000461936.1	novel transcript
ENST00000343110.3	MANE_select
ENST00000367222.7	MANE_select
ENST00000357681.10	MANE_select
ENST00000341360.6	CCDS30977.1
ENST00000466407.1	novel transcript
ENST00000484746.1	QC splicing correct
ENST00000484746.1	non canonical TEC
ENST00000442561.7	MANE_select
ENST00000367210.3	MANE_select
ENST00000367210.3	alternative 5' UTR
ENST00000466470.5	novel transcript
ENST00000432282.5	alternative 5' UTR
ENST00000453771.5	alternative 5' UTR
ENST00000461980.1	novel transcript
ENST00000367214.5	alternative 5' UTR
ENST00000492823.1	novel transcript
ENST00000639812.1	alternative 5' UTR
ENST00000367212.7	alternative 5' UTR
ENST00000640465.1	KIAA0663
ENST00000640465.1	alternative 5' UTR
ENST00000480354.1	novel transcript
ENST00000488411.1	novel transcript
ENST00000550078.2	NMD exception
ENST00000414487.7	MANE_select
ENST00000475035.5	novel transcript
ENST00000470492.5	novel transcript
ENST00000655658.1	Assembled from SLRseq reads (SRP049776)
ENST00000367207.7	FLJ40343
ENST00000656706.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665939.1	Assembled from SLRseq reads (SRP049776)
ENST00000367204.6	MANE_select
ENST00000525442.1	alternative 5' UTR
ENST00000528591.5	alternative 5' UTR
ENST00000565388.1	QC splicing correct
ENST00000367201.7	FLJ10761
ENST00000367202.9	MANE_select
ENST00000367202.9	NP_060678.2
ENST00000477125.1	novel transcript
ENST00000663115.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658822.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654104.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000272190.9	MANE_select
ENST00000367194.5	MANE_select
ENST00000308302.4	FLJ42654
ENST00000308302.4	MANE_select
ENST00000475517.1	novel transcript
ENST00000272203.8	MANE_select
ENST00000485632.1	novel transcript
ENST00000659404.1	Assembled from SLRseq reads (SRP049776)
ENST00000654944.1	Assembled from SLRseq reads (SRP049776)
ENST00000367188.5	MANE_select
ENST00000462752.1	novel transcript
ENST00000479079.1	novel transcript
ENST00000496872.1	novel transcript
ENST00000415899.1	alternative 5' UTR
ENST00000429009.1	alternative 5' UTR
ENST00000463049.5	DKFZp686B01123
ENST00000367182.8	MANE_select
ENST00000367175.1	DKFZp686N2444
ENST00000367175.1	alternative 5' UTR
ENST00000367176.7	FLJ10384
ENST00000367177.4	MANE_select
ENST00000367177.4	alternative 5' UTR
ENST00000444037.1	FLJ39865
ENST00000670195.1	Assembled from SLRseq reads (SRP049776)
ENST00000339876.11	MANE_select
ENST00000339876.11	upstream ATG
ENST00000403080.5	FLJ33320
ENST00000404076.5	QC splicing correct
ENST00000505079.5	alternative 5' UTR
ENST00000367173.7	KIAA0756
ENST00000425360.5	FLJ14647
ENST00000495396.5	FLJ46866
ENST00000492085.1	DKFZp686J0597, DKFZp686J0497, DKFZp686P0597, FLJ45272
ENST00000413225.5	QC splicing correct
ENST00000447819.1	DKFZp686E03196
ENST00000638378.1	alternative 5' UTR
ENST00000532366.2	alternative 3' UTR
ENST00000532366.2	alternative 5' UTR
ENST00000639302.1	alternative 3' UTR
ENST00000640326.1	alternative 3' UTR
ENST00000331830.7	FLJ37193
ENST00000331830.7	MANE_select
ENST00000481872.6	FLJ42746
ENST00000367167.4	MANE_select
ENST00000264515.11	MANE_select
ENST00000367162.8	KIAA0472
ENST00000367162.8	MANE_select
ENST00000358024.8	MANE_select
ENST00000495538.5	novel transcript KIAA0481
ENST00000468846.5	QC splicing correct
ENST00000330675.12	CAGE supported TSS
ENST00000330675.12	novel transcript
ENST00000648708.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000367157.6	FLJ90349 and DKFZp434J037
ENST00000367157.6	MANE_select
ENST00000367157.6	upstream ATG
ENST00000367155.8	FLJ10748
ENST00000367155.8	MANE_select
ENST00000367155.8	alternative 5' UTR
ENST00000367156.7	FLJ39271
ENST00000367156.7	alternative 5' UTR
ENST00000460687.5	novel transcript
ENST00000607173.5	alternative 5' UTR
ENST00000491471.5	alternative 5' UTR
ENST00000491471.5	novel transcript
ENST00000606887.5	alternative 5' UTR
ENST00000447832.1	FLJ33178
ENST00000476884.1	novel transcript
ENST00000367153.9	MANE_select
ENST00000495594.2	QC splicing correct
ENST00000429964.7	MANE_select
ENST00000429964.7	alternative 5' UTR
ENST00000419301.1	alternative 5' UTR
ENST00000489617.5	DKFZp761L1515
ENST00000475956.5	QC splicing correct
ENST00000367147.9	MANE_select
ENST00000489709.5	QC splicing correct
ENST00000614644.1	NMD likely if extended
ENST00000465651.1	novel transcript
ENST00000471425.1	novel transcript
ENST00000478555.1	novel transcript FLJ45392
ENST00000357992.9	MANE_select
ENST00000468523.2	alternative 5' UTR
ENST00000460934.1	novel transcript DKFZp666D0110
ENST00000367145.4	MANE_select
ENST00000367142.5	MANE_select
ENST00000464938.1	putative novel transcript
ENST00000367139.8	MANE_select
ENST00000235932.8	alternative 5' UTR
ENST00000414729.1	alternative 5' UTR
ENST00000648961.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000367137.4	MANE_select
ENST00000656763.1	Assembled from SLRseq reads (SRP049776)
ENST00000664917.1	Assembled from SLRseq reads (SRP049776)
ENST00000664013.1	Assembled from SLRseq reads (SRP049776)
ENST00000664074.1	Assembled from SLRseq reads (SRP049776)
ENST00000659611.1	Assembled from SLRseq reads (SRP049776)
ENST00000659861.1	Assembled from SLRseq reads (SRP049776)
ENST00000664067.1	Assembled from SLRseq reads (SRP049776)
ENST00000662563.1	Assembled from SLRseq reads (SRP049776)
ENST00000659357.1	Assembled from SLRseq reads (SRP049776)
ENST00000669196.1	Assembled from SLRseq reads (SRP049776)
ENST00000670417.1	Assembled from SLRseq reads (SRP049776)
ENST00000669230.1	Assembled from SLRseq reads (SRP049776)
ENST00000656162.1	Assembled from SLRseq reads (SRP049776)
ENST00000653632.1	Assembled from SLRseq reads (SRP049776)
ENST00000658744.1	Assembled from SLRseq reads (SRP049776)
ENST00000653838.1	Assembled from SLRseq reads (SRP049776)
ENST00000662659.1	Assembled from SLRseq reads (SRP049776)
ENST00000670773.1	Assembled from SLRseq reads (SRP049776)
ENST00000656452.1	Assembled from SLRseq reads (SRP049776)
ENST00000665342.1	Assembled from SLRseq reads (SRP049776)
ENST00000652821.1	Assembled from SLRseq reads (SRP049776)
ENST00000653906.1	Assembled from SLRseq reads (SRP049776)
ENST00000367136.5	MANE_select
ENST00000460624.5	FLJ32569
ENST00000460624.5	novel transcript
ENST00000469861.1	putative novel transcript
ENST00000461807.1	novel transcript
ENST00000367135.8	MANE_select
ENST00000367128.8	MANE_select
ENST00000341209.9	QC splicing correct
ENST00000470041.5	QC splicing correct
ENST00000470041.5	not best-in-genome evidence
ENST00000431655.2	novel transcript
ENST00000481737.1	novel transcript
ENST00000468509.1	QC splicing correct
ENST00000658867.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000367126.5	MANE_select
ENST00000331555.10	MANE_select
ENST00000678498.1	EST evidence: AU100136.1, AI922828.1, AI818628.1, AI674913.1,
ENST00000678498.1	Swiss-Prot isoform: P14091-2.3
ENST00000358184.7	MANE_select
ENST00000358184.7	Swiss-Prot isoform: P14091.3
ENST00000360218.3	Swiss-Prot isoform: P14091-3.3
ENST00000360218.3	confirm experimentally
ENST00000360218.3	dbSNP rs782447864 (Splice Acceptor Variant)
ENST00000360218.3	non canonical polymorphism
ENST00000678712.1	mRNA evidence: D38104.1
ENST00000677924.1	EST evidence: DB242347.1
ENST00000677780.1	EST evidence: DA589013.1
ENST00000581977.7	MANE_select
ENST00000605726.1	alternative 5' UTR
ENST00000579436.7	MANE_select
ENST00000271764.7	MANE_select
ENST00000654354.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669393.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000649163.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000367103.4	MANE_select
ENST00000640756.1	CAGE supported TSS
ENST00000423557.1	CAGE supported TSS
ENST00000423557.1	LR annotation
ENST00000423557.1	MANE_select
ENST00000471071.1	CAGE supported TSS
ENST00000662320.1	CAGE supported TSS
ENST00000656872.2	CAGE supported TSS
ENST00000656872.2	upstream ATG
ENST00000659997.2	CAGE supported TSS
ENST00000659997.2	upstream ATG
ENST00000340758.7	CAGE supported TSS
ENST00000367098.6	MANE_select
ENST00000294984.7	MANE_select
ENST00000367091.8	MANE_select
ENST00000525793.5	alternative 5' UTR
ENST00000529560.1	alternative 5' UTR
ENST00000356495.5	MANE_select
ENST00000324863.6	QC splicing correct
ENST00000324852.9	MANE_select
ENST00000359470.6	MANE_select
ENST00000545806.5	alternative 5' UTR
ENST00000618513.4	alternative 5' UTR
ENST00000367080.8	MANE_select
ENST00000315927.9	DKFZp451J1719
ENST00000315927.9	MANE_select
ENST00000367078.8	MANE_select
ENST00000367078.8	alternative 5' UTR
ENST00000452902.6	alternative 5' UTR
ENST00000367070.8	MANE_select
ENST00000421786.5	alternative 5' UTR
ENST00000645323.1	NP_001287832.1
ENST00000367064.9	MANE_select
ENST00000644836.1	NP_001287833.1
ENST00000644836.1	alternative 3' UTR
ENST00000367057.8	CAGE supported TSS
ENST00000367057.8	MANE_select
ENST00000475194.1	QC splicing correct
ENST00000400960.7	QC splicing correct
ENST00000367049.9	MANE_select
ENST00000367049.9	QC splicing correct
ENST00000367051.6	QC splicing correct
ENST00000367053.6	QC splicing correct
ENST00000450439.5	QC splicing correct
ENST00000436595.1	QC splicing correct
ENST00000529814.1	not organism-supported
ENST00000508064.7	MANE_select
ENST00000530905.1	QC splicing correct
ENST00000530905.1	not best-in-genome evidence
ENST00000294997.10	QC splicing correct
ENST00000367042.6	CAGE supported TSS
ENST00000367042.6	MANE_select
ENST00000462968.2	alternative 3' UTR
ENST00000652846.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000487977.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000487977.2	FLJ35650
ENST00000655169.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657366.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435542.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000310833.12	MANE_select
ENST00000367036.7	CAGE supported TSS
ENST00000648286.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000661734.1	Assembled from SLRseq reads (SRP049776)
ENST00000367033.4	MANE_select
ENST00000668227.1	Assembled from SLRseq reads (SRP049776)
ENST00000652300.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000568112.2	Assembled from SLRseq reads (SRP049776)
ENST00000666184.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671344.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661534.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660747.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668810.1	Assembled from SLRseq reads (SRP049776)
ENST00000665460.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661914.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666483.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654974.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661953.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667146.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664508.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660754.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670677.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665387.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667095.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665597.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667236.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667190.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658311.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448988.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665245.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657739.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655463.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000429156.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451937.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670788.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660782.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657184.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660261.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667171.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000458250.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440276.2	novel transcript
ENST00000657064.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000361322.3	MANE_select
ENST00000361322.3	alternative 5' UTR
ENST00000651530.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000494990.1	novel transcript
ENST00000356082.9	MANE_select
ENST00000441672.1	novel transcript
ENST00000367029.5	MANE_select
ENST00000615289.4	alternative 5' UTR
ENST00000367027.5	MANE_select
ENST00000367025.8	MANE_select
ENST00000479796.5	alternative 5' UTR
ENST00000367024.5	alternative 5' UTR
ENST00000487271.5	alternative 5' UTR
ENST00000488702.1	novel transcript
ENST00000467830.1	novel transcript
ENST00000294811.2	MANE_select
ENST00000367021.8	MANE_select
ENST00000456314.1	alternative 5' UTR
ENST00000491415.7	MANE_select
ENST00000491415.7	MGC29875
ENST00000652023.1	CAGE supported TSS
ENST00000534859.2	QC splicing correct
ENST00000534859.2	non canonical TEC
ENST00000662450.1	Assembled from SLRseq reads (SRP049776)
ENST00000367012.4	MANE_select
ENST00000261458.8	FLJ10724
ENST00000261458.8	MANE_select
ENST00000670026.1	Assembled from SLRseq reads (SRP049776)
ENST00000653429.1	Assembled from SLRseq reads (SRP049776)
ENST00000640710.1	alternative 3' UTR
ENST00000271751.10	MANE_select
ENST00000640528.1	alternative 3' UTR
ENST00000639385.1	NMD likely if extended
ENST00000534478.5	alternative 5' UTR
ENST00000533469.5	alternative 5' UTR
ENST00000419091.7	MANE_select
ENST00000472734.1	novel transcript
ENST00000367005.8	FLJ10876
ENST00000261464.10	MANE_select
ENST00000667187.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664255.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669618.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661331.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654699.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666134.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662549.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662409.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660130.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670353.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663693.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000534914.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667464.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665802.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663427.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656082.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653287.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653721.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656886.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659698.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657539.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653498.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660843.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654903.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656159.1	Assembled from SLRseq reads (SRP049776)
ENST00000680073.1	CAGE supported TSS
ENST00000680073.1	MANE_select
ENST00000680073.1	NAGNAG splice site
ENST00000367001.5	MANE_select
ENST00000452024.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452024.3	QC splicing correct
ENST00000670044.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660041.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653827.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664125.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000430123.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667263.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666922.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667986.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661623.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654864.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661855.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653761.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000366999.9	MANE_select
ENST00000667973.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000458662.1	QC splicing correct
ENST00000366997.9	MANE_select
ENST00000366996.1	variant 2; alternatively spliced in 5' UTR
ENST00000498690.1	QC splicing correct
ENST00000429499.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670360.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000366994.8	MANE_select
ENST00000462910.1	novel transcript
ENST00000460867.1	novel transcript
ENST00000366991.5	MANE_select
ENST00000669915.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663668.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658599.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667543.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000443448.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669457.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664988.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000261461.7	MANE_select
ENST00000537030.3	NP_001186685.1
ENST00000498129.6	QC splicing correct
ENST00000442146.1	QC splicing correct
ENST00000261455.9	FLJ10874
ENST00000261455.9	MANE_select
ENST00000478166.5	NMD likely if extended
ENST00000666901.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000366988.5	MANE_select
ENST00000439570.2	Assembled from SLRseq reads (SRP049776)
ENST00000661486.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651527.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000669720.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000341491.9	MANE_select
ENST00000341491.9	alternative 5' UTR
ENST00000492118.2	QC splicing correct
ENST00000492118.2	non canonical TEC
ENST00000427949.1	FLJ40118
ENST00000294829.5	FLJ32796
ENST00000294829.5	MANE_select
ENST00000653931.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000243440.2	MANE_select
ENST00000478275.1	FLJ36352
ENST00000366977.8	MANE_select
ENST00000473995.5	novel transcript
ENST00000487995.1	novel transcript
ENST00000530441.5	NMD exception
ENST00000366973.8	DKFZp686O2377
ENST00000366974.9	MANE_select
ENST00000332912.3	MANE_select
ENST00000665265.1	Assembled from SLRseq reads (SRP049776)
ENST00000366971.9	MANE_select
ENST00000366966.6	alternative 5' UTR
ENST00000490792.1	alternative 5' UTR
ENST00000366962.8	FLJ12793
ENST00000366962.8	MANE_select
ENST00000473303.1	FLJ36628
ENST00000366960.8	MANE_select
ENST00000417161.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653715.1	Assembled from SLRseq reads (SRP049776)
ENST00000659552.1	Assembled from SLRseq reads (SRP049776)
ENST00000658271.1	Assembled from RACEseq reads
ENST00000608399.1	nested 454 RNA-Seq supported
ENST00000610094.1	nested 454 RNA-Seq supported
ENST00000471129.1	alternative 5' UTR
ENST00000366958.9	MANE_select
ENST00000366958.9	alternative 5' UTR
ENST00000366958.9	non canonical U12
ENST00000435016.2	alternative 5' UTR
ENST00000435016.2	non canonical U12
ENST00000607425.1	alternative 5' UTR
ENST00000366957.10	MANE_select
ENST00000366957.10	non canonical U12
ENST00000416415.2	QC splicing correct
ENST00000416415.2	non canonical TEC
ENST00000416415.2	non canonical U12
ENST00000366956.10	MANE_select
ENST00000366955.8	MANE_select
ENST00000658732.1	Assembled from RACEseq reads
ENST00000486921.5	QC splicing correct
ENST00000444842.7	MANE_select
ENST00000632868.1	CAGE supported TSS
ENST00000259154.9	MANE_select
ENST00000495537.1	novel transcript
ENST00000465650.1	novel transcript
ENST00000307340.8	MANE_select
ENST00000430890.5	novel transcript
ENST00000445619.5	novel transcript
ENST00000408911.8	MANE_select
ENST00000366940.6	alternative 5' UTR
ENST00000360012.7	alternative 5' UTR
ENST00000361395.6	alternative 5' UTR
ENST00000359162.6	alternative 5' UTR
ENST00000493603.5	alternative 5' UTR
ENST00000487276.5	alternative 5' UTR
ENST00000493748.5	alternative 5' UTR
ENST00000475275.5	alternative 5' UTR
ENST00000469486.5	alternative 5' UTR
ENST00000459955.5	alternative 5' UTR
ENST00000481543.1	alternative 5' UTR
ENST00000366935.8	FLJ10252
ENST00000366935.8	MANE_select
ENST00000366933.5	MANE_select
ENST00000659987.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664236.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000366932.4	MANE_select
ENST00000366930.9	MANE_select
ENST00000366930.9	isoform A
ENST00000366929.4	isoform B
ENST00000625474.1	Ge D, et al. (2014) PMID 24879147
ENST00000663551.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668967.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655362.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663684.1	Assembled from SLRseq reads (SRP049776)
ENST00000657470.1	Assembled from SLRseq reads (SRP049776)
ENST00000655283.1	Assembled from SLRseq reads (SRP049776)
ENST00000661230.1	Assembled from SLRseq reads (SRP049776)
ENST00000654859.1	Assembled from SLRseq reads (SRP049776)
ENST00000668290.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668290.1	Assembled from SLRseq reads (SRP049776)
ENST00000669535.1	Assembled from SLRseq reads (SRP049776)
ENST00000670576.1	Assembled from SLRseq reads (SRP049776)
ENST00000670257.1	Assembled from SLRseq reads (SRP049776)
ENST00000658274.1	Assembled from SLRseq reads (SRP049776)
ENST00000441331.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000366928.10	MANE_select
ENST00000655747.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664470.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664470.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000653604.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667916.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658964.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652910.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651890.1	LOC388739
ENST00000366926.4	MANE_select
ENST00000366923.8	MANE_select
ENST00000322067.12	MANE_select
ENST00000322067.12	genebuild_only_MANE
ENST00000498237.3	alternative 5' UTR
ENST00000366922.3	MANE_select
ENST00000358951.7	MANE_select
ENST00000358951.7	QC splicing correct
ENST00000457142.1	chromosome 20 open reading frame 45 (C20orf45) pseudogene
ENST00000446169.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000366917.6	MANE_select
ENST00000602936.1	not best-in-genome evidence
ENST00000294889.6	FLJ14146
ENST00000294889.6	MANE_select
ENST00000366913.8	FLJ20605
ENST00000366913.8	MANE_select
ENST00000496078.1	novel transcript
ENST00000472447.1	novel transcript
ENST00000366910.10	FLJ22390
ENST00000366910.10	MANE_select
ENST00000492847.1	novel transcript
ENST00000496110.1	novel transcript
ENST00000472269.1	novel transcript
ENST00000651706.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000366903.8	MANE_select
ENST00000427693.1	CAGE supported TSS
ENST00000427693.1	homeobox domain
ENST00000448432.1	chromosome 6 open reading frame 119 (C6orf119) pseudogene
ENST00000668399.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660516.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659256.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656904.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664578.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653714.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666589.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670872.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665847.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652927.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660437.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662740.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000434398.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663688.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669070.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000366899.4	MANE_select
ENST00000665303.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000431729.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668844.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658927.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652067.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000455363.2	QC splicing correct
ENST00000343410.7	MANE_select
ENST00000366890.5	isoform 2
ENST00000352967.9	MANE_select
ENST00000352967.9	isoform 1
ENST00000661918.1	Assembled from SLRseq reads (SRP049776)
ENST00000664981.1	Assembled from RACEseq reads
ENST00000668515.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000344922.10	MANE_select
ENST00000467190.1	QC splicing correct
ENST00000340020.11	MANE_select
ENST00000340934.10	MANE_select
ENST00000489191.1	QC splicing correct
ENST00000434700.5	alternative 5' UTR
ENST00000391880.6	FLJ43505
ENST00000360827.6	QC splicing correct
ENST00000456298.5	alternative 5' UTR
ENST00000654074.1	Assembled from SLRseq reads (SRP049776)
ENST00000675850.1	MANE_select
ENST00000676139.1	upstream ATG
ENST00000675039.1	alternative 5' UTR
ENST00000675961.1	alternative 5' UTR
ENST00000360254.3	NMD likely if extended
ENST00000360254.3	non canonical TEC
ENST00000284476.7	CAGE supported TSS
ENST00000659290.1	Assembled from SLRseq reads (SRP049776)
ENST00000664643.1	Assembled from SLRseq reads (SRP049776)
ENST00000657846.1	Assembled from SLRseq reads (SRP049776)
ENST00000642603.2	CAGE supported TSS
ENST00000642603.2	LR annotation
ENST00000642603.2	MANE_select
ENST00000645434.1	alternative 5' UTR
ENST00000407096.6	alternative 5' UTR
ENST00000484758.6	QC splicing correct
ENST00000484758.6	non canonical conserved
ENST00000366878.9	MANE_select
ENST00000366878.9	genebuild_only_MANE
ENST00000608996.5	non canonical conserved
ENST00000342943.3	NMD likely if extended
ENST00000366875.5	MANE_select
ENST00000484873.6	QC splicing correct
ENST00000366872.10	CAGE supported TSS
ENST00000366872.10	LR annotation
ENST00000366872.10	MANE_select
ENST00000467384.6	QC splicing correct
ENST00000295006.6	MANE_select
ENST00000474026.5	FLJ42761
ENST00000487223.5	FLJ39928
ENST00000498027.5	FLJ13789
ENST00000463997.1	FLJ32276
ENST00000343537.12	MANE_select
ENST00000634905.1	not best-in-genome evidence
ENST00000424254.6	NP_001129587.1
ENST00000366862.10	KIAA0483, FLJ10766
ENST00000366862.10	MANE_select
ENST00000323699.9	MANE_select
ENST00000664126.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000481213.5	QC splicing correct
ENST00000391875.6	upstream uORF
ENST00000281701.11	MANE_select
ENST00000340871.8	QC splicing correct
ENST00000340871.8	upstream uORF
ENST00000366857.9	DKFZp779B0350
ENST00000465271.6	MANE_select
ENST00000366860.9	novel transcript
ENST00000468318.5	novel transcript
ENST00000477413.1	novel transcript
ENST00000469200.1	novel transcript
ENST00000414423.9	CAGE supported TSS
ENST00000414423.9	MANE_select
ENST00000480676.2	alternative 3' UTR
ENST00000471578.5	novel transcript
ENST00000483512.5	novel transcript
ENST00000498126.5	novel transcript
ENST00000496372.1	novel transcript
ENST00000470602.2	QC splicing correct
ENST00000498382.5	novel transcript
ENST00000478120.5	novel transcript
ENST00000481095.5	novel transcript
ENST00000470788.1	novel transcript
ENST00000489556.5	novel transcript
ENST00000496277.5	QC splicing correct
ENST00000492470.1	novel transcript
ENST00000479227.1	novel transcript
ENST00000272133.4	FLJ38993
ENST00000272133.4	MANE_select
ENST00000437416.3	Assembled from SLRseq reads (SRP049776)
ENST00000663810.1	Assembled from SLRseq reads (SRP049776)
ENST00000657834.1	Assembled from SLRseq reads (SRP049776)
ENST00000652162.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000657658.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662308.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651912.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000669302.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657178.1	Assembled from SLRseq reads (SRP049776)
ENST00000445597.6	QC splicing correct
ENST00000445597.6	confirm experimentally
ENST00000498360.5	novel transcript
ENST00000272163.9	MANE_select
ENST00000651341.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000425080.1	alternative 5' UTR
ENST00000421383.1	alternative 5' UTR
ENST00000654950.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664202.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664202.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000655141.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651771.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000657033.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666812.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651661.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651661.2	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000448264.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655987.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655179.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671442.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665855.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000304786.12	MANE_select
ENST00000651465.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000434499.2	LEFTY family pseudogene
ENST00000272167.10	MANE_select
ENST00000272167.10	alternative 5' UTR
ENST00000366835.8	MANE_select
ENST00000474478.5	non canonical TEC
ENST00000436966.1	alternative 5' UTR
ENST00000272134.5	MANE_select
ENST00000343818.11	MANE_select
ENST00000472798.2	alternative 5' UTR
ENST00000366820.10	MANE_select
ENST00000272091.8	MANE_select
ENST00000658138.1	Assembled from SLRseq reads (SRP049776)
ENST00000366816.5	Alternatively spliced 5' UTR, shares CDS with RP11-396C23.1-001
ENST00000366816.5	alternative 5' UTR
ENST00000366815.10	CAGE supported TSS
ENST00000366815.10	LR annotation
ENST00000366815.10	MANE_select
ENST00000655399.1	alternative 5' UTR
ENST00000666609.1	alternative 5' UTR
ENST00000661429.1	alternative 5' UTR
ENST00000366813.1	alternative 5' UTR
ENST00000656201.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655338.1	Assembled from SLRseq reads (SRP049776)
ENST00000366812.6	MANE_select
ENST00000366810.6	MANE_select
ENST00000681046.1	MANE_select
ENST00000359525.2	Alternatively spliced 5' UTR, shares CDS with RP11-449N9.1-002 (partial)
ENST00000359525.2	alternative 5' UTR
ENST00000366794.10	MANE_select
ENST00000366792.3	NMD likely if extended
ENST00000671364.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000366788.8	MANE_select
ENST00000366788.8	QC splicing correct
ENST00000664298.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000524196.6	alternative 5' UTR
ENST00000676888.1	align_id:3534354|asmbl_24519
ENST00000678835.1	align_id:3534377|asmbl_24542
ENST00000677529.1	align_id:3534352|asmbl_24517
ENST00000677748.1	long_read_pipeline_2
ENST00000678655.1	align_id:3534378|asmbl_24543
ENST00000676945.1	align_id:3534355|asmbl_24520
ENST00000676945.1	long_read_pipeline_2
ENST00000678820.1	align_id:3534375|asmbl_24540
ENST00000678233.1	align_id:3534350|asmbl_24515
ENST00000677599.1	align_id:3534357|asmbl_24522
ENST00000676840.1	CHS.4753.1
ENST00000678784.1	CHS.4753.6r
ENST00000679088.1	align_id:3534332|asmbl_24497
ENST00000676747.1	align_id:3534369|asmbl_24534
ENST00000678021.1	align_id:3534364|asmbl_24529
ENST00000495488.5	alternative 5' UTR
ENST00000677880.1	align_id:3534373|asmbl_24538
ENST00000366783.8	MANE_select
ENST00000422240.6	NP_036618.2
ENST00000677596.1	align_id:3534381|asmbl_24546
ENST00000678776.1	align_id:3534376|asmbl_24541
ENST00000626989.3	align_id:3534331|asmbl_24496
ENST00000626989.3	upstream ATG
ENST00000677065.1	align_id:3534342|asmbl_24507
ENST00000471728.2	align_id:3534380|asmbl_24545
ENST00000487450.1	QC splicing correct
ENST00000676616.1	align_id:1288446|asmbl_8349
ENST00000366777.4	MANE_select
ENST00000476488.1	QC splicing correct
ENST00000334218.9	QC splicing correct
ENST00000462553.2	QC splicing correct
ENST00000655100.1	Assembled from SLRseq reads (SRP049776)
ENST00000657898.1	Assembled from SLRseq reads (SRP049776)
ENST00000660249.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654159.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000343776.10	MANE_select
ENST00000343776.10	MGC42493
ENST00000480897.5	FLJ30704
ENST00000679575.1	alternative 5' UTR
ENST00000681447.1	alternative 5' UTR
ENST00000366759.9	upstream ATG
ENST00000681242.1	poly-adenylated
ENST00000681242.1	upstream ATG
ENST00000681685.1	upstream ATG
ENST00000478768.3	poly-adenylated
ENST00000617596.5	CAGE supported TSS
ENST00000617596.5	MANE_select
ENST00000680202.1	alternative 5' UTR
ENST00000606873.1	poly-adenylated
ENST00000620518.5	CAGE supported TSS
ENST00000620518.5	FLJ12517
ENST00000620518.5	MANE_select
ENST00000620518.5	upstream ATG
ENST00000438896.3	upstream ATG
ENST00000413347.2	QC splicing correct
ENST00000654998.1	Assembled from SLRseq reads (SRP049776)
ENST00000658160.1	Assembled from SLRseq reads (SRP049776)
ENST00000661157.1	Assembled from SLRseq reads (SRP049776)
ENST00000666622.1	Assembled from SLRseq reads (SRP049776)
ENST00000665412.1	Assembled from SLRseq reads (SRP049776)
ENST00000665817.1	Assembled from SLRseq reads (SRP049776)
ENST00000272164.6	MANE_select
ENST00000284523.2	FLJ31716
ENST00000284523.2	MANE_select
ENST00000272102.10	FLJ20613
ENST00000272102.10	MANE_select
ENST00000272139.5	MANE_select
ENST00000366732.5	QC splicing correct
ENST00000366733.5	Alternatively spliced 5' UTR; shares CDS with RP5-881P19.5-001
ENST00000366733.5	alternative 5' UTR
ENST00000366734.5	Alternatively spliced 5' UTR; shares CDS with RP5-881P19.5-001
ENST00000366734.5	alternative 5' UTR
ENST00000366735.5	Alternatively spliced 5' UTR; shares CDS with RP5-881P19.5-001
ENST00000366735.5	alternative 5' UTR
ENST00000366736.5	Alternatively spliced 5' UTR; shares CDS with RP5-881P19.5-001
ENST00000366736.5	alternative 5' UTR
ENST00000366739.5	Alternatively spliced 5' UTR; shares CDS with RP5-881P19.5-001
ENST00000366739.5	alternative 5' UTR
ENST00000366740.5	Alternatively spliced 5' UTR; shares CDS with RP5-881P19.5-001
ENST00000366740.5	alternative 5' UTR
ENST00000366741.5	Alternatively spliced 5' UTR; shares CDS with RP5-881P19.5-001
ENST00000366741.5	alternative 5' UTR
ENST00000366742.5	Alternatively spliced 5' UTR; shares CDS with RP5-881P19.5-001
ENST00000366742.5	alternative 5' UTR
ENST00000366744.5	Alternatively spliced 5' UTR; shares CDS with RP5-881P19.5-001
ENST00000366744.5	alternative 5' UTR
ENST00000295008.8	Alternatively spliced 5' UTR; shares CDS with RP5-881P19.5-001
ENST00000295008.8	alternative 5' UTR
ENST00000366746.7	Alternatively spliced 5' UTR; shares CDS with RP5-881P19.5-001
ENST00000366746.7	alternative 5' UTR
ENST00000336300.9	Alternatively spliced 5' UTR; shares CDS with RP5-881P19.5-001
ENST00000336300.9	alternative 5' UTR
ENST00000336520.8	Alternatively spliced 5' UTR; shares CDS with RP5-881P19.5-001
ENST00000336520.8	MANE_select
ENST00000336520.8	alternative 5' UTR
ENST00000391867.8	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000457264.5	Alternatively spliced 5' UTR; shares CDS with partial RP5-881P19.5-001
ENST00000457264.5	alternative 5' UTR
ENST00000411464.3	alternative 5' UTR
ENST00000495434.1	alternative 5' UTR
ENST00000668268.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000366730.5	Alternatively spliced 5' UTR, shares CDS with RP11-520H14.2-001.
ENST00000366730.5	alternative 5' UTR
ENST00000312726.9	MANE_select
ENST00000366726.5	Alternatively spliced 5' UTR, shares CDS with RP11-520H14.2-001.
ENST00000366726.5	alternative 5' UTR
ENST00000366723.5	QC splicing correct
ENST00000366718.5	Alternatively spliced 5' UTR, shares CDS with RP11-520H14.2-001
ENST00000366718.5	alternative 5' UTR
ENST00000470040.5	DKFZp666D023
ENST00000470040.5	QC splicing correct
ENST00000366716.1	Alternatively spliced 5' UTR, shares CDS with RP11-520H14.2-001.
ENST00000366716.1	alternative 5' UTR
ENST00000480056.2	QC splicing correct
ENST00000366714.3	MANE_select
ENST00000366711.4	LOC200205
ENST00000366711.4	MANE_select
ENST00000484749.5	FLJ12734
ENST00000657820.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000657820.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000570156.7	NP_001258152.2
ENST00000570156.7	confirm experimentally
ENST00000680850.1	CAGE supported TSS
ENST00000680850.1	MANE_select
ENST00000680850.1	confirm experimentally
ENST00000284548.16	DKFZp451F056
ENST00000284548.16	KIAA1556
ENST00000422127.5	NP_001092093.2
ENST00000422127.5	confirm experimentally
ENST00000366704.2	confirm experimentally
ENST00000662438.1	confirm experimentally
ENST00000636476.2	NAGNAG splice site
ENST00000636476.2	confirm experimentally
ENST00000602685.1	DKFZp434C153
ENST00000664957.1	NAGNAG splice site
ENST00000474237.2	DKFZp666E245
ENST00000660585.1	NMD likely if extended
ENST00000602529.2	FLJ52598
ENST00000602947.3	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000602517.1	FLJ46590
ENST00000284551.11	FLJ40506
ENST00000284551.11	MANE_select
ENST00000366699.3	FLJ90385
ENST00000663818.1	Assembled from RACEseq reads
ENST00000366698.7	MANE_select
ENST00000366697.6	Alternatively spliced 5' UTR, shares CDS with RP5-915N17.1-001
ENST00000366697.6	FLJ30864
ENST00000366697.6	alternative 5' UTR
ENST00000295033.7	Alternatively spliced 5' UTR, shares CDS with RP5-915N17.1-001
ENST00000295033.7	alternative 5' UTR
ENST00000456946.6	NP_001128327.1
ENST00000355586.4	alternative 5' UTR
ENST00000457345.2	alternative 5' UTR
ENST00000520264.1	alternative 5' UTR
ENST00000366696.2	MANE_select
ENST00000450202.2	DKFZp547I014
ENST00000450202.2	FLJ45055
ENST00000620438.1	FLJ33901
ENST00000305943.9	MANE_select
ENST00000305943.9	NP_001010858
ENST00000482739.2	QC splicing correct
ENST00000366691.4	MANE_select
ENST00000662083.1	Assembled from SLRseq reads (SRP049776)
ENST00000658958.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666388.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651412.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000654028.1	Assembled from SLRseq reads (SRP049776)
ENST00000653511.1	Assembled from SLRseq reads (SRP049776)
ENST00000656366.1	Assembled from SLRseq reads (SRP049776)
ENST00000660017.1	Assembled from SLRseq reads (SRP049776)
ENST00000662321.1	Assembled from SLRseq reads (SRP049776)
ENST00000436334.2	Assembled from SLRseq reads (SRP049776)
ENST00000366690.5	MANE_select
ENST00000366690.5	Protein translation is extended by five amino acids at the N-terminal, which are additional to the translation found in Sw:P20338
ENST00000284617.7	MANE_select
ENST00000284617.7	genebuild_only_MANE
ENST00000366684.7	MANE_select
ENST00000261396.6	MANE_select
ENST00000417605.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000344517.5	MANE_select
ENST00000258243.7	MANE_select
ENST00000650825.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000661713.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669450.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435973.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669533.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661272.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660480.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663288.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000366672.5	MANE_select
ENST00000485438.1	QC splicing correct
ENST00000440729.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000391860.7	CAGE supported TSS
ENST00000391860.7	MANE_select
ENST00000633012.1	CAGE supported TSS
ENST00000366669.9	MANE_select
ENST00000657140.1	Assembled from SLRseq reads (SRP049776)
ENST00000681514.1	alternative 5' UTR
ENST00000681514.1	upstream ATG
ENST00000680041.1	alternative 5' UTR
ENST00000680041.1	upstream ATG
ENST00000366667.6	MANE_select
ENST00000366667.6	upstream ATG
ENST00000681269.1	alternative 5' UTR
ENST00000679684.1	upstream ATG
ENST00000271971.7	MANE_select
ENST00000366663.10	FLJ14525
ENST00000366663.10	MANE_select
ENST00000470540.5	CCDS44330.1
ENST00000470540.5	NP_001129966.1
ENST00000523410.1	CCDS44331.1
ENST00000523410.1	NP_001129967.1
ENST00000439341.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662719.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664342.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671303.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654598.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667181.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000366662.8	DKFZp547A206
ENST00000366661.9	CCDS1588.1
ENST00000366661.9	DKFZp667K0918, FLJ23785, FLJ22584
ENST00000366661.9	MANE_select
ENST00000310256.7	DKFZp434E0517
ENST00000310256.7	MANE_select
ENST00000366654.5	MANE_select
ENST00000494111.1	novel transcript
ENST00000466258.1	novel transcript
ENST00000366653.5	BC156316.1
ENST00000366653.5	BC157055.1
ENST00000366653.5	NP_001004342.3
ENST00000366653.5	confirm experimentally
ENST00000318906.6	DKFZp547B1713
ENST00000366649.7	MANE_select
ENST00000462669.1	novel transcript
ENST00000486384.5	novel transcript
ENST00000495795.1	novel transcript
ENST00000471936.1	novel transcript FLJ30562
ENST00000366647.9	MANE_select
ENST00000366645.1	MANE_select
ENST00000008440.9	FLJ14411
ENST00000295050.12	DKFZp547N043, FLJ14707
ENST00000295050.12	MANE_select
ENST00000492437.1	novel transcript
ENST00000469904.1	novel transcript
ENST00000366641.4	LR annotation
ENST00000366641.4	MANE_select
ENST00000666601.1	Extended 3' end with SLR-seq_HsBN_lib7: HsBN_lib7:Read_420710-Barcode%3DBC372:length%3D1421
ENST00000366639.9	MANE_select
ENST00000439617.8	MANE_select
ENST00000439617.8	non canonical U12
ENST00000366637.8	non canonical U12
ENST00000674635.1	MANE_select
ENST00000658542.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659372.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000457698.1	FLJ35881
ENST00000418460.3	KIAA1383
ENST00000418460.3	NP_061963.2
ENST00000418460.3	upstream ATG
ENST00000667494.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000366628.10	MANE_select
ENST00000366628.10	MGC13186
ENST00000258229.14	MANE_select
ENST00000258229.14	NP_055616.3
ENST00000344698.6	120878
ENST00000344698.6	KIAA0435
ENST00000366624.8	MANE_select
ENST00000659612.1	Assembled from SLRseq reads (SRP049776)
ENST00000366621.8	MANE_select
ENST00000366620.5	QC splicing correct
ENST00000651271.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000655369.1	Assembled from SLRseq reads (SRP049776)
ENST00000654531.1	Assembled from SLRseq reads (SRP049776)
ENST00000366618.8	MANE_select
ENST00000451795.1	QC splicing correct
ENST00000366615.10	LOC388753
ENST00000366615.10	LR annotation
ENST00000366615.10	MANE_select
ENST00000366615.10	NP_001193570.2
ENST00000040877.2	MANE_select
ENST00000653353.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000435574.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665108.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663964.1	Assembled from SLRseq reads (SRP049776)
ENST00000653099.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653099.1	Assembled from SLRseq reads (SRP049776)
ENST00000421207.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652079.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000660074.1	Assembled from SLRseq reads (SRP049776)
ENST00000664950.1	Assembled from SLRseq reads (SRP049776)
ENST00000667224.1	Assembled from SLRseq reads (SRP049776)
ENST00000366609.4	MANE_select
ENST00000665192.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664534.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000442382.1	FLJ45859
ENST00000662158.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651370.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000423963.1	QC splicing correct
ENST00000418557.1	LOC284527
ENST00000653884.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653723.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423175.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423175.2	QC splicing correct
ENST00000666699.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652109.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000668743.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656076.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653154.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662989.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662592.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451766.2	QC splicing correct
ENST00000654767.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659687.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000609649.1	CAGE supported TSS
ENST00000366607.5	MANE_select
ENST00000408888.8	MANE_select
ENST00000264183.9	MANE_select
ENST00000264183.9	alternative 5' UTR
ENST00000444620.2	QC splicing correct
ENST00000418304.1	alternative 5' UTR
ENST00000488594.5	alternative 5' UTR
ENST00000471812.5	alternative 5' UTR
ENST00000282841.9	CAGE supported TSS
ENST00000282841.9	MANE_select
ENST00000497327.1	alternative 5' UTR
ENST00000643418.1	alternative 3' UTR
ENST00000643418.1	alternative 5' UTR
ENST00000645655.1	alternative 5' UTR
ENST00000645655.1	upstream ATG
ENST00000647186.1	alternative 5' UTR
ENST00000647186.1	upstream ATG
ENST00000646624.1	alternative 5' UTR
ENST00000643410.1	upstream ATG
ENST00000645205.1	alternative 5' UTR
ENST00000645351.1	alternative 5' UTR
ENST00000645836.1	alternative 3' UTR
ENST00000645836.1	alternative 5' UTR
ENST00000645836.1	upstream ATG
ENST00000646281.1	alternative 5' UTR
ENST00000642503.1	alternative 3' UTR
ENST00000642503.1	alternative 5' UTR
ENST00000645069.1	alternative 3' UTR
ENST00000645069.1	alternative 5' UTR
ENST00000643758.1	upstream ATG
ENST00000645578.1	alternative 3' UTR
ENST00000645578.1	alternative 5' UTR
ENST00000645578.1	upstream ATG
ENST00000642431.1	alternative 3' UTR
ENST00000644604.1	alternative 5' UTR
ENST00000406207.5	alternative 5' UTR
ENST00000647418.1	CAGE supported TSS
ENST00000647418.1	alternative 3' UTR
ENST00000643994.1	alternative 3' UTR
ENST00000645582.1	FLJ36078
ENST00000642610.2	CAGE supported TSS
ENST00000642610.2	MANE_select
ENST00000647489.1	alternative 3' UTR
ENST00000647489.1	alternative 5' UTR
ENST00000647332.1	alternative 3' UTR
ENST00000643615.1	alternative 3' UTR
ENST00000646186.1	alternative 3' UTR
ENST00000644838.1	CAGE supported TSS
ENST00000644838.1	alternative 3' UTR
ENST00000643142.1	alternative 3' UTR
ENST00000643142.1	alternative 5' UTR
ENST00000643524.1	alternative 3' UTR
ENST00000646536.1	alternative 3' UTR
ENST00000644037.1	alternative 3' UTR
ENST00000646463.1	alternative 3' UTR
ENST00000646104.1	alternative 3' UTR
ENST00000645662.1	alternative 3' UTR
ENST00000645964.1	alternative 3' UTR
ENST00000642339.1	alternative 3' UTR
ENST00000646929.1	alternative 3' UTR
ENST00000482230.6	NMD likely if extended
ENST00000644910.1	alternative 3' UTR
ENST00000646842.1	NMD likely if extended
ENST00000647322.1	alternative 3' UTR
ENST00000647151.1	346544     346556
ENST00000366600.8	DKFZp434K1617
ENST00000366600.8	MANE_select
ENST00000675555.1	CAGE supported TSS
ENST00000612859.4	FLJ34178
ENST00000612859.4	QC splicing correct
ENST00000494378.1	FLJ26787
ENST00000494378.1	NEDO only evidence
ENST00000391854.7	MANE_select
ENST00000391854.7	genebuild_only_MANE
ENST00000366597.5	alternative 5' UTR
ENST00000484517.2	alternative 5' UTR
ENST00000389793.7	DKFZp781B0767
ENST00000389793.7	MANE_select
ENST00000389793.7	QC splicing correct
ENST00000412098.2	QC splicing correct
ENST00000264187.7	MANE_select
ENST00000650982.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000650982.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000419162.5	QC splicing correct
ENST00000366592.8	MANE_select
ENST00000354619.10	MANE_select
ENST00000637660.1	alternative 5' UTR
ENST00000334232.9	CAGE supported TSS
ENST00000334232.9	Isoform A
ENST00000334232.9	MANE_select
ENST00000359362.6	Isoform B
ENST00000481485.5	alternative 5' UTR
ENST00000454943.6	alternative 5' UTR
ENST00000527974.5	alternative 5' UTR
ENST00000352231.6	QC splicing correct
ENST00000352231.6	alternative 5' UTR
ENST00000406509.7	alternative 5' UTR
ENST00000529489.5	QC splicing correct
ENST00000529489.5	alternative 5' UTR
ENST00000341872.10	alternative 5' UTR
ENST00000238181.11	alternative 5' UTR
ENST00000366584.9	MANE_select
ENST00000526634.5	alternative 5' UTR
ENST00000366582.8	MANE_select
ENST00000651187.1	upstream ATG
ENST00000366578.6	CAGE supported TSS
ENST00000366578.6	LR annotation
ENST00000366578.6	MANE_select
ENST00000366577.10	CAGE supported TSS
ENST00000366577.10	LR annotation
ENST00000366577.10	MANE_select
ENST00000366577.10	overlapping uORF
ENST00000674797.2	upstream ATG
ENST00000463959.1	QC splicing correct
ENST00000366576.3	QC splicing correct
ENST00000366576.3	non canonical TEC
ENST00000652483.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000464121.3	MANE_select
ENST00000663658.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000366574.7	LR annotation
ENST00000366574.7	MANE_select
ENST00000366574.7	QC splicing correct
ENST00000366574.7	non canonical conserved
ENST00000609119.1	non canonical conserved
ENST00000661330.1	non canonical conserved
ENST00000604646.1	not best-in-genome evidence
ENST00000665394.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000422844.1	QC splicing correct
ENST00000657655.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660627.1	Assembled from RACEseq reads
ENST00000662327.1	Assembled from SLRseq reads (SRP049776)
ENST00000468573.5	FLJ31787
ENST00000676153.1	MANE_select
ENST00000675184.1	alternative 5' UTR
ENST00000615928.5	alternative 5' UTR
ENST00000676433.1	alternative 5' UTR
ENST00000427859.5	DKFZp667K2218
ENST00000427859.5	QC splicing correct
ENST00000427859.5	non canonical TEC
ENST00000428176.1	QC splicing correct
ENST00000428176.1	non canonical TEC
ENST00000458325.5	QC splicing correct
ENST00000650922.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000668221.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000319653.14	MANE_select
ENST00000319653.14	NP_064450
ENST00000681210.1	CAGE supported TSS
ENST00000681741.1	CAGE supported TSS
ENST00000455599.1	QC splicing correct
ENST00000318160.5	MANE_select
ENST00000457477.2	QC splicing correct
ENST00000457477.2	non canonical TEC
ENST00000431139.3	QC splicing correct
ENST00000653456.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654667.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652217.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000661275.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665532.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657836.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440928.6	CAGE supported TSS
ENST00000440928.6	MANE_select
ENST00000670763.1	Assembled from SLRseq reads (SRP049776)
ENST00000655863.1	Assembled from SLRseq reads (SRP049776)
ENST00000655181.1	Assembled from SLRseq reads (SRP049776)
ENST00000669820.1	Assembled from SLRseq reads (SRP049776)
ENST00000652871.1	Assembled from SLRseq reads (SRP049776)
ENST00000669530.1	Assembled from SLRseq reads (SRP049776)
ENST00000658165.1	Assembled from SLRseq reads (SRP049776)
ENST00000662773.1	Assembled from SLRseq reads (SRP049776)
ENST00000668538.1	Assembled from SLRseq reads (SRP049776)
ENST00000667955.1	Assembled from SLRseq reads (SRP049776)
ENST00000656080.1	Assembled from SLRseq reads (SRP049776)
ENST00000660219.1	Assembled from SLRseq reads (SRP049776)
ENST00000660302.1	Assembled from SLRseq reads (SRP049776)
ENST00000663708.1	Assembled from SLRseq reads (SRP049776)
ENST00000654758.1	Assembled from SLRseq reads (SRP049776)
ENST00000655137.1	Assembled from SLRseq reads (SRP049776)
ENST00000660633.1	Assembled from SLRseq reads (SRP049776)
ENST00000670701.1	Assembled from SLRseq reads (SRP049776)
ENST00000665712.1	Assembled from SLRseq reads (SRP049776)
ENST00000664580.1	Assembled from SLRseq reads (SRP049776)
ENST00000662663.1	Assembled from SLRseq reads (SRP049776)
ENST00000366560.4	MANE_select
ENST00000366559.9	MANE_select
ENST00000366557.8	QC splicing correct
ENST00000462265.5	QC splicing correct
ENST00000366554.3	MANE_select
ENST00000366553.3	FLJ10071, FLJ13361
ENST00000366553.3	MANE_select
ENST00000638018.1	alternative 5' UTR
ENST00000653014.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000461971.5	QC splicing correct
ENST00000472717.6	QC splicing correct
ENST00000478331.1	QC splicing correct
ENST00000519225.5	alternative 5' UTR
ENST00000366548.8	DKFZp434L013
ENST00000366548.8	MANE_select
ENST00000423131.5	alternative 5' UTR
ENST00000523590.5	QC splicing correct
ENST00000523590.5	alternative 5' UTR
ENST00000450748.1	alternative 5' UTR
ENST00000493702.5	QC splicing correct
ENST00000493702.5	exon 4 5'-canonical splice site
ENST00000493702.5	non canonical TEC
ENST00000521202.2	QC splicing correct
ENST00000419583.2	MANE_select
ENST00000357246.4	MANE_select
ENST00000536534.7	CAGE supported TSS
ENST00000536534.7	MANE_select
ENST00000314833.10	FLJ40773
ENST00000366545.5	FLJ40773
ENST00000656612.1	Assembled from SLRseq reads (SRP049776)
ENST00000666166.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000666220.1	Assembled from SLRseq reads (SRP049776)
ENST00000421878.2	QC splicing correct
ENST00000427176.1	QC splicing correct
ENST00000436756.5	QC splicing correct
ENST00000420830.1	QC splicing correct
ENST00000450226.2	QC splicing correct
ENST00000437691.1	QC splicing correct
ENST00000366542.6	MANE_select
ENST00000366542.6	QC splicing correct
ENST00000366542.6	non canonical U12
ENST00000366544.5	QC splicing correct
ENST00000366544.5	non canonical U12
ENST00000366543.5	QC splicing correct
ENST00000366543.5	non canonical U12
ENST00000492145.1	not organism-supported
ENST00000518289.5	noncanonical splice donor site between exons 1 and 2
ENST00000522191.5	QC splicing correct
ENST00000522191.5	alternative 5' UTR
ENST00000522191.5	non canonical U12
ENST00000523424.5	QC splicing correct
ENST00000523424.5	alternative 5' UTR
ENST00000523424.5	non canonical U12
ENST00000522995.1	alternative 5' UTR
ENST00000437499.1	QC splicing correct
ENST00000422938.1	QC splicing correct
ENST00000366541.8	MANE_select
ENST00000493334.1	QC splicing correct
ENST00000336199.9	alternative 3' UTR
ENST00000366540.5	alternative 3' UTR
ENST00000673466.1	MANE_select
ENST00000673466.1	genebuild_only_MANE
ENST00000680118.1	alternative 3' UTR
ENST00000263826.12	alternative 5' UTR
ENST00000652928.1	Assembled from SLRseq reads (SRP049776)
ENST00000358704.4	MANE_select
ENST00000655079.1	Assembled from SLRseq reads (SRP049776)
ENST00000656542.1	Assembled from SLRseq reads (SRP049776)
ENST00000308105.5	MANE_select
ENST00000486803.1	novel transcript
ENST00000470211.1	novel transcript
ENST00000366535.4	FLJ21861
ENST00000366535.4	MANE_select
ENST00000473875.5	novel transcript FLJ23552
ENST00000366534.9	MANE_select
ENST00000460986.5	novel transcript
ENST00000478554.5	novel transcript
ENST00000428042.1	DKFZp686A0738
ENST00000464170.1	novel transcript
ENST00000485888.1	novel transcript
ENST00000487449.1	novel transcript
ENST00000484738.1	novel transcript
ENST00000302550.16	FLJ21998, DKFZp586C1019
ENST00000302550.16	MANE_select
ENST00000666823.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000411948.7	FLJ43269
ENST00000411948.7	MANE_select
ENST00000498262.1	FLJ26988
ENST00000464757.1	DKFZp434I0835
ENST00000475997.6	alternative 3' UTR
ENST00000638230.1	alternative 3' UTR
ENST00000640264.1	NMD likely if extended
ENST00000640218.2	MANE_select
ENST00000440865.2	CAGE supported TSS
ENST00000639628.1	CAGE supported TSS
ENST00000638716.1	CAGE supported TSS
ENST00000639880.1	CAGE supported TSS
ENST00000640001.1	CAGE supported TSS
ENST00000638301.1	CAGE supported TSS
ENST00000483966.3	QC splicing correct
ENST00000366522.6	FLJ33608
ENST00000473686.5	novel transcript
ENST00000487845.5	novel transcript FLJ10531
ENST00000479260.1	novel transcript
ENST00000479923.1	novel transcript
ENST00000407071.7	CCDS44342.1
ENST00000407071.7	MANE_select
ENST00000490107.6	MANE_select
ENST00000426386.2	QC splicing correct
ENST00000651181.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000366514.5	FLJ23182
ENST00000366514.5	MANE_select
ENST00000483271.1	novel transcript
ENST00000366513.9	FLJ32001, DKFZp451A152, DKFZp451B077, FLJ00215
ENST00000366513.9	MANE_select
ENST00000366510.4	FLJ90697
ENST00000366510.4	MANE_select
ENST00000451123.5	QC splicing correct
ENST00000655681.1	Assembled from SLRseq reads (SRP049776)
ENST00000421003.5	FLJ12783
ENST00000505748.6	Assembled from SLRseq reads (SRP049776)
ENST00000663201.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419361.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652908.1	Assembled from SLRseq reads (SRP049776)
ENST00000662358.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426089.1	FLJ43187
ENST00000670093.1	Assembled from SLRseq reads (SRP049776)
ENST00000470300.5	DKFZp686P072
ENST00000366508.5	DKFZp686I2429, FLJ16456, FLJ38079, DKFZp434N093
ENST00000326225.3	FLJ32832
ENST00000648844.2	MANE_select
ENST00000483900.1	FLJ34191
ENST00000339986.8	MANE_select
ENST00000366503.3	MANE_select
ENST00000366503.3	MGC12466
ENST00000448299.7	MANE_select
ENST00000659037.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000623686.1	NP_997284.1
ENST00000472531.5	NP_001230669
ENST00000476312.1	FLJ27507
ENST00000462139.1	DKFZp686I07110
ENST00000652491.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000665024.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000391828.8	alternative 5' UTR
ENST00000391828.8	upstream ATG
ENST00000391827.3	upstream ATG
ENST00000336119.8	CAGE supported TSS
ENST00000336119.8	MANE_select
ENST00000336119.8	NP_001073289.1
ENST00000336119.8	upstream ATG
ENST00000348069.7	NP_899632.1
ENST00000348069.7	upstream ATG
ENST00000366496.7	upstream ATG
ENST00000474792.2	upstream ATG
ENST00000643234.2	upstream ATG
ENST00000641613.1	ENA ID EGAS00001001486
ENST00000641149.1	ENA ID EGAS00001001486
ENST00000641149.1	alternative 5' UTR
ENST00000641527.1	ENA ID EGAS00001001486
ENST00000641857.1	ENA ID EGAS00001001486
ENST00000527084.5	alternative 5' UTR
ENST00000527541.5	alternative 5' UTR
ENST00000366491.6	alternative 5' UTR
ENST00000463359.5	QC splicing correct
ENST00000529512.5	alternative 5' UTR
ENST00000366488.5	LOC148823
ENST00000366488.5	MANE_select
ENST00000366487.4	ENA ID EGAS00001001486
ENST00000366487.4	alternative 5' UTR
ENST00000641802.1	ENA ID EGAS00001001486
ENST00000641802.1	NCBI GEO ID GSE80249
ENST00000420469.2	CAGE supported TSS
ENST00000320065.1	MANE_select
ENST00000320002.3	MANE_select
ENST00000641545.1	ENA ID EGAS00001001486
ENST00000655877.1	Assembled from SLRseq reads (SRP049776)
ENST00000668726.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659428.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659428.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000668652.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662798.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662484.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663177.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661089.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000642119.1	ENA ID EGAS00001001486
ENST00000642119.1	MANE_select
ENST00000641470.1	ENA ID EGAS00001001486
ENST00000641470.1	MANE_select
ENST00000641750.1	ENA ID EGAS00001001486
ENST00000641223.1	ENA ID EGAS00001001486
ENST00000641444.1	ENA ID EGAS00001001486
ENST00000641444.1	alternative 5' UTR
ENST00000642054.1	ENA ID EGAS00001001486
ENST00000283225.2	MANE_select
ENST00000641256.1	ENA ID EGAS00001001486
ENST00000641256.1	MANE_select
ENST00000641256.1	NCBI GEO ID GSE80249
ENST00000446393.2	dlogan
ENST00000446393.2	olender
ENST00000641506.1	ENA ID EGAS00001001486
ENST00000641506.1	NCBI GEO ID GSE80249
ENST00000641093.1	ENA ID EGAS00001001486
ENST00000641093.1	MANE_select
ENST00000355784.3	MANE_select
ENST00000366481.4	MANE_select
ENST00000360358.3	MANE_select
ENST00000641945.2	MANE_select
ENST00000318244.4	ENA ID EGAS00001001486
ENST00000318244.4	MANE_select
ENST00000623922.1	LOF variant in other haplotypes
ENST00000623922.1	MANE_select
ENST00000641567.1	ENA ID EGAS00001001486
ENST00000641567.1	NCBI GEO ID GSE80249
ENST00000355281.2	ENA ID EGAS00001001486
ENST00000355281.2	NCBI GEO ID GSE80249
ENST00000642011.1	ENA ID EGAS00001001486
ENST00000642011.1	alternative 5' UTR
ENST00000641771.1	ENA ID EGAS00001001486
ENST00000641771.1	MANE_select
ENST00000641771.1	alternative 5' UTR
ENST00000359959.4	MANE_select
ENST00000359959.4	NCBI GEO ID GSE80249
ENST00000359959.4	alternative 5' UTR
ENST00000641649.1	NCBI GEO ID GSE80249
ENST00000641649.1	alternative 5' UTR
ENST00000641161.1	ENA ID EGAS00001001486
ENST00000642003.1	ENA ID EGAS00001001486
ENST00000642003.1	NCBI GEO ID GSE80249
ENST00000358120.3	ENA ID EGAS00001001486
ENST00000641893.1	ENA ID EGAS00001001486
ENST00000641893.1	alternative 5' UTR
ENST00000641714.1	ENA ID EGAS00001001486
ENST00000641714.1	alternative 5' UTR
ENST00000366476.1	MANE_select
ENST00000641211.1	ENA ID EGAS00001001486
ENST00000641836.1	ENA ID EGAS00001001486
ENST00000641836.1	MANE_select
ENST00000641836.1	alternative 5' UTR
ENST00000641626.1	ENA ID EGAS00001001486
ENST00000641626.1	MANE_select
ENST00000641626.1	NCBI GEO ID GSE80249
ENST00000641868.1	ENA ID EGAS00001001486
ENST00000641868.1	MANE_select
ENST00000641220.1	ENA ID EGAS00001001486
ENST00000641220.1	MANE_select
ENST00000641220.1	NCBI GEO ID GSE80249
ENST00000641276.1	MANE_select
ENST00000641276.1	NCBI GEO ID GSE80249
ENST00000317965.3	MANE_select
ENST00000317861.1	MANE_select
ENST00000366475.1	BK004464
ENST00000366475.1	NP_001004696.1
ENST00000641644.1	ENA ID EGAS00001001486
ENST00000641644.1	MANE_select
ENST00000642005.1	BK004463
ENST00000642005.1	ENA ID EGAS00001001486
ENST00000641557.1	ENA ID EGAS00001001486
ENST00000641557.1	alternative 5' UTR
ENST00000641057.1	ENA ID EGAS00001001486
ENST00000642130.1	ENA ID EGAS00001001486
ENST00000641925.2	ENA ID EGAS00001001486
ENST00000359594.3	MANE_select
ENST00000641363.1	ENA ID EGAS00001001486
ENST00000641363.1	MANE_select
ENST00000641363.1	NCBI GEO ID GSE80249
ENST00000641804.1	ENA ID EGAS00001001486
ENST00000641804.1	MANE_select
ENST00000641501.1	ENA ID EGAS00001001486
ENST00000641501.1	alternative 5' UTR
ENST00000666951.1	Assembled from SLRseq reads (SRP049776)
ENST00000641069.1	ENA ID EGAS00001001486
ENST00000641069.1	MANE_select
ENST00000641069.1	NCBI GEO ID GSE80249
ENST00000328782.3	MANE_select
ENST00000642090.1	ENA ID EGAS00001001486
ENST00000642090.1	MANE_select
ENST00000641193.1	ENA ID EGAS00001001486
ENST00000641193.1	LOF variant in other haplotypes
ENST00000641193.1	MANE_select
ENST00000641268.1	ENA ID EGAS00001001486
ENST00000641268.1	MANE_select
ENST00000641268.1	NCBI GEO ID GSE80249
ENST00000651827.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000366472.6	KIAA1720
ENST00000366472.6	MANE_select
ENST00000306562.8	FLJ22301
ENST00000306562.8	MANE_select
ENST00000505503.5	alternative 5' UTR
ENST00000428515.5	alternative 5' UTR
ENST00000423362.1	alternative 5' UTR
ENST00000463519.5	FLJ20531
ENST00000306601.9	FLJ20531
ENST00000306601.9	MANE_select
ENST00000366471.7	FLJ20531
ENST00000451251.5	NP_001129508.1
ENST00000451251.5	non-canonical splice donor site between exons 6 and 7
ENST00000470787.6	non-canonical donor splice site exon 5
ENST00000496231.1	alternative 5' UTR
ENST00000329291.6	MANE_select
ENST00000327669.5	MANE_select
ENST00000653001.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665534.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000356150.10	MANE_select
ENST00000626873.2	non canonical TEC
ENST00000463865.5	FLJ22933
ENST00000403657.5	FLJ41835
ENST00000403657.5	alternative 5' UTR
ENST00000473104.5	QC splicing correct
ENST00000403658.5	FLJ78625
ENST00000479739.6	FLJ39121
ENST00000471948.5	FLJ31239
ENST00000488979.6	QC splicing correct
ENST00000475027.5	QC splicing correct
ENST00000402632.5	QC splicing correct
ENST00000272065.10	MANE_select
ENST00000403610.9	MANE_select
ENST00000654297.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668987.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670312.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666288.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666288.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000592090.1	non canonical TEC
ENST00000590678.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670259.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664423.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000586673.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670069.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000589124.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000591927.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663190.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656312.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662862.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656189.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657562.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657562.1	Assembled from RACEseq reads
ENST00000671362.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671362.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000671362.1	Assembled from SLRseq reads (SRP049776)
ENST00000656164.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668397.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000444079.1	not organism-supported
ENST00000654620.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000281017.8	MANE_select
ENST00000477202.1	FLJ43019
ENST00000668697.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670510.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000431542.1	QC splicing correct
ENST00000655805.1	Assembled from SLRseq reads (SRP049776)
ENST00000670082.1	Assembled from SLRseq reads (SRP049776)
ENST00000655894.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000648115.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000671221.1	Assembled from SLRseq reads (SRP049776)
ENST00000662432.1	Assembled from SLRseq reads (SRP049776)
ENST00000659656.1	Assembled from SLRseq reads (SRP049776)
ENST00000663151.1	Assembled from SLRseq reads (SRP049776)
ENST00000445279.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449405.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000308624.10	MANE_select
ENST00000308624.10	NP_061841
ENST00000329066.9	LR annotation
ENST00000329066.9	MANE_select
ENST00000423320.5	alternative 5' UTR
ENST00000479902.1	QC splicing correct
ENST00000366424.2	FLJ26070
ENST00000252804.9	MANE_select
ENST00000647755.1	NP_001316775.1
ENST00000647738.2	MANE_select
ENST00000407844.6	CAGE supported TSS
ENST00000399161.7	alternative 5' UTR
ENST00000648339.1	alternative 5' UTR
ENST00000648318.1	NP_001316781.1
ENST00000650560.1	NAGNAG splice site
ENST00000649207.1	alternative 5' UTR
ENST00000647694.1	alternative 5' UTR
ENST00000649663.1	NP_001316780.1
ENST00000428368.7	alternative 5' UTR
ENST00000648316.1	alternative 5' UTR
ENST00000648665.1	NP_001316778.1
ENST00000399157.7	CAGE supported TSS
ENST00000650589.1	CAGE supported TSS
ENST00000650589.1	alternative 5' UTR
ENST00000471668.1	CAGE supported TSS
ENST00000648366.1	CAGE supported TSS
ENST00000647848.1	CAGE supported TSS
ENST00000470954.2	QC splicing correct
ENST00000649641.1	alternative 5' UTR
ENST00000649709.1	alternative 5' UTR
ENST00000649313.1	alternative 5' UTR
ENST00000426976.1	DKFZp686N1215
ENST00000655823.1	Assembled from SLRseq reads (SRP049776)
ENST00000658302.1	Assembled from SLRseq reads (SRP049776)
ENST00000652954.1	Assembled from SLRseq reads (SRP049776)
ENST00000660883.1	Assembled from SLRseq reads (SRP049776)
ENST00000671195.1	Assembled from SLRseq reads (SRP049776)
ENST00000452701.2	Assembled from SLRseq reads (SRP049776)
ENST00000663497.1	Assembled from SLRseq reads (SRP049776)
ENST00000663614.1	Assembled from SLRseq reads (SRP049776)
ENST00000664836.1	Assembled from SLRseq reads (SRP049776)
ENST00000437610.1	GENCODE experimental pipeline
ENST00000457478.1	GENCODE experimental pipeline
ENST00000667683.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425776.1	QC splicing correct
ENST00000382125.9	MANE_select
ENST00000454977.1	GENCODE experimental pipeline
ENST00000324266.10	MANE_select
ENST00000324266.10	alternative 5' UTR
ENST00000417243.5	QC splicing correct
ENST00000433382.5	QC splicing correct
ENST00000327435.11	MANE_select
ENST00000450917.1	GENCODE experimental pipeline
ENST00000315212.4	MANE_select
ENST00000436842.5	FLJ39594
ENST00000664922.1	Assembled from SLRseq reads (SRP049776)
ENST00000664922.1	FLJ12956
ENST00000438436.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656939.1	Assembled from SLRseq reads (SRP049776)
ENST00000671571.1	Assembled from SLRseq reads (SRP049776)
ENST00000645674.2	CAGE supported TSS
ENST00000645674.2	LR annotation
ENST00000645674.2	MANE_select
ENST00000646909.1	alternative 5' UTR
ENST00000462576.5	alternative 5' UTR
ENST00000403564.5	alternative 5' UTR
ENST00000406376.1	alternative 5' UTR
ENST00000349077.9	MANE_select
ENST00000456450.1	GENCODE experimental pipeline
ENST00000252505.4	MANE_select
ENST00000399143.9	MANE_select
ENST00000537457.1	not organism-supported
ENST00000592948.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000590981.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665736.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671382.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664559.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664559.1	Assembled from RACEseq reads
ENST00000586530.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668043.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659848.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656255.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000588264.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000588796.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000453880.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425949.5	GENCODE experimental pipeline
ENST00000666829.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659600.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659923.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667525.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669961.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000442831.1	GENCODE experimental pipeline
ENST00000412134.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000412134.6	GENCODE experimental pipeline
ENST00000421212.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000421212.2	Assembled from SLRseq reads (SRP049776)
ENST00000659398.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000458264.1	GENCODE experimental pipeline
ENST00000453678.5	GENCODE experimental pipeline
ENST00000322002.5	MANE_select
ENST00000455579.2	GENCODE experimental pipeline
ENST00000659527.1	Assembled from SLRseq reads (SRP049776)
ENST00000655406.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662285.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659164.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659164.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000659164.1	Assembled from SLRseq reads (SRP049776)
ENST00000659985.1	Assembled from SLRseq reads (SRP049776)
ENST00000666985.1	Assembled from SLRseq reads (SRP049776)
ENST00000654655.1	Assembled from SLRseq reads (SRP049776)
ENST00000665307.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665307.1	Assembled from SLRseq reads (SRP049776)
ENST00000431182.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000431182.2	Assembled from SLRseq reads (SRP049776)
ENST00000670048.1	Assembled from SLRseq reads (SRP049776)
ENST00000654025.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654025.1	Assembled from SLRseq reads (SRP049776)
ENST00000668005.1	Assembled from SLRseq reads (SRP049776)
ENST00000664766.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669975.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663649.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661262.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668795.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670914.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654672.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658702.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658702.1	Assembled from SLRseq reads (SRP049776)
ENST00000431188.1	GENCODE experimental pipeline
ENST00000670925.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663243.1	Assembled from SLRseq reads (SRP049776)
ENST00000670583.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670583.1	Assembled from SLRseq reads (SRP049776)
ENST00000669751.1	Assembled from SLRseq reads (SRP049776)
ENST00000664097.1	Assembled from SLRseq reads (SRP049776)
ENST00000665790.1	Assembled from SLRseq reads (SRP049776)
ENST00000667433.1	Assembled from SLRseq reads (SRP049776)
ENST00000670820.1	Assembled from SLRseq reads (SRP049776)
ENST00000654857.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660066.1	Assembled from SLRseq reads (SRP049776)
ENST00000444416.1	FLJ41046
ENST00000660326.1	Assembled from SLRseq reads (SRP049776)
ENST00000648803.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000650957.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650957.2	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000660708.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425125.1	GENCODE experimental pipeline
ENST00000663983.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661143.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436082.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436082.2	GENCODE experimental pipeline
ENST00000668317.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660485.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666575.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663577.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654332.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667111.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658799.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663783.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663783.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000590865.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000455317.5	GENCODE experimental pipeline
ENST00000585781.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000591129.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000585718.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000592365.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000587628.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656553.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000628355.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000592229.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652808.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669249.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663445.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000431336.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660382.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654690.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000450467.1	GENCODE experimental pipeline
ENST00000666684.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671297.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000382045.3	FLJ42418
ENST00000662953.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000366140.6	GENCODE experimental pipeline
ENST00000256722.10	MANE_select
ENST00000382040.4	MANE_select
ENST00000654458.1	Assembled from SLRseq reads (SRP049776)
ENST00000656329.1	Assembled from SLRseq reads (SRP049776)
ENST00000659594.1	Assembled from SLRseq reads (SRP049776)
ENST00000660837.1	Assembled from SLRseq reads (SRP049776)
ENST00000653376.1	Assembled from SLRseq reads (SRP049776)
ENST00000669858.1	Assembled from SLRseq reads (SRP049776)
ENST00000668478.1	Assembled from SLRseq reads (SRP049776)
ENST00000666343.1	Assembled from SLRseq reads (SRP049776)
ENST00000666155.1	Assembled from SLRseq reads (SRP049776)
ENST00000655735.1	Assembled from SLRseq reads (SRP049776)
ENST00000668217.1	Assembled from SLRseq reads (SRP049776)
ENST00000654416.1	Assembled from SLRseq reads (SRP049776)
ENST00000661352.1	Assembled from SLRseq reads (SRP049776)
ENST00000663387.1	Assembled from SLRseq reads (SRP049776)
ENST00000668067.1	Assembled from SLRseq reads (SRP049776)
ENST00000657786.1	Assembled from SLRseq reads (SRP049776)
ENST00000660102.1	Assembled from SLRseq reads (SRP049776)
ENST00000671313.1	Assembled from SLRseq reads (SRP049776)
ENST00000670983.1	Assembled from SLRseq reads (SRP049776)
ENST00000661763.1	Assembled from SLRseq reads (SRP049776)
ENST00000424351.1	FLJ32573
ENST00000437589.3	Assembled from SLRseq reads (SRP049776)
ENST00000655757.1	Assembled from SLRseq reads (SRP049776)
ENST00000655156.1	Assembled from SLRseq reads (SRP049776)
ENST00000439208.1	GENCODE experimental pipeline
ENST00000320892.11	MANE_select
ENST00000416587.5	alternative 5' UTR
ENST00000433456.1	alternative 5' UTR
ENST00000664324.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649356.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000649356.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000415520.5	GENCODE experimental pipeline
ENST00000654090.1	Assembled from SLRseq reads (SRP049776)
ENST00000662573.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657444.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000444955.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660940.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656550.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000450695.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657879.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657879.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000671492.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665396.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658285.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658955.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658275.1	Assembled from SLRseq reads (SRP049776)
ENST00000664007.1	Assembled from SLRseq reads (SRP049776)
ENST00000414654.1	GENCODE experimental pipeline
ENST00000417930.1	GENCODE experimental pipeline
ENST00000416534.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000416534.6	GENCODE experimental pipeline
ENST00000661927.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657636.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000416607.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426969.5	GENCODE experimental pipeline
ENST00000663636.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664226.1	Assembled from SLRseq reads (SRP049776)
ENST00000655474.1	Assembled from SLRseq reads (SRP049776)
ENST00000667380.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658862.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665772.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655006.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657310.1	Assembled from SLRseq reads (SRP049776)
ENST00000654099.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664004.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662336.1	Assembled from SLRseq reads (SRP049776)
ENST00000668369.1	Assembled from SLRseq reads (SRP049776)
ENST00000666457.1	Assembled from SLRseq reads (SRP049776)
ENST00000669954.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668575.1	Assembled from SLRseq reads (SRP049776)
ENST00000655671.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000661371.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000657091.1	Assembled from SLRseq reads (SRP049776)
ENST00000664728.1	Assembled from SLRseq reads (SRP049776)
ENST00000663038.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661966.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659736.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000650800.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000650800.2	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000670008.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000650238.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650238.2	Assembled from PacBio Capture-seq reads
ENST00000648035.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000436187.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664719.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660229.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655346.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662379.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670389.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000649387.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000412712.1	GENCODE experimental pipeline
ENST00000665989.1	Assembled from SLRseq reads (SRP049776)
ENST00000455965.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000455965.6	Assembled from SLRseq reads (SRP049776)
ENST00000661063.1	Assembled from SLRseq reads (SRP049776)
ENST00000453900.2	Assembled from SLRseq reads (SRP049776)
ENST00000656008.1	Assembled from SLRseq reads (SRP049776)
ENST00000669696.1	Assembled from SLRseq reads (SRP049776)
ENST00000433592.1	not organism-supported
ENST00000418957.1	not organism-supported
ENST00000396290.2	MANE_select
ENST00000396290.2	genebuild_only_MANE
ENST00000256707.8	MANE_select
ENST00000305997.8	MANE_select
ENST00000495580.1	GENCODE experimental pipeline
ENST00000492300.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655626.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000474561.1	GENCODE experimental pipeline
ENST00000281419.8	MANE_select
ENST00000360635.7	alternative 5' UTR
ENST00000355346.9	MANE_select
ENST00000359712.7	FLJ35860
ENST00000492079.5	alternative 5' UTR
ENST00000494563.5	alternative 5' UTR
ENST00000467606.5	alternative 5' UTR
ENST00000484735.5	alternative 5' UTR
ENST00000460001.5	alternative 5' UTR
ENST00000497105.1	alternative 5' UTR
ENST00000238112.8	MANE_select
ENST00000470914.5	alternative 5' UTR
ENST00000497473.6	MANE_select
ENST00000481367.5	alternative 5' UTR
ENST00000495797.1	alternative 5' UTR
ENST00000310823.8	CAGE supported TSS
ENST00000310823.8	LR annotation
ENST00000310823.8	MANE_select
ENST00000618923.2	non canonical other
ENST00000472619.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000238081.8	MANE_select
ENST00000381844.8	alternative 5' UTR
ENST00000446619.1	alternative 5' UTR
ENST00000665437.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663385.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667551.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669600.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000478468.1	GENCODE experimental pipeline
ENST00000655108.1	Assembled from SLRseq reads (SRP049776)
ENST00000663514.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667680.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000483023.1	GENCODE experimental pipeline
ENST00000659839.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000474667.1	GENCODE experimental pipeline
ENST00000263663.10	MANE_select
ENST00000654664.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000324907.14	MANE_select
ENST00000305883.6	MANE_select
ENST00000425235.1	GENCODE experimental pipeline
ENST00000641198.1	CAGE supported TSS
ENST00000360566.6	PMID:11978970 also provides evidence for an upstream promoter
ENST00000304567.10	CAGE supported TSS
ENST00000304567.10	MANE_select
ENST00000304567.10	There is evidence for a downstream promoter from PMIDs 10631117 and 11978970
ENST00000649516.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000307845.8	MANE_select
ENST00000234111.9	MANE_select
ENST00000446285.5	probable_NMD_if_extended
ENST00000667698.1	Assembled from SLRseq reads (SRP049776)
ENST00000670859.1	Assembled from SLRseq reads (SRP049776)
ENST00000381685.10	MANE_select
ENST00000414538.1	GENCODE experimental pipeline
ENST00000452909.1	GENCODE experimental pipeline
ENST00000648362.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648362.1	alternative 5' UTR
ENST00000272238.9	MANE_select
ENST00000272227.8	MANE_select
ENST00000670239.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652896.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418835.1	GENCODE experimental pipeline
ENST00000295082.3	MANE_select
ENST00000658220.1	Assembled from SLRseq reads (SRP049776)
ENST00000660479.1	Assembled from SLRseq reads (SRP049776)
ENST00000590207.2	Assembled from SLRseq reads (SRP049776)
ENST00000670240.1	Assembled from SLRseq reads (SRP049776)
ENST00000381585.8	FLJ25143
ENST00000381585.8	MANE_select
ENST00000295083.8	MANE_select
ENST00000315872.11	MANE_select
ENST00000430897.1	GENCODE experimental pipeline
ENST00000666797.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661605.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668851.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670478.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417473.6	GENCODE experimental pipeline
ENST00000432665.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658552.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000454489.1	GENCODE experimental pipeline
ENST00000656821.1	Assembled from SLRseq reads (SRP049776)
ENST00000670708.1	Assembled from SLRseq reads (SRP049776)
ENST00000655171.1	Assembled from SLRseq reads (SRP049776)
ENST00000663962.1	Assembled from SLRseq reads (SRP049776)
ENST00000649977.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000381525.8	MANE_select
ENST00000381486.7	MANE_select
ENST00000381486.7	NP_055483
ENST00000263834.9	NP_683701.2
ENST00000389825.7	GREB1
ENST00000381483.6	NP_149081.1
ENST00000470980.1	GREB1
ENST00000432985.1	GREB1
ENST00000396123.2	GREB1
ENST00000306928.6	MANE_select
ENST00000396099.5	NAGNAG splice site
ENST00000674199.1	MANE_select
ENST00000441684.5	alternative 5' UTR
ENST00000423495.1	alternative 5' UTR
ENST00000435175.1	GENCODE experimental pipeline
ENST00000431500.2	GENCODE experimental pipeline
ENST00000429878.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665111.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449986.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653212.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665021.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653433.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664018.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664018.1	GENCODE experimental pipeline
ENST00000412606.2	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000653484.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667283.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654108.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657078.1	Assembled from SLRseq reads (SRP049776)
ENST00000663507.1	Assembled from SLRseq reads (SRP049776)
ENST00000664540.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655303.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655303.1	Assembled from SLRseq reads (SRP049776)
ENST00000662367.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000662367.1	Assembled from SLRseq reads (SRP049776)
ENST00000658136.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664170.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653005.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000425974.5	GENCODE experimental pipeline
ENST00000662366.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659947.1	Assembled from SLRseq reads (SRP049776)
ENST00000665067.1	Assembled from SLRseq reads (SRP049776)
ENST00000661564.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000414661.2	Assembled from SLRseq reads (SRP049776)
ENST00000647894.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000434509.1	GENCODE experimental pipeline
ENST00000450715.5	GENCODE experimental pipeline
ENST00000295092.3	MANE_select
ENST00000654007.1	Assembled from SLRseq reads (SRP049776)
ENST00000416173.1	GENCODE experimental pipeline
ENST00000281513.10	MANE_select
ENST00000438178.1	GENCODE experimental pipeline
ENST00000434671.2	long_read_pipeline_2
ENST00000678755.1	align_id:3642582|asmbl_132747
ENST00000676759.1	align_id:3642585|asmbl_132750
ENST00000478695.2	align_id:3642584|asmbl_132749
ENST00000678786.1	align_id:3642587|asmbl_132752
ENST00000678536.1	align_id:3642579|asmbl_132744
ENST00000679227.1	align_id:3642576|asmbl_132741
ENST00000676916.1	align_id:3642569|asmbl_132734
ENST00000617198.5	align_id:3642572|asmbl_132737
ENST00000459706.2	align_id:3642595|asmbl_132760
ENST00000233084.8	MANE_select
ENST00000233084.8	genebuild_only_MANE
ENST00000678137.1	long_read_pipeline_2
ENST00000677355.1	align_id:3642598|asmbl_132763
ENST00000470674.2	align_id:3642593|asmbl_132758
ENST00000676635.1	align_id:3642594|asmbl_132759
ENST00000621973.2	long_read_pipeline_2
ENST00000677649.1	long_read_pipeline_2
ENST00000431117.1	GENCODE experimental pipeline
ENST00000492352.5	GENCODE experimental pipeline
ENST00000448379.1	GENCODE experimental pipeline
ENST00000641950.2	Assembled from SLRseq reads (SRP049776)
ENST00000281043.4	MANE_select
ENST00000638417.1	NP_001280160.1
ENST00000422415.2	GENCODE experimental pipeline
ENST00000426539.1	GENCODE experimental pipeline
ENST00000667080.1	Assembled from RACEseq reads
ENST00000412381.5	GENCODE experimental pipeline
ENST00000444804.1	non canonical TEC
ENST00000420404.2	GENCODE experimental pipeline
ENST00000649462.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000661862.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655060.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656503.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666711.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439745.1	GENCODE experimental pipeline
ENST00000420130.1	GENCODE experimental pipeline
ENST00000427950.1	GENCODE experimental pipeline
ENST00000446357.1	GENCODE experimental pipeline
ENST00000443066.2	QC splicing correct
ENST00000648675.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000667231.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000381323.7	MANE_select
ENST00000448650.1	GENCODE experimental pipeline
ENST00000669222.1	Assembled from SLRseq reads (SRP049776)
ENST00000421181.1	GENCODE experimental pipeline
ENST00000404666.6	non canonical TEC
ENST00000295156.9	MANE_select
ENST00000406397.1	not organism-supported
ENST00000448223.7	MANE_select
ENST00000381254.7	MANE_select
ENST00000381254.7	genebuild_only_MANE
ENST00000524465.5	alternative 5' UTR
ENST00000532257.1	alternative 5' UTR
ENST00000281047.4	MANE_select
ENST00000403915.5	alternative 5' UTR
ENST00000304101.9	MANE_select
ENST00000419802.1	alternative 5' UTR
ENST00000670548.1	Assembled from RACEseq reads
ENST00000668609.1	Assembled from SLRseq reads (SRP049776)
ENST00000381249.4	MANE_select
ENST00000406971.6	non canonical TEC
ENST00000431697.1	GENCODE experimental pipeline
ENST00000657170.1	Assembled from SLRseq reads (SRP049776)
ENST00000650025.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000449124.1	GENCODE experimental pipeline
ENST00000272223.3	MANE_select
ENST00000443897.1	GENCODE experimental pipeline
ENST00000656739.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000450628.2	GENCODE experimental pipeline
ENST00000670653.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657829.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666694.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669699.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659488.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654520.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663794.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432822.1	GENCODE experimental pipeline
ENST00000433669.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449086.5	GENCODE experimental pipeline
ENST00000649549.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000654739.1	Assembled from RACEseq reads
ENST00000653306.1	Assembled from RACEseq reads
ENST00000662620.1	Assembled from RACEseq reads
ENST00000655598.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000333610.4	MANE_select
ENST00000402414.1	not organism-supported
ENST00000281405.9	MANE_select
ENST00000658200.1	Assembled from SLRseq reads (SRP049776)
ENST00000416575.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000416575.2	GENCODE experimental pipeline
ENST00000407540.8	MANE_select
ENST00000175091.5	MANE_select
ENST00000430429.1	GENCODE experimental pipeline
ENST00000254351.9	MANE_select
ENST00000361078.7	MANE_select
ENST00000420234.5	probable_NMD_if_extended
ENST00000424028.1	NP_001033749
ENST00000272233.6	MANE_select
ENST00000448241.1	GENCODE experimental pipeline
ENST00000441870.1	GENCODE experimental pipeline
ENST00000304031.8	MANE_select
ENST00000272224.5	MANE_select
ENST00000237822.8	MANE_select
ENST00000447260.1	GENCODE experimental pipeline
ENST00000233242.5	CAGE supported TSS
ENST00000233242.5	LR annotation
ENST00000233242.5	MANE_select
ENST00000662206.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000405799.3	MANE_select
ENST00000670105.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000457901.1	GENCODE experimental pipeline
ENST00000653699.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649482.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000664233.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667904.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417609.1	GENCODE experimental pipeline
ENST00000648747.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000458359.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000416032.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667311.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653083.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000412424.1	GENCODE experimental pipeline
ENST00000654277.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671687.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668104.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663972.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664721.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668119.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669355.1	Assembled from SLRseq reads (SRP049776)
ENST00000650514.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000450551.1	GENCODE experimental pipeline
ENST00000430520.2	GENCODE experimental pipeline
ENST00000662115.1	Assembled from SLRseq reads (SRP049776)
ENST00000669301.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654338.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657386.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669816.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665651.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654407.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670184.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000433429.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000433429.2	GENCODE experimental pipeline
ENST00000671077.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653854.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655510.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669447.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440785.1	GENCODE experimental pipeline
ENST00000423706.1	GENCODE experimental pipeline
ENST00000423706.1	non canonical conserved
ENST00000415245.1	GENCODE experimental pipeline
ENST00000430051.1	GENCODE experimental pipeline
ENST00000486442.6	MANE_select
ENST00000430988.1	GENCODE experimental pipeline
ENST00000655321.1	Assembled from SLRseq reads (SRP049776)
ENST00000238789.10	MANE_select
ENST00000309033.5	MANE_select
ENST00000406420.7	LOC388931
ENST00000338315.6	MANE_select
ENST00000295148.9	MANE_select
ENST00000380986.9	MANE_select
ENST00000233468.5	MANE_select
ENST00000478050.1	GENCODE experimental pipeline
ENST00000460686.1	not organism-supported
ENST00000615575.5	MANE_select
ENST00000238721.9	MANE_select
ENST00000417886.1	Probable_NMD_if_extended
ENST00000313213.5	MANE_select
ENST00000648005.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000428344.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000295150.8	MANE_select
ENST00000295150.8	NP_001035800.1
ENST00000432434.1	not organism-supported
ENST00000429717.1	GENCODE experimental pipeline
ENST00000355123.9	MANE_select
ENST00000662667.1	Assembled from SLRseq reads (SRP049776)
ENST00000413989.5	GENCODE experimental pipeline
ENST00000666971.1	Assembled from SLRseq reads (SRP049776)
ENST00000496333.5	alternative 5' UTR
ENST00000406961.5	NP_003734.3
ENST00000469850.5	alternative 5' UTR
ENST00000328379.6	MANE_select
ENST00000328379.6	NP_001013685
ENST00000380834.7	MANE_select
ENST00000486527.6	QC splicing correct
ENST00000679454.1	CAGE supported TSS
ENST00000679454.1	MANE_select
ENST00000438445.1	alternative 5' UTR
ENST00000264711.7	MANE_select
ENST00000264711.7	NP_057628
ENST00000421904.5	GENCODE experimental pipeline
ENST00000434897.2	Assembled from SLRseq reads (SRP049776)
ENST00000668034.1	Assembled from SLRseq reads (SRP049776)
ENST00000653368.1	Assembled from SLRseq reads (SRP049776)
ENST00000657294.1	Assembled from SLRseq reads (SRP049776)
ENST00000663498.1	Assembled from SLRseq reads (SRP049776)
ENST00000445389.6	Assembled from SLRseq reads (SRP049776)
ENST00000671429.1	Assembled from SLRseq reads (SRP049776)
ENST00000403714.8	MANE_select
ENST00000395826.7	MANE_select
ENST00000395826.7	alternative 5' UTR
ENST00000264708.7	alternative 5' UTR
ENST00000449220.1	NP_001030333.1
ENST00000449220.1	alternative 5' UTR
ENST00000321117.10	MANE_select
ENST00000321117.10	NP_072046.2
ENST00000321117.10	alternative 5' UTR
ENST00000380746.8	NP_715640.2
ENST00000406659.3	NP_783329.1
ENST00000313031.2	confirm experimentally
ENST00000431557.1	GENCODE experimental pipeline
ENST00000495466.6	align_id:3643141|asmbl_133306
ENST00000404103.7	NP_149159
ENST00000405222.5	NP_899205
ENST00000406818.7	NP_068707
ENST00000407038.7	NP_149160
ENST00000407661.7	NP_899204
ENST00000288642.12	align_id:3643124|asmbl_133289
ENST00000303659.8	alternative 5' UTR
ENST00000349996.6	alternative 5' UTR
ENST00000352271.6	GENCODE experimental pipeline
ENST00000435504.9	CAGE supported TSS
ENST00000435504.9	LR annotation
ENST00000435504.9	MANE_select
ENST00000435504.9	NP_060733.4
ENST00000673455.1	CAGE supported TSS
ENST00000497092.1	CAGE supported TSS
ENST00000264712.8	MANE_select
ENST00000405914.1	alternative 5' UTR
ENST00000264710.5	MANE_select
ENST00000401533.7	KIAA2038
ENST00000401533.7	MANE_select
ENST00000407684.1	FLJ00375
ENST00000380649.8	MANE_select
ENST00000646483.1	253475
ENST00000646483.1	263784
ENST00000448743.5	alternative 5' UTR
ENST00000317799.10	MANE_select
ENST00000425035.5	alternative 5' UTR
ENST00000412805.5	alternative 5' UTR
ENST00000494615.1	FLJ37959
ENST00000653720.1	Assembled from SLRseq reads (SRP049776)
ENST00000661577.1	Assembled from SLRseq reads (SRP049776)
ENST00000260585.12	MANE_select
ENST00000288710.7	MANE_select
ENST00000421869.5	FLJ97042
ENST00000649059.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000402415.8	upstream ATG
ENST00000272371.7	MANE_select
ENST00000329615.4	MANE_select
ENST00000288861.5	MANE_select
ENST00000420852.1	GENCODE experimental pipeline
ENST00000302909.4	MANE_select
ENST00000429494.5	DKFZp686J0896
ENST00000344420.10	MANE_select
ENST00000414029.1	DKFZp686N0996
ENST00000335756.9	MANE_select
ENST00000450961.5	alternative 5' UTR
ENST00000288699.11	MANE_select
ENST00000401478.5	alternative 5' UTR
ENST00000431402.5	alternative 5' UTR
ENST00000434719.1	alternative 5' UTR
ENST00000484882.1	FLJ45383
ENST00000233121.7	MANE_select
ENST00000491354.5	QC splicing correct
ENST00000648289.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000648289.1	alternative 5' UTR
ENST00000648289.1	upstream ATG
ENST00000458529.5	alternative 5' UTR
ENST00000402218.1	alternative 5' UTR
ENST00000380387.3	FLJ43781
ENST00000380387.3	GENCODE experimental pipeline
ENST00000435172.6	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000321326.11	FLJ20254
ENST00000238788.14	DKFZp666E065, FLJ90500
ENST00000238788.14	MANE_select
ENST00000460665.1	FLJ39682
ENST00000421915.5	alternative 5' UTR
ENST00000453161.5	FLJ21839
ENST00000453161.5	alternative 5' UTR
ENST00000451003.5	alternative 5' UTR
ENST00000477136.5	FLJ13336
ENST00000360131.5	MANE_select
ENST00000323064.12	FLJ21839
ENST00000437006.1	alternative 5' UTR
ENST00000411862.1	GENCODE experimental pipeline
ENST00000447619.5	alternative 3' UTR
ENST00000456793.2	MANE_select
ENST00000429985.1	alternative 5' UTR
ENST00000380320.9	MANE_select
ENST00000260598.10	MANE_select
ENST00000402394.6	MANE_select
ENST00000402394.6	owing to a polymorphic repeat in the last exon, this translation is longer than the published one
ENST00000405600.5	alternative 5' UTR
ENST00000312734.8	alternative 5' UTR
ENST00000404694.3	FLJ99188
ENST00000316470.9	MANE_select
ENST00000260643.7	MANE_select
ENST00000416802.1	Probable_NMD_if_extended
ENST00000335524.7	MANE_select
ENST00000296096.6	MANE_select
ENST00000461757.1	DKFZp434F152
ENST00000310574.8	MANE_select
ENST00000488743.6	FLJ14949
ENST00000408041.5	FLJ95369
ENST00000408041.5	alternative 5' UTR
ENST00000412471.5	alternative 5' UTR
ENST00000401463.5	alternative 5' UTR
ENST00000432106.5	alternative 5' UTR
ENST00000426119.5	alternative 5' UTR
ENST00000414408.5	alternative 5' UTR
ENST00000428518.5	alternative 5' UTR
ENST00000442731.1	alternative 5' UTR
ENST00000380171.8	upstream ATG
ENST00000405489.7	FLJ75748
ENST00000264705.9	MANE_select
ENST00000497341.5	FLJ45367
ENST00000233535.9	MANE_select
ENST00000482990.1	FLJ45153
ENST00000296097.8	MANE_select
ENST00000402462.5	alternative 5' UTR
ENST00000406962.1	not organism-supported
ENST00000380075.7	MANE_select
ENST00000296099.2	MANE_select
ENST00000380044.6	MANE_select
ENST00000357186.10	FLJ35986
ENST00000454704.5	FLJ97604
ENST00000415683.2	non canonical TEC
ENST00000457748.1	alternative 5' UTR
ENST00000423998.1	alternative 5' UTR
ENST00000655380.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000662609.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000585645.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000416453.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000416453.7	FLJ25849
ENST00000590383.4	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000447070.1	GENCODE experimental pipeline
ENST00000347454.9	MANE_select
ENST00000233575.7	MANE_select
ENST00000323703.11	MANE_select
ENST00000491924.1	not organism-supported
ENST00000344034.5	MANE_select
ENST00000379852.8	MANE_select
ENST00000379852.8	alternative 5' UTR
ENST00000419281.6	alternative 5' UTR
ENST00000356442.4	alternative 5' UTR
ENST00000288873.7	MANE_select
ENST00000453171.5	NAGNAG splice site
ENST00000407293.5	NAGNAG splice site
ENST00000260570.8	DKFZp434A163
ENST00000260570.8	MANE_select
ENST00000264703.4	MANE_select
ENST00000264717.7	MANE_select
ENST00000447166.2	GENCODE experimental pipeline
ENST00000355467.6	MANE_select
ENST00000324364.4	MANE_select
ENST00000394775.3	NP_001136155
ENST00000515877.5	QC splicing correct
ENST00000503738.5	QC splicing correct
ENST00000610189.2	CAGE supported TSS
ENST00000610189.2	MANE_select
ENST00000337768.10	MANE_select
ENST00000464789.2	not organism-supported
ENST00000618046.4	CAGE supported TSS
ENST00000379677.2	GENCODE experimental pipeline
ENST00000296102.8	MANE_select
ENST00000302188.8	MANE_select
ENST00000379624.6	MANE_select
ENST00000661521.1	Assembled from SLRseq reads (SRP049776)
ENST00000418963.2	Assembled from SLRseq reads (SRP049776)
ENST00000418963.2	GENCODE experimental pipeline
ENST00000657678.1	Assembled from SLRseq reads (SRP049776)
ENST00000445878.1	non canonical polymorphism
ENST00000264716.9	MANE_select
ENST00000439700.1	GENCODE experimental pipeline
ENST00000327757.10	MANE_select
ENST00000431376.1	GENCODE experimental pipeline
ENST00000663311.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659356.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668960.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000428036.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452212.1	GENCODE experimental pipeline
ENST00000666397.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669783.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665023.1	Assembled from SLRseq reads (SRP049776)
ENST00000444501.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659984.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658445.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653462.1	Assembled from SLRseq reads (SRP049776)
ENST00000662538.1	Assembled from SLRseq reads (SRP049776)
ENST00000395366.3	MANE_select
ENST00000462832.5	FLJ35928
ENST00000334056.10	MANE_select
ENST00000449210.1	alternative 5' UTR
ENST00000306108.10	DKFZp564I2178
ENST00000306108.10	FLJ20628
ENST00000306108.10	MANE_select
ENST00000407426.8	MANE_select
ENST00000379558.5	LOC165186 similar to RIKEN cDNA 4632412N22 gene
ENST00000379558.5	MANE_select
ENST00000465300.5	FLJ43249
ENST00000331664.6	MANE_select
ENST00000662150.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000446073.1	GENCODE experimental pipeline
ENST00000320081.10	MANE_select
ENST00000389048.8	MANE_select
ENST00000638605.1	Transcript variant based on PPFIBP1-ALK fusion mRNAs from inflammatory myofibroblastic tumor (PPFIBP1 gene is in Chr 12 clone AC009509.7)
ENST00000655343.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669284.1	Assembled from SLRseq reads (SRP049776)
ENST00000421411.1	GENCODE experimental pipeline
ENST00000359823.2	GENCODE experimental pipeline
ENST00000453606.5	QC splicing correct
ENST00000379520.7	alternative 5' UTR
ENST00000379519.7	alternative 5' UTR
ENST00000261353.9	MANE_select
ENST00000402003.7	alternative 5' UTR
ENST00000402708.5	alternative 5' UTR
ENST00000395323.9	Extended 5' end from assembled from SLRseq reads (ENA:SRP049776)
ENST00000395323.9	MANE_select
ENST00000671342.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670470.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666899.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660932.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671597.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000379509.8	MANE_select
ENST00000497423.1	alternative 5' UTR
ENST00000295055.12	MANE_select
ENST00000458085.6	QC splicing correct
ENST00000465450.2	QC splicing correct
ENST00000649302.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000324589.9	FLJ12691
ENST00000349752.10	FLJ23814
ENST00000349752.10	FLJ33994
ENST00000349752.10	MANE_select
ENST00000406653.5	FLJ16272
ENST00000430167.1	FLJ13977
ENST00000449780.1	GENCODE experimental pipeline
ENST00000403897.4	MANE_select
ENST00000322054.10	MANE_select
ENST00000379416.4	MANE_select
ENST00000622030.2	MANE_select
ENST00000435713.1	GENCODE experimental pipeline
ENST00000416279.1	GENCODE experimental pipeline
ENST00000404530.6	MANE_select
ENST00000404530.6	alternative 5' UTR
ENST00000422936.5	NMD likely if extended
ENST00000413686.1	NMD likely if extended
ENST00000437854.1	alternative 5' UTR
ENST00000446765.5	NMD likely if extended
ENST00000452582.5	NMD likely if extended
ENST00000414013.5	NMD likely if extended
ENST00000430665.5	NMD likely if extended
ENST00000422413.1	NMD likely if extended
ENST00000342166.10	MANE_select
ENST00000295066.3	alternative 5' UTR
ENST00000315285.9	CAGE supported TSS
ENST00000315285.9	MANE_select
ENST00000621856.2	NAGNAG splice site
ENST00000642455.1	NAGNAG splice site
ENST00000642999.1	CAGE supported TSS
ENST00000644954.1	CAGE supported TSS
ENST00000647007.1	NAGNAG splice site
ENST00000282587.9	MANE_select
ENST00000402280.6	CAGE supported TSS
ENST00000402280.6	MANE_select
ENST00000402280.6	alternative 5' UTR
ENST00000360906.9	alternative 5' UTR
ENST00000238831.9	MANE_select
ENST00000421745.6	NP_057336
ENST00000648282.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000317907.9	MANE_select
ENST00000647819.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648808.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000648808.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000663772.1	Assembled from SLRseq reads (SRP049776)
ENST00000657199.1	Assembled from SLRseq reads (SRP049776)
ENST00000654101.1	Assembled from SLRseq reads (SRP049776)
ENST00000414054.5	GENCODE experimental pipeline
ENST00000663645.1	Assembled from SLRseq reads (SRP049776)
ENST00000663506.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660594.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660594.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000659406.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659655.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000440786.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655718.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655718.1	GENCODE experimental pipeline
ENST00000666737.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654895.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666151.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671158.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432635.1	not organism-supported
ENST00000468091.2	non_canonical splice donor at exon 4
ENST00000650179.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000437184.5	alternative 5' UTR
ENST00000425210.5	alternative 5' UTR
ENST00000444784.5	alternative 5' UTR
ENST00000423159.5	alternative 5' UTR
ENST00000403687.8	MANE_select
ENST00000403687.8	alternative 5' UTR
ENST00000407811.5	alternative 5' UTR
ENST00000419772.1	QC splicing correct
ENST00000437680.1	GENCODE experimental pipeline
ENST00000238823.13	MANE_select
ENST00000403368.1	not organism-supported
ENST00000492649.1	not organism-supported
ENST00000669243.1	Assembled from SLRseq reads (SRP049776)
ENST00000658639.1	Assembled from SLRseq reads (SRP049776)
ENST00000366209.6	QC splicing correct
ENST00000366209.6	non canonical polymorphism
ENST00000442026.1	GENCODE experimental pipeline
ENST00000671333.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667658.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664138.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666112.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661209.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650021.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000422558.1	GENCODE experimental pipeline
ENST00000654103.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658168.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664777.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664286.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000423663.5	GENCODE experimental pipeline
ENST00000607437.4	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000453774.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665109.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671252.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671356.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000603129.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659537.1	Assembled from RACEseq reads
ENST00000666399.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649638.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000664906.1	Assembled from SLRseq reads (SRP049776)
ENST00000458413.2	QC splicing correct
ENST00000453451.5	GENCODE experimental pipeline
ENST00000658336.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000586769.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659872.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669873.1	Assembled from SLRseq reads (SRP049776)
ENST00000625996.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662463.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000414796.2	GENCODE experimental pipeline
ENST00000654041.1	Assembled from SLRseq reads (SRP049776)
ENST00000280527.7	MANE_select
ENST00000405912.8	MANE_select
ENST00000263918.9	MANE_select
ENST00000425467.5	QC splicing correct
ENST00000233099.6	MANE_select
ENST00000674370.2	MANE_select
ENST00000674370.2	upstream ATG
ENST00000681516.1	align_id:3644740|asmbl_134905
ENST00000680273.1	align_id:3644744|asmbl_134909
ENST00000233057.9	MANE_select
ENST00000233057.9	QC splicing correct
ENST00000679979.1	align_id:3644750|asmbl_134915
ENST00000679979.1	long_read_pipeline_2
ENST00000679507.1	align_id:3644720|asmbl_134885
ENST00000681463.1	align_id:3644718|asmbl_134883
ENST00000681463.1	alternative 5' UTR
ENST00000681507.1	align_id:3644736|asmbl_134901
ENST00000681507.1	alternative 5' UTR
ENST00000681329.1	align_id:3644712|asmbl_134877
ENST00000647926.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000647926.1	alternative 3' UTR
ENST00000420611.5	alternative 5' UTR
ENST00000416345.5	alternative 5' UTR
ENST00000433192.1	alternative 5' UTR
ENST00000402297.6	MANE_select
ENST00000406711.5	alternative 5' UTR
ENST00000397226.2	alternative 5' UTR
ENST00000234170.10	MANE_select
ENST00000002125.9	MANE_select
ENST00000416653.5	alternative 5' UTR
ENST00000432075.1	alternative 5' UTR
ENST00000419278.2	not organism-supported
ENST00000234179.8	MANE_select
ENST00000234179.8	genebuild_only_MANE
ENST00000433893.1	GENCODE experimental pipeline
ENST00000647879.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000338415.8	MANE_select
ENST00000668683.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659653.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419425.1	QC splicing correct
ENST00000295324.4	MANE_select
ENST00000453555.1	alternative 5' UTR
ENST00000431712.1	GENCODE experimental pipeline
ENST00000655678.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655948.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446799.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656652.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667610.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659701.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000414644.5	alternative 5' UTR
ENST00000354545.8	MANE_select
ENST00000406384.5	alternative 5' UTR
ENST00000402091.3	not organism-supported
ENST00000496735.1	not organism-supported
ENST00000610745.5	MANE_select
ENST00000494864.1	not organism-supported
ENST00000614273.1	alternative 5' UTR
ENST00000613082.1	non canonical TEC
ENST00000490576.1	alternative 5' UTR
ENST00000628135.3	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000627992.3	Assembled from SLRseq reads (SRP049776)
ENST00000653994.1	Assembled from SLRseq reads (SRP049776)
ENST00000660098.1	Assembled from SLRseq reads (SRP049776)
ENST00000653077.1	Assembled from SLRseq reads (SRP049776)
ENST00000660493.1	Assembled from SLRseq reads (SRP049776)
ENST00000657397.1	Assembled from SLRseq reads (SRP049776)
ENST00000427168.6	non canonical polymorphism
ENST00000623854.1	FLJ13635
ENST00000417213.1	GENCODE experimental pipeline
ENST00000450854.1	GENCODE experimental pipeline
ENST00000378954.9	MANE_select
ENST00000419554.6	NP_071769.1
ENST00000671178.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669429.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667944.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000669322.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000417039.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417039.6	GENCODE experimental pipeline
ENST00000658016.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659803.1	Assembled from SLRseq reads (SRP049776)
ENST00000661472.1	Assembled from SLRseq reads (SRP049776)
ENST00000421463.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413227.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661715.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000457385.1	GENCODE experimental pipeline
ENST00000449105.8	MANE_select
ENST00000449105.8	non canonical conserved
ENST00000409636.5	non canonical conserved
ENST00000272249.7	non canonical conserved
ENST00000409328.5	non canonical conserved
ENST00000410076.5	non canonical conserved
ENST00000488099.1	non canonical conserved
ENST00000427858.4	NMD likely if extended
ENST00000272252.10	MANE_select
ENST00000446277.1	GENCODE experimental pipeline
ENST00000313117.11	MANE_select
ENST00000487773.1	not organism-supported
ENST00000281950.8	MANE_select
ENST00000457308.6	MANE_select
ENST00000479345.2	QC splicing correct
ENST00000619207.1	alternative 5' UTR
ENST00000442829.1	GENCODE experimental pipeline
ENST00000410014.5	alternative 5' UTR
ENST00000409665.5	alternative 5' UTR
ENST00000409077.2	not organism-supported
ENST00000409131.2	QC splicing correct
ENST00000409978.7	CAGE supported TSS
ENST00000409978.7	GENCODE experimental pipeline
ENST00000409978.7	MANE_select
ENST00000411874.6	CAGE supported TSS
ENST00000433605.2	CAGE supported TSS
ENST00000430382.1	not organism-supported
ENST00000402219.8	LR annotation
ENST00000402219.8	MANE_select
ENST00000472480.1	not organism-supported
ENST00000419111.1	not organism-supported
ENST00000263881.8	MANE_select
ENST00000659562.1	Assembled from SLRseq reads (SRP049776)
ENST00000667600.1	Assembled from SLRseq reads (SRP049776)
ENST00000667600.1	FLJ37859
ENST00000451547.2	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000451547.2	Assembled from SLRseq reads (SRP049776)
ENST00000671403.1	Assembled from SLRseq reads (SRP049776)
ENST00000658319.1	Assembled from SLRseq reads (SRP049776)
ENST00000658048.1	Assembled from SLRseq reads (SRP049776)
ENST00000445520.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445520.6	Assembled from RACEseq reads
ENST00000422128.6	Assembled from SLRseq reads (SRP049776)
ENST00000449569.6	Assembled from SLRseq reads (SRP049776)
ENST00000670934.1	Assembled from SLRseq reads (SRP049776)
ENST00000425775.2	Assembled from SLRseq reads (SRP049776)
ENST00000658057.1	Assembled from SLRseq reads (SRP049776)
ENST00000662313.1	Assembled from SLRseq reads (SRP049776)
ENST00000668952.1	Assembled from SLRseq reads (SRP049776)
ENST00000438649.5	FLJ33477
ENST00000281961.3	MANE_select
ENST00000505747.6	MANE_select
ENST00000403537.3	FLJ97702
ENST00000413479.5	QC splicing correct
ENST00000406785.6	alternative 5' UTR
ENST00000405269.5	alternative 5' UTR
ENST00000455476.5	alternative 5' UTR
ENST00000448531.1	alternative 5' UTR
ENST00000417271.1	alternative 5' UTR
ENST00000667072.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649978.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000661871.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000655021.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660664.1	Assembled from SLRseq reads (SRP049776)
ENST00000653206.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657200.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653210.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664801.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649168.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000657390.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653176.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418836.2	GENCODE experimental pipeline
ENST00000398796.4	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000398796.4	GENCODE experimental pipeline
ENST00000661325.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656010.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653561.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652836.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427054.5	GENCODE experimental pipeline
ENST00000436551.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000378711.2	GENCODE experimental pipeline
ENST00000451514.1	GENCODE experimental pipeline
ENST00000294964.6	MANE_select
ENST00000294964.6	NP_612379.2
ENST00000475241.1	not organism-supported
ENST00000490302.1	not organism-supported
ENST00000422013.2	GENCODE experimental pipeline
ENST00000318522.10	MANE_select
ENST00000401738.3	not organism-supported
ENST00000234301.3	MANE_select
ENST00000234301.3	genebuild_only_MANE
ENST00000306078.2	MANE_select
ENST00000405592.5	FLJ45312
ENST00000406652.5	KIAA126
ENST00000405094.2	MANE_select
ENST00000482875.5	FLJ16152
ENST00000294973.11	MANE_select
ENST00000453565.1	not organism-supported
ENST00000457457.2	GENCODE experimental pipeline
ENST00000654608.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670864.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000422351.5	GENCODE experimental pipeline
ENST00000425212.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662442.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665782.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000449766.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668762.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661354.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656487.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438736.1	GENCODE experimental pipeline
ENST00000670047.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661106.1	Assembled from SLRseq reads (SRP049776)
ENST00000663868.1	Assembled from SLRseq reads (SRP049776)
ENST00000654095.1	Assembled from RACEseq reads
ENST00000434020.1	GENCODE experimental pipeline
ENST00000669652.1	Assembled from SLRseq reads (SRP049776)
ENST00000658582.1	Assembled from SLRseq reads (SRP049776)
ENST00000660392.1	Assembled from SLRseq reads (SRP049776)
ENST00000282388.4	MANE_select
ENST00000423354.1	GENCODE experimental pipeline
ENST00000405975.7	MANE_select
ENST00000282406.9	MANE_select
ENST00000475092.4	MANE_select
ENST00000260605.12	MANE_select
ENST00000489222.6	non canonical TEC
ENST00000605786.5	NAGNAG splice site
ENST00000405322.8	CAGE supported TSS
ENST00000405322.8	LR annotation
ENST00000405322.8	MANE_select
ENST00000486512.5	QC splicing correct
ENST00000644611.1	CAGE supported TSS
ENST00000272286.4	CAGE supported TSS
ENST00000272286.4	LR annotation
ENST00000272286.4	MANE_select
ENST00000260665.12	MANE_select
ENST00000419807.5	alternative 5' UTR
ENST00000282412.9	MANE_select
ENST00000409473.2	not organism-supported
ENST00000649044.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000260649.11	MANE_select
ENST00000409411.6	MANE_select
ENST00000409411.6	alternative 5' UTR
ENST00000409272.5	alternative 5' UTR
ENST00000540817.1	NMD candidate
ENST00000438314.1	alternative 5' UTR
ENST00000378494.8	MANE_select
ENST00000454433.5	QC splicing correct
ENST00000260653.5	MANE_select
ENST00000303077.7	MANE_select
ENST00000423433.1	GENCODE experimental pipeline
ENST00000427020.6	Extended using assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000658738.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000378479.5	GENCODE experimental pipeline
ENST00000430650.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000442821.1	GENCODE experimental pipeline
ENST00000652791.1	Assembled from SLRseq reads (SRP049776)
ENST00000663266.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000263736.5	MANE_select
ENST00000306156.8	MANE_select
ENST00000444077.1	QC splicing correct
ENST00000449347.5	alternative 5' UTR
ENST00000263734.5	MANE_select
ENST00000468530.1	QC splicing correct
ENST00000418415.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418415.2	GENCODE experimental pipeline
ENST00000654557.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665509.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669411.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449601.5	CAGE supported TSS
ENST00000642724.1	CAGE supported TSS
ENST00000432241.5	CAGE supported TSS
ENST00000524249.5	QC splicing correct
ENST00000522587.6	MANE_select
ENST00000522587.6	alternative 5' UTR
ENST00000238738.9	MANE_select
ENST00000281382.11	MANE_select
ENST00000474980.1	alternative 5' UTR
ENST00000486447.1	not organism-supported
ENST00000238892.4	MANE_select
ENST00000650611.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000394861.3	MANE_select
ENST00000394861.3	alternative 5' UTR
ENST00000650009.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000653090.1	Assembled from SLRseq reads (SRP049776)
ENST00000453936.1	GENCODE experimental pipeline
ENST00000429761.1	GENCODE experimental pipeline
ENST00000409105.5	alternative 5' UTR
ENST00000319466.9	MANE_select
ENST00000409800.5	alternative 5' UTR
ENST00000649435.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000409207.5	alternative 5' UTR
ENST00000409973.5	alternative 5' UTR
ENST00000409218.5	alternative 5' UTR
ENST00000412438.5	alternative 5' UTR
ENST00000417180.1	alternative 5' UTR
ENST00000319190.11	CAGE supported TSS
ENST00000319190.11	LR annotation
ENST00000319190.11	MANE_select
ENST00000461601.5	chimeric cDNA. Left as transcript
ENST00000422201.1	GENCODE experimental pipeline
ENST00000445927.7	MANE_select
ENST00000445927.7	genebuild_only_MANE
ENST00000421759.1	GENCODE experimental pipeline
ENST00000272298.12	MANE_select
ENST00000655450.1	alternative 5' UTR
ENST00000656538.1	alternative 5' UTR
ENST00000655728.1	alternative 5' UTR
ENST00000448713.5	GENCODE experimental pipeline
ENST00000658129.1	Assembled from SLRseq reads (SRP049776)
ENST00000654272.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426892.1	GENCODE experimental pipeline
ENST00000666175.1	Assembled from SLRseq reads (SRP049776)
ENST00000663536.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418539.2	Based on NR_001568.1
ENST00000263735.9	MANE_select
ENST00000233146.7	CAGE supported TSS
ENST00000233146.7	LR annotation
ENST00000233146.7	MANE_select
ENST00000327876.5	MANE_select
ENST00000648301.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000435331.3	GENCODE experimental pipeline
ENST00000652107.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000652107.1	Supported by assembled SLRseq reads (ENA:SRP049776)
ENST00000673922.1	NMD likely if extended
ENST00000234420.11	CAGE supported TSS
ENST00000234420.11	LR annotation
ENST00000234420.11	MANE_select
ENST00000403359.8	MANE_select
ENST00000432064.1	GENCODE experimental pipeline
ENST00000649883.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000658896.1	Assembled from SLRseq reads (SRP049776)
ENST00000661667.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000340553.8	MANE_select
ENST00000431614.5	QC splicing correct
ENST00000294952.13	MANE_select
ENST00000649748.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000649748.1	alternative 5' UTR
ENST00000404752.6	MANE_select
ENST00000404752.6	alternative 5' UTR
ENST00000405008.5	confirmed by NM_172311.1
ENST00000394754.5	alternative 5' UTR
ENST00000463040.5	QC splicing correct
ENST00000403751.8	Confirmed by NM_006872.2 NM_172311.1 and NM_172196.1
ENST00000403751.8	MANE_select
ENST00000294954.12	MANE_select
ENST00000405626.5	QC splicing correct
ENST00000403273.5	QC splicing correct
ENST00000401907.5	QC splicing correct
ENST00000428232.2	QC splicing correct
ENST00000406846.7	MANE_select
ENST00000304421.8	NP_852111.2
ENST00000634253.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000401669.7	MANE_select
ENST00000401669.7	QC splicing correct
ENST00000406316.6	QC splicing correct
ENST00000636345.1	CAGE supported TSS
ENST00000412315.5	CAGE supported TSS
ENST00000404971.5	QC splicing correct
ENST00000342183.9	CAGE supported TSS
ENST00000378262.7	CAGE supported TSS
ENST00000637906.1	CAGE supported TSS
ENST00000630543.2	confirm experimentally
ENST00000331040.9	CAGE supported TSS
ENST00000625891.2	CAGE supported TSS
ENST00000405581.3	QC splicing correct
ENST00000626899.1	NAGNAG splice site
ENST00000416262.6	GENCODE experimental pipeline
ENST00000649515.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000671345.1	Assembled from SLRseq reads (SRP049776)
ENST00000659131.1	Assembled from SLRseq reads (SRP049776)
ENST00000421074.1	no protein supporting  evidence - annotated as it was identified by Yale and UCSC groups as part of the ENCODE project
ENST00000663568.1	Assembled from SLRseq reads (SRP049776)
ENST00000435357.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668945.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000421575.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418451.1	GENCODE experimental pipeline
ENST00000263634.8	MANE_select
ENST00000263634.8	NP_057199.1
ENST00000406687.5	NP_665862.1
ENST00000406687.5	alternative 5' UTR
ENST00000394717.3	NP_665862.1
ENST00000295304.5	MANE_select
ENST00000295304.5	NP_001008708.1
ENST00000185150.9	MANE_select
ENST00000394705.3	MANE_select
ENST00000394705.3	NP_006785.1
ENST00000404125.6	MANE_select
ENST00000607452.6	MANE_select
ENST00000317802.9	MANE_select
ENST00000398634.7	MANE_select
ENST00000398634.7	NP_001093866.1
ENST00000356805.9	MANE_select
ENST00000356805.9	NP_003119.2
ENST00000389980.7	alternative 5' UTR
ENST00000333896.5	NP_842565.2
ENST00000433475.1	GENCODE experimental pipeline
ENST00000456363.1	GENCODE experimental pipeline
ENST00000449838.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647792.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000394609.6	NP_008939.1
ENST00000405240.5	NP_997404.1
ENST00000405240.5	alternative 5' UTR
ENST00000357376.7	NP_997404.1
ENST00000357376.7	alternative 5' UTR
ENST00000337526.11	MANE_select
ENST00000337526.11	NP_997404.1
ENST00000317610.11	NP_722550.1
ENST00000357732.8	NP_997403.1
ENST00000394611.6	NP_997404.1
ENST00000394611.6	alternative 5' UTR
ENST00000404909.5	NP_997404.1
ENST00000427710.5	alternative 5' UTR
ENST00000401408.6	MANE_select
ENST00000401408.6	NP_001129070.1
ENST00000407122.5	alternative 5' UTR
ENST00000451916.1	alternative 5' UTR
ENST00000403506.1	alternative 5' UTR
ENST00000425841.1	alternative 5' UTR
ENST00000402285.7	alternative 5' UTR
ENST00000449323.5	alternative 5' UTR
ENST00000404735.1	alternative 5' UTR
ENST00000272317.11	MANE_select
ENST00000272317.11	NP_002945.1
ENST00000263629.9	MANE_select
ENST00000403721.5	alternative 5' UTR
ENST00000446660.5	Probable_NMD_if_extended
ENST00000446660.5	alternative 5' UTR
ENST00000366137.6	alternative 5' UTR
ENST00000441307.5	alternative 5' UTR
ENST00000404297.1	alternative 5' UTR
ENST00000420637.5	alternative 5' UTR
ENST00000417363.5	alternative 5' UTR
ENST00000412530.1	alternative 5' UTR
ENST00000579162.1	confirm experimentally
ENST00000599352.5	alternative 3' UTR
ENST00000670067.1	Assembled from SLRseq reads (SRP049776)
ENST00000336838.10	NAGNAG splice site
ENST00000436346.7	CAGE supported TSS
ENST00000436346.7	LR annotation
ENST00000436346.7	MANE_select
ENST00000436346.7	alternative 3' UTR
ENST00000263630.13	NP_060554.3
ENST00000643413.1	NAGNAG splice site
ENST00000643413.1	confirm experimentally
ENST00000647547.1	alternative 3' UTR
ENST00000412148.6	alternative 3' UTR
ENST00000646285.1	NAGNAG splice site
ENST00000643265.1	NAGNAG splice site
ENST00000646796.1	NAGNAG splice site
ENST00000645860.1	alternative 3' UTR
ENST00000643440.1	NAGNAG splice site
ENST00000645072.1	NAGNAG splice site
ENST00000644630.1	alternative 5' UTR
ENST00000647098.1	alternative 3' UTR
ENST00000349456.9	MANE_select
ENST00000349456.9	NP_542398
ENST00000611717.4	NP_065196.1
ENST00000616407.2	MANE_select
ENST00000447944.7	MANE_select
ENST00000355426.8	MANE_select
ENST00000355426.8	alternative 5' UTR
ENST00000438672.5	alternative 5' UTR
ENST00000439193.5	alternative 5' UTR
ENST00000440439.5	alternative 5' UTR
ENST00000429909.5	alternative 5' UTR
ENST00000452337.5	alternative 5' UTR
ENST00000424207.5	alternative 5' UTR
ENST00000446139.1	GENCODE experimental pipeline
ENST00000451034.1	GENCODE experimental pipeline
ENST00000668950.1	Assembled from SLRseq reads (SRP049776)
ENST00000659091.1	Assembled from SLRseq reads (SRP049776)
ENST00000447423.3	Assembled from SLRseq reads (SRP049776)
ENST00000432793.5	GENCODE experimental pipeline
ENST00000407595.3	MANE_select
ENST00000649346.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000655725.1	Assembled from SLRseq reads (SRP049776)
ENST00000666406.1	Assembled from SLRseq reads (SRP049776)
ENST00000648897.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000417641.6	NP_001123955.1
ENST00000340157.9	MANE_select
ENST00000661436.1	Assembled from SLRseq reads (SRP049776)
ENST00000233741.9	MANE_select
ENST00000655335.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000454367.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000454367.2	GENCODE experimental pipeline
ENST00000660850.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656381.1	Assembled from SLRseq reads (SRP049776)
ENST00000656135.1	Assembled from SLRseq reads (SRP049776)
ENST00000429664.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665478.1	Assembled from SLRseq reads (SRP049776)
ENST00000663407.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000422793.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665525.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000657130.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000650056.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000665429.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655072.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657378.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669630.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656193.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668410.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664741.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000455219.8	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662396.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671194.1	Assembled from SLRseq reads (SRP049776)
ENST00000650010.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000409590.1	GENCODE experimental pipeline
ENST00000650011.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000444001.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440521.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668635.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656905.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662536.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662067.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668455.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451416.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663939.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668148.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660011.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660819.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669739.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663829.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661091.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671177.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668796.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648110.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000415159.1	GENCODE experimental pipeline
ENST00000658628.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648464.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000648464.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000457668.1	GENCODE experimental pipeline
ENST00000453476.1	GENCODE experimental pipeline
ENST00000660178.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000646249.1	alternative 5' UTR
ENST00000356842.9	NP_060484.2
ENST00000359629.10	NP_612569.1
ENST00000479026.2	alternative 3' UTR
ENST00000643222.1	396418    396379
ENST00000642384.2	MANE_select
ENST00000642384.2	NP_075044.2
ENST00000409351.5	Other evidence: Swiss-Prot isoform Q9H165-8.2  (142 aa)
ENST00000238714.8	MANE_select
ENST00000238714.8	NP_075045.2
ENST00000439412.6	Assembled from SLRseq reads (SRP049776)
ENST00000452343.1	GENCODE experimental pipeline
ENST00000394479.4	MANE_select
ENST00000589496.2	CAGE supported TSS
ENST00000316752.11	MANE_select
ENST00000407787.5	alternative 5' UTR
ENST00000430495.5	NMD
ENST00000295030.6	MANE_select
ENST00000482513.5	EM:BI255503.1 suggests possible poly-A tail however sequence too weak to call. Further evidence may sugest this object is coding
ENST00000402291.6	Cross-species evidence for coding region comes from EM:BC072622.1
ENST00000402291.6	MANE_select
ENST00000453186.5	NMD
ENST00000420918.3	GENCODE experimental pipeline
ENST00000432605.2	align_id:1332049|asmbl_51952
ENST00000357022.6	alternative 5' UTR
ENST00000642732.1	alternative 5' UTR
ENST00000493628.6	made as transcript. Sw:Q719I0.2 AA position 121 throws the reading frame out of alignment. Ensembl removes 5bp to get sequence to code
ENST00000484217.1	not organism-supported
ENST00000398571.7	MANE_select
ENST00000436269.1	QC splicing correct
ENST00000453133.1	not organism-supported
ENST00000603652.2	Assembled from SLRseq reads (SRP049776)
ENST00000664869.1	Assembled from SLRseq reads (SRP049776)
ENST00000603199.2	Assembled from SLRseq reads (SRP049776)
ENST00000677476.1	CAGE supported TSS
ENST00000677417.1	alternative 5' UTR
ENST00000677150.1	alternative 5' UTR
ENST00000678790.1	QC splicing correct
ENST00000676553.1	alternative 5' UTR
ENST00000401558.7	MANE_select
ENST00000404992.6	alternative 5' UTR
ENST00000406957.5	alternative 5' UTR
ENST00000443240.5	alternative 5' UTR
ENST00000449444.5	alternative 5' UTR
ENST00000648141.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000404929.6	MANE_select
ENST00000405894.3	NP_115556.2
ENST00000394440.8	MANE_select
ENST00000425779.1	GENCODE experimental pipeline
ENST00000665043.1	Assembled from SLRseq reads (SRP049776)
ENST00000425966.6	GENCODE experimental pipeline
ENST00000301998.5	MANE_select
ENST00000405767.1	alternative 5' UTR
ENST00000416845.1	GENCODE experimental pipeline
ENST00000335390.6	MANE_select
ENST00000664749.1	Assembled from SLRseq reads (SRP049776)
ENST00000668814.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671367.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000444672.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670260.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664144.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656395.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671180.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671180.1	GENCODE experimental pipeline
ENST00000654251.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657052.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657352.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663494.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659893.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668502.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671204.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000416111.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664816.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653757.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652843.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657674.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665118.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660725.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663301.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667559.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656277.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668862.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655358.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656978.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663236.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662774.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663524.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660313.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665285.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000427809.5	alternative 5' UTR
ENST00000405482.5	alternative 5' UTR
ENST00000431489.6	MANE_select
ENST00000431489.6	alternative 5' UTR
ENST00000444311.1	QC splicing correct
ENST00000657432.1	Assembled from SLRseq reads (SRP049776)
ENST00000452397.1	GENCODE experimental pipeline
ENST00000650490.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000660923.1	Assembled from SLRseq reads (SRP049776)
ENST00000366671.7	alternative 5' UTR
ENST00000282549.7	MANE_select
ENST00000657946.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000272321.12	MANE_select
ENST00000272321.12	NP_056994
ENST00000409120.5	alternative 5' UTR
ENST00000233114.13	MANE_select
ENST00000484142.2	alternative 5' UTR
ENST00000482668.5	alternative 5' UTR
ENST00000467648.6	alternative 5' UTR
ENST00000480679.5	alternative 5' UTR
ENST00000337130.10	MANE_select
ENST00000488245.6	QC splicing correct
ENST00000488245.6	alternative 5' UTR
ENST00000475462.5	alternative 5' UTR
ENST00000491621.5	alternative 5' UTR
ENST00000472047.5	alternative 5' UTR
ENST00000272322.9	MANE_select
ENST00000423539.2	GENCODE experimental pipeline
ENST00000358912.5	MANE_select
ENST00000438115.7	GENCODE experimental pipeline
ENST00000674891.1	NAGNAG splice site
ENST00000675228.1	NAGNAG splice site
ENST00000671318.1	Assembled from SLRseq reads (SRP049776)
ENST00000451350.2	Assembled from SLRseq reads (SRP049776)
ENST00000661002.1	Assembled from SLRseq reads (SRP049776)
ENST00000660901.1	Assembled from SLRseq reads (SRP049776)
ENST00000665224.1	Assembled from SLRseq reads (SRP049776)
ENST00000662258.1	Assembled from SLRseq reads (SRP049776)
ENST00000655199.1	Assembled from SLRseq reads (SRP049776)
ENST00000648144.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000662477.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448204.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448204.2	GENCODE experimental pipeline
ENST00000424119.1	GENCODE experimental pipeline
ENST00000441630.1	GENCODE experimental pipeline
ENST00000647983.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000669208.1	Assembled from SLRseq reads (SRP049776)
ENST00000464281.5	alternative 5' UTR
ENST00000238875.10	MANE_select
ENST00000409537.2	not organism-supported
ENST00000436433.1	GENCODE experimental pipeline
ENST00000445738.5	GENCODE experimental pipeline
ENST00000417695.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000313349.3	MANE_select
ENST00000476805.2	CAGE supported TSS
ENST00000608423.1	CAGE supported TSS
ENST00000439964.1	GENCODE experimental pipeline
ENST00000668450.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445865.1	GENCODE experimental pipeline
ENST00000449259.1	GENCODE experimental pipeline
ENST00000653778.1	Assembled from SLRseq reads (SRP049776)
ENST00000659575.1	Assembled from SLRseq reads (SRP049776)
ENST00000669631.1	Assembled from SLRseq reads (SRP049776)
ENST00000666526.1	Assembled from SLRseq reads (SRP049776)
ENST00000234256.4	MANE_select
ENST00000377990.7	MANE_select
ENST00000649427.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000409784.8	MANE_select
ENST00000409751.1	not organism-supported
ENST00000650256.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000260641.10	MANE_select
ENST00000356388.9	MANE_select
ENST00000440972.1	alternative 5' UTR
ENST00000661422.1	Assembled from SLRseq reads (SRP049776)
ENST00000606239.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652861.1	Assembled from RACEseq reads
ENST00000666114.1	Assembled from SLRseq reads (SRP049776)
ENST00000668467.1	Assembled from SLRseq reads (SRP049776)
ENST00000597541.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653527.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000600508.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000604709.1	non canonical conserved
ENST00000593355.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665696.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664087.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420724.1	GENCODE experimental pipeline
ENST00000411785.1	GENCODE experimental pipeline
ENST00000428647.1	GENCODE experimental pipeline
ENST00000454167.1	GENCODE experimental pipeline
ENST00000496248.5	alternative 5' UTR
ENST00000272369.14	MANE_select
ENST00000466811.2	QC splicing correct
ENST00000606455.5	NMD likely if extended
ENST00000439433.1	GENCODE experimental pipeline
ENST00000666153.1	Assembled from SLRseq reads (SRP049776)
ENST00000435389.6	Assembled from SLRseq reads (SRP049776)
ENST00000653254.1	Assembled from SLRseq reads (SRP049776)
ENST00000412944.1	GENCODE experimental pipeline
ENST00000660433.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451698.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451698.2	GENCODE experimental pipeline
ENST00000670163.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659816.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657974.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664251.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000411701.1	GENCODE experimental pipeline
ENST00000444266.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000444266.2	GENCODE experimental pipeline
ENST00000450294.4	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657551.1	Assembled from SLRseq reads (SRP049776)
ENST00000433133.5	GENCODE experimental pipeline
ENST00000652561.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000652561.2	Assembled from SLRseq reads (SRP049776)
ENST00000657304.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000272342.6	MANE_select
ENST00000433065.1	GENCODE experimental pipeline
ENST00000656421.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658583.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671664.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671625.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662337.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662012.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657510.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657087.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665979.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666947.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670387.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668393.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666140.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670245.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654087.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654731.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660443.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670216.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657136.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665414.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667125.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666185.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665794.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419809.1	GENCODE experimental pipeline
ENST00000651017.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000457448.1	GENCODE experimental pipeline
ENST00000410067.8	MANE_select
ENST00000410067.8	alternative 5' UTR
ENST00000407324.5	GENCODE experimental pipeline
ENST00000409302.1	alternative 5' UTR
ENST00000295121.11	FLJ31741
ENST00000295121.11	MANE_select
ENST00000263657.7	MANE_select
ENST00000234310.8	MANE_select
ENST00000608069.1	CAGE supported TSS
ENST00000263655.4	MANE_select
ENST00000366218.2	GENCODE experimental pipeline
ENST00000234313.8	MANE_select
ENST00000377957.4	MANE_select
ENST00000303795.9	MANE_select
ENST00000303786.5	MANE_select
ENST00000409202.8	MANE_select
ENST00000479844.1	not organism-supported
ENST00000655209.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653356.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000415448.1	GENCODE experimental pipeline
ENST00000654239.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652076.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000657362.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654212.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655763.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000415138.1	GENCODE experimental pipeline
ENST00000295379.2	MANE_select
ENST00000637675.1	rs10187256
ENST00000637675.1	rs564515112
ENST00000328895.9	MANE_select
ENST00000328895.9	NP_872342.2
ENST00000377938.4	MANE_select
ENST00000377938.4	NP_062563.3
ENST00000303714.9	MANE_select
ENST00000303714.9	NP_115584.1
ENST00000409829.7	NP_060623.2
ENST00000409349.7	NP_444262.1
ENST00000664941.1	Assembled from SLRseq reads (SRP049776)
ENST00000357308.9	CAGE supported TSS
ENST00000357308.9	MANE_select
ENST00000462320.5	alternative 5' UTR
ENST00000410022.7	MANE_select
ENST00000484177.5	alternative 5' UTR
ENST00000409085.9	MANE_select
ENST00000394295.6	MANE_select
ENST00000415342.1	GENCODE experimental pipeline
ENST00000282570.4	MANE_select
ENST00000282570.4	NP_848526.1
ENST00000244227.8	MANE_select
ENST00000264444.7	MANE_select
ENST00000435880.6	FLJ25084
ENST00000667874.1	Assembled from SLRseq reads (SRP049776)
ENST00000628308.2	non canonical TEC
ENST00000626898.2	non canonical TEC
ENST00000665708.1	Assembled from SLRseq reads (SRP049776)
ENST00000655086.1	Assembled from SLRseq reads (SRP049776)
ENST00000420309.6	Assembled from SLRseq reads (SRP049776)
ENST00000627487.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670036.1	Assembled from SLRseq reads (SRP049776)
ENST00000655096.1	Assembled from SLRseq reads (SRP049776)
ENST00000657291.1	Assembled from SLRseq reads (SRP049776)
ENST00000664483.1	Assembled from SLRseq reads (SRP049776)
ENST00000654878.1	Assembled from SLRseq reads (SRP049776)
ENST00000659586.1	Assembled from SLRseq reads (SRP049776)
ENST00000457770.6	Assembled from SLRseq reads (SRP049776)
ENST00000416395.6	Assembled from SLRseq reads (SRP049776)
ENST00000654336.1	Assembled from RACEseq reads
ENST00000626509.3	Assembled from SLRseq reads (SRP049776)
ENST00000425601.6	Assembled from SLRseq reads (SRP049776)
ENST00000666075.1	Assembled from SLRseq reads (SRP049776)
ENST00000630520.3	Assembled from SLRseq reads (SRP049776)
ENST00000663209.1	Assembled from SLRseq reads (SRP049776)
ENST00000665172.1	Assembled from SLRseq reads (SRP049776)
ENST00000668711.1	Assembled from SLRseq reads (SRP049776)
ENST00000656326.1	Assembled from SLRseq reads (SRP049776)
ENST00000653064.1	Assembled from SLRseq reads (SRP049776)
ENST00000664773.1	Assembled from SLRseq reads (SRP049776)
ENST00000670785.1	Assembled from SLRseq reads (SRP049776)
ENST00000625955.3	Assembled from SLRseq reads (SRP049776)
ENST00000449178.6	Assembled from SLRseq reads (SRP049776)
ENST00000655140.1	Assembled from SLRseq reads (SRP049776)
ENST00000664419.1	Assembled from SLRseq reads (SRP049776)
ENST00000661989.1	Assembled from SLRseq reads (SRP049776)
ENST00000656308.1	Assembled from SLRseq reads (SRP049776)
ENST00000653596.1	Assembled from SLRseq reads (SRP049776)
ENST00000660903.1	Assembled from SLRseq reads (SRP049776)
ENST00000669583.1	Assembled from SLRseq reads (SRP049776)
ENST00000659941.1	Assembled from SLRseq reads (SRP049776)
ENST00000653606.1	Assembled from SLRseq reads (SRP049776)
ENST00000665838.1	Assembled from SLRseq reads (SRP049776)
ENST00000654958.1	Assembled from SLRseq reads (SRP049776)
ENST00000657575.1	Assembled from SLRseq reads (SRP049776)
ENST00000663375.1	Assembled from SLRseq reads (SRP049776)
ENST00000654601.1	Assembled from SLRseq reads (SRP049776)
ENST00000659305.1	Assembled from SLRseq reads (SRP049776)
ENST00000664049.1	Assembled from SLRseq reads (SRP049776)
ENST00000658454.1	Assembled from SLRseq reads (SRP049776)
ENST00000661703.1	Assembled from SLRseq reads (SRP049776)
ENST00000655058.1	Assembled from SLRseq reads (SRP049776)
ENST00000432604.5	non canonical TEC
ENST00000657164.1	Assembled from SLRseq reads (SRP049776)
ENST00000670786.1	Assembled from SLRseq reads (SRP049776)
ENST00000665264.1	Assembled from SLRseq reads (SRP049776)
ENST00000655481.1	Assembled from SLRseq reads (SRP049776)
ENST00000655420.1	Assembled from SLRseq reads (SRP049776)
ENST00000612202.5	Assembled from SLRseq reads (SRP049776)
ENST00000664958.1	Assembled from SLRseq reads (SRP049776)
ENST00000666167.1	Assembled from SLRseq reads (SRP049776)
ENST00000416068.6	Assembled from SLRseq reads (SRP049776)
ENST00000653289.1	Assembled from SLRseq reads (SRP049776)
ENST00000659531.1	Assembled from SLRseq reads (SRP049776)
ENST00000661863.1	Assembled from SLRseq reads (SRP049776)
ENST00000653811.1	Assembled from SLRseq reads (SRP049776)
ENST00000437019.2	Assembled from SLRseq reads (SRP049776)
ENST00000667307.1	Assembled from SLRseq reads (SRP049776)
ENST00000666074.1	Assembled from SLRseq reads (SRP049776)
ENST00000654716.1	Assembled from SLRseq reads (SRP049776)
ENST00000669812.1	Assembled from SLRseq reads (SRP049776)
ENST00000660404.1	Assembled from SLRseq reads (SRP049776)
ENST00000670845.1	Assembled from SLRseq reads (SRP049776)
ENST00000656852.1	Assembled from SLRseq reads (SRP049776)
ENST00000669570.1	Assembled from SLRseq reads (SRP049776)
ENST00000653114.1	Assembled from SLRseq reads (SRP049776)
ENST00000422515.6	Assembled from SLRseq reads (SRP049776)
ENST00000667952.1	Assembled from SLRseq reads (SRP049776)
ENST00000609543.6	Assembled from SLRseq reads (SRP049776)
ENST00000664014.1	Assembled from SLRseq reads (SRP049776)
ENST00000668191.1	Assembled from SLRseq reads (SRP049776)
ENST00000626558.3	Assembled from SLRseq reads (SRP049776)
ENST00000670974.1	Assembled from SLRseq reads (SRP049776)
ENST00000670313.1	Assembled from SLRseq reads (SRP049776)
ENST00000664533.1	Assembled from SLRseq reads (SRP049776)
ENST00000662224.1	Assembled from SLRseq reads (SRP049776)
ENST00000664754.1	Assembled from SLRseq reads (SRP049776)
ENST00000662103.1	Assembled from SLRseq reads (SRP049776)
ENST00000669896.1	Assembled from SLRseq reads (SRP049776)
ENST00000629943.3	Assembled from SLRseq reads (SRP049776)
ENST00000625788.3	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000663033.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662425.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000439892.6	Assembled from SLRseq reads (SRP049776)
ENST00000424748.1	GENCODE experimental pipeline
ENST00000303577.7	MANE_select
ENST00000414141.1	GENCODE experimental pipeline
ENST00000414141.1	LOC100133985
ENST00000264434.7	FLJ20558
ENST00000264434.7	MANE_select
ENST00000433529.7	MANE_select
ENST00000433351.7	MANE_select
ENST00000272348.7	MANE_select
ENST00000037869.7	FLJ14668
ENST00000430566.6	MANE_select
ENST00000295400.11	MANE_select
ENST00000441238.1	GENCODE experimental pipeline
ENST00000264436.9	MANE_select
ENST00000407644.6	alternative 5' UTR
ENST00000413157.6	alternative 5' UTR
ENST00000430656.5	alternative 5' UTR
ENST00000415348.5	alternative 5' UTR
ENST00000425976.5	alternative 5' UTR
ENST00000447731.6	alternative 5' UTR
ENST00000663725.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000457851.1	GENCODE experimental pipeline
ENST00000332372.6	MANE_select
ENST00000272367.7	MANE_select
ENST00000272367.7	protein evidence is not full length
ENST00000410009.5	MANE_select
ENST00000410009.5	non canonical conserved
ENST00000449073.2	GENCODE experimental pipeline
ENST00000234392.3	MANE_select
ENST00000234396.10	CAGE supported TSS
ENST00000234396.10	LR annotation
ENST00000234396.10	MANE_select
ENST00000422761.1	GENCODE experimental pipeline
ENST00000272421.10	FLJ12056
ENST00000360589.4	MANE_select
ENST00000272438.9	MANE_select
ENST00000416229.1	GENCODE experimental pipeline
ENST00000434990.1	GENCODE experimental pipeline
ENST00000642062.1	ENA ID EGAS00001001486
ENST00000418807.7	CAGE supported TSS
ENST00000443872.6	CAGE supported TSS
ENST00000443938.6	CAGE supported TSS
ENST00000484984.1	CAGE supported TSS
ENST00000493102.5	CAGE supported TSS
ENST00000244204.11	CAGE supported TSS
ENST00000244204.11	MANE_select
ENST00000465105.5	CAGE supported TSS
ENST00000480411.5	CAGE supported TSS
ENST00000533981.5	CAGE supported TSS
ENST00000472519.5	CAGE supported TSS
ENST00000428360.2	not organism-supported
ENST00000244217.6	MANE_select
ENST00000653174.1	Assembled from SLRseq reads (SRP049776)
ENST00000244230.7	MANE_select
ENST00000244221.9	MANE_select
ENST00000437658.2	alternative 5' UTR
ENST00000409544.5	alternative 5' UTR
ENST00000455226.5	alternative 5' UTR
ENST00000454278.5	alternative 5' UTR
ENST00000417778.5	alternative 5' UTR
ENST00000454122.1	alternative 5' UTR
ENST00000264447.9	MANE_select
ENST00000429174.6	NP_001124450
ENST00000410020.8	MANE_select
ENST00000479049.6	QC splicing correct
ENST00000001146.7	MANE_select
ENST00000001146.7	NP_063938.1
ENST00000272427.11	MANE_select
ENST00000272427.11	NP_056004.1
ENST00000234454.6	MANE_select
ENST00000258106.11	MANE_select
ENST00000272433.7	MANE_select
ENST00000486777.7	MANE_select
ENST00000608612.1	CAGE supported TSS
ENST00000398468.4	MANE_select
ENST00000389501.9	MANE_select
ENST00000258083.3	MANE_select
ENST00000480093.1	not organism-supported
ENST00000258091.10	MANE_select
ENST00000521871.5	QC splicing correct
ENST00000520530.3	MANE_select
ENST00000520530.3	alternative 5' UTR
ENST00000436467.4	MANE_select
ENST00000661452.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000646469.1	CAGE supported TSS
ENST00000613296.6	CAGE supported TSS
ENST00000613296.6	LR annotation
ENST00000613296.6	MANE_select
ENST00000614410.4	confirm experimentally
ENST00000464408.3	NMD likely if extended
ENST00000464408.3	QC splicing correct
ENST00000272425.4	MANE_select
ENST00000652439.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000272424.11	MANE_select
ENST00000272444.7	NP_003575.2
ENST00000409561.1	GENCODE experimental pipeline
ENST00000666273.1	Assembled from SLRseq reads (SRP049776)
ENST00000394070.7	MANE_select
ENST00000409707.5	alternative 5' UTR
ENST00000452725.5	alternative 5' UTR
ENST00000432295.6	alternative 5' UTR
ENST00000424659.5	alternative 5' UTR
ENST00000650890.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000345517.8	MANE_select
ENST00000345517.8	Protein evidence has an amino acid insertion at position 3 and an amino acid change from E to D at position 6
ENST00000409624.1	alternative 5' UTR
ENST00000264093.9	MANE_select
ENST00000667561.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000439192.1	GENCODE experimental pipeline
ENST00000409262.8	MANE_select
ENST00000409262.8	NP_001274420.1
ENST00000652224.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000327428.10	MANE_select
ENST00000295326.4	NP_001030582.1
ENST00000469676.1	not organism-supported
ENST00000655044.1	Assembled from SLRseq reads (SRP049776)
ENST00000423477.2	GENCODE experimental pipeline
ENST00000533563.2	Assembled from SLRseq reads (SRP049776)
ENST00000656407.1	Assembled from SLRseq reads (SRP049776)
ENST00000396049.5	MANE_select
ENST00000394053.7	MANE_select
ENST00000394053.7	protein evidence starts at an internal methionine
ENST00000678623.1	CAGE supported TSS
ENST00000678623.1	upstream ATG
ENST00000678731.1	CAGE supported TSS
ENST00000677558.1	CAGE supported TSS
ENST00000678633.1	CAGE supported TSS
ENST00000394019.6	NP_597812
ENST00000377634.8	NP_067019
ENST00000444570.5	alternative 5' UTR
ENST00000436454.1	alternative 5' UTR
ENST00000628224.3	CAGE supported TSS
ENST00000628224.3	MANE_select
ENST00000680606.1	CAGE supported TSS
ENST00000664266.1	Assembled from SLRseq reads (SRP049776)
ENST00000416630.2	Assembled from SLRseq reads (SRP049776)
ENST00000427343.6	Assembled from SLRseq reads (SRP049776)
ENST00000426715.5	GENCODE experimental pipeline
ENST00000664792.1	Assembled from SLRseq reads (SRP049776)
ENST00000666479.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000348227.4	MANE_select
ENST00000482605.1	not organism-supported
ENST00000272430.10	MANE_select
ENST00000460968.1	not organism-supported
ENST00000233331.12	MANE_select
ENST00000233331.12	Protein evidence starts at an internal methionine
ENST00000469849.1	not organism-supported
ENST00000455562.1	not organism-supported
ENST00000233615.7	MANE_select
ENST00000428943.1	not organism-supported
ENST00000448666.7	LR annotation
ENST00000448666.7	MANE_select
ENST00000409065.5	QC splicing correct
ENST00000648810.1	alternative 5' UTR
ENST00000656025.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000258105.8	MANE_select
ENST00000393965.8	MANE_select
ENST00000290418.4	FLJ14397
ENST00000474681.1	not organism-supported
ENST00000233623.11	CAGE supported TSS
ENST00000233623.11	MANE_select
ENST00000377566.9	MANE_select
ENST00000479098.1	QC splicing correct
ENST00000233630.11	FLJ43754
ENST00000233630.11	MANE_select
ENST00000233638.8	MANE_select
ENST00000393951.6	FLJ23757
ENST00000393951.6	a/gc-cag\ splicing between exons 1 and 2
ENST00000393951.6	alternative 5' UTR
ENST00000404568.4	MANE_select
ENST00000404568.4	NP_598376
ENST00000473508.1	FLJ35101
ENST00000425118.5	Unlikely to code as probably would undergo NMD
ENST00000377526.4	MANE_select
ENST00000377526.4	NP_853553.1
ENST00000377526.4	corf
ENST00000258080.8	MANE_select
ENST00000264094.8	MANE_select
ENST00000409549.5	alternative 5' UTR
ENST00000413469.1	alternative 5' UTR
ENST00000484369.1	not organism-supported
ENST00000233668.10	MANE_select
ENST00000290536.9	D6Mm5e
ENST00000290536.9	FLJ44410
ENST00000409585.5	GENCODE experimental pipeline
ENST00000421985.1	alternative 5' UTR
ENST00000357877.7	MANE_select
ENST00000660620.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671357.1	Assembled from SLRseq reads (SRP049776)
ENST00000610008.1	CAGE supported TSS
ENST00000290573.7	MANE_select
ENST00000418001.1	QC splicing correct
ENST00000453951.1	GENCODE experimental pipeline
ENST00000483063.2	MANE_select
ENST00000305249.10	MANE_select
ENST00000424400.1	not organism-supported
ENST00000393913.8	FLJ13391
ENST00000393913.8	MANE_select
ENST00000410113.5	alternative 5' UTR
ENST00000410010.1	not organism-supported
ENST00000410071.5	alternative 5' UTR
ENST00000432649.5	alternative 5' UTR
ENST00000452003.1	alternative 5' UTR
ENST00000444852.1	GENCODE experimental pipeline
ENST00000451622.2	GENCODE experimental pipeline
ENST00000393909.7	MANE_select
ENST00000321027.8	MANE_select
ENST00000652200.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000670606.1	Assembled from SLRseq reads (SRP049776)
ENST00000669228.1	Assembled from SLRseq reads (SRP049776)
ENST00000654219.1	Assembled from SLRseq reads (SRP049776)
ENST00000668214.1	Assembled from SLRseq reads (SRP049776)
ENST00000670984.1	Assembled from SLRseq reads (SRP049776)
ENST00000669342.1	Assembled from SLRseq reads (SRP049776)
ENST00000665445.1	Assembled from SLRseq reads (SRP049776)
ENST00000669532.1	Assembled from SLRseq reads (SRP049776)
ENST00000651711.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000409884.6	MANE_select
ENST00000659408.1	Assembled from SLRseq reads (SRP049776)
ENST00000445178.1	GENCODE experimental pipeline
ENST00000653521.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000667782.1	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000437233.1	GENCODE experimental pipeline
ENST00000438443.1	GENCODE experimental pipeline
ENST00000447303.1	ribosomal protein L38 (PRL38) pseudogene
ENST00000663337.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661594.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000443419.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665618.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654589.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666900.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653968.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662760.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662583.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655538.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000670725.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652628.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000272324.10	MANE_select
ENST00000305089.8	MANE_select
ENST00000233735.2	MANE_select
ENST00000305165.3	CAGE supported TSS
ENST00000305165.3	MANE_select
ENST00000490901.2	alternative 5' UTR
ENST00000415201.1	GENCODE experimental pipeline
ENST00000466387.5	alternative 5' UTR
ENST00000451966.5	alternative 5' UTR
ENST00000402739.9	MANE_select
ENST00000409971.6	alternative 5' UTR
ENST00000651336.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000668932.1	Assembled from SLRseq reads (SRP049776)
ENST00000443301.2	Assembled from SLRseq reads (SRP049776)
ENST00000443301.2	GENCODE experimental pipeline
ENST00000655263.1	Assembled from SLRseq reads (SRP049776)
ENST00000418621.1	GENCODE experimental pipeline
ENST00000295057.4	MANE_select
ENST00000409148.1	alternative 5' UTR
ENST00000416268.1	alternative 5' UTR
ENST00000452811.1	alternative 5' UTR
ENST00000415098.1	alternative 5' UTR
ENST00000609950.1	nested 454 RNA-Seq supported
ENST00000595478.5	non canonical TEC
ENST00000450290.1	GENCODE experimental pipeline
ENST00000656933.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656933.1	GENCODE experimental pipeline
ENST00000657999.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654231.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446580.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657869.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426710.1	not organism-supported
ENST00000455845.1	GENCODE experimental pipeline
ENST00000651910.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000437290.2	GENCODE experimental pipeline
ENST00000441039.1	not organism-supported
ENST00000428871.1	not organism-supported
ENST00000419540.1	not organism-supported
ENST00000652642.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000440495.1	GENCODE experimental pipeline
ENST00000393868.7	MANE_select
ENST00000393868.7	NP_003840.2
ENST00000393868.7	protein evidence starts at internal methionine
ENST00000651342.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000430989.1	Probable_NMD_if_extended
ENST00000389394.8	CAGE supported TSS
ENST00000389394.8	MANE_select
ENST00000389394.8	Q9C0G6-1
ENST00000494025.1	alternative 5' UTR
ENST00000335459.9	NP_001074293.1
ENST00000479944.5	QC splicing correct
ENST00000409520.7	MANE_select
ENST00000409520.7	genebuild_only_MANE
ENST00000233143.6	MANE_select
ENST00000671359.1	Assembled from SLRseq reads (SRP049776)
ENST00000660157.1	Assembled from SLRseq reads (SRP049776)
ENST00000661374.1	Assembled from SLRseq reads (SRP049776)
ENST00000409785.9	MANE_select
ENST00000409785.9	non canonical U12
ENST00000428691.5	alternative 5' UTR
ENST00000453448.1	non canonical U12
ENST00000650835.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000282111.4	MANE_select
ENST00000433581.1	GENCODE experimental pipeline
ENST00000377386.8	MANE_select
ENST00000377386.8	NP_006455.2
ENST00000295802.9	FLJ90780
ENST00000295802.9	MANE_select
ENST00000295802.9	NP_060220.2
ENST00000438611.4	QC splicing correct
ENST00000409331.6	alternative 5' UTR
ENST00000409344.7	alternative 5' UTR
ENST00000393852.8	alternative 5' UTR
ENST00000409013.8	MANE_select
ENST00000409013.8	QC splicing correct
ENST00000462891.7	alternative 5' UTR
ENST00000418268.5	alternative 5' UTR
ENST00000263867.9	MANE_select
ENST00000409670.5	QC splicing correct
ENST00000409724.5	alternative 5' UTR
ENST00000439385.5	alternative 5' UTR
ENST00000449030.5	alternative 5' UTR
ENST00000447219.6	alternative 5' UTR
ENST00000409275.1	alternative 5' UTR
ENST00000415012.1	robable_NMD_if_extended
ENST00000651365.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000481395.7	NAGNAG splice site
ENST00000481395.7	QC splicing correct
ENST00000481426.6	alternative 3' UTR
ENST00000340326.2	NP_940884.1
ENST00000667933.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000306434.8	MANE_select
ENST00000233838.9	MANE_select
ENST00000263864.10	MANE_select
ENST00000306384.5	MANE_select
ENST00000306368.9	MANE_select
ENST00000306368.9	NP_057578.1
ENST00000334462.10	FLJ90024
ENST00000334462.10	MANE_select
ENST00000334462.10	NP_001026908.1
ENST00000306353.7	NP_699173.1
ENST00000409668.1	alternative 5' UTR
ENST00000451147.5	QC splicing correct
ENST00000425160.1	alternative 5' UTR
ENST00000323701.11	MANE_select
ENST00000306336.6	MANE_select
ENST00000306336.6	NP_001013671.2
ENST00000519937.7	CAGE supported TSS
ENST00000519937.7	MANE_select
ENST00000519937.7	alternative 3' UTR
ENST00000409383.6	NP_942140.2
ENST00000409383.6	upstream ATG
ENST00000263863.9	MANE_select
ENST00000263863.9	NP_006424.2
ENST00000409696.7	NP_036615.2
ENST00000306279.4	MANE_select
ENST00000306279.4	NP_116216.1
ENST00000366278.2	GENCODE experimental pipeline
ENST00000638572.2	MANE_select
ENST00000638572.2	NP_003887.3
ENST00000640378.1	alternative 3' UTR
ENST00000393808.8	CAGE supported TSS
ENST00000393808.8	NP_001035902.1
ENST00000640322.1	alternative 5' UTR
ENST00000638659.1	alternative 3' UTR
ENST00000640315.1	alternative 3' UTR
ENST00000639432.1	alternative 5' UTR
ENST00000639184.1	alternative 5' UTR
ENST00000640982.1	alternative 5' UTR
ENST00000640992.1	alternative 5' UTR
ENST00000640295.1	alternative 3' UTR
ENST00000638885.1	alternative 3' UTR
ENST00000640594.1	alternative 3' UTR
ENST00000638484.1	alternative 3' UTR
ENST00000638542.1	alternative 3' UTR
ENST00000639820.1	alternative 3' UTR
ENST00000638986.1	alternative 5' UTR
ENST00000639541.1	alternative 3' UTR
ENST00000639981.1	alternative 3' UTR
ENST00000640903.1	alternative 3' UTR
ENST00000640314.1	alternative 3' UTR
ENST00000639216.1	NMD likely if extended
ENST00000638523.1	alternative 3' UTR
ENST00000638581.1	NMD likely if extended
ENST00000640849.1	alternative 3' UTR
ENST00000639421.1	alternative 3' UTR
ENST00000639519.1	alternative 3' UTR
ENST00000455892.1	alternative 5' UTR
ENST00000639690.1	alternative 3' UTR
ENST00000461892.6	NMD likely if extended
ENST00000461199.6	NMD likely if extended
ENST00000433665.6	alternative 3' UTR
ENST00000638258.1	alternative 5' UTR
ENST00000665352.1	Assembled from SLRseq reads (SRP049776)
ENST00000657518.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000263857.11	MANE_select
ENST00000409681.1	not organism-supported
ENST00000254630.12	MANE_select
ENST00000254630.12	NP_060422.4
ENST00000410111.8	MANE_select
ENST00000410111.8	NP_006830.2
ENST00000254644.12	NP_663619.1 isoform b
ENST00000337109.9	MANE_select
ENST00000337109.9	NP_057706.2 isoform a
ENST00000538924.7	CAGE supported TSS
ENST00000538924.7	MANE_select
ENST00000452034.5	alternative 5' UTR
ENST00000312912.10	MANE_select
ENST00000312912.10	genebuild_only_MANE
ENST00000409064.5	alternative 5' UTR
ENST00000427678.1	alternative 5' UTR
ENST00000263856.9	MANE_select
ENST00000263856.9	NP_057163.1 isoform 1
ENST00000409225.2	NP_001005753.1
ENST00000424788.1	not organism-supported
ENST00000237455.5	MANE_select
ENST00000283632.5	MANE_select
ENST00000466417.2	QC splicing correct
ENST00000283635.8	MANE_select
ENST00000283635.8	There is an upstream methonine but there is published evidence to show that this gene starts at an internal methionine
ENST00000409511.6	alternative 5' UTR
ENST00000409781.1	QC splicing correct
ENST00000393759.6	NP_742099.1
ENST00000349455.7	NP_742100.1
ENST00000331469.6	NP_757362.1
ENST00000390655.12	MANE_select
ENST00000390655.12	NP_004922.1
ENST00000641458.2	MANE_select
ENST00000355705.4	MANE_select
ENST00000355705.4	NP_001027564
ENST00000667385.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426110.1	NP_073153.1
ENST00000664547.1	Assembled from SLRseq reads (SRP049776)
ENST00000421835.2	IGKV3/OR2-268*02
ENST00000421835.2	ORF
ENST00000409898.2	QC splicing correct
ENST00000419680.6	QC splicing correct
ENST00000419680.6	not best-in-genome evidence
ENST00000359481.9	MANE_select
ENST00000494592.1	QC splicing correct
ENST00000662935.1	Assembled from SLRseq reads (SRP049776)
ENST00000665969.1	Assembled from SLRseq reads (SRP049776)
ENST00000662952.1	Assembled from SLRseq reads (SRP049776)
ENST00000347055.4	MANE_select
ENST00000419482.7	MANE_select
ENST00000295834.8	MANE_select
ENST00000674334.2	MANE_select
ENST00000419759.5	alternative 5' UTR
ENST00000674282.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674282.1	Assembled from SLRseq reads (SRP049776)
ENST00000496844.6	Assembled from SLRseq reads (SRP049776)
ENST00000674169.1	FLJ10916
ENST00000674169.1	NP_060741.3
ENST00000428390.3	MANE_select
ENST00000428390.3	upstream ATG
ENST00000303254.4	FLJ25369
ENST00000303254.4	MANE_select
ENST00000413234.1	GENCODE experimental pipeline
ENST00000303236.9	CAGE supported TSS
ENST00000303236.9	CARS
ENST00000303236.9	LR annotation
ENST00000303236.9	MANE_select
ENST00000453008.2	GENCODE experimental pipeline
ENST00000668866.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000283646.5	MANE_select
ENST00000390237.2	LR annotation
ENST00000390241.3	IGKJ2*04
ENST00000390243.2	IGKV4-1*01 allele
ENST00000390244.2	IGKV5-2*01 allele
ENST00000496168.1	IGLV1-5*01 allele
ENST00000464162.1	IGLKV1-6*01 allele
ENST00000390247.2	This gene is an ORF due to the mutation in the acceptor splice (nggnn instead of nagnn)
ENST00000390247.2	non canonical polymorphism
ENST00000495489.1	IGKV1-8*01 allele
ENST00000495489.1	This gene is one of the five ORF genes of the IGKV1 subgroup in the IGK locus. ORF due to a 21nt deletion starting at nucleotide 4 of the DECAMER in the promoter
ENST00000493819.1	IGKV1-9*01 allele
ENST00000521705.1	This gene is a pseudogene due to the conserved TRP being replaced by a STOP codon at position 41 in FR2-IMGT
ENST00000390256.2	This gene is an ORF due to a non-canonical V-heptamer sequence: cactgtg instead of cacagtg
ENST00000465170.1	This gene is an ORF due to the 2nd CYS (position 104 in the FR3-IMGT) being replaced by a Glycine (ggt)
ENST00000498574.1	IGKV1-39*01 allele
ENST00000498574.1	This gene is one of the 15-16 functional genes in the IGKV1 subgroup
ENST00000429992.2	F
ENST00000429992.2	IGKV2D-40*01
ENST00000448155.2	F
ENST00000448155.2	IGKV1D-39*01
ENST00000509129.1	IGKV1D-37*01
ENST00000509129.1	ORF
ENST00000390265.2	IGKV1D-33*01 allele
ENST00000453166.2	IGKV2D-28*01 allele
ENST00000462693.1	IGKV2D-24*01 allele
ENST00000436451.2	IGKV6D-21*01 allele
ENST00000436451.2	This gene is an ORF due to a non-canonical V-heptamer: cactgtg instead of cacagtg
ENST00000390270.2	IGKV3D-20*01 allele
ENST00000390271.2	IGKV6D-41*01 allele
ENST00000390271.2	This gene is an ORF due to a non-canonical V-heptamer: cactgtg instead of cacagtg
ENST00000483379.1	IGKV1D-17*01 allele
ENST00000492446.1	This is one of the 15-16 functional genes of the IGKV1 subgroup and it is located in the distal cluster of the IGK locus
ENST00000390276.2	The IGKV1D-12 is one of the 15-16 functional genes of the IGKV1 subgroup. IGKV1D-12 is in the distal cluster
ENST00000468879.1	This is one of the 15-16 functional genes of the IGKV1 subgroup. This IGLKV1D-43*01 allele is in the distal cluster of the IGK locus
ENST00000471857.2	This is one of the 15-16 functional genes of the IGKV1 subgroup. The IGKV1D-8*01 allele is in the distal cluster of the IGK locus
ENST00000423080.2	IGKV3D-7*01 allele
ENST00000423080.2	One of 6 or 7 functional genes of the IGKV3 subgroup. This gene is part of the distal cluster
ENST00000603238.1	IGKV1/OR2-118*01
ENST00000603238.1	P
ENST00000443397.3	ORF
ENST00000613775.1	IGKV1/OR1-1*01
ENST00000613775.1	P
ENST00000609777.5	CAGE supported TSS
ENST00000436174.5	QC splicing correct
ENST00000655443.1	Assembled from SLRseq reads (SRP049776)
ENST00000514060.2	IGKV1/OR2-1
ENST00000514060.2	P
ENST00000432432.7	not best-in-genome evidence
ENST00000652556.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000295201.5	MANE_select
ENST00000448734.1	GENCODE experimental pipeline
ENST00000309988.9	MANE_select
ENST00000349807.3	NP_071885.1
ENST00000442200.1	GENCODE experimental pipeline
ENST00000657998.1	Assembled from SLRseq reads (SRP049776)
ENST00000272418.7	MANE_select
ENST00000295208.7	MANE_select
ENST00000411425.1	alternative 5' UTR
ENST00000617923.4	NP_001017396.1
ENST00000622059.4	NP_001269327.1
ENST00000614034.5	MANE_select
ENST00000614034.5	NP_066574.2
ENST00000425953.5	GENCODE experimental pipeline
ENST00000317620.14	MANE_select
ENST00000317620.14	genebuild_only_MANE
ENST00000403131.6	alternative 3' UTR
ENST00000295225.10	MANE_select
ENST00000377181.2	not organism-supported
ENST00000468529.1	NP_001030086.1
ENST00000233379.9	MANE_select
ENST00000445649.1	alternative 5' UTR
ENST00000447036.5	alternative 5' UTR
ENST00000418606.1	alternative 5' UTR
ENST00000272395.3	MANE_select
ENST00000660301.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668849.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663977.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658646.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425887.2	GENCODE experimental pipeline
ENST00000660641.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000660608.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668171.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655069.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664191.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657232.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663557.1	Assembled from SLRseq reads (SRP049776)
ENST00000660416.1	Assembled from SLRseq reads (SRP049776)
ENST00000412393.5	GENCODE experimental pipeline
ENST00000659287.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662121.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661329.1	Assembled from SLRseq reads (SRP049776)
ENST00000456556.5	not best-in-genome evidence
ENST00000531153.5	QC splicing correct
ENST00000607780.5	QC splicing correct
ENST00000607780.5	non canonical TEC
ENST00000359548.8	alternative 5' UTR
ENST00000471757.5	GENCODE experimental pipeline
ENST00000439254.1	alternative 5' UTR
ENST00000620793.2	MANE_select
ENST00000288943.5	MANE_select
ENST00000449242.1	GENCODE experimental pipeline
ENST00000337288.10	MANE_select
ENST00000337288.10	NP_064536.2
ENST00000659123.1	Assembled from SLRseq reads (SRP049776)
ENST00000665242.1	Assembled from SLRseq reads (SRP049776)
ENST00000446816.1	GENCODE experimental pipeline
ENST00000666290.1	Assembled from SLRseq reads (SRP049776)
ENST00000432267.3	Assembled from SLRseq reads (SRP049776)
ENST00000258439.8	FLJ20507
ENST00000258439.8	MANE_select
ENST00000432959.1	alternative 5' UTR
ENST00000488633.2	MANE_select
ENST00000323853.10	MANE_select
ENST00000652267.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000652267.1	alternative 5' UTR
ENST00000421534.1	GENCODE experimental pipeline
ENST00000439118.3	MANE_select
ENST00000240423.9	MANE_select
ENST00000451794.6	MANE_select
ENST00000425578.1	GENCODE experimental pipeline
ENST00000357485.8	MANE_select
ENST00000431828.6	MANE_select
ENST00000425656.5	GENCODE experimental pipeline
ENST00000624922.6	MANE_select
ENST00000264963.9	MANE_select
ENST00000377075.3	MANE_select
ENST00000377060.7	NP_951060.1
ENST00000305510.4	MANE_select
ENST00000305510.4	NP_060093.3
ENST00000318357.9	MANE_select
ENST00000418232.5	alternative 3' UTR
ENST00000393537.5	MANE_select
ENST00000305476.10	MANE_select
ENST00000442264.5	alternative 5' UTR
ENST00000449330.1	alternative 5' UTR
ENST00000490605.3	MANE_select
ENST00000661235.1	Assembled from SLRseq reads (SRP049776)
ENST00000670174.1	Assembled from SLRseq reads (SRP049776)
ENST00000605129.1	IGKV2/OR2-1*01
ENST00000605129.1	P
ENST00000605025.1	IGKV2/OR2-2*01
ENST00000605025.1	P
ENST00000411475.2	IGKV1/OR2-3*01
ENST00000411475.2	P
ENST00000414820.6	MANE_select
ENST00000414820.6	alternative 5' UTR
ENST00000474849.1	QC splicing correct
ENST00000463096.5	QC splicing correct
ENST00000463096.5	not best-in-genome evidence
ENST00000468548.1	QC splicing correct
ENST00000468548.1	not best-in-genome evidence
ENST00000420699.9	MANE_select
ENST00000420699.9	alternative 3' UTR
ENST00000652721.1	alternative 3' UTR
ENST00000421946.2	GENCODE experimental pipeline
ENST00000656264.1	Assembled from SLRseq reads (SRP049776)
ENST00000613749.5	Assembled from SLRseq reads (SRP049776)
ENST00000618066.2	Assembled from SLRseq reads (SRP049776)
ENST00000657537.1	Assembled from SLRseq reads (SRP049776)
ENST00000604120.1	IGKV1/OR2-11*01
ENST00000604120.1	P
ENST00000613976.1	IGKV2OR2-8*01
ENST00000613976.1	P
ENST00000603664.1	IGKV2OR2-7D
ENST00000603664.1	P
ENST00000603485.1	P
ENST00000605851.1	IGKV3/OR2-5*01
ENST00000605851.1	P
ENST00000604652.1	IGKV2OR2-7*01
ENST00000604652.1	P
ENST00000605673.1	IGKV2OR2-8*01
ENST00000605673.1	P
ENST00000603957.1	IGKV1OR2-9
ENST00000603957.1	P
ENST00000422600.1	GENCODE experimental pipeline
ENST00000610144.1	454 RNA-Seq supported
ENST00000610030.1	454 RNA-Seq supported
ENST00000608120.1	454 RNA-Seq supported
ENST00000608565.1	454 RNA-Seq supported
ENST00000607984.1	454 RNA-Seq supported
ENST00000607984.1	NAGNAG splice site
ENST00000430893.1	QC splicing correct
ENST00000609751.1	454 RNA-Seq supported
ENST00000359901.8	not best-in-genome evidence
ENST00000650675.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000258424.3	MANE_select
ENST00000289228.7	MANE_select
ENST00000609004.1	nested 454 RNA-Seq supported
ENST00000601127.5	non canonical TEC
ENST00000458149.7	NAGNAG splice site
ENST00000264972.10	MANE_select
ENST00000186436.10	MANE_select
ENST00000186436.10	QC splicing correct
ENST00000432242.5	QC splicing correct
ENST00000477737.6	MANE_select
ENST00000495571.5	QC splicing correct
ENST00000489630.5	QC splicing correct
ENST00000490947.2	CAGE supported TSS
ENST00000490947.2	non canonical conserved
ENST00000409490.5	GENCODE experimental pipeline
ENST00000454230.1	alternative 5' UTR
ENST00000272602.7	CAGE supported TSS
ENST00000272602.7	MANE_select
ENST00000413274.1	GENCODE experimental pipeline
ENST00000409851.8	MANE_select
ENST00000328709.8	MANE_select
ENST00000357765.7	MANE_select
ENST00000409347.5	alternative 5' UTR
ENST00000393487.6	MANE_select
ENST00000393487.6	genebuild_only_MANE
ENST00000409391.1	alternative 5' UTR
ENST00000460768.1	not organism-supported
ENST00000419865.6	Assembled from SLRseq reads (SRP049776)
ENST00000654365.1	Assembled from SLRseq reads (SRP049776)
ENST00000658382.1	Assembled from SLRseq reads (SRP049776)
ENST00000654907.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662898.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669255.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663222.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000397899.7	MANE_select
ENST00000393483.8	MANE_select
ENST00000410001.5	alternative 5' UTR
ENST00000355053.8	alternative 5' UTR
ENST00000409564.6	QC splicing correct
ENST00000478090.5	QC splicing correct
ENST00000650052.2	MANE_select
ENST00000650052.2	upstream ATG
ENST00000409684.2	alternative 5' UTR
ENST00000409684.2	upstream ATG
ENST00000651691.1	MANE_select
ENST00000651691.1	genebuild_only_MANE
ENST00000449211.1	alternative 5' UTR
ENST00000434566.5	alternative 5' UTR
ENST00000415142.1	alternative 5' UTR
ENST00000436234.1	alternative 5' UTR
ENST00000413710.2	NMD likely if extended
ENST00000289359.6	MANE_select
ENST00000473743.5	QC splicing correct
ENST00000338148.8	MANE_select
ENST00000465432.1	QC splicing correct
ENST00000423306.1	alternative 5' UTR
ENST00000308528.9	MANE_select
ENST00000409448.1	alternative 5' UTR
ENST00000264255.8	MANE_select
ENST00000422767.6	QC splicing correct
ENST00000434323.5	QC splicing correct
ENST00000409705.5	alternative 5' UTR
ENST00000289371.11	MANE_select
ENST00000258428.8	MANE_select
ENST00000465835.5	QC splicing correct
ENST00000672756.2	MANE_select
ENST00000672756.2	alternative 5' UTR
ENST00000672204.1	alternative 5' UTR
ENST00000673529.1	NMD likely if extended
ENST00000423966.6	alternative 5' UTR
ENST00000441400.5	alternative 5' UTR
ENST00000673328.1	alternative 5' UTR
ENST00000424600.5	alternative 5' UTR
ENST00000416492.5	alternative 5' UTR
ENST00000673232.1	alternative 5' UTR
ENST00000672197.1	alternative 5' UTR
ENST00000440445.6	alternative 5' UTR
ENST00000440445.6	upstream ATG
ENST00000672857.1	alternative 5' UTR
ENST00000415384.2	alternative 5' UTR
ENST00000415384.2	upstream ATG
ENST00000427118.1	alternative 5' UTR
ENST00000483600.1	alternative 5' UTR
ENST00000452354.5	GENCODE experimental pipeline
ENST00000393437.8	MANE_select
ENST00000264249.8	MANE_select
ENST00000409701.5	alternative 5' UTR
ENST00000409046.5	alternative 5' UTR
ENST00000420858.5	alternative 5' UTR
ENST00000421474.5	alternative 5' UTR
ENST00000418201.5	alternative 5' UTR
ENST00000435960.5	alternative 5' UTR
ENST00000485085.5	alternative 5' UTR
ENST00000466583.1	alternative 5' UTR
ENST00000376865.1	MANE_select
ENST00000264254.11	MANE_select
ENST00000656519.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000424342.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000414647.1	GENCODE experimental pipeline
ENST00000656412.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656514.1	Assembled from SLRseq reads (SRP049776)
ENST00000658941.1	Assembled from SLRseq reads (SRP049776)
ENST00000414965.1	GENCODE experimental pipeline
ENST00000443030.1	GENCODE experimental pipeline
ENST00000671633.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000335681.10	MANE_select
ENST00000430586.1	GENCODE experimental pipeline
ENST00000652285.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000446644.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446644.2	GENCODE experimental pipeline
ENST00000433012.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452364.1	GENCODE experimental pipeline
ENST00000264258.8	MANE_select
ENST00000409733.5	alternative 5' UTR
ENST00000456292.5	alternative 5' UTR
ENST00000409318.2	MANE_select
ENST00000289382.8	MANE_select
ENST00000485752.1	QC splicing correct
ENST00000295317.4	MANE_select
ENST00000324768.6	MANE_select
ENST00000428343.6	MANE_select
ENST00000427042.1	GENCODE experimental pipeline
ENST00000652113.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000651956.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000427603.5	alternative 5' UTR
ENST00000332549.8	MANE_select
ENST00000393414.6	alternative 5' UTR
ENST00000457817.5	alternative 5' UTR
ENST00000657796.1	Assembled from SLRseq reads (SRP049776)
ENST00000452403.5	alternative 5' UTR
ENST00000409929.5	alternative 5' UTR
ENST00000450319.5	alternative 5' UTR
ENST00000428279.5	alternative 5' UTR
ENST00000442590.5	alternative 5' UTR
ENST00000410023.6	MANE_select
ENST00000428188.1	GENCODE experimental pipeline
ENST00000264257.7	MANE_select
ENST00000421464.1	alternative 5' UTR
ENST00000233954.6	MANE_select
ENST00000447231.5	alternative 5' UTR
ENST00000311734.6	NP_003847.2
ENST00000410040.5	alternative 5' UTR
ENST00000233957.7	MANE_select
ENST00000450855.1	alternative 5' UTR
ENST00000436582.1	GENCODE experimental pipeline
ENST00000450893.1	GENCODE experimental pipeline
ENST00000295269.5	MANE_select
ENST00000233969.3	MANE_select
ENST00000258436.10	MANE_select
ENST00000454536.5	alternative 5' UTR
ENST00000412401.3	MANE_select
ENST00000611915.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670084.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657317.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666815.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663518.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000431897.1	GENCODE experimental pipeline
ENST00000435291.1	GENCODE experimental pipeline
ENST00000422683.1	GENCODE experimental pipeline
ENST00000669555.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653480.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000455716.1	GENCODE experimental pipeline
ENST00000447761.1	GENCODE experimental pipeline
ENST00000655320.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000668937.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000458182.1	GENCODE experimental pipeline
ENST00000669131.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669131.1	Assembled from SLRseq reads (SRP049776)
ENST00000658233.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653581.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653581.1	GENCODE experimental pipeline
ENST00000416008.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661379.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658461.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449772.1	GENCODE experimental pipeline
ENST00000654112.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658921.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660711.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662445.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664680.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669146.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451400.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451400.2	GENCODE experimental pipeline
ENST00000666200.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667436.1	Assembled from SLRseq reads (SRP049776)
ENST00000652812.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661607.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000414442.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666546.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657293.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657293.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000664762.1	Assembled from SLRseq reads (SRP049776)
ENST00000667477.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000447380.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670863.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665210.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658704.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659098.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666592.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663107.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657656.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670569.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660572.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665228.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662105.1	Assembled from SLRseq reads (SRP049776)
ENST00000659788.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660280.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659047.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664788.1	Assembled from SLRseq reads (SRP049776)
ENST00000666748.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670643.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658830.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430551.2	GENCODE experimental pipeline
ENST00000424257.1	GENCODE experimental pipeline
ENST00000659877.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438566.1	GENCODE experimental pipeline
ENST00000669335.1	Assembled from SLRseq reads (SRP049776)
ENST00000656653.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654825.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667846.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667846.1	GENCODE experimental pipeline
ENST00000666357.1	Assembled from SLRseq reads (SRP049776)
ENST00000662788.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000453322.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659645.1	Assembled from SLRseq reads (SRP049776)
ENST00000665955.1	Assembled from SLRseq reads (SRP049776)
ENST00000661120.1	Assembled from SLRseq reads (SRP049776)
ENST00000653760.1	Assembled from SLRseq reads (SRP049776)
ENST00000664478.1	Assembled from SLRseq reads (SRP049776)
ENST00000653688.1	Assembled from SLRseq reads (SRP049776)
ENST00000662784.1	Assembled from SLRseq reads (SRP049776)
ENST00000666977.1	Assembled from SLRseq reads (SRP049776)
ENST00000666384.1	Assembled from SLRseq reads (SRP049776)
ENST00000663413.1	Assembled from SLRseq reads (SRP049776)
ENST00000361360.4	MANE_select
ENST00000651283.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000653517.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663378.1	Assembled from SLRseq reads (SRP049776)
ENST00000258455.8	MANE_select
ENST00000669390.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000432211.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661548.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661548.1	GENCODE experimental pipeline
ENST00000258456.3	MANE_select
ENST00000393359.7	MANE_select
ENST00000393359.7	NP_004248
ENST00000433219.1	GENCODE experimental pipeline
ENST00000610036.1	CAGE supported TSS
ENST00000258457.7	FLJ45759
ENST00000258457.7	MANE_select
ENST00000409177.6	alternative 5' UTR
ENST00000409177.6	upstream ATG
ENST00000322142.13	CAGE supported TSS
ENST00000322142.13	alternative 5' UTR
ENST00000530340.6	CAGE supported TSS
ENST00000530340.6	LR annotation
ENST00000530340.6	MANE_select
ENST00000530340.6	alternative 5' UTR
ENST00000530340.6	upstream ATG
ENST00000393353.7	CAGE supported TSS
ENST00000393353.7	alternative 5' UTR
ENST00000344213.9	alternative 5' UTR
ENST00000393352.7	alternative 5' UTR
ENST00000408995.5	CAGE supported TSS
ENST00000408995.5	alternative 5' UTR
ENST00000447958.1	alternative 5' UTR
ENST00000457290.2	GENCODE experimental pipeline
ENST00000658366.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662174.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000233154.9	MANE_select
ENST00000393348.6	alternative 5' UTR
ENST00000425756.1	alternative 5' UTR
ENST00000393349.2	alternative 5' UTR
ENST00000652190.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000654865.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413151.1	GENCODE experimental pipeline
ENST00000238044.8	MANE_select
ENST00000283148.12	MANE_select
ENST00000416298.5	CAGE supported TSS
ENST00000416298.5	alternative 5' UTR
ENST00000444193.5	CAGE supported TSS
ENST00000444193.5	alternative 5' UTR
ENST00000436241.1	alternative 5' UTR
ENST00000479774.5	CAGE supported TSS
ENST00000479621.5	CAGE supported TSS
ENST00000419904.1	GENCODE experimental pipeline
ENST00000409886.4	MANE_select
ENST00000409886.4	QC splicing correct
ENST00000409886.4	not best-in-genome evidence
ENST00000643224.2	MANE_select
ENST00000416057.2	NP_001355236.1
ENST00000451464.1	GENCODE experimental pipeline
ENST00000431411.1	GENCODE experimental pipeline
ENST00000409382.7	alternative 5' UTR
ENST00000419159.2	QC splicing correct
ENST00000419159.2	alternative 5' UTR
ENST00000446058.1	GENCODE experimental pipeline
ENST00000658087.1	Assembled from SLRseq reads (SRP049776)
ENST00000650885.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000658054.1	Assembled from SLRseq reads (SRP049776)
ENST00000443123.1	GENCODE experimental pipeline
ENST00000422203.2	GENCODE experimental pipeline
ENST00000414300.2	Assembled from SLRseq reads (SRP049776)
ENST00000414300.2	GENCODE experimental pipeline
ENST00000414300.2	bp 295 to 298 of EST DA176337.1 do not appear to match to genome
ENST00000654481.1	Assembled from SLRseq reads (SRP049776)
ENST00000660653.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666630.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669483.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669483.1	Assembled from SLRseq reads (SRP049776)
ENST00000443205.2	Assembled from SLRseq reads (SRP049776)
ENST00000662038.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665591.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658627.1	Assembled from SLRseq reads (SRP049776)
ENST00000439893.1	GENCODE experimental pipeline
ENST00000669817.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000441383.5	GENCODE experimental pipeline
ENST00000417284.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000609354.1	454 RNA-Seq supported
ENST00000594764.5	alternative 3' UTR
ENST00000609972.1	nested 454 RNA-Seq supported
ENST00000408999.4	MANE_select
ENST00000408999.4	QC splicing correct
ENST00000408999.4	not best-in-genome evidence
ENST00000409059.5	contains a NAG/NAG splice junction at exon two
ENST00000264047.3	MANE_select
ENST00000424355.1	GENCODE experimental pipeline
ENST00000424355.1	not organism-supported
ENST00000669479.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445083.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445083.2	LOC102724774
ENST00000445083.2	QC splicing correct
ENST00000666270.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000251481.11	MANE_select
ENST00000409067.2	not organism-supported
ENST00000272452.7	MANE_select
ENST00000603004.1	LOC100288503
ENST00000309863.11	MANE_select
ENST00000393321.2	QC splicing correct
ENST00000322353.3	FLJ38668
ENST00000332345.10	alternative 5' UTR
ENST00000449684.6	NMD likely if extended
ENST00000449684.6	QC splicing correct
ENST00000338045.7	alternative 5' UTR
ENST00000411710.1	GENCODE experimental pipeline
ENST00000283195.11	MANE_select
ENST00000295124.9	MANE_select
ENST00000258443.7	MANE_select
ENST00000409271.5	alternative 5' UTR
ENST00000309415.8	MANE_select
ENST00000397712.7	MANE_select
ENST00000411469.1	alternative 5' UTR
ENST00000425576.1	GENCODE experimental pipeline
ENST00000356454.5	MANE_select
ENST00000016946.8	MANE_select
ENST00000479168.1	Note that the supporting evidence is not BIG as it has an equal scoring alignement downstream
ENST00000417926.5	GENCODE experimental pipeline
ENST00000454928.5	QC splicing correct
ENST00000336905.3	GENCODE experimental pipeline
ENST00000272462.3	MANE_select
ENST00000445609.7	MANE_select
ENST00000675752.1	align_id:3651475|asmbl_141640
ENST00000611969.5	MANE_select
ENST00000611969.5	NMD exception
ENST00000414416.2	NMD exception
ENST00000426713.1	NMD exception
ENST00000561715.1	QC splicing correct
ENST00000562665.5	QC splicing correct
ENST00000448359.1	GENCODE experimental pipeline
ENST00000654118.1	Assembled from SLRseq reads (SRP049776)
ENST00000665250.1	Assembled from SLRseq reads (SRP049776)
ENST00000488671.1	not organism-supported
ENST00000632897.1	not best-in-genome evidence
ENST00000456683.2	GENCODE experimental pipeline
ENST00000329516.8	MANE_select
ENST00000329516.8	NP_001116835
ENST00000330331.9	NP_001032955
ENST00000302759.11	CAGE supported TSS
ENST00000302759.11	MANE_select
ENST00000666956.1	alternative 5' UTR
ENST00000477481.1	NMD likely if extended
ENST00000447014.5	alternative 5' UTR
ENST00000436916.1	alternative 5' UTR
ENST00000414159.2	GENCODE experimental pipeline
ENST00000439055.6	MANE_select
ENST00000448863.1	alternative 5' UTR
ENST00000669658.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669917.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661559.1	Assembled from SLRseq reads (SRP049776)
ENST00000653687.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667670.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667670.1	Assembled from SLRseq reads (SRP049776)
ENST00000609220.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000609220.2	Assembled from SLRseq reads (SRP049776)
ENST00000656760.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000609902.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664422.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664422.1	Assembled from SLRseq reads (SRP049776)
ENST00000662335.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666683.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665096.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662889.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658936.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662635.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666204.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666204.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000659458.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664498.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670295.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661655.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664443.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659806.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667218.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669050.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666652.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666367.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656303.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670715.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666144.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666144.1	Assembled from SLRseq reads (SRP049776)
ENST00000659933.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659933.1	Assembled from SLRseq reads (SRP049776)
ENST00000659791.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654473.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664999.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439362.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664009.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660442.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659079.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666390.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656067.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653568.1	Assembled from SLRseq reads (SRP049776)
ENST00000451884.6	Assembled from SLRseq reads (SRP049776)
ENST00000669875.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661945.1	Assembled from SLRseq reads (SRP049776)
ENST00000371162.4	LOC100128130
ENST00000371162.4	polyA site supported by polyA seq
ENST00000669515.1	Assembled from SLRseq reads (SRP049776)
ENST00000431385.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655573.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656416.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656416.1	Assembled from SLRseq reads (SRP049776)
ENST00000662384.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661707.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000441075.1	QC splicing correct
ENST00000432268.1	GENCODE experimental pipeline
ENST00000670010.1	Assembled from SLRseq reads (SRP049776)
ENST00000418615.1	GENCODE experimental pipeline
ENST00000432179.1	alternative 5' UTR
ENST00000393256.8	MANE_select
ENST00000393252.3	alternative 5' UTR
ENST00000438054.1	QC splicing correct
ENST00000451230.1	GENCODE experimental pipeline
ENST00000438897.1	GENCODE experimental pipeline
ENST00000455309.2	GENCODE experimental pipeline
ENST00000426124.1	GENCODE experimental pipeline
ENST00000341068.8	MANE_select
ENST00000451367.3	QC splicing correct
ENST00000446998.2	not organism-supported
ENST00000295408.9	MANE_select
ENST00000409780.5	QC splicing correct
ENST00000671139.1	Assembled from SLRseq reads (SRP049776)
ENST00000283206.9	MANE_select
ENST00000650799.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000649734.1	CAGE supported TSS
ENST00000649734.1	non canonical U12
ENST00000666287.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000331203.7	MANE_select
ENST00000409573.7	MANE_select
ENST00000464305.1	QC splicing correct
ENST00000662099.1	Assembled from SLRseq reads (SRP049776)
ENST00000409871.6	MANE_select
ENST00000502881.2	GENCODE experimental pipeline
ENST00000302558.8	MANE_select
ENST00000233336.7	MANE_select
ENST00000438748.5	alternative 5' UTR
ENST00000430769.1	alternative 5' UTR
ENST00000263331.10	MANE_select
ENST00000458012.2	not organism-supported
ENST00000414784.1	GENCODE experimental pipeline
ENST00000436885.1	GENCODE experimental pipeline
ENST00000661604.1	Assembled from SLRseq reads (SRP049776)
ENST00000667014.1	Assembled from SLRseq reads (SRP049776)
ENST00000671122.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000671122.1	Assembled from SLRseq reads (SRP049776)
ENST00000272542.8	MANE_select
ENST00000480984.1	not organism-supported
ENST00000302450.11	FLJ40629
ENST00000302450.11	MANE_select
ENST00000263339.4	MANE_select
ENST00000670671.1	Assembled from SLRseq reads (SRP049776)
ENST00000263341.7	MANE_select
ENST00000418817.5	alternative 5' UTR
ENST00000432018.5	alternative 5' UTR
ENST00000416750.1	alternative 5' UTR
ENST00000447128.5	QC splicing correct
ENST00000447128.5	alternative 5' UTR
ENST00000259205.5	MANE_select
ENST00000259211.7	MANE_select
ENST00000259213.9	MANE_select
ENST00000393200.7	MANE_select
ENST00000393200.7	alternative 5' UTR
ENST00000437409.1	alternative 5' UTR
ENST00000514072.1	alternative 3' UTR
ENST00000341010.6	MANE_select
ENST00000393197.3	alternative 5' UTR
ENST00000409052.5	alternative 5' UTR
ENST00000409930.4	MANE_select
ENST00000409930.4	alternative 5' UTR
ENST00000245796.11	MANE_select
ENST00000446590.1	GENCODE experimental pipeline
ENST00000662215.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000556070.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000556070.6	Assembled from SLRseq reads (SRP049776)
ENST00000451179.6	Assembled from SLRseq reads (SRP049776)
ENST00000437551.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653055.1	Assembled from SLRseq reads (SRP049776)
ENST00000665814.1	Assembled from SLRseq reads (SRP049776)
ENST00000669027.1	Assembled from SLRseq reads (SRP049776)
ENST00000616073.5	Assembled from SLRseq reads (SRP049776)
ENST00000662286.1	Assembled from SLRseq reads (SRP049776)
ENST00000617278.2	Assembled from RACEseq reads
ENST00000661674.1	Assembled from SLRseq reads (SRP049776)
ENST00000333145.9	GENCODE experimental pipeline
ENST00000654203.1	Assembled from SLRseq reads (SRP049776)
ENST00000663248.1	Assembled from SLRseq reads (SRP049776)
ENST00000665717.1	Assembled from SLRseq reads (SRP049776)
ENST00000553869.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445745.6	Assembled from SLRseq reads (SRP049776)
ENST00000661255.1	Assembled from SLRseq reads (SRP049776)
ENST00000665025.1	Assembled from RACEseq reads
ENST00000429538.8	MANE_select
ENST00000497038.6	CAGE supported TSS
ENST00000653674.1	Assembled from SLRseq reads (SRP049776)
ENST00000422178.1	GENCODE experimental pipeline
ENST00000453673.3	IGKV1/OR2-108*01
ENST00000453673.3	ORF
ENST00000259199.9	MANE_select
ENST00000449954.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449954.2	QC splicing correct
ENST00000449954.2	not best-in-genome evidence
ENST00000671438.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668674.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652488.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000652488.1	NAGNAG splice site
ENST00000446595.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000416105.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000450636.1	PUTATIVE novel protein (variant 2)
ENST00000655915.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666960.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449021.1	RPL23A (60S ribosomal protein L23A) pseudogene
ENST00000413545.5	alternative 5' UTR
ENST00000409121.6	alternative 5' UTR
ENST00000439382.1	GENCODE experimental pipeline
ENST00000424612.1	GENCODE experimental pipeline
ENST00000245680.7	MANE_select
ENST00000470204.2	not organism-supported
ENST00000446401.1	GENCODE experimental pipeline
ENST00000263238.7	MANE_select
ENST00000663402.1	Assembled from RACEseq reads
ENST00000670955.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660948.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656323.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000412690.1	GENCODE experimental pipeline
ENST00000658731.1	Assembled from SLRseq reads (SRP049776)
ENST00000420161.1	GENCODE experimental pipeline
ENST00000666258.1	Assembled from SLRseq reads (SRP049776)
ENST00000410059.6	MANE_select
ENST00000461250.5	FLJ30694
ENST00000417844.1	GENCODE experimental pipeline
ENST00000446992.1	not organism-supported
ENST00000664735.1	Assembled from SLRseq reads (SRP049776)
ENST00000664094.1	Assembled from SLRseq reads (SRP049776)
ENST00000666436.1	Assembled from SLRseq reads (SRP049776)
ENST00000665937.1	Assembled from SLRseq reads (SRP049776)
ENST00000665204.1	Assembled from SLRseq reads (SRP049776)
ENST00000432658.1	GENCODE experimental pipeline
ENST00000668438.1	Assembled from SLRseq reads (SRP049776)
ENST00000658567.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000656175.1	Assembled from SLRseq reads (SRP049776)
ENST00000263239.7	MANE_select
ENST00000474694.1	QC splicing correct
ENST00000664381.1	Assembled from SLRseq reads (SRP049776)
ENST00000668696.1	Assembled from SLRseq reads (SRP049776)
ENST00000319432.9	GENCODE experimental pipeline
ENST00000376300.7	FLJ10996
ENST00000376300.7	MANE_select
ENST00000588733.1	454 RNA-Seq supported
ENST00000591103.1	454 RNA-Seq supported
ENST00000245787.9	MANE_select
ENST00000485520.5	QC splicing correct
ENST00000414886.5	GENCODE experimental pipeline
ENST00000669120.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661786.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000449075.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000295206.7	MANE_select
ENST00000546667.1	QC splicing correct
ENST00000327097.5	MANE_select
ENST00000272520.4	MANE_select
ENST00000393110.7	MANE_select
ENST00000454260.1	GENCODE experimental pipeline
ENST00000654197.1	Assembled from SLRseq reads (SRP049776)
ENST00000334816.12	MANE_select
ENST00000334816.12	alternative 5' UTR
ENST00000409877.5	alternative 5' UTR
ENST00000409523.1	alternative 5' UTR
ENST00000498049.1	GENCODE experimental pipeline
ENST00000409094.5	alternative 5' UTR
ENST00000306406.5	MANE_select
ENST00000019103.8	MANE_select
ENST00000457436.2	Assembled from SLRseq reads (SRP049776)
ENST00000657643.1	Assembled from SLRseq reads (SRP049776)
ENST00000413369.8	MANE_select
ENST00000413369.8	NP_001257978.1
ENST00000442513.7	alternative 5' UTR
ENST00000442513.7	non canonical TEC
ENST00000597189.1	NMD likely if extended
ENST00000443972.5	alternative 3' UTR
ENST00000401466.5	alternative 5' UTR
ENST00000445518.1	alternative 5' UTR
ENST00000272521.7	MANE_select
ENST00000263708.7	MANE_select
ENST00000420482.5	alternative 5' UTR
ENST00000263713.10	MANE_select
ENST00000331393.8	alternative 5' UTR
ENST00000443124.5	alternative 5' UTR
ENST00000489017.5	QC splicing correct
ENST00000455707.1	GENCODE experimental pipeline
ENST00000426077.3	MANE_select
ENST00000272519.10	MANE_select
ENST00000412383.5	alternative 5' UTR
ENST00000437837.1	GENCODE experimental pipeline
ENST00000295228.4	MANE_select
ENST00000655876.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413991.1	GENCODE experimental pipeline
ENST00000651018.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000667994.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667989.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432474.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432474.2	GENCODE experimental pipeline
ENST00000444963.1	GENCODE experimental pipeline
ENST00000482119.6	alternative 5' UTR
ENST00000361492.9	CAGE supported TSS
ENST00000361492.9	MANE_select
ENST00000418323.6	alternative 5' UTR
ENST00000360874.10	NMD likely if extended
ENST00000441053.1	GENCODE experimental pipeline
ENST00000432984.1	GENCODE experimental pipeline
ENST00000263707.6	MANE_select
ENST00000449975.1	alternative 5' UTR
ENST00000667483.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662168.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668016.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670491.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654001.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671498.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669018.1	Assembled from SLRseq reads (SRP049776)
ENST00000659307.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000447668.2	GENCODE experimental pipeline
ENST00000419902.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666647.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658781.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000285814.9	MANE_select
ENST00000389682.8	MANE_select
ENST00000661690.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657823.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663836.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659754.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000422649.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654814.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654341.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000422238.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438722.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651479.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000654583.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664529.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656779.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668260.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664416.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657005.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657880.1	Assembled from SLRseq reads (SRP049776)
ENST00000655733.1	Assembled from SLRseq reads (SRP049776)
ENST00000654765.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435441.1	GENCODE experimental pipeline
ENST00000432894.1	GENCODE experimental pipeline
ENST00000668625.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451749.1	GENCODE experimental pipeline
ENST00000438816.2	Assembled from SLRseq reads (SRP049776)
ENST00000438816.2	GENCODE experimental pipeline
ENST00000663071.1	Assembled from SLRseq reads (SRP049776)
ENST00000431078.1	NP_570129.1
ENST00000667791.1	Assembled from SLRseq reads (SRP049776)
ENST00000651223.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000430692.1	GENCODE experimental pipeline
ENST00000659902.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658792.1	Assembled from SLRseq reads (SRP049776)
ENST00000419223.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435352.1	GENCODE experimental pipeline
ENST00000259254.9	MANE_select
ENST00000259254.9	NP_002092.1
ENST00000409836.3	NP_058131.1
ENST00000637962.1	non canonical polymorphism
ENST00000568484.6	MANE_select
ENST00000568484.6	alternative 3' UTR
ENST00000454927.7	non canonical polymorphism
ENST00000659964.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000357970.7	NP_647594.1
ENST00000348750.8	NP_647601.1
ENST00000259238.8	NP_647596.1
ENST00000346226.7	NP_647597.1
ENST00000393041.7	NP_647599.1 isoform 7
ENST00000351659.7	NP_647595.1
ENST00000352848.7	NP_004296.1
ENST00000316724.10	MANE_select
ENST00000316724.10	NP_647593.1
ENST00000668172.1	Assembled from SLRseq reads (SRP049776)
ENST00000664447.2	MANE_select
ENST00000409327.2	alternative 5' UTR
ENST00000285398.7	LR annotation
ENST00000285398.7	MANE_select
ENST00000655875.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651019.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000344908.9	alternative 5' UTR
ENST00000409179.2	alternative 5' UTR
ENST00000654207.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654347.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000433673.1	GENCODE experimental pipeline
ENST00000657275.1	Assembled from SLRseq reads (SRP049776)
ENST00000234071.8	MANE_select
ENST00000429925.5	alternative 5' UTR
ENST00000427769.5	alternative 5' UTR
ENST00000295321.9	FLJ10006
ENST00000295321.9	MANE_select
ENST00000295321.9	NP_060439.1
ENST00000436740.1	Probable_NMD_if_extended
ENST00000454503.6	GENCODE experimental pipeline
ENST00000625659.2	non canonical TEC
ENST00000631042.2	non canonical TEC
ENST00000409816.6	NP_001073996.1
ENST00000409816.6	non-canonical splice sites between exons 36 and 37
ENST00000437387.5	alternative 5' UTR
ENST00000496841.5	non-canonical splice sites between exons 11 and 12
ENST00000409090.1	non-canonical splice sites between exons 12 and 13
ENST00000491278.5	non-canonical splice sites between exons 11 and 12
ENST00000409286.5	alternative 5' UTR
ENST00000409754.5	alternative 5' UTR
ENST00000355119.9	MANE_select
ENST00000409455.5	alternative 5' UTR
ENST00000409808.6	alternative 5' UTR
ENST00000410011.5	alternative 5' UTR
ENST00000410038.5	alternative 5' UTR
ENST00000545738.6	NP_001129509.2
ENST00000545738.6	confirm experimentally
ENST00000409254.1	alternative 5' UTR
ENST00000423019.1	alternative 5' UTR
ENST00000393018.3	alternative 5' UTR
ENST00000322313.9	MANE_select
ENST00000322313.9	NP_060853.3
ENST00000393006.5	NP_001006624.1
ENST00000409658.7	NP_001006624.1
ENST00000408998.1	alternative 5' UTR
ENST00000310981.6	MANE_select
ENST00000310981.6	NP_116129.3
ENST00000272645.9	MANE_select
ENST00000272647.10	MANE_select
ENST00000272647.10	NP_113633.2
ENST00000659745.1	Assembled from SLRseq reads (SRP049776)
ENST00000643581.2	MANE_select
ENST00000643581.2	NAGNAG splice site
ENST00000259234.10	alternative 5' UTR
ENST00000424298.5	alternative 5' UTR
ENST00000259253.11	MANE_select
ENST00000259253.11	NP_064505.1 isoform 1
ENST00000376723.7	NP_001020948.1
ENST00000259241.7	MANE_select
ENST00000412312.1	GENCODE experimental pipeline
ENST00000413403.1	GENCODE experimental pipeline
ENST00000375987.3	GENCODE experimental pipeline
ENST00000666679.1	Assembled from SLRseq reads (SRP049776)
ENST00000669319.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654914.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000450531.1	GENCODE experimental pipeline
ENST00000653281.1	Assembled from SLRseq reads (SRP049776)
ENST00000668686.1	Assembled from SLRseq reads (SRP049776)
ENST00000450840.1	GENCODE experimental pipeline
ENST00000410061.4	MANE_select
ENST00000651005.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000409914.7	MANE_select
ENST00000433507.1	GENCODE experimental pipeline
ENST00000409943.8	MANE_select
ENST00000310463.10	DKFZp434E2321
ENST00000680298.1	CAGE supported TSS
ENST00000680401.1	CAGE supported TSS
ENST00000457039.6	QC splicing correct
ENST00000441135.1	alternative 5' UTR
ENST00000651060.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000409255.1	not organism-supported
ENST00000281871.11	FLJ14346
ENST00000281871.11	MANE_select
ENST00000491178.1	QC splicing correct
ENST00000312988.9	MANE_select
ENST00000259229.7	MANE_select
ENST00000651709.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000259239.8	MANE_select
ENST00000175756.10	MANE_select
ENST00000451531.7	GENCODE experimental pipeline
ENST00000451531.7	MANE_select
ENST00000652235.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000450486.1	GENCODE experimental pipeline
ENST00000281882.8	MANE_select
ENST00000422631.1	GENCODE experimental pipeline
ENST00000409259.1	GENCODE experimental pipeline
ENST00000419965.1	GENCODE experimental pipeline
ENST00000623376.3	not best-in-genome evidence
ENST00000457169.1	GENCODE experimental pipeline
ENST00000259216.6	MANE_select
ENST00000409602.2	GENCODE experimental pipeline
ENST00000409602.2	MANE_select
ENST00000652553.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000309926.4	MANE_select
ENST00000662920.1	Assembled from SLRseq reads (SRP049776)
ENST00000448777.1	GENCODE experimental pipeline
ENST00000321420.5	FLJ38377
ENST00000321420.5	MANE_select
ENST00000431758.1	alternative 5' UTR
ENST00000458606.5	alternative 5' UTR
ENST00000429282.5	FLJ33681
ENST00000429282.5	GENCODE experimental pipeline
ENST00000660150.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000409359.7	MANE_select
ENST00000409303.6	CAGE supported TSS
ENST00000635976.1	this CDS is conserved in vertebrates
ENST00000409185.5	NP_001009993.2
ENST00000389915.4	MANE_select
ENST00000389915.4	alternative 5' UTR
ENST00000409279.1	alternative 5' UTR
ENST00000409279.1	non canonical TEC
ENST00000409279.1	upstream ATG
ENST00000437751.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663072.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668661.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668661.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000653180.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669881.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661362.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664380.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671275.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662267.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671078.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670748.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666196.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000410036.2	QC splicing correct
ENST00000309451.7	MANE_select
ENST00000321253.7	MANE_select
ENST00000295171.10	corf
ENST00000409856.8	MANE_select
ENST00000417579.1	NP_001003891.1
ENST00000652012.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000431979.1	GENCODE experimental pipeline
ENST00000437330.1	GENCODE experimental pipeline
ENST00000421696.2	GENCODE experimental pipeline
ENST00000419784.1	GENCODE experimental pipeline
ENST00000656423.1	Assembled from SLRseq reads (SRP049776)
ENST00000409867.6	MANE_select
ENST00000471048.1	GENCODE experimental pipeline
ENST00000608279.1	CAGE supported TSS
ENST00000666693.1	Assembled from SLRseq reads (SRP049776)
ENST00000657012.1	Assembled from SLRseq reads (SRP049776)
ENST00000329321.4	MANE_select
ENST00000397463.3	MANE_select
ENST00000450509.1	GENCODE experimental pipeline
ENST00000409261.6	MANE_select
ENST00000473859.1	GENCODE experimental pipeline
ENST00000358991.4	alternative 5' UTR
ENST00000651100.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000424510.1	GENCODE experimental pipeline
ENST00000454699.6	Assembled from SLRseq reads (SRP049776)
ENST00000432414.5	GENCODE experimental pipeline
ENST00000606428.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670944.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000670944.1	Assembled from SLRseq reads (SRP049776)
ENST00000420184.1	GENCODE experimental pipeline
ENST00000662423.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000281923.4	MANE_select
ENST00000281923.4	genebuild_only_MANE
ENST00000281924.6	MANE_select
ENST00000655237.1	Assembled from SLRseq reads (SRP049776)
ENST00000668300.1	Assembled from SLRseq reads (SRP049776)
ENST00000670642.1	Assembled from SLRseq reads (SRP049776)
ENST00000428857.2	Assembled from SLRseq reads (SRP049776)
ENST00000428857.2	GENCODE experimental pipeline
ENST00000356140.10	MANE_select
ENST00000264157.10	MANE_select
ENST00000437365.2	FLJ16104
ENST00000478805.1	FLJ23074
ENST00000638025.2	FLJ16628
ENST00000658678.1	NMD likely if extended
ENST00000656750.1	alternative 5' UTR
ENST00000414343.1	alternative 5' UTR
ENST00000264158.13	MANE_select
ENST00000264159.11	MANE_select
ENST00000452187.6	NMD likely if extended
ENST00000452187.6	QC splicing correct
ENST00000436436.5	QC splicing correct
ENST00000480793.1	not organism-supported
ENST00000445855.1	not organism-supported
ENST00000272638.14	MANE_select
ENST00000467065.1	not organism-supported
ENST00000264162.7	MANE_select
ENST00000437007.1	GENCODE experimental pipeline
ENST00000264156.3	MANE_select
ENST00000492091.1	not organism-supported
ENST00000264161.9	MANE_select
ENST00000441323.5	alternative 5' UTR
ENST00000449218.5	alternative 5' UTR
ENST00000463008.1	not organism-supported
ENST00000419808.5	QC splicing correct
ENST00000444406.1	GENCODE experimental pipeline
ENST00000669983.1	Assembled from SLRseq reads (SRP049776)
ENST00000596410.5	HEHD27I02HJ3Y8
ENST00000448672.1	GENCODE experimental pipeline
ENST00000241393.4	MANE_select
ENST00000409968.6	MANE_select
ENST00000409968.6	QC splicing correct
ENST00000410115.5	alternative 5' UTR
ENST00000280097.5	MANE_select
ENST00000485653.1	not organism-supported
ENST00000446520.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427150.1	not organism-supported
ENST00000280098.9	MANE_select
ENST00000420679.1	not organism-supported
ENST00000665886.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664633.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669466.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663013.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661346.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000453636.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000272641.4	MANE_select
ENST00000656547.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661894.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000421326.1	GENCODE experimental pipeline
ENST00000441935.1	not organism-supported
ENST00000449129.1	not organism-supported
ENST00000451117.1	not organism-supported
ENST00000389484.8	MANE_select
ENST00000389484.8	NP_061027
ENST00000442974.1	not organism-supported
ENST00000409512.5	alternative 5' UTR
ENST00000264170.9	MANE_select
ENST00000295095.11	MANE_select
ENST00000460776.5	QC splicing correct
ENST00000549032.5	QC splicing correct
ENST00000651074.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000658730.1	Assembled from SLRseq reads (SRP049776)
ENST00000413315.1	GENCODE experimental pipeline
ENST00000668870.1	Assembled from SLRseq reads (SRP049776)
ENST00000548756.2	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000426716.1	GENCODE experimental pipeline
ENST00000409214.5	QC splicing correct
ENST00000409214.5	alternative 5' UTR
ENST00000437114.5	alternative 5' UTR
ENST00000417450.5	alternative 5' UTR
ENST00000638007.1	CAGE supported TSS
ENST00000636413.1	CAGE supported TSS
ENST00000637045.1	CAGE supported TSS
ENST00000637304.1	CAGE supported TSS
ENST00000638128.1	CAGE supported TSS
ENST00000627532.3	MANE_select
ENST00000409487.7	alternative 5' UTR
ENST00000539609.7	NP_001165124.1
ENST00000558170.6	alternative 5' UTR
ENST00000303660.8	NAGNAG splice site
ENST00000637267.2	alternative 5' UTR
ENST00000431672.4	alternative 5' UTR
ENST00000409211.5	alternative 5' UTR
ENST00000465308.5	alternative 5' UTR
ENST00000435831.5	alternative 5' UTR
ENST00000453352.5	NMD likely if extended
ENST00000444559.5	alternative 5' UTR
ENST00000630572.2	alternative 5' UTR
ENST00000629520.2	alternative 5' UTR
ENST00000462355.2	alternative 5' UTR
ENST00000427278.8	QC splicing correct
ENST00000610265.1	nested 454 RNA-Seq supported
ENST00000475115.3	CAGE supported TSS
ENST00000413525.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654442.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653533.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661187.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666890.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667984.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670681.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654298.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000432608.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650896.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000660169.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659773.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000597655.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000631271.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668424.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671502.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671290.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671637.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670099.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666650.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658898.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653959.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664611.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655187.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661482.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652981.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657732.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653630.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653910.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666949.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662271.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000659810.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658352.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666917.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665824.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660660.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665226.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000629613.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661327.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000626325.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656353.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668319.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670869.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656881.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668441.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666826.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660827.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659777.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666180.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666980.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000664679.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654410.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000625362.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000628136.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000599187.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000631167.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000599072.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656937.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661920.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669172.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665244.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656317.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000658019.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670002.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663282.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657187.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661398.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000626197.2	non canonical TEC
ENST00000657526.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653186.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663323.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663303.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660904.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664649.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670125.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653941.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669793.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661697.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655563.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657624.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654361.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660009.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668187.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000627991.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657684.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665081.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664258.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667905.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669646.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664937.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662863.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667704.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667781.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666675.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000414256.5	QC splicing correct
ENST00000626952.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000628775.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667423.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664055.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000451478.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000596747.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671649.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000661094.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000596034.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655165.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000627545.2	NAGNAG splice site
ENST00000629251.2	non canonical U12
ENST00000662233.1	Assembled from RACEseq reads
ENST00000651680.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000418416.1	GENCODE experimental pipeline
ENST00000657021.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000414967.1	GENCODE experimental pipeline
ENST00000658876.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000656564.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655662.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667356.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654856.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000450667.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670621.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653628.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669097.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661603.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654420.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667114.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662656.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436245.2	QC splicing correct
ENST00000662284.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000404590.1	alternative 5' UTR
ENST00000241416.12	MANE_select
ENST00000392857.10	MANE_select
ENST00000488761.1	QC splicing correct
ENST00000416719.5	alternative 5' UTR
ENST00000457954.5	alternative 5' UTR
ENST00000440042.1	alternative 5' UTR
ENST00000642680.2	CAGE supported TSS
ENST00000642680.2	MANE_select
ENST00000478804.3	QC splicing correct
ENST00000496893.3	FLJ30517
ENST00000625666.1	confirm experimentally
ENST00000625973.1	confirm experimentally
ENST00000258484.11	MANE_select
ENST00000608822.1	454 RNA-Seq supported
ENST00000609886.1	454 RNA-Seq supported
ENST00000650778.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000473800.1	QC splicing correct
ENST00000409642.8	MANE_select
ENST00000409029.5	alternative 5' UTR
ENST00000498249.1	GENCODE experimental pipeline
ENST00000654444.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000409381.5	alternative 5' UTR
ENST00000334166.9	MANE_select
ENST00000414420.5	alternative 5' UTR
ENST00000651933.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000651933.1	alternative 5' UTR
ENST00000303319.10	MANE_select
ENST00000428879.5	alternative 5' UTR
ENST00000449714.1	GENCODE experimental pipeline
ENST00000655697.1	Assembled from SLRseq reads (SRP049776)
ENST00000660089.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665276.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657556.1	Assembled from SLRseq reads (SRP049776)
ENST00000658047.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000295052.3	FLJ32955
ENST00000659456.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652679.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000659082.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000665690.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000429317.1	GENCODE experimental pipeline
ENST00000375734.6	alternative 5' UTR
ENST00000263895.9	MANE_select
ENST00000454202.5	alternative 5' UTR
ENST00000439275.1	alternative 5' UTR
ENST00000416350.1	GENCODE experimental pipeline
ENST00000421624.1	GENCODE experimental pipeline
ENST00000655103.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660328.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667235.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665320.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665656.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657466.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665399.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000443811.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667037.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670597.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661012.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667502.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423428.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666939.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652947.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427615.5	GENCODE experimental pipeline
ENST00000655327.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653799.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425983.1	QC splicing correct
ENST00000409243.1	GENCODE experimental pipeline
ENST00000652733.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000331426.6	MANE_select
ENST00000243346.10	MANE_select
ENST00000414946.1	alternative 5' UTR
ENST00000243347.5	MANE_select
ENST00000453091.6	non-canonical splice donor site between exon 16 and exon 17
ENST00000428287.6	alternative 5' UTR
ENST00000428287.6	non-canonical splice donor site between exon 16 and exon 17
ENST00000444746.7	MANE_select
ENST00000444746.7	alternative 5' UTR
ENST00000444746.7	non-canonical splice donor site between exon 16 and exon 17
ENST00000243326.9	non-canonical splice donor site between exon 15 and exon 16
ENST00000414861.6	non-canonical splice donor site between exon 15 and exon 16
ENST00000414861.6	upstream_ATG-3
ENST00000430328.6	non-canonical splice donor site between exon 15 and exon 16
ENST00000397345.8	MANE_select
ENST00000413693.5	many of the exons for this gene object match in multiple places. This is why the gene object does not appear to reflect the evidence
ENST00000446896.7	NAGNAG splice site
ENST00000295087.13	MANE_select
ENST00000660385.1	Assembled from SLRseq reads (SRP049776)
ENST00000539935.7	MANE_select
ENST00000636130.1	alternative 5' UTR
ENST00000636598.1	alternative 5' UTR
ENST00000635930.1	alternative 3' UTR
ENST00000635930.1	alternative 5' UTR
ENST00000439467.6	alternative 5' UTR
ENST00000636664.1	alternative 3' UTR
ENST00000637514.1	alternative 5' UTR
ENST00000636496.1	alternative 5' UTR
ENST00000263904.5	MANE_select
ENST00000652350.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000288670.14	MANE_select
ENST00000670244.1	Assembled from SLRseq reads (SRP049776)
ENST00000650944.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000410080.8	CAGE supported TSS
ENST00000410080.8	upstream ATG
ENST00000448428.2	CAGE supported TSS
ENST00000326446.10	MANE_select
ENST00000650838.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000413043.1	GENCODE experimental pipeline
ENST00000429916.1	GENCODE experimental pipeline
ENST00000454312.1	Em:DB026818.1 not in Zmap (UCSC found)
ENST00000454312.1	GENCODE experimental pipeline
ENST00000454537.1	Em:DB442132.1 not in Zmap (UCSC found)
ENST00000424322.1	Em:DA436465.1 not in Zmap (UCSC found)
ENST00000325926.4	MANE_select
ENST00000392825.8	MANE_select
ENST00000434213.1	alternative 5' UTR
ENST00000487047.1	not organism-supported
ENST00000434635.1	GENCODE experimental pipeline
ENST00000432599.1	GENCODE experimental pipeline
ENST00000654516.1	Assembled from SLRseq reads (SRP049776)
ENST00000662205.1	Assembled from SLRseq reads (SRP049776)
ENST00000651198.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000295101.3	MANE_select
ENST00000442706.2	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000431457.1	not organism-supported
ENST00000440805.1	not organism-supported
ENST00000426217.1	not organism-supported
ENST00000662301.1	Assembled from SLRseq reads (SRP049776)
ENST00000665560.1	Assembled from SLRseq reads (SRP049776)
ENST00000666615.1	Assembled from SLRseq reads (SRP049776)
ENST00000670933.1	Assembled from SLRseq reads (SRP049776)
ENST00000668262.1	Assembled from SLRseq reads (SRP049776)
ENST00000667806.1	Assembled from SLRseq reads (SRP049776)
ENST00000661611.1	Assembled from SLRseq reads (SRP049776)
ENST00000666695.1	Assembled from SLRseq reads (SRP049776)
ENST00000653496.1	Assembled from SLRseq reads (SRP049776)
ENST00000668158.1	Assembled from SLRseq reads (SRP049776)
ENST00000663758.1	Assembled from SLRseq reads (SRP049776)
ENST00000668854.1	Assembled from SLRseq reads (SRP049776)
ENST00000662899.1	Assembled from SLRseq reads (SRP049776)
ENST00000657313.1	Assembled from SLRseq reads (SRP049776)
ENST00000669774.1	Assembled from SLRseq reads (SRP049776)
ENST00000664863.1	Assembled from SLRseq reads (SRP049776)
ENST00000663837.1	Assembled from SLRseq reads (SRP049776)
ENST00000656573.1	Assembled from SLRseq reads (SRP049776)
ENST00000660731.1	Assembled from SLRseq reads (SRP049776)
ENST00000670631.1	Assembled from SLRseq reads (SRP049776)
ENST00000658900.1	Assembled from SLRseq reads (SRP049776)
ENST00000666321.1	Assembled from SLRseq reads (SRP049776)
ENST00000663491.1	Assembled from SLRseq reads (SRP049776)
ENST00000660393.1	Assembled from SLRseq reads (SRP049776)
ENST00000663817.1	Assembled from SLRseq reads (SRP049776)
ENST00000659272.1	Assembled from SLRseq reads (SRP049776)
ENST00000661005.1	Assembled from SLRseq reads (SRP049776)
ENST00000662005.1	Assembled from SLRseq reads (SRP049776)
ENST00000655023.1	Assembled from SLRseq reads (SRP049776)
ENST00000665578.1	Assembled from SLRseq reads (SRP049776)
ENST00000663889.1	Assembled from SLRseq reads (SRP049776)
ENST00000448255.5	GENCODE experimental pipeline
ENST00000662073.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657334.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661513.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000428651.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659502.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000637476.1	NAGNAG splice site
ENST00000634100.1	CAGE supported TSS
ENST00000339562.9	MANE_select
ENST00000409572.5	QC splicing correct
ENST00000409572.5	alternative 5' UTR
ENST00000424077.1	alternative 5' UTR
ENST00000421709.1	alternative 5' UTR
ENST00000415049.5	alternative 5' UTR
ENST00000438166.7	MANE_select
ENST00000438166.7	alternative 5' UTR
ENST00000409674.5	alternative 5' UTR
ENST00000665531.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670545.1	Assembled from SLRseq reads (SRP049776)
ENST00000653962.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000259056.5	MANE_select
ENST00000410096.6	MANE_select
ENST00000410096.6	NP_065762.1
ENST00000397283.6	NP_001009959.1
ENST00000420317.5	alternative 5' UTR
ENST00000411762.5	alternative 5' UTR
ENST00000264192.8	MANE_select
ENST00000418920.5	QC splicing correct
ENST00000457793.6	QC splicing correct
ENST00000435117.1	alternative 5' UTR
ENST00000243349.13	MANE_select
ENST00000434821.7	LR annotation
ENST00000434821.7	MANE_select
ENST00000409283.6	alternative 5' UTR
ENST00000672582.1	alternative 5' UTR
ENST00000424669.6	alternative 5' UTR
ENST00000539637.6	alternative 5' UTR
ENST00000410057.6	alternative 5' UTR
ENST00000412025.5	alternative 5' UTR
ENST00000440523.5	alternative 5' UTR
ENST00000460456.1	not organism-supported
ENST00000005756.5	MANE_select
ENST00000439185.1	GENCODE experimental pipeline
ENST00000412781.2	GENCODE experimental pipeline
ENST00000283233.10	MANE_select
ENST00000491563.1	QC splicing correct
ENST00000389759.8	MANE_select
ENST00000426248.7	QC splicing correct
ENST00000480171.7	QC splicing correct
ENST00000486254.3	QC splicing correct
ENST00000342892.4	GENCODE experimental pipeline
ENST00000449526.1	GENCODE experimental pipeline
ENST00000309950.8	MANE_select
ENST00000671005.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000263635.8	MANE_select
ENST00000359774.9	MANE_select
ENST00000392796.7	alternative 5' UTR
ENST00000409990.7	alternative 5' UTR
ENST00000392783.7	MANE_select
ENST00000482503.5	alternative 5' UTR
ENST00000437839.5	alternative 5' UTR
ENST00000420020.5	GENCODE experimental pipeline
ENST00000418474.1	GENCODE experimental pipeline
ENST00000409175.6	MANE_select
ENST00000409175.6	alternative 5' UTR
ENST00000421037.1	alternative 5' UTR
ENST00000473749.1	alternative 5' UTR
ENST00000259053.6	MANE_select
ENST00000664982.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000263636.5	MANE_select
ENST00000283243.13	MANE_select
ENST00000283249.7	MANE_select
ENST00000409872.1	alternative 5' UTR
ENST00000652612.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000485635.1	CAGE supported TSS
ENST00000459712.1	CAGE supported TSS
ENST00000664835.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655410.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000348849.8	MANE_select
ENST00000409075.5	alternative 5' UTR
ENST00000409289.6	QC splicing correct
ENST00000409289.6	alternative 5' UTR
ENST00000409972.5	alternative 5' UTR
ENST00000492283.1	QC splicing correct
ENST00000428519.1	alternative 5' UTR
ENST00000425470.1	GENCODE experimental pipeline
ENST00000457887.5	QC splicing correct
ENST00000441987.5	QC splicing correct
ENST00000432692.6	QC splicing correct
ENST00000392749.7	MANE_select
ENST00000437623.1	QC splicing correct
ENST00000421122.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445372.5	GENCODE experimental pipeline
ENST00000652531.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000610254.1	454 RNA-Seq supported
ENST00000656702.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655684.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439050.1	GENCODE experimental pipeline
ENST00000436506.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000409682.8	MANE_select
ENST00000437630.1	alternative 5' UTR
ENST00000389554.8	MANE_select
ENST00000505579.1	GENCODE experimental pipeline
ENST00000446997.6	MANE_select
ENST00000665731.1	Assembled from SLRseq reads (SRP049776)
ENST00000671111.1	Assembled from SLRseq reads (SRP049776)
ENST00000678668.1	CAGE supported TSS
ENST00000360534.8	MANE_select
ENST00000360534.8	NP_001926.2
ENST00000360534.8	Swiss-Prot isoform P27487.2
ENST00000676810.1	NAGNAG splice site
ENST00000676624.1	NAGNAG splice site
ENST00000678740.1	NAGNAG splice site
ENST00000434918.6	NAGNAG splice site
ENST00000416189.6	alternative 3' UTR
ENST00000494507.2	alternative 3' UTR
ENST00000413651.3	alternative 3' UTR
ENST00000418335.1	GENCODE experimental pipeline
ENST00000670014.1	Assembled from SLRseq reads (SRP049776)
ENST00000647661.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000653718.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000418842.7	MANE_select
ENST00000609668.5	NAGNAG splice site
ENST00000418968.5	Assembled from SLRseq reads (SRP049776)
ENST00000418968.5	NAGNAG splice site
ENST00000188790.9	MANE_select
ENST00000450031.2	not organism-supported
ENST00000649979.2	CAGE supported TSS
ENST00000649979.2	LR annotation
ENST00000649979.2	MANE_select
ENST00000649554.1	LR annotation
ENST00000437150.7	MANE_select
ENST00000332142.10	Isoform 1
ENST00000332142.10	MANE_select
ENST00000446838.2	GENCODE experimental pipeline
ENST00000333129.4	MANE_select
ENST00000482917.1	not organism-supported
ENST00000666867.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000263915.8	MANE_select
ENST00000652658.2	MANE_select
ENST00000491126.6	QC splicing correct
ENST00000452626.5	CAGE supported TSS
ENST00000456693.5	QC splicing correct
ENST00000448708.5	alternative 5' UTR
ENST00000414843.5	alternative 5' UTR
ENST00000480873.1	CAGE supported TSS
ENST00000670672.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670672.1	Assembled from SLRseq reads (SRP049776)
ENST00000665748.1	Assembled from SLRseq reads (SRP049776)
ENST00000662281.1	Assembled from SLRseq reads (SRP049776)
ENST00000671488.1	Assembled from SLRseq reads (SRP049776)
ENST00000629817.2	non canonical TEC
ENST00000409662.5	alternative 5' UTR
ENST00000424914.1	not organism-supported
ENST00000283254.12	MANE_select
ENST00000453007.1	alternative 5' UTR
ENST00000424833.5	alternative 5' UTR
ENST00000424833.5	non canonical U12
ENST00000375437.7	MANE_select
ENST00000375437.7	genebuild_only_MANE
ENST00000636071.2	alternative 5' UTR
ENST00000631182.2	NP_001035233.1
ENST00000631182.2	non canonical U12
ENST00000637266.2	alternative 5' UTR
ENST00000283256.10	NP_066287.2
ENST00000283256.10	non canonical U12
ENST00000480032.4	non canonical U12
ENST00000667993.1	Assembled from SLRseq reads (SRP049776)
ENST00000421875.5	alternative 5' UTR
ENST00000409664.5	alternative 5' UTR
ENST00000651982.1	MANE_select
ENST00000651982.1	genebuild_only_MANE
ENST00000392701.8	MANE_select
ENST00000412248.5	alternative 5' UTR
ENST00000431484.1	alternative 5' UTR
ENST00000414977.5	alternative 5' UTR
ENST00000422973.1	alternative 5' UTR
ENST00000447156.1	alternative 5' UTR
ENST00000425688.1	GENCODE experimental pipeline
ENST00000428888.1	GENCODE experimental pipeline
ENST00000457108.1	GENCODE experimental pipeline
ENST00000243344.8	MANE_select
ENST00000440322.5	GENCODE experimental pipeline
ENST00000671284.1	Assembled from SLRseq reads (SRP049776)
ENST00000658447.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000447809.2	GENCODE experimental pipeline
ENST00000657189.1	Assembled from SLRseq reads (SRP049776)
ENST00000668514.1	Assembled from SLRseq reads (SRP049776)
ENST00000671220.1	Assembled from SLRseq reads (SRP049776)
ENST00000660239.1	Assembled from SLRseq reads (SRP049776)
ENST00000670867.1	Assembled from SLRseq reads (SRP049776)
ENST00000668610.1	Assembled from SLRseq reads (SRP049776)
ENST00000660342.1	Assembled from SLRseq reads (SRP049776)
ENST00000641575.1	NAGNAG splice site
ENST00000303395.9	CAGE supported TSS
ENST00000303395.9	non canonical U12
ENST00000674923.1	CAGE supported TSS
ENST00000674923.1	MANE_select
ENST00000674923.1	alternative 5' UTR
ENST00000637988.1	alternative 5' UTR
ENST00000635750.1	alternative 5' UTR
ENST00000375405.7	non canonical U12
ENST00000375405.7	sodium channel protein, brain i alpha subunit
ENST00000409050.1	non canonical U12
ENST00000473295.2	non canonical U12
ENST00000637285.2	alternative 5' UTR
ENST00000642356.2	MANE_select
ENST00000642356.2	alternative 5' UTR
ENST00000642356.2	non canonical U12
ENST00000409672.5	non canonical U12
ENST00000303354.11	non canonical U12
ENST00000645907.1	Supported by Swiss-Prot isoform Q15858-4.3
ENST00000645907.1	non canonical U12
ENST00000644316.1	non canonical U12
ENST00000409435.6	confirm experimentally
ENST00000409435.6	non canonical U12
ENST00000454569.6	non canonical U12
ENST00000452182.2	alternative 5' UTR
ENST00000452182.2	non canonical U12
ENST00000643258.1	CAGE supported TSS
ENST00000643258.1	LR annotation
ENST00000643258.1	MANE_select
ENST00000643258.1	non canonical U12
ENST00000441411.2	alternative 5' UTR
ENST00000650747.1	CAGE supported TSS
ENST00000409195.6	MANE_select
ENST00000409195.6	NP_689594.4
ENST00000409043.5	NP_001073278.1
ENST00000409728.5	NP_001186072.1
ENST00000409605.1	NP_001186074.1
ENST00000409273.6	NP_001186073.1
ENST00000430546.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430546.2	GENCODE experimental pipeline
ENST00000657553.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670221.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436982.2	QC splicing correct
ENST00000654994.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000355999.5	MANE_select
ENST00000305747.11	MANE_select
ENST00000669918.1	Assembled from RACEseq reads
ENST00000425636.6	GENCODE experimental pipeline
ENST00000458381.6	alternative 5' UTR
ENST00000317647.12	MANE_select
ENST00000282074.7	MANE_select
ENST00000451987.5	alternative 5' UTR
ENST00000375363.8	MANE_select
ENST00000650372.1	LR annotation
ENST00000650372.1	MANE_select
ENST00000602501.5	alternative 5' UTR
ENST00000602501.5	non canonical TEC
ENST00000428522.5	alternative 5' UTR
ENST00000450153.1	alternative 5' UTR
ENST00000674881.1	MANE_select
ENST00000436483.6	alternative 5' UTR
ENST00000432133.1	GENCODE experimental pipeline
ENST00000649046.1	LR annotation
ENST00000649046.1	MANE_select
ENST00000649153.1	LR annotation
ENST00000295240.8	MANE_select
ENST00000284669.2	MANE_select
ENST00000453153.7	MANE_select
ENST00000445210.1	alternative 5' UTR
ENST00000414307.6	align_id:3654943|asmbl_145108
ENST00000679324.1	align_id:1334974|asmbl_54877
ENST00000433207.6	align_id:3654934|asmbl_145099
ENST00000677392.1	align_id:3654937|asmbl_145102
ENST00000676508.1	upstream ATG
ENST00000260970.8	MANE_select
ENST00000678695.1	align_id:3654944|asmbl_145109
ENST00000530152.5	NMD likely if extended
ENST00000676557.1	align_id:3654951|asmbl_145116
ENST00000677750.1	align_id:3654946|asmbl_145111
ENST00000678721.1	align_id:3654938|asmbl_145103
ENST00000676756.1	alternative 5' UTR
ENST00000679107.1	alternative 5' UTR
ENST00000678499.1	align_id:3654933|asmbl_145098
ENST00000678499.1	alternative 5' UTR
ENST00000448752.7	align_id:1334977|asmbl_54880
ENST00000417938.2	QC splicing correct
ENST00000482772.5	QC splicing correct
ENST00000447353.6	MANE_select
ENST00000359744.8	MANE_select
ENST00000438838.5	alternative 5' UTR
ENST00000449906.5	alternative 5' UTR
ENST00000272797.8	alternative 5' UTR
ENST00000392647.7	MANE_select
ENST00000422006.5	alternative 5' UTR
ENST00000260956.9	MANE_select
ENST00000409333.1	alternative 5' UTR
ENST00000260953.10	MANE_select
ENST00000409965.5	alternative 5' UTR
ENST00000392640.6	alternative 5' UTR
ENST00000272793.11	CAGE supported TSS
ENST00000272793.11	MANE_select
ENST00000272793.11	non canonical conserved
ENST00000438642.6	NMD likely if extended
ENST00000408978.9	MANE_select
ENST00000602629.1	non canonical TEC
ENST00000630561.3	Assembled from RACEseq reads
ENST00000609666.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000609890.5	NAGNAG splice site
ENST00000428156.1	GENCODE experimental pipeline
ENST00000662274.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671292.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661242.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661242.1	Assembled from SLRseq reads (SRP049776)
ENST00000662804.1	Assembled from SLRseq reads (SRP049776)
ENST00000442456.4	GENCODE experimental pipeline
ENST00000666793.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670147.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666740.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654815.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665361.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666583.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655289.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654500.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667568.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664115.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000623667.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000375281.4	MANE_select
ENST00000669009.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661942.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654532.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671618.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662201.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662915.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663834.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664870.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670985.1	Assembled from SLRseq reads (SRP049776)
ENST00000653024.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426475.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663589.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000454603.5	alternative 5' UTR
ENST00000445006.5	alternative 5' UTR
ENST00000358196.8	MANE_select
ENST00000344257.9	isoform 2
ENST00000455008.5	alternative 5' UTR
ENST00000456864.5	alternative 5' UTR
ENST00000429023.1	not organism-supported
ENST00000663207.1	Assembled from SLRseq reads (SRP049776)
ENST00000418106.1	GENCODE experimental pipeline
ENST00000655227.1	Assembled from SLRseq reads (SRP049776)
ENST00000651809.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000234160.5	MANE_select
ENST00000431350.7	MANE_select
ENST00000413010.5	NMD likely if extended
ENST00000375258.8	Protein truncated due to SNP (rs10205459)
ENST00000447486.5	FLJ13984
ENST00000483284.5	FLJ35899
ENST00000453846.5	alternative 5' UTR
ENST00000375255.8	FLJ13096
ENST00000375255.8	MANE_select
ENST00000321348.9	MANE_select
ENST00000474182.1	QC splicing correct
ENST00000452242.5	alternative 5' UTR
ENST00000340296.8	alternative 5' UTR
ENST00000397119.8	MANE_select
ENST00000397119.8	alternative 5' UTR
ENST00000410079.7	alternative 5' UTR
ENST00000438879.5	alternative 5' UTR
ENST00000435234.5	alternative 5' UTR
ENST00000443458.5	alternative 5' UTR
ENST00000412370.5	alternative 5' UTR
ENST00000423910.5	alternative 5' UTR
ENST00000425485.5	alternative 5' UTR
ENST00000430778.5	alternative 5' UTR
ENST00000422440.7	MANE_select
ENST00000264108.5	MANE_select
ENST00000315796.5	MANE_select
ENST00000392582.2	QC splicing correct
ENST00000361609.4	alternative 5' UTR
ENST00000469444.6	alternative 5' UTR
ENST00000361725.5	MANE_select
ENST00000234198.9	FLJ75693
ENST00000234198.9	MANE_select
ENST00000448117.1	GENCODE experimental pipeline
ENST00000667725.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662340.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657632.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671082.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445613.1	GENCODE experimental pipeline
ENST00000662764.1	Assembled from SLRseq reads (SRP049776)
ENST00000668498.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000264107.11	Cell type-specific integrin variants with alternative alpha chain cytoplasmic domains
ENST00000409080.6	MANE_select
ENST00000409080.6	isoform a precursor
ENST00000458314.1	GENCODE experimental pipeline
ENST00000436922.1	GENCODE experimental pipeline
ENST00000282077.8	MANE_select
ENST00000455435.1	GENCODE experimental pipeline
ENST00000397081.8	AT-AC splicing at exons 17 and 18
ENST00000397081.8	MANE_select
ENST00000409036.5	non canonical U12
ENST00000409176.6	alternative 5' UTR
ENST00000375213.8	MANE_select
ENST00000422149.1	alternative 5' UTR
ENST00000423106.2	GENCODE experimental pipeline
ENST00000306721.8	MANE_select
ENST00000418620.1	GENCODE experimental pipeline
ENST00000609273.1	CAGE supported TSS
ENST00000284719.8	MANE_select
ENST00000427472.2	alternative 5' UTR
ENST00000394967.3	MANE_select
ENST00000342016.8	MANE_select
ENST00000472169.1	GENCODE experimental pipeline
ENST00000272732.11	MANE_select
ENST00000458563.5	alternative 5' UTR
ENST00000435964.1	alternative 5' UTR
ENST00000424069.5	alternative 5' UTR
ENST00000427038.5	alternative 5' UTR
ENST00000548031.1	alternative 5' UTR
ENST00000392552.7	MANE_select
ENST00000392551.6	alternative 5' UTR
ENST00000295500.8	alternative 5' UTR
ENST00000661056.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000417038.1	GENCODE experimental pipeline
ENST00000442996.1	GENCODE experimental pipeline
ENST00000657063.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000654673.1	Assembled from SLRseq reads (SRP049776)
ENST00000679041.1	MANE_select
ENST00000359761.7	alternative 5' UTR
ENST00000392546.6	alternative 5' UTR
ENST00000467149.1	not organism-supported
ENST00000436221.1	alternative 5' UTR
ENST00000469002.1	not organism-supported
ENST00000454203.1	GENCODE experimental pipeline
ENST00000348749.9	CAGE supported TSS
ENST00000348749.9	LR annotation
ENST00000348749.9	MANE_select
ENST00000636168.2	upstream ATG
ENST00000416004.1	GENCODE experimental pipeline
ENST00000409900.9	CAGE supported TSS
ENST00000409900.9	LR annotation
ENST00000409900.9	MANE_select
ENST00000295497.12	CAGE supported TSS
ENST00000295497.12	LR annotation
ENST00000443238.6	CAGE supported TSS
ENST00000409597.5	CAGE supported TSS
ENST00000413882.6	CAGE supported TSS
ENST00000651246.1	CAGE supported TSS
ENST00000651373.1	CAGE supported TSS
ENST00000652674.1	CAGE supported TSS
ENST00000651315.1	CAGE supported TSS
ENST00000652756.1	CAGE supported TSS
ENST00000490654.1	CAGE supported TSS
ENST00000264110.7	MANE_select
ENST00000409635.5	alternative 5' UTR
ENST00000392544.5	alternative 5' UTR
ENST00000415955.5	alternative 5' UTR
ENST00000437522.5	alternative 5' UTR
ENST00000449168.1	GENCODE experimental pipeline
ENST00000284727.9	MANE_select
ENST00000409194.5	alternative 5' UTR
ENST00000392541.3	alternative 5' UTR
ENST00000438963.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653625.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000453206.1	GENCODE experimental pipeline
ENST00000458254.1	GENCODE experimental pipeline
ENST00000272748.9	MANE_select
ENST00000445472.1	alternative 5' UTR
ENST00000466445.1	alternative 5' UTR
ENST00000308618.4	not organism-supported
ENST00000392539.4	MANE_select
ENST00000406506.4	MANE_select
ENST00000406506.4	NP_067016
ENST00000249504.7	MANE_select
ENST00000249501.5	MANE_select
ENST00000651440.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000249499.8	MANE_select
ENST00000429017.2	NAGNAG splice site
ENST00000313173.6	MANE_select
ENST00000313173.6	NAGNAG splice site
ENST00000544999.2	NAGNAG splice site
ENST00000450510.2	NAGNAG splice site
ENST00000432796.2	alternative 5' UTR
ENST00000410016.5	alternative 5' UTR
ENST00000306324.4	MANE_select
ENST00000669485.1	Assembled from SLRseq reads (SRP049776)
ENST00000416928.8	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000643050.2	Assembled from SLRseq reads (SRP049776)
ENST00000642267.2	Assembled from SLRseq reads (SRP049776)
ENST00000426615.3	CAGE supported TSS
ENST00000331462.6	MANE_select
ENST00000249442.11	MANE_select
ENST00000249442.11	isoform a
ENST00000652995.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000443670.1	GENCODE experimental pipeline
ENST00000652227.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000412153.1	GENCODE experimental pipeline
ENST00000431455.1	GENCODE experimental pipeline
ENST00000295549.9	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000295549.9	GENCODE experimental pipeline
ENST00000339037.4	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658669.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655532.1	Assembled from SLRseq reads (SRP049776)
ENST00000657778.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652997.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664565.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000653543.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655213.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659350.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659978.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671406.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662881.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661615.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667564.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670644.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661320.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661632.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661910.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000457756.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665208.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000432925.1	GENCODE experimental pipeline
ENST00000665720.1	Assembled from SLRseq reads (SRP049776)
ENST00000667621.1	Assembled from SLRseq reads (SRP049776)
ENST00000653899.1	Assembled from SLRseq reads (SRP049776)
ENST00000657989.1	Assembled from SLRseq reads (SRP049776)
ENST00000659269.1	Assembled from SLRseq reads (SRP049776)
ENST00000670819.1	Assembled from SLRseq reads (SRP049776)
ENST00000659683.1	Assembled from SLRseq reads (SRP049776)
ENST00000658626.1	Assembled from SLRseq reads (SRP049776)
ENST00000668465.1	Assembled from SLRseq reads (SRP049776)
ENST00000455416.1	GENCODE experimental pipeline
ENST00000654107.1	Assembled from SLRseq reads (SRP049776)
ENST00000679159.1	align_id:3655787|asmbl_145952
ENST00000677043.1	align_id:3655841|asmbl_146006
ENST00000676629.1	align_id:3655830|asmbl_145995
ENST00000677337.1	align_id:3655833|asmbl_145998
ENST00000676488.1	align_id:3655831|asmbl_145996
ENST00000678421.1	align_id:3655793|asmbl_145958
ENST00000677863.1	align_id:3655799|asmbl_145964
ENST00000676681.1	align_id:3655832|asmbl_145997
ENST00000678111.1	align_id:3655826|asmbl_145991
ENST00000676762.1	align_id:3655798|asmbl_145963
ENST00000676874.1	align_id:3655828|asmbl_145993
ENST00000483137.2	align_id:3655858|asmbl_146023
ENST00000676736.1	align_id:3655797|asmbl_145962
ENST00000677508.1	align_id:3655795|asmbl_145960
ENST00000679328.1	CAGE supported TSS
ENST00000679328.1	HsBN_lib7:Read_59884-Barcode%3DBC358:length%3D2227
ENST00000397062.8	MANE_select
ENST00000397057.6	DKFZp451M2119
ENST00000453859.2	not organism-supported
ENST00000680705.1	align_id:3655878|asmbl_146043
ENST00000680770.1	align_id:3655876|asmbl_146041
ENST00000637633.2	align_id:3655879|asmbl_146044
ENST00000679459.1	align_id:3655880|asmbl_146045
ENST00000681752.1	align_id:3655844|asmbl_146009
ENST00000460342.2	align_id:3655884|asmbl_146049
ENST00000680677.1	align_id:3655891|asmbl_146056
ENST00000680910.1	align_id:3655881|asmbl_146046
ENST00000680893.1	align_id:3655849|asmbl_146014
ENST00000681032.1	align_id:3655851|asmbl_146016
ENST00000679421.1	align_id:3655850|asmbl_146015
ENST00000681565.1	align_id:3655854|asmbl_146019
ENST00000264167.11	CAGE supported TSS
ENST00000264167.11	MANE_select
ENST00000680155.1	align_id:3655840|asmbl_146005
ENST00000679478.1	align_id:3655839|asmbl_146004
ENST00000681891.1	align_id:3655856|asmbl_146021
ENST00000679639.1	align_id:3655882|asmbl_146047
ENST00000681028.1	align_id:3655871|asmbl_146036
ENST00000680028.1	align_id:3655852|asmbl_146017
ENST00000680390.1	align_id:1335381|asmbl_55284
ENST00000681300.1	align_id:1335382|asmbl_55285
ENST00000408939.4	MANE_select
ENST00000357045.4	GENCODE experimental pipeline
ENST00000355689.6	FLJ13946
ENST00000355689.6	MANE_select
ENST00000286063.11	MANE_select
ENST00000478646.5	QC splicing correct
ENST00000433879.1	not organism-supported
ENST00000492761.1	not organism-supported
ENST00000653062.1	Assembled from SLRseq reads (SRP049776)
ENST00000450227.1	GENCODE experimental pipeline
ENST00000457053.1	GENCODE experimental pipeline
ENST00000286070.10	5' extended using BI763677.1 in order to match NM_152945.3. Select work, Sep 2018
ENST00000286070.10	MANE_select
ENST00000190611.9	MANE_select
ENST00000453026.7	Assembled from SLRseq reads (SRP049776)
ENST00000665039.1	Assembled from SLRseq reads (SRP049776)
ENST00000666480.1	Assembled from SLRseq reads (SRP049776)
ENST00000663803.1	Assembled from SLRseq reads (SRP049776)
ENST00000661271.1	Assembled from SLRseq reads (SRP049776)
ENST00000659708.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660374.1	Assembled from SLRseq reads (SRP049776)
ENST00000668138.1	Assembled from SLRseq reads (SRP049776)
ENST00000436616.3	Assembled from SLRseq reads (SRP049776)
ENST00000662743.1	Assembled from SLRseq reads (SRP049776)
ENST00000671679.1	Assembled from RACEseq reads
ENST00000671256.1	Assembled from SLRseq reads (SRP049776)
ENST00000325748.9	MANE_select
ENST00000642492.1	alternative 5' UTR
ENST00000644580.2	CAGE supported TSS
ENST00000644580.2	LR annotation
ENST00000644580.2	MANE_select
ENST00000645817.1	alternative 5' UTR
ENST00000644554.1	upstream ATG
ENST00000647226.1	upstream ATG
ENST00000642192.1	alternative 5' UTR
ENST00000375129.8	alternative 5' UTR
ENST00000424785.7	MANE_select
ENST00000234453.10	MANE_select
ENST00000657210.1	Assembled from SLRseq reads (SRP049776)
ENST00000585487.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000442329.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664161.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664161.1	Assembled from SLRseq reads (SRP049776)
ENST00000659121.1	Assembled from SLRseq reads (SRP049776)
ENST00000456053.5	non canonical other
ENST00000590773.6	Assembled from SLRseq reads (SRP049776)
ENST00000586707.6	Assembled from SLRseq reads (SRP049776)
ENST00000592750.5	non canonical U12
ENST00000592600.6	Assembled from SLRseq reads (SRP049776)
ENST00000653807.1	Assembled from RACEseq reads
ENST00000657023.1	Assembled from SLRseq reads (SRP049776)
ENST00000588244.5	non canonical conserved
ENST00000591466.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000588716.5	non canonical conserved
ENST00000671355.1	Assembled from SLRseq reads (SRP049776)
ENST00000627527.1	non canonical TEC
ENST00000418062.1	GENCODE experimental pipeline
ENST00000582847.6	Assembled from SLRseq reads (SRP049776)
ENST00000610005.1	nested 454 RNA-Seq supported
ENST00000664776.1	Assembled from SLRseq reads (SRP049776)
ENST00000657818.1	Assembled from RACEseq reads
ENST00000663178.1	Assembled from SLRseq reads (SRP049776)
ENST00000342992.10	QC splicing correct
ENST00000460472.6	QC splicing correct
ENST00000589042.5	MANE_select
ENST00000589042.5	NM_001267550.1
ENST00000591111.5	NM_001256850.1
ENST00000591111.5	possible cardiac titin N2BA, though exons 128-130, 136-140, 144, 145, 150-152 have little or no evidence for cardiac expression according to PMID: 22335739
ENST00000425332.2	QC splicing correct
ENST00000360870.10	NM_133379.3
ENST00000412264.1	alternative 5' UTR
ENST00000412264.1	upstream ATG
ENST00000652826.1	Assembled from SLRseq reads (SRP049776)
ENST00000667123.1	Assembled from SLRseq reads (SRP049776)
ENST00000667180.1	Assembled from SLRseq reads (SRP049776)
ENST00000657712.1	Assembled from SLRseq reads (SRP049776)
ENST00000443758.6	NP_775919.3
ENST00000428443.8	MANE_select
ENST00000335289.5	not organism-supported
ENST00000440010.5	alternative 5' UTR
ENST00000435047.5	alternative 5' UTR
ENST00000419129.1	GENCODE experimental pipeline
ENST00000410066.7	MANE_select
ENST00000336917.9	alternative 5' UTR
ENST00000409343.5	upstream_ATG-15
ENST00000451732.6	alternative 5' UTR
ENST00000438871.2	alternative 5' UTR
ENST00000410053.8	MANE_select
ENST00000429816.1	Em:CF140309.1
ENST00000429816.1	GENCODE experimental pipeline
ENST00000629145.1	Iyer MK et al. (2015) PMID:25599403
ENST00000629145.1	Prensner, J. R. et al. (2013) PMID: 24076601
ENST00000624183.1	possible genomic contamination - see ESTs
ENST00000602303.5	alternative 5' UTR
ENST00000602959.5	alternative 5' UTR
ENST00000602479.5	alternative 5' UTR
ENST00000602291.5	alternative 5' UTR
ENST00000410062.9	MANE_select
ENST00000602499.5	alternative 5' UTR
ENST00000602710.5	QC splicing correct
ENST00000602710.5	alternative 5' UTR
ENST00000456895.1	GENCODE experimental pipeline
ENST00000435411.6	FLJ43011
ENST00000669843.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000645719.1	CAGE supported TSS
ENST00000654567.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671084.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656623.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654342.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659181.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456446.1	GENCODE experimental pipeline
ENST00000397033.7	MANE_select
ENST00000410087.8	MANE_select
ENST00000295108.4	MANE_select
ENST00000440371.1	GENCODE experimental pipeline
ENST00000449835.1	GENCODE experimental pipeline
ENST00000431877.7	MANE_select
ENST00000467172.2	QC splicing correct
ENST00000410103.1	alternative 5' UTR
ENST00000482782.5	alternative 5' UTR
ENST00000495511.1	alternative 5' UTR
ENST00000652952.1	Assembled from SLRseq reads (SRP049776)
ENST00000679526.1	long_read_pipeline_2
ENST00000680258.1	align_id:3656318|asmbl_146483
ENST00000680258.1	long_read_pipeline_2
ENST00000679491.1	align_id:3656349|asmbl_146514
ENST00000680667.1	align_id:3656333|asmbl_146498
ENST00000264065.12	MANE_select
ENST00000680480.1	align_id:3656308|asmbl_146473
ENST00000681873.1	align_id:3656332|asmbl_146497
ENST00000680060.1	align_id:3656315|asmbl_146480
ENST00000681139.1	align_id:3656310|asmbl_146475
ENST00000681146.1	align_id:3656305|asmbl_146470
ENST00000650903.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000680484.1	align_id:3656316|asmbl_146481
ENST00000640034.2	align_id:1335599|asmbl_55502align_id:1335599|asmbl_55502
ENST00000680648.1	align_id:3656363|asmbl_146528
ENST00000681122.1	align_id:3656334|asmbl_146499
ENST00000295113.5	MANE_select
ENST00000361354.9	MANE_select
ENST00000471640.1	QC splicing correct
ENST00000354221.5	MANE_select
ENST00000442895.6	alternative 5' UTR
ENST00000446612.5	alternative 5' UTR
ENST00000472844.1	alternative 5' UTR
ENST00000455063.5	alternative 5' UTR
ENST00000295119.9	MANE_select
ENST00000661621.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608537.2	Extended 5' and 3' ends with assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000653710.1	Assembled from SLRseq reads (SRP049776)
ENST00000658526.1	Assembled from SLRseq reads (SRP049776)
ENST00000441026.1	GENCODE experimental pipeline
ENST00000653932.1	Assembled from SLRseq reads (SRP049776)
ENST00000652637.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000671393.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000302277.7	MANE_select
ENST00000655441.1	Assembled from RACEseq reads
ENST00000671641.1	Assembled from RACEseq reads
ENST00000667756.1	Assembled from SLRseq reads (SRP049776)
ENST00000436557.5	GENCODE experimental pipeline
ENST00000421998.5	GENCODE experimental pipeline
ENST00000427269.2	QC splicing correct
ENST00000424728.6	MANE_select
ENST00000415915.5	FLJ44048
ENST00000658772.1	Assembled from SLRseq reads (SRP049776)
ENST00000656786.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669598.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668977.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668985.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667839.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670612.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655126.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658990.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658984.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666677.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661574.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671116.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665629.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665629.1	GENCODE experimental pipeline
ENST00000667983.1	Assembled from SLRseq reads (SRP049776)
ENST00000419719.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667056.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671599.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427108.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659769.1	Assembled from SLRseq reads (SRP049776)
ENST00000659351.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000337859.11	MANE_select
ENST00000496289.1	QC splicing correct
ENST00000261023.8	MANE_select
ENST00000474571.1	not organism-supported
ENST00000453665.1	GENCODE experimental pipeline
ENST00000304698.10	Isoform 1
ENST00000304698.10	MANE_select
ENST00000295131.3	MANE_select
ENST00000412276.6	Assembled from SLRseq reads (SRP049776)
ENST00000392370.8	MANE_select
ENST00000409998.5	alternative 5' UTR
ENST00000410068.5	alternative 5' UTR
ENST00000447403.5	alternative 5' UTR
ENST00000233156.9	MANE_select
ENST00000233156.9	alternative 5' UTR
ENST00000409676.5	alternative 5' UTR
ENST00000437725.5	alternative 5' UTR
ENST00000421427.5	Em:CD654414.1
ENST00000421427.5	alternative 5' UTR
ENST00000453013.5	alternative 5' UTR
ENST00000417013.5	alternative 5' UTR
ENST00000420747.1	alternative 5' UTR
ENST00000434418.2	GENCODE experimental pipeline
ENST00000409830.6	MANE_select
ENST00000409830.6	alternative 5' UTR
ENST00000409927.5	alternative 5' UTR
ENST00000409580.5	alternative 5' UTR
ENST00000409637.7	alternative 5' UTR
ENST00000409609.5	alternative 5' UTR
ENST00000431708.1	GENCODE experimental pipeline
ENST00000304636.9	CAGE supported TSS
ENST00000304636.9	LR annotation
ENST00000304636.9	MANE_select
ENST00000374866.9	LR annotation
ENST00000374866.9	MANE_select
ENST00000419029.1	GENCODE experimental pipeline
ENST00000314761.9	MANE_select
ENST00000658989.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000261024.7	MANE_select
ENST00000427241.5	alternative 5' UTR
ENST00000427419.5	alternative 5' UTR
ENST00000425590.1	alternative 5' UTR
ENST00000260952.9	MANE_select
ENST00000420250.1	alternative 5' UTR
ENST00000607829.6	MANE_select
ENST00000441800.5	alternative 5' UTR
ENST00000264151.10	MANE_select
ENST00000522700.5	alternative 5' UTR
ENST00000517895.5	alternative 5' UTR
ENST00000521630.1	alternative 5' UTR
ENST00000392349.9	MANE_select
ENST00000392349.9	alternative 5' UTR
ENST00000325795.7	alternative 5' UTR
ENST00000442547.5	alternative 5' UTR
ENST00000458355.1	alternative 5' UTR
ENST00000441310.7	MANE_select
ENST00000446877.5	alternative 5' UTR
ENST00000424766.5	alternative 5' UTR
ENST00000420421.1	alternative 5' UTR
ENST00000450357.5	alternative 5' UTR
ENST00000396974.2	NP_001035986.1
ENST00000409545.2	NP_001035985.1
ENST00000409545.2	alternative 5' UTR
ENST00000409870.1	alternative 5' UTR
ENST00000340623.4	MANE_select
ENST00000340623.4	NP_001035984.1
ENST00000340623.4	alternative 5' UTR
ENST00000443551.2	NP_115697.2
ENST00000443551.2	alternative 5' UTR
ENST00000260950.5	MANE_select
ENST00000399855.2	alternative 3' UTR
ENST00000359678.10	MANE_select
ENST00000392329.7	MANE_select
ENST00000392329.7	genebuild_only_MANE
ENST00000430311.5	alternative 5' UTR
ENST00000413239.5	alternative 5' UTR
ENST00000431594.5	alternative 5' UTR
ENST00000444194.5	alternative 5' UTR
ENST00000458647.5	alternative 5' UTR
ENST00000423767.5	alternative 5' UTR
ENST00000451089.1	alternative 5' UTR
ENST00000409027.1	alternative 5' UTR
ENST00000458193.1	alternative 5' UTR
ENST00000417958.5	alternative 5' UTR
ENST00000432036.5	alternative 5' UTR
ENST00000392328.6	FLJ20160
ENST00000392328.6	MANE_select
ENST00000409150.8	MANE_select
ENST00000457407.2	Assembled from SLRseq reads (SRP049776)
ENST00000457407.2	GENCODE experimental pipeline
ENST00000448811.1	alternative 5' UTR
ENST00000416973.1	alternative 5' UTR
ENST00000426601.1	alternative 5' UTR
ENST00000409581.5	alternative 5' UTR
ENST00000337386.10	MANE_select
ENST00000423376.1	alternative 5' UTR
ENST00000421437.1	QC splicing correct
ENST00000413911.1	GENCODE experimental pipeline
ENST00000320717.8	MANE_select
ENST00000361099.8	MANE_select
ENST00000540176.6	alternative 5' UTR
ENST00000673858.1	alternative 3' UTR
ENST00000673942.1	alternative 5' UTR
ENST00000409465.5	alternative 5' UTR
ENST00000673841.1	alternative 5' UTR
ENST00000454414.5	alternative 5' UTR
ENST00000432058.1	alternative 5' UTR
ENST00000431351.1	GENCODE experimental pipeline
ENST00000456176.5	GENCODE experimental pipeline
ENST00000392320.7	MANE_select
ENST00000392320.7	alternative 5' UTR
ENST00000450994.1	alternative 5' UTR
ENST00000658263.1	Assembled from RACEseq reads
ENST00000419640.1	GENCODE experimental pipeline
ENST00000418908.5	alternative 5' UTR
ENST00000339514.8	NP_036355.2
ENST00000392318.8	MANE_select
ENST00000392318.8	alternative 5' UTR
ENST00000438652.5	alternative 5' UTR
ENST00000451437.5	alternative 5' UTR
ENST00000420448.1	alternative 5' UTR
ENST00000425611.9	MANE_select
ENST00000674172.1	alternative 3' UTR
ENST00000674360.1	alternative 3' UTR
ENST00000674406.1	alternative 3' UTR
ENST00000409510.5	alternative 5' UTR
ENST00000413304.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662222.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662222.1	XP_001129762.1
ENST00000658553.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000304141.5	MANE_select
ENST00000424116.6	GENCODE experimental pipeline
ENST00000428980.6	GENCODE experimental pipeline
ENST00000609865.1	CAGE supported TSS
ENST00000609952.1	nested 454 RNA-Seq supported
ENST00000595918.2	454 RNA-Seq supported
ENST00000595918.2	nested 454 RNA-Seq supported
ENST00000272771.10	MANE_select
ENST00000422017.1	GENCODE experimental pipeline
ENST00000652985.1	Assembled from SLRseq reads (SRP049776)
ENST00000654615.1	Assembled from SLRseq reads (SRP049776)
ENST00000661930.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000419786.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668090.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659759.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660800.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659259.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438505.5	GENCODE experimental pipeline
ENST00000653550.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653550.1	Assembled from SLRseq reads (SRP049776)
ENST00000655549.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656546.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653542.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650872.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000654688.1	Assembled from SLRseq reads (SRP049776)
ENST00000665990.1	Assembled from SLRseq reads (SRP049776)
ENST00000447194.1	GENCODE experimental pipeline
ENST00000413290.1	GENCODE experimental pipeline
ENST00000670658.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665031.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671559.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667270.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000458054.1	alternative 5' UTR
ENST00000409086.7	alternative 5' UTR
ENST00000412905.1	alternative 5' UTR
ENST00000359634.10	MANE_select
ENST00000418005.1	alternative 5' UTR
ENST00000312428.11	MANE_select
ENST00000263955.9	MANE_select
ENST00000409228.5	alternative 5' UTR
ENST00000420683.1	alternative 5' UTR
ENST00000449152.1	alternative 5' UTR
ENST00000644978.2	MANE_select
ENST00000644978.2	alternative 5' UTR
ENST00000647236.1	CAGE supported TSS
ENST00000644256.1	alternative 5' UTR
ENST00000647314.1	NMD likely if extended
ENST00000642531.1	NMD likely if extended
ENST00000427457.2	alternative 5' UTR
ENST00000389175.9	MANE_select
ENST00000389175.9	QC splicing correct
ENST00000263956.8	MANE_select
ENST00000651042.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000451088.6	GENCODE experimental pipeline
ENST00000342506.4	MANE_select
ENST00000342506.4	upstream ATG
ENST00000354764.9	MANE_select
ENST00000282272.15	MANE_select
ENST00000486006.1	QC splicing correct
ENST00000449346.1	GENCODE experimental pipeline
ENST00000428191.1	GENCODE experimental pipeline
ENST00000442984.1	GENCODE experimental pipeline
ENST00000335508.11	MANE_select
ENST00000409915.8	alternative 3' UTR
ENST00000263960.6	FLJ13448
ENST00000388968.8	MANE_select
ENST00000677454.1	align_id:3657299|asmbl_147464
ENST00000677913.1	align_id:3657271|asmbl_147436
ENST00000678761.1	align_id:3657270|asmbl_147435
ENST00000461097.2	align_id:3657279|asmbl_147444
ENST00000440114.2	pacbio_capture_seq compmerge.8054.pooled.chr2
ENST00000439605.2	alternative 5' UTR
ENST00000418022.2	align_id:3657269|asmbl_147434
ENST00000418022.2	alternative 5' UTR
ENST00000428204.6	alternative 5' UTR
ENST00000678969.1	align_id:3657290|asmbl_147455
ENST00000476746.6	align_id:3657274|asmbl_147439
ENST00000678170.1	align_id:3657288|asmbl_147453
ENST00000676933.1	align_id:3657277|asmbl_147442
ENST00000678621.1	align_id:3657287|asmbl_147452
ENST00000678545.1	align_id:3657284|asmbl_147449
ENST00000677403.1	align_id:1335987|asmbl_55890
ENST00000679291.1	align_id:3657291|asmbl_147456
ENST00000452200.6	align_id:3657266|asmbl_147431
ENST00000452200.6	alternative 5' UTR
ENST00000345042.6	align_id:3657267|asmbl_147432
ENST00000426480.2	upstream ATG
ENST00000430176.6	alternative 5' UTR
ENST00000233893.10	MANE_select
ENST00000323303.9	MANE_select
ENST00000409360.1	alternative 5' UTR
ENST00000295049.9	MANE_select
ENST00000429081.1	alternative 5' UTR
ENST00000664764.1	Assembled from SLRseq reads (SRP049776)
ENST00000282276.8	MANE_select
ENST00000392296.9	MANE_select
ENST00000433157.1	alternative 5' UTR
ENST00000428675.6	MANE_select
ENST00000650958.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000448977.1	GENCODE experimental pipeline
ENST00000658157.1	Assembled from SLRseq reads (SRP049776)
ENST00000443261.2	GENCODE experimental pipeline
ENST00000659638.1	Assembled from SLRseq reads (SRP049776)
ENST00000417098.6	MANE_select
ENST00000417098.6	alternative 5' UTR
ENST00000260926.9	alternative 5' UTR
ENST00000457245.5	alternative 5' UTR
ENST00000440919.1	alternative 5' UTR
ENST00000666719.1	Assembled from SLRseq reads (SRP049776)
ENST00000668832.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000450728.1	GENCODE experimental pipeline
ENST00000446911.1	QC splicing correct
ENST00000669659.1	Assembled from SLRseq reads (SRP049776)
ENST00000657450.1	Assembled from SLRseq reads (SRP049776)
ENST00000663879.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656508.1	Assembled from SLRseq reads (SRP049776)
ENST00000664879.1	Assembled from RACEseq reads
ENST00000664879.1	Assembled from SLRseq reads (SRP049776)
ENST00000657231.1	Assembled from SLRseq reads (SRP049776)
ENST00000655676.1	Assembled from SLRseq reads (SRP049776)
ENST00000622774.2	NP_001337782.1
ENST00000622774.2	Swiss-Prot isoform E5RQL4.1
ENST00000653798.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000600956.6	Extended 5' end with assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000413557.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608419.1	nested 454 RNA-Seq supported
ENST00000319974.6	MANE_select
ENST00000354611.9	MANE_select
ENST00000392290.5	FLJ22555
ENST00000392290.5	NP_078796.1
ENST00000665393.1	Assembled from SLRseq reads (SRP049776)
ENST00000439084.5	alternative 5' UTR
ENST00000409718.5	alternative 5' UTR
ENST00000358677.9	alternative 5' UTR
ENST00000444012.5	alternative 5' UTR
ENST00000451764.6	alternative 5' UTR
ENST00000423749.5	alternative 5' UTR
ENST00000428692.5	alternative 5' UTR
ENST00000457757.5	alternative 5' UTR
ENST00000409140.8	MANE_select
ENST00000409140.8	alternative 5' UTR
ENST00000421573.5	alternative 5' UTR
ENST00000449647.5	alternative 5' UTR
ENST00000655656.1	Assembled from SLRseq reads (SRP049776)
ENST00000654840.1	Assembled from SLRseq reads (SRP049776)
ENST00000664045.1	Assembled from SLRseq reads (SRP049776)
ENST00000666133.1	Assembled from SLRseq reads (SRP049776)
ENST00000359878.8	MANE_select
ENST00000409157.5	alternative 5' UTR
ENST00000418045.5	alternative 5' UTR
ENST00000357799.9	MANE_select
ENST00000374700.7	MANE_select
ENST00000661396.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661396.1	Assembled from SLRseq reads (SRP049776)
ENST00000661396.1	GENCODE experimental pipeline
ENST00000452787.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452787.2	Assembled from SLRseq reads (SRP049776)
ENST00000655127.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663258.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653867.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000472376.2	QC splicing correct
ENST00000447972.3	GENCODE experimental pipeline
ENST00000450637.5	alternative 5' UTR
ENST00000452206.5	alternative 5' UTR
ENST00000410110.6	alternative 5' UTR
ENST00000409600.6	MANE_select
ENST00000321356.9	MANE_select
ENST00000392283.9	MANE_select
ENST00000426253.5	alternative 5' UTR
ENST00000454952.1	alternative 5' UTR
ENST00000651500.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000651500.1	alternative 5' UTR
ENST00000409020.6	MANE_select
ENST00000409129.2	alternative 5' UTR
ENST00000409129.2	dotter required to determine strucutre
ENST00000234296.7	MANE_select
ENST00000410039.5	QC splicing correct
ENST00000410039.5	alternative 5' UTR
ENST00000457595.1	alternative 5' UTR
ENST00000413848.1	GENCODE experimental pipeline
ENST00000418596.7	DKFZp313I1420
ENST00000452799.5	alternative 5' UTR
ENST00000453765.5	alternative 5' UTR
ENST00000450023.5	alternative 5' UTR
ENST00000237889.9	MANE_select
ENST00000433898.5	alternative 5' UTR
ENST00000454214.1	alternative 5' UTR
ENST00000448256.1	GENCODE experimental pipeline
ENST00000309955.8	MANE_select
ENST00000441224.5	alternative 5' UTR
ENST00000433445.1	alternative 5' UTR
ENST00000425030.1	alternative 5' UTR
ENST00000417748.1	alternative 5' UTR
ENST00000440180.5	alternative 5' UTR
ENST00000631217.2	non canonical TEC
ENST00000625360.2	non canonical TEC
ENST00000626451.2	non canonical TEC
ENST00000434645.1	CAGE supported TSS
ENST00000286186.11	MANE_select
ENST00000392263.6	Alternatively spliced 5' UTR, shares CDS with AC007256.1-001 (partial)
ENST00000392263.6	alternative 5' UTR
ENST00000440732.5	alternative 5' UTR
ENST00000323492.11	alternative 5' UTR
ENST00000673742.1	MANE_select
ENST00000673742.1	alternative 5' UTR
ENST00000429881.1	alternative 5' UTR
ENST00000392257.8	MANE_select
ENST00000439709.5	alternative 5' UTR
ENST00000418364.1	alternative 5' UTR
ENST00000332624.8	MANE_select
ENST00000440597.1	alternative 5' UTR
ENST00000194530.8	MANE_select
ENST00000439140.6	MANE_select
ENST00000409883.7	MANE_select
ENST00000669966.1	Assembled from SLRseq reads (SRP049776)
ENST00000409474.8	MANE_select
ENST00000264276.11	MANE_select
ENST00000264276.11	rare donor site between exon 11 and exon 12
ENST00000679916.1	rare donor site between exon 2 and exon 3
ENST00000680149.1	NAGNAG splice site
ENST00000681619.1	NAGNAG splice site
ENST00000679409.1	CAGE supported TSS
ENST00000680630.1	NMD likely if extended
ENST00000680737.1	NMD likely if extended
ENST00000681758.1	NMD likely if extended
ENST00000681303.1	rare donor site between exon 11 and exon 12
ENST00000681152.1	alternative 5' UTR
ENST00000679550.1	CAGE supported TSS
ENST00000679550.1	alternative 5' UTR
ENST00000409632.7	alternative 5' UTR
ENST00000496244.5	non canonical polymorphism
ENST00000410052.1	alternative 5' UTR
ENST00000410091.7	alternative 5' UTR
ENST00000652192.3	MANE_select
ENST00000286201.3	MANE_select
ENST00000498697.3	MANE_select
ENST00000409515.3	NMD likely if extended
ENST00000409819.2	Assembled from RACEseq reads
ENST00000409819.2	GENCODE experimental pipeline
ENST00000670761.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652912.1	Assembled from SLRseq reads (SRP049776)
ENST00000447111.1	GENCODE experimental pipeline
ENST00000392246.7	MANE_select
ENST00000409498.6	non canonical TEC
ENST00000409205.5	alternative 5' UTR
ENST00000264279.10	MANE_select
ENST00000652719.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000374580.10	MANE_select
ENST00000392238.3	MANE_select
ENST00000358299.7	MANE_select
ENST00000358299.7	alternative 5' UTR
ENST00000392237.6	Isoform1
ENST00000450143.5	alternative 5' UTR
ENST00000435143.5	alternative 5' UTR
ENST00000419460.5	alternative 5' UTR
ENST00000412210.5	alternative 5' UTR
ENST00000457524.5	alternative 5' UTR
ENST00000432273.5	alternative 5' UTR
ENST00000416760.5	alternative 5' UTR
ENST00000454326.5	alternative 5' UTR
ENST00000484561.5	Isoform 2
ENST00000411681.5	alternative 5' UTR
ENST00000421334.1	alternative 5' UTR
ENST00000261015.5	MANE_select
ENST00000431787.5	alternative 5' UTR
ENST00000438828.4	MANE_select
ENST00000438828.4	alternative 5' UTR
ENST00000430899.5	alternative 5' UTR
ENST00000441569.5	alternative 5' UTR
ENST00000432024.5	alternative 5' UTR
ENST00000443740.5	alternative 5' UTR
ENST00000449802.5	Merged with ALS2CR16
ENST00000356079.9	MANE_select
ENST00000261018.12	CAGE supported TSS
ENST00000261018.12	MANE_select
ENST00000464761.1	not organism-supported
ENST00000319170.10	Isoform1
ENST00000319170.10	MANE_select
ENST00000308091.8	Isoform 3
ENST00000423104.5	QC splicing correct
ENST00000439222.5	QC splicing correct
ENST00000428637.5	alternative 5' UTR
ENST00000324106.9	MANE_select
ENST00000648405.2	CAGE supported TSS
ENST00000648405.2	LR annotation
ENST00000648405.2	MANE_select
ENST00000316386.11	MANE_select
ENST00000411436.1	GENCODE experimental pipeline
ENST00000653067.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000419860.1	GENCODE experimental pipeline
ENST00000444017.1	GENCODE experimental pipeline
ENST00000656172.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000406610.7	MANE_select
ENST00000488622.1	not organism-supported
ENST00000671212.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000450507.5	alternative 5' UTR
ENST00000357785.10	MANE_select
ENST00000357785.10	NP_003863.2
ENST00000417189.5	NP_957716.1
ENST00000357118.8	NP_957719.1
ENST00000272849.7	NP_061004.3
ENST00000412873.2	NP_958436.1
ENST00000422116.1	GENCODE experimental pipeline
ENST00000403263.6	MANE_select
ENST00000414320.1	alternative 5' UTR
ENST00000420509.1	GENCODE experimental pipeline
ENST00000233190.11	MANE_select
ENST00000449699.5	alternative 5' UTR
ENST00000454195.1	alternative 5' UTR
ENST00000453039.1	GENCODE experimental pipeline
ENST00000445505.5	NP_001032752.1
ENST00000445505.5	alternative 5' UTR
ENST00000392222.7	MANE_select
ENST00000392222.7	NP_001950.1
ENST00000392222.7	alternative 5' UTR
ENST00000435123.1	not organism-supported
ENST00000455150.1	not organism-supported
ENST00000437420.5	alternative 5' UTR
ENST00000451790.5	alternative 5' UTR
ENST00000447845.1	alternative 5' UTR
ENST00000439932.5	alternative 5' UTR
ENST00000411719.1	alternative 5' UTR
ENST00000458440.1	alternative 5' UTR
ENST00000648653.1	CAGE supported TSS
ENST00000648653.1	LR annotation
ENST00000374423.9	MANE_select
ENST00000649650.1	CAGE supported TSS
ENST00000649650.1	LR annotation
ENST00000649650.1	alternative 5' UTR
ENST00000649289.1	alternative 5' UTR
ENST00000649525.1	alternative 5' UTR
ENST00000264377.8	MANE_select
ENST00000374415.7	QC splicing correct
ENST00000415275.1	GENCODE experimental pipeline
ENST00000415029.1	GENCODE experimental pipeline
ENST00000441223.4	MANE_select
ENST00000453816.1	QC splicing correct
ENST00000452335.2	MANE_select
ENST00000374412.8	MANE_select
ENST00000418289.1	alternative 5' UTR
ENST00000403094.3	alternative 5' UTR
ENST00000402774.8	MANE_select
ENST00000402774.8	alternative 5' UTR
ENST00000658889.1	Assembled from SLRseq reads (SRP049776)
ENST00000658291.1	Assembled from SLRseq reads (SRP049776)
ENST00000661657.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000659096.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000438070.2	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000272852.4	MANE_select
ENST00000309446.11	MANE_select
ENST00000426163.5	alternative 5' UTR
ENST00000457962.5	alternative 5' UTR
ENST00000428777.1	GENCODE experimental pipeline
ENST00000666421.1	Assembled from SLRseq reads (SRP049776)
ENST00000440326.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656422.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656422.1	GENCODE experimental pipeline
ENST00000661935.1	Assembled from SLRseq reads (SRP049776)
ENST00000435643.1	GENCODE experimental pipeline
ENST00000660274.1	Assembled from RACEseq reads
ENST00000454444.1	GENCODE experimental pipeline
ENST00000438824.1	GENCODE experimental pipeline
ENST00000430624.5	alternative 5' UTR
ENST00000445803.5	alternative 5' UTR
ENST00000421139.5	QC splicing correct
ENST00000353267.8	MANE_select
ENST00000452474.5	alternative 5' UTR
ENST00000414681.1	alternative 5' UTR
ENST00000458426.5	alternative 5' UTR
ENST00000448823.2	QC splicing correct
ENST00000406927.6	alternative 5' UTR
ENST00000426075.5	alternative 5' UTR
ENST00000442521.1	alternative 5' UTR
ENST00000429730.1	GENCODE experimental pipeline
ENST00000295414.8	MANE_select
ENST00000650811.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000295417.4	MANE_select
ENST00000427836.8	Em:BC156835.1
ENST00000427836.8	MANE_select
ENST00000427836.8	NP_001073944.1
ENST00000343987.2	GENCODE experimental pipeline
ENST00000421964.1	GENCODE experimental pipeline
ENST00000264376.5	MANE_select
ENST00000282141.4	MANE_select
ENST00000260988.5	MANE_select
ENST00000304502.5	MANE_select
ENST00000341287.9	MANE_select
ENST00000451346.5	QC splicing correct
ENST00000428015.5	QC splicing correct
ENST00000423952.2	QC splicing correct
ENST00000449053.1	alternative 5' UTR
ENST00000345146.7	MANE_select
ENST00000446179.5	alternative 5' UTR
ENST00000415913.5	alternative 5' UTR
ENST00000415282.5	alternative 5' UTR
ENST00000417583.5	alternative 5' UTR
ENST00000451391.5	alternative 5' UTR
ENST00000440574.1	GENCODE experimental pipeline
ENST00000264380.9	MANE_select
ENST00000666011.1	Assembled from SLRseq reads (SRP049776)
ENST00000650878.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000199940.10	Isoform 5
ENST00000392193.5	Alternatively spliced 5' UTR, shares CDS with AC006385.2-001 (partial)
ENST00000392193.5	alternative 5' UTR
ENST00000360351.8	Isoform 1
ENST00000392194.5	Isoform 2
ENST00000475600.5	QC splicing correct
ENST00000673951.1	CAGE supported TSS
ENST00000673920.1	MANE_select
ENST00000272845.10	QC splicing correct
ENST00000436630.6	alternative 5' UTR
ENST00000408981.6	alternative 5' UTR
ENST00000429921.5	alternative 5' UTR
ENST00000453724.5	alternative 5' UTR
ENST00000359429.11	MANE_select
ENST00000438265.5	alternative 5' UTR
ENST00000441588.5	alternative 5' UTR
ENST00000438204.6	alternative 5' UTR
ENST00000281772.14	MANE_select
ENST00000457374.5	alternative 5' UTR
ENST00000608095.1	CAGE supported TSS
ENST00000668130.1	Assembled from SLRseq reads (SRP049776)
ENST00000452057.1	GENCODE experimental pipeline
ENST00000652584.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000233710.4	MANE_select
ENST00000352451.4	MANE_select
ENST00000420418.5	GENCODE experimental pipeline
ENST00000443314.5	alternative 5' UTR
ENST00000441020.7	alternative 5' UTR
ENST00000450366.7	MANE_select
ENST00000233714.8	alternative 5' UTR
ENST00000431941.6	alternative 5' UTR
ENST00000448951.5	alternative 5' UTR
ENST00000673510.1	alternative 5' UTR
ENST00000673630.1	alternative 5' UTR
ENST00000673711.1	alternative 5' UTR
ENST00000673711.1	upstream ATG
ENST00000233072.10	MANE_select
ENST00000342788.9	MANE_select
ENST00000656101.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662471.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653871.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659055.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000453965.2	GENCODE experimental pipeline
ENST00000437261.1	GENCODE experimental pipeline
ENST00000664834.1	Assembled from SLRseq reads (SRP049776)
ENST00000433134.5	alternative 5' UTR
ENST00000452786.2	alternative 5' UTR
ENST00000360083.3	GENCODE experimental pipeline
ENST00000331683.10	MANE_select
ENST00000661682.1	Assembled from SLRseq reads (SRP049776)
ENST00000437883.1	GENCODE experimental pipeline
ENST00000312504.10	MANE_select
ENST00000312504.10	NP_001073969.1
ENST00000416430.1	GENCODE experimental pipeline
ENST00000260947.9	CAGE supported TSS
ENST00000260947.9	LR annotation
ENST00000260947.9	MANE_select
ENST00000471787.1	NMD likely if extended
ENST00000655899.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000655899.1	Assembled from SLRseq reads (SRP049776)
ENST00000670391.1	Assembled from SLRseq reads (SRP049776)
ENST00000664818.1	Assembled from SLRseq reads (SRP049776)
ENST00000607412.1	GENCODE experimental pipeline
ENST00000272895.12	MANE_select
ENST00000657931.1	Assembled from SLRseq reads (SRP049776)
ENST00000448086.1	GENCODE experimental pipeline
ENST00000236959.14	MANE_select
ENST00000354785.11	MANE_select
ENST00000412951.1	GENCODE experimental pipeline
ENST00000447835.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000447835.2	QC splicing correct
ENST00000663952.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668288.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665911.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654236.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654128.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657487.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000414756.1	GENCODE experimental pipeline
ENST00000431727.2	GENCODE experimental pipeline
ENST00000655359.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662840.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445174.5	GENCODE experimental pipeline
ENST00000662624.1	Assembled from SLRseq reads (SRP049776)
ENST00000659768.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659768.1	Assembled from SLRseq reads (SRP049776)
ENST00000655131.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654368.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000661231.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664275.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655043.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417922.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413563.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000415479.1	GENCODE experimental pipeline
ENST00000443971.1	GENCODE experimental pipeline
ENST00000413311.1	Em:AA830742.1
ENST00000263268.11	MANE_select
ENST00000439791.5	alternative 5' UTR
ENST00000424992.5	alternative 5' UTR
ENST00000265322.8	MANE_select
ENST00000487318.6	QC splicing correct
ENST00000433112.5	alternative 5' UTR
ENST00000455479.5	alternative 5' UTR
ENST00000406027.2	alternative 5' UTR
ENST00000437356.7	MANE_select
ENST00000437356.7	alternative 5' UTR
ENST00000392132.7	MANE_select
ENST00000392132.7	genebuild_only_MANE
ENST00000273067.5	MANE_select
ENST00000417481.1	GENCODE experimental pipeline
ENST00000452736.1	GENCODE experimental pipeline
ENST00000457694.1	GENCODE experimental pipeline
ENST00000430374.5	alternative 5' UTR
ENST00000357276.9	MANE_select
ENST00000444508.5	alternative 5' UTR
ENST00000425815.5	alternative 5' UTR
ENST00000358207.9	alternative 5' UTR
ENST00000434435.1	alternative 5' UTR
ENST00000453157.1	GENCODE experimental pipeline
ENST00000670726.1	Assembled from SLRseq reads (SRP049776)
ENST00000414135.1	GENCODE experimental pipeline
ENST00000491306.6	MANE_select
ENST00000449783.1	GENCODE experimental pipeline
ENST00000656870.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652757.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000441803.1	GENCODE experimental pipeline
ENST00000233809.9	MANE_select
ENST00000233813.5	MANE_select
ENST00000447289.1	QC splicing correct
ENST00000434973.1	GENCODE experimental pipeline
ENST00000656038.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440900.1	GENCODE experimental pipeline
ENST00000236979.2	MANE_select
ENST00000456163.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456163.2	GENCODE experimental pipeline
ENST00000451711.1	GENCODE experimental pipeline
ENST00000418591.1	GENCODE experimental pipeline
ENST00000664474.1	Assembled from SLRseq reads (SRP049776)
ENST00000657920.1	Assembled from SLRseq reads (SRP049776)
ENST00000655995.1	Assembled from SLRseq reads (SRP049776)
ENST00000666326.1	Assembled from SLRseq reads (SRP049776)
ENST00000657418.1	Assembled from SLRseq reads (SRP049776)
ENST00000666026.1	Assembled from SLRseq reads (SRP049776)
ENST00000452813.1	GENCODE experimental pipeline
ENST00000654616.2	Assembled from RACEseq reads
ENST00000663156.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663562.1	Assembled from SLRseq reads (SRP049776)
ENST00000676082.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000671322.1	Assembled from SLRseq reads (SRP049776)
ENST00000646520.1	CAGE supported TSS
ENST00000651849.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000446688.5	CAGE supported TSS
ENST00000413280.5	alternative 5' UTR
ENST00000439083.5	alternative 5' UTR
ENST00000449814.1	alternative 5' UTR
ENST00000465306.1	QC splicing correct
ENST00000450996.1	GENCODE experimental pipeline
ENST00000654642.1	Assembled from SLRseq reads (SRP049776)
ENST00000374155.7	non canonical TEC
ENST00000453237.5	alternative 5' UTR
ENST00000415392.5	alternative 5' UTR
ENST00000449014.5	alternative 5' UTR
ENST00000454148.1	alternative 5' UTR
ENST00000318507.7	MANE_select
ENST00000428565.1	alternative 5' UTR
ENST00000418878.1	alternative 5' UTR
ENST00000295683.3	MANE_select
ENST00000420104.5	alternative 5' UTR
ENST00000315717.10	MANE_select
ENST00000315717.10	alternative 5' UTR
ENST00000519574.2	MANE_select
ENST00000248450.9	MANE_select
ENST00000273077.9	MANE_select
ENST00000258412.8	MANE_select
ENST00000444881.5	alternative 5' UTR
ENST00000439306.5	QC splicing correct
ENST00000429501.5	alternative 5' UTR
ENST00000425694.5	alternative 5' UTR
ENST00000418569.5	alternative 5' UTR
ENST00000440422.5	alternative 5' UTR
ENST00000444183.5	alternative 5' UTR
ENST00000444000.5	alternative 5' UTR
ENST00000453281.5	alternative 5' UTR
ENST00000451181.5	alternative 5' UTR
ENST00000434015.2	alternative 5' UTR
ENST00000413976.1	alternative 5' UTR
ENST00000420341.1	alternative 5' UTR
ENST00000411433.1	GENCODE experimental pipeline
ENST00000289388.4	MANE_select
ENST00000441749.1	GENCODE experimental pipeline
ENST00000233202.11	MANE_select
ENST00000273062.7	MANE_select
ENST00000464255.1	not organism-supported
ENST00000608367.1	CAGE supported TSS
ENST00000248444.10	MANE_select
ENST00000258399.8	MANE_select
ENST00000454775.5	alternative 5' UTR
ENST00000418019.5	alternative 5' UTR
ENST00000486242.1	QC splicing correct
ENST00000273064.11	MANE_select
ENST00000418808.1	alternative 3' UTR
ENST00000483685.5	non canonical conserved
ENST00000444453.5	non canonical conserved
ENST00000446503.5	non canonical conserved
ENST00000469493.5	non canonical conserved
ENST00000450993.7	MANE_select
ENST00000450993.7	non canonical conserved
ENST00000465713.5	non canonical conserved
ENST00000417849.5	alternative 3' UTR
ENST00000417849.5	non canonical conserved
ENST00000415854.5	alternative 5' UTR
ENST00000432688.5	non canonical conserved
ENST00000457773.1	alternative 3' UTR
ENST00000411696.7	CAGE supported TSS
ENST00000411696.7	MANE_select
ENST00000433921.5	alternative 5' UTR
ENST00000440934.2	alternative 5' UTR
ENST00000450560.1	alternative 5' UTR
ENST00000428880.5	alternative 5' UTR
ENST00000430322.5	alternative 5' UTR
ENST00000359273.8	CAGE supported TSS
ENST00000359273.8	MANE_select
ENST00000359273.8	alternative 5' UTR
ENST00000392111.7	CAGE supported TSS
ENST00000392111.7	LR annotation
ENST00000392111.7	alternative 5' UTR
ENST00000392110.6	alternative 5' UTR
ENST00000423377.5	alternative 5' UTR
ENST00000412366.5	alternative 5' UTR
ENST00000439945.5	alternative 5' UTR
ENST00000431802.5	alternative 5' UTR
ENST00000643945.1	alternative 5' UTR
ENST00000465706.1	not organism-supported
ENST00000295704.7	MANE_select
ENST00000295709.8	MANE_select
ENST00000440309.5	alternative 5' UTR
ENST00000424080.1	alternative 5' UTR
ENST00000392102.6	MANE_select
ENST00000457313.5	confirm experimentally
ENST00000415717.5	alternative 5' UTR
ENST00000437755.1	alternative 5' UTR
ENST00000424644.1	alternative 5' UTR
ENST00000434241.1	not organism-supported
ENST00000448224.1	not organism-supported
ENST00000258415.9	MANE_select
ENST00000652549.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000233948.4	MANE_select
ENST00000486233.1	not organism-supported
ENST00000258411.8	MANE_select
ENST00000419511.1	GENCODE experimental pipeline
ENST00000302625.6	MANE_select
ENST00000654913.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000627043.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000295727.2	MANE_select
ENST00000295728.7	MANE_select
ENST00000295728.7	alternative 5' UTR
ENST00000453769.1	alternative 5' UTR
ENST00000441450.1	GENCODE experimental pipeline
ENST00000441450.1	LOC100129175
ENST00000341552.10	MANE_select
ENST00000295729.6	NP_689602
ENST00000458526.1	alternative 5' UTR
ENST00000295731.7	MANE_select
ENST00000666065.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000356853.10	MANE_select
ENST00000457600.2	alternative 5' UTR
ENST00000409878.8	MANE_select
ENST00000421779.2	NMD likely if extended
ENST00000360507.10	MANE_select
ENST00000409789.5	alternative 5' UTR
ENST00000453038.5	alternative 5' UTR
ENST00000443757.5	alternative 5' UTR
ENST00000430297.7	MANE_select
ENST00000430747.5	alternative 5' UTR
ENST00000452022.1	alternative 5' UTR
ENST00000289528.10	MANE_select
ENST00000409206.5	alternative 5' UTR
ENST00000422255.5	alternative 5' UTR
ENST00000409336.5	alternative 5' UTR
ENST00000409319.5	alternative 5' UTR
ENST00000657417.1	Assembled from SLRseq reads (SRP049776)
ENST00000265316.9	LR annotation
ENST00000265316.9	MANE_select
ENST00000361242.9	MANE_select
ENST00000361242.9	alternative 5' UTR
ENST00000409618.5	alternative 5' UTR
ENST00000429920.1	not organism-supported
ENST00000436856.5	alternative 5' UTR
ENST00000457841.5	alternative 5' UTR
ENST00000428226.5	alternative 5' UTR
ENST00000432520.5	alternative 5' UTR
ENST00000439812.5	alternative 5' UTR
ENST00000455079.5	NMD likely if extended
ENST00000455079.5	alternative 5' UTR
ENST00000443140.5	alternative 5' UTR
ENST00000434939.1	alternative 5' UTR
ENST00000323348.10	MANE_select
ENST00000410034.7	alternative 5' UTR
ENST00000447157.5	alternative 5' UTR
ENST00000436226.1	alternative 5' UTR
ENST00000295759.12	MANE_select
ENST00000392089.6	alternative 5' UTR
ENST00000428427.1	alternative 5' UTR
ENST00000424620.1	alternative 5' UTR
ENST00000396738.7	MANE_select
ENST00000396738.7	alternative 5' UTR
ENST00000486813.1	not organism-supported
ENST00000248437.9	MANE_select
ENST00000427737.5	alternative 5' UTR
ENST00000490341.3	MANE_select
ENST00000425450.5	alternative 5' UTR
ENST00000336576.10	MANE_select
ENST00000442681.5	alternative 5' UTR
ENST00000439026.1	alternative 5' UTR
ENST00000295718.7	MANE_select
ENST00000423636.6	NP_001186693.1
ENST00000412847.5	alternative 5' UTR
ENST00000446182.5	alternative 5' UTR
ENST00000442029.5	alternative 5' UTR
ENST00000451506.5	alternative 5' UTR
ENST00000417355.1	GENCODE experimental pipeline
ENST00000333527.6	MANE_select
ENST00000273075.9	MANE_select
ENST00000373960.4	MANE_select
ENST00000431827.1	QC splicing correct
ENST00000431827.1	not best-in-genome evidence
ENST00000312358.12	MANE_select
ENST00000312358.12	QC splicing correct
ENST00000431523.5	novel protein
ENST00000396698.5	QC splicing correct
ENST00000409595.2	not organism-supported
ENST00000485069.1	novel transcript
ENST00000429882.1	missed on first pass annotation
ENST00000475104.1	3'RACE515
ENST00000475104.1	VMRT287
ENST00000475104.1	encode_confirmed
ENST00000480506.5	novel transcript
ENST00000313597.10	MANE_select
ENST00000443704.5	novel transcript
ENST00000480034.1	novel transcript
ENST00000496536.1	novel transcript
ENST00000358078.5	CAGE supported TSS
ENST00000358078.5	MANE_select
ENST00000243776.11	MANE_select
ENST00000373883.4	MANE_select
ENST00000373883.4	MGC99813
ENST00000451952.1	GENCODE experimental pipeline
ENST00000404537.6	MANE_select
ENST00000462534.5	novel transcript
ENST00000465149.1	KIAA0657
ENST00000465149.1	novel transcript
ENST00000472388.1	novel transcript
ENST00000462385.1	novel transcript
ENST00000465589.1	novel transcript
ENST00000243786.3	MANE_select
ENST00000456909.6	MANE_select
ENST00000455896.1	confirm experimentally
ENST00000373760.6	QC splicing correct
ENST00000358055.8	MANE_select
ENST00000413743.5	QC splicing correct
ENST00000416910.1	QC splicing correct
ENST00000597288.1	not organism-supported
ENST00000438659.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650939.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000432993.1	GENCODE experimental pipeline
ENST00000438633.1	GENCODE experimental pipeline
ENST00000665624.1	Assembled from SLRseq reads (SRP049776)
ENST00000670511.1	Assembled from SLRseq reads (SRP049776)
ENST00000657044.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658049.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000662749.1	Assembled from SLRseq reads (SRP049776)
ENST00000651076.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000650956.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000281821.7	MANE_select
ENST00000281821.7	genebuild_only_MANE
ENST00000541600.5	alternative 5' UTR
ENST00000434266.1	alternative 5' UTR
ENST00000609776.1	CAGE supported TSS
ENST00000658881.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664786.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000453706.2	GENCODE experimental pipeline
ENST00000392070.7	MANE_select
ENST00000392070.7	NP_852123.1
ENST00000336840.11	NP_852125.1
ENST00000344493.9	NP_852126
ENST00000409551.7	NAGNAG splice site
ENST00000350526.9	NP_852122.1
ENST00000644490.1	TB0000032-DNA_A01-LRAAD-01:Read_74224-Barcode%3DBC110:length%3D2765
ENST00000409828.7	NP_000429.2
ENST00000258387.6	NP_039230.1
ENST00000440903.1	alternative 5' UTR
ENST00000429475.5	GENCODE experimental pipeline
ENST00000321276.8	MANE_select
ENST00000281828.8	MANE_select
ENST00000568928.3	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000446656.4	MANE_select
ENST00000446656.4	QC splicing correct
ENST00000392066.7	alternative 5' UTR
ENST00000680251.1	alternative 5' UTR
ENST00000357430.8	MANE_select
ENST00000413316.1	alternative 5' UTR
ENST00000446709.1	GENCODE experimental pipeline
ENST00000422118.1	GENCODE experimental pipeline
ENST00000440341.1	GENCODE experimental pipeline
ENST00000305409.3	MANE_select
ENST00000421386.1	alternative 5' UTR
ENST00000433889.1	alternative 5' UTR
ENST00000396654.7	MANE_select
ENST00000650969.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000233055.9	MANE_select
ENST00000258383.4	MANE_select
ENST00000425192.1	GENCODE experimental pipeline
ENST00000409304.6	MANE_select
ENST00000409840.7	alternative 5' UTR
ENST00000432738.5	alternative 5' UTR
ENST00000454956.1	alternative 5' UTR
ENST00000423446.1	alternative 5' UTR
ENST00000409685.4	MANE_select
ENST00000243806.2	alternative 3' UTR
ENST00000264414.9	MANE_select
ENST00000409777.5	alternative 5' UTR
ENST00000451538.1	not organism-supported
ENST00000258390.12	MANE_select
ENST00000645028.1	CAGE supported TSS
ENST00000423838.1	GENCODE experimental pipeline
ENST00000305123.6	MANE_select
ENST00000668519.1	Assembled from SLRseq reads (SRP049776)
ENST00000607970.2	Assembled from SLRseq reads (SRP049776)
ENST00000424132.1	alternative 5' UTR
ENST00000437454.5	alternative 5' UTR
ENST00000443477.5	alternative 5' UTR
ENST00000423616.1	alternative 5' UTR
ENST00000392062.7	MANE_select
ENST00000392062.7	genebuild_only_MANE
ENST00000448992.5	alternative 5' UTR
ENST00000436481.1	alternative 5' UTR
ENST00000396625.5	MANE_select
ENST00000396625.5	QC splicing correct
ENST00000643379.1	alternative 5' UTR
ENST00000396578.8	LR annotation
ENST00000396578.8	MANE_select
ENST00000439598.6	non canonical polymorphism
ENST00000670070.1	Assembled from SLRseq reads (SRP049776)
ENST00000665988.1	Assembled from SLRseq reads (SRP049776)
ENST00000437673.6	Assembled from SLRseq reads (SRP049776)
ENST00000656771.1	Assembled from SLRseq reads (SRP049776)
ENST00000656707.1	Assembled from SLRseq reads (SRP049776)
ENST00000433324.2	Assembled from SLRseq reads (SRP049776)
ENST00000668704.1	Assembled from SLRseq reads (SRP049776)
ENST00000606119.2	Assembled from SLRseq reads (SRP049776)
ENST00000657158.1	Assembled from SLRseq reads (SRP049776)
ENST00000665165.1	Assembled from RACEseq reads
ENST00000662009.1	Assembled from SLRseq reads (SRP049776)
ENST00000666788.1	Assembled from SLRseq reads (SRP049776)
ENST00000671563.1	Assembled from SLRseq reads (SRP049776)
ENST00000669075.1	Assembled from SLRseq reads (SRP049776)
ENST00000657873.1	Assembled from SLRseq reads (SRP049776)
ENST00000660803.1	Assembled from SLRseq reads (SRP049776)
ENST00000658093.1	Assembled from SLRseq reads (SRP049776)
ENST00000658632.1	Assembled from SLRseq reads (SRP049776)
ENST00000656540.1	Assembled from SLRseq reads (SRP049776)
ENST00000423098.5	alternative 5' UTR
ENST00000354503.10	alternative 5' UTR
ENST00000304593.14	MANE_select
ENST00000452930.5	alternative 5' UTR
ENST00000525195.5	alternative 5' UTR
ENST00000349901.11	alternative 5' UTR
ENST00000436237.5	alternative 5' UTR
ENST00000443428.6	alternative 5' UTR
ENST00000418961.5	alternative 5' UTR
ENST00000304568.4	MANE_select
ENST00000449706.1	alternative 5' UTR
ENST00000641359.1	not best-in-genome evidence
ENST00000310078.13	MANE_select
ENST00000641394.1	not best-in-genome evidence
ENST00000641246.2	not best-in-genome evidence
ENST00000642029.1	not best-in-genome evidence
ENST00000413096.1	GENCODE experimental pipeline
ENST00000641801.1	upstream ATG
ENST00000641976.1	not best-in-genome evidence
ENST00000644224.2	MANE_select
ENST00000258403.8	alternative 5' UTR
ENST00000425817.6	alternative 5' UTR
ENST00000419059.1	alternative 5' UTR
ENST00000409456.2	alternative 5' UTR
ENST00000641918.1	not best-in-genome evidence
ENST00000641700.1	not best-in-genome evidence
ENST00000358813.5	MANE_select
ENST00000309931.3	MANE_select
ENST00000392056.8	MANE_select
ENST00000665688.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000665053.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667233.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656071.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000442062.1	GENCODE experimental pipeline
ENST00000392055.8	MANE_select
ENST00000341772.5	MANE_select
ENST00000658948.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000675453.1	CAGE supported TSS
ENST00000675903.1	CAGE supported TSS
ENST00000675903.1	MANE_select
ENST00000675903.1	NAGNAG splice site
ENST00000435716.5	alternative 5' UTR
ENST00000428959.5	alternative 5' UTR
ENST00000430954.5	alternative 5' UTR
ENST00000343290.5	alternative 5' UTR
ENST00000283946.8	MANE_select
ENST00000409992.1	not organism-supported
ENST00000432957.1	GENCODE experimental pipeline
ENST00000295190.9	MANE_select
ENST00000425822.5	alternative 5' UTR
ENST00000436869.1	alternative 5' UTR
ENST00000445199.4	Assembled from SLRseq reads (SRP049776)
ENST00000609120.1	454 RNA-Seq supported
ENST00000595586.2	454 RNA-Seq supported
ENST00000258381.11	MANE_select
ENST00000409815.6	alternative 5' UTR
ENST00000392045.8	MANE_select
ENST00000392045.8	NP_009168
ENST00000415673.7	MANE_select
ENST00000340126.9	MANE_select
ENST00000340126.9	NP_001073860
ENST00000414539.1	GENCODE experimental pipeline
ENST00000660361.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000415174.1	GENCODE experimental pipeline
ENST00000258418.10	MANE_select
ENST00000410084.7	alternative 5' UTR
ENST00000409788.7	alternative 5' UTR
ENST00000457215.5	alternative 5' UTR
ENST00000541852.5	alternative 5' UTR
ENST00000326427.11	MANE_select
ENST00000543957.5	QC splicing correct
ENST00000409704.6	alternative 5' UTR
ENST00000418408.2	alternative 5' UTR
ENST00000658438.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670310.1	Assembled from SLRseq reads (SRP049776)
ENST00000663229.1	Assembled from SLRseq reads (SRP049776)
ENST00000415628.1	GENCODE experimental pipeline
ENST00000650999.1	MANE_select
ENST00000650999.1	genebuild_only_MANE
ENST00000438398.1	alternative 5' UTR
ENST00000662955.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418330.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000457803.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660623.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426904.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657511.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000424440.5	NMD exception
ENST00000424440.5	alternative 3' UTR
ENST00000452881.5	NMD exception
ENST00000452881.5	NP_620712
ENST00000433428.6	NMD exception
ENST00000433428.6	alternative 3' UTR
ENST00000455816.1	NMD exception
ENST00000455816.1	alternative 3' UTR
ENST00000440792.5	NMD exception
ENST00000423134.1	NMD exception
ENST00000495639.1	NMD exception
ENST00000495639.1	alternative 3' UTR
ENST00000373640.5	MANE_select
ENST00000463834.1	GENCODE experimental pipeline
ENST00000677230.1	alternative 3' UTR
ENST00000308696.11	MANE_select
ENST00000258400.4	MANE_select
ENST00000611582.5	CAGE supported TSS
ENST00000611582.5	MANE_select
ENST00000440107.5	alternative 5' UTR
ENST00000415129.1	GENCODE experimental pipeline
ENST00000287590.6	MANE_select
ENST00000370380.2	GENCODE experimental pipeline
ENST00000322723.9	MANE_select
ENST00000453992.6	alternative 5' UTR
ENST00000436894.2	alternative 5' UTR
ENST00000454824.6	alternative 5' UTR
ENST00000668648.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000313064.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671602.1	Assembled from SLRseq reads (SRP049776)
ENST00000305141.5	MANE_select
ENST00000663367.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000313965.4	MANE_select
ENST00000409115.8	MANE_select
ENST00000287600.9	MANE_select
ENST00000410024.5	alternative 5' UTR
ENST00000350033.8	MANE_select
ENST00000409852.2	MANE_select
ENST00000409852.2	alternative 3' UTR
ENST00000441279.5	alternative 5' UTR
ENST00000325385.12	CAGE supported TSS
ENST00000325385.12	MANE_select
ENST00000470087.1	QC splicing correct
ENST00000413841.1	GENCODE experimental pipeline
ENST00000392027.3	MANE_select
ENST00000392027.3	upstream_ATG-15aa
ENST00000441266.5	GENCODE experimental pipeline
ENST00000439072.1	not organism-supported
ENST00000295453.8	MANE_select
ENST00000295463.4	MANE_select
ENST00000304546.6	MANE_select
ENST00000617714.2	CAGE supported TSS
ENST00000617714.2	MANE_select
ENST00000258385.8	MANE_select
ENST00000651502.1	LR annotation
ENST00000651502.1	MANE_select
ENST00000408957.7	MANE_select
ENST00000258416.8	MANE_select
ENST00000608132.1	nested 454 RNA-Seq supported
ENST00000264059.8	MANE_select
ENST00000427698.1	alternative 5' UTR
ENST00000410095.5	alternative 5' UTR
ENST00000427233.5	alternative 5' UTR
ENST00000428883.5	alternative 5' UTR
ENST00000421433.5	alternative 5' UTR
ENST00000425040.5	alternative 5' UTR
ENST00000373563.9	MANE_select
ENST00000373563.9	alternative 5' UTR
ENST00000429187.5	alternative 5' UTR
ENST00000440945.5	alternative 5' UTR
ENST00000490229.5	QC splicing correct
ENST00000233826.4	MANE_select
ENST00000410029.1	alternative 5' UTR
ENST00000444142.1	not organism-supported
ENST00000448993.1	QC splicing correct
ENST00000448993.1	alternative 5' UTR
ENST00000409533.5	alternative 5' UTR
ENST00000409230.5	upstream_ATG-24aa
ENST00000264051.8	MANE_select
ENST00000424488.5	CAGE supported TSS
ENST00000233840.3	MANE_select
ENST00000445964.6	MANE_select
ENST00000445964.6	NAGNAG splice site
ENST00000491070.1	QC splicing correct
ENST00000392017.9	MANE_select
ENST00000447536.5	alternative 5' UTR
ENST00000409110.6	MANE_select
ENST00000264057.7	MANE_select
ENST00000489613.1	not organism-supported
ENST00000427112.6	alternative 5' UTR
ENST00000354728.5	MANE_select
ENST00000485022.1	QC splicing correct
ENST00000305139.11	MANE_select
ENST00000373409.8	MANE_select
ENST00000305208.10	MANE_select
ENST00000389758.3	QC splicing correct
ENST00000480634.2	QC splicing correct
ENST00000433484.2	confirm experimentally
ENST00000433484.2	non canonical TEC
ENST00000411486.7	FLJ90328
ENST00000411486.7	MANE_select
ENST00000434039.1	GENCODE experimental pipeline
ENST00000324695.9	MANE_select
ENST00000456930.1	not organism-supported
ENST00000475044.5	QC splicing correct
ENST00000475044.5	alternative 5' UTR
ENST00000466594.1	QC splicing correct
ENST00000652241.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000168148.8	MANE_select
ENST00000668838.1	Assembled from SLRseq reads (SRP049776)
ENST00000418025.1	GENCODE experimental pipeline
ENST00000439798.1	GENCODE experimental pipeline
ENST00000339728.6	MANE_select
ENST00000669419.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427619.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650875.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000413842.1	GENCODE experimental pipeline
ENST00000392011.7	MANE_select
ENST00000416021.5	alternative 5' UTR
ENST00000409212.5	alternative 5' UTR
ENST00000344528.8	alternative 5' UTR
ENST00000444916.5	alternative 5' UTR
ENST00000446904.5	alternative 5' UTR
ENST00000454947.1	alternative 5' UTR
ENST00000444926.1	GENCODE experimental pipeline
ENST00000449362.1	GENCODE experimental pipeline
ENST00000304032.13	MANE_select
ENST00000635100.1	Yang I. Li et al. 2015
ENST00000440498.1	GENCODE experimental pipeline
ENST00000440101.1	GENCODE experimental pipeline
ENST00000306318.5	MANE_select
ENST00000430053.1	not organism-supported
ENST00000409907.8	MANE_select
ENST00000409100.1	not organism-supported
ENST00000447924.1	alternative 5' UTR
ENST00000272928.4	MANE_select
ENST00000650781.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000658516.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000662924.1	Assembled from SLRseq reads (SRP049776)
ENST00000666653.1	Assembled from SLRseq reads (SRP049776)
ENST00000669095.1	Assembled from SLRseq reads (SRP049776)
ENST00000667956.1	Assembled from SLRseq reads (SRP049776)
ENST00000660650.1	Assembled from SLRseq reads (SRP049776)
ENST00000655155.1	Assembled from SLRseq reads (SRP049776)
ENST00000667175.1	Assembled from SLRseq reads (SRP049776)
ENST00000657607.1	Assembled from SLRseq reads (SRP049776)
ENST00000665401.1	Assembled from SLRseq reads (SRP049776)
ENST00000418430.1	GENCODE experimental pipeline
ENST00000244820.2	LOC93463
ENST00000392008.6	NP_937832
ENST00000354371.7	MANE_select
ENST00000447464.1	alternative 3' UTR
ENST00000416509.1	QC splicing correct
ENST00000445534.2	GENCODE experimental pipeline
ENST00000295550.9	MANE_select
ENST00000295550.9	NP_004360
ENST00000409162.1	GENCODE experimental pipeline
ENST00000422695.5	alternative 5' UTR
ENST00000429898.5	alternative 5' UTR
ENST00000264605.8	MANE_select
ENST00000165524.1	MANE_select
ENST00000264601.8	MANE_select
ENST00000409822.1	not organism-supported
ENST00000452801.1	GENCODE experimental pipeline
ENST00000417947.1	GENCODE experimental pipeline
ENST00000308482.14	MANE_select
ENST00000489295.5	QC splicing correct
ENST00000658803.1	Assembled from SLRseq reads (SRP049776)
ENST00000480583.5	upstream_ATG-1aa
ENST00000316997.9	EnsCodingFull|3P|XLOC_038316|TCONS_00156355:12.032
ENST00000316997.9	MANE_select
ENST00000409864.6	NP_001073973
ENST00000404910.6	alternative 5' UTR
ENST00000409726.5	alternative 5' UTR
ENST00000254661.5	MANE_select
ENST00000272930.9	MANE_select
ENST00000434655.5	alternative 5' UTR
ENST00000434137.2	not organism-supported
ENST00000254663.12	MANE_select
ENST00000343063.8	MANE_select
ENST00000423032.1	alternative 5' UTR
ENST00000409223.2	MANE_select
ENST00000546354.6	MANE_select
ENST00000546354.6	QC splicing correct
ENST00000486834.1	QC splicing correct
ENST00000473274.5	FLJ37034
ENST00000473274.5	hypothetical protein LOC151176
ENST00000254654.8	MANE_select
ENST00000409942.4	alternative 5' UTR
ENST00000664102.1	Assembled from SLRseq reads (SRP049776)
ENST00000659231.1	Assembled from SLRseq reads (SRP049776)
ENST00000272937.10	MANE_select
ENST00000254657.8	MANE_select
ENST00000431832.1	alternative 5' UTR
ENST00000373327.5	MANE_select
ENST00000264607.9	MANE_select
ENST00000481566.1	not organism-supported
ENST00000446979.1	GENCODE experimental pipeline
ENST00000653335.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448543.1	GENCODE experimental pipeline
ENST00000652430.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000652430.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000653275.1	Assembled from SLRseq reads (SRP049776)
ENST00000441444.1	GENCODE experimental pipeline
ENST00000612363.2	MANE_select
ENST00000612363.2	genebuild_only_MANE
ENST00000455228.1	GENCODE experimental pipeline
ENST00000543185.6	MANE_select
ENST00000656551.1	Assembled from SLRseq reads (SRP049776)
ENST00000653060.1	Assembled from SLRseq reads (SRP049776)
ENST00000670479.1	Assembled from RACEseq reads
ENST00000659636.1	Assembled from SLRseq reads (SRP049776)
ENST00000668894.1	Assembled from SLRseq reads (SRP049776)
ENST00000652635.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000446029.1	GENCODE experimental pipeline
ENST00000650712.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000252711.7	MANE_select
ENST00000641019.1	ENA ID EGAS00001001486
ENST00000607357.2	CAGE supported TSS
ENST00000607357.2	MANE_select
ENST00000319460.2	CAGE supported TSS
ENST00000319460.2	MANE_select
ENST00000391989.6	upstream_ATG-25aa
ENST00000664975.1	Assembled from SLRseq reads (SRP049776)
ENST00000650968.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000457178.1	not organism-supported
ENST00000264039.7	MANE_select
ENST00000404327.3	GENCODE experimental pipeline
ENST00000418708.3	alternative 5' UTR
ENST00000411765.1	alternative 5' UTR
ENST00000654460.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000405954.2	MANE_select
ENST00000270357.10	CAGE supported TSS
ENST00000270357.10	MANE_select
ENST00000567819.1	confirm experimentally
ENST00000391984.7	MANE_select
ENST00000319838.10	upstream_ATG-21aa
ENST00000403859.1	alternative 5' UTR
ENST00000403859.1	upstream_ATG-21aa
ENST00000407714.1	alternative 5' UTR
ENST00000438013.3	upstream_ATG-85aa
ENST00000407834.4	MANE_select
ENST00000337801.9	MANE_select
ENST00000498729.9	MANE_select
ENST00000648364.1	NP_001307634.1
ENST00000648680.1	NP_001317218.1
ENST00000650053.1	alternative 5' UTR
ENST00000649306.1	NP_001317219.1
ENST00000648129.1	alternative 5' UTR
ENST00000404283.9	confirm experimentally
ENST00000675644.1	Snaptron_GTEX
ENST00000675932.1	intropolis_filtered
ENST00000676050.1	intropolis_filtered
ENST00000676368.1	NMD likely if extended
ENST00000676368.1	intropolis_filtered
ENST00000674530.1	NMD likely if extended
ENST00000674530.1	intropolis_filtered
ENST00000675126.1	Snaptron_GTEX
ENST00000675421.1	Snaptron_GTEX
ENST00000674577.1	NMD likely if extended
ENST00000674577.1	Snaptron_GTEX
ENST00000675465.1	Snaptron_GTEX
ENST00000674975.1	Snaptron_GTEX
ENST00000675450.1	Snaptron_GTEX
ENST00000428768.2	alternative 5' UTR
ENST00000674607.1	intropolis_filtered
ENST00000676135.1	Snaptron_GTEX
ENST00000676135.1	intropolis_filtered
ENST00000674958.1	Ensembl_RNAseq_introns
ENST00000674958.1	Snaptron_GTEX
ENST00000676130.1	Snaptron_GTEX
ENST00000675314.1	Snaptron_GTEX
ENST00000675314.1	intropolis_filtered
ENST00000647572.1	alternative 5' UTR
ENST00000674793.1	intropolis_filtered
ENST00000448728.1	alternative 5' UTR
ENST00000674664.1	Snaptron_GTEX
ENST00000674664.1	alternative 5' UTR
ENST00000674907.1	CAGE supported TSS
ENST00000674907.1	alternative 5' UTR
ENST00000675940.1	CAGE supported TSS
ENST00000675940.1	Snaptron_GTEX
ENST00000675940.1	alternative 5' UTR
ENST00000675940.1	intropolis_filtered
ENST00000675152.1	CAGE supported TSS
ENST00000675152.1	Snaptron_GTEX
ENST00000675152.1	alternative 5' UTR
ENST00000675152.1	intropolis_filtered
ENST00000307503.4	MANE_select
ENST00000388934.5	MANE_select
ENST00000414499.1	alternative 5' UTR
ENST00000457369.1	GENCODE experimental pipeline
ENST00000425110.1	GENCODE experimental pipeline
ENST00000310397.13	MANE_select
ENST00000310397.13	QC splicing correct
ENST00000401884.5	QC splicing correct
ENST00000493358.1	QC splicing correct
ENST00000493169.1	NAGNAG
ENST00000391980.7	MANE_select
ENST00000234040.9	MANE_select
ENST00000405260.5	alternative 5' UTR
ENST00000452907.1	alternative 5' UTR
ENST00000407025.5	alternative 5' UTR
ENST00000234038.11	MANE_select
ENST00000427172.5	alternative 5' UTR
ENST00000674324.1	upstream ATG
ENST00000402430.8	upstream ATG
ENST00000402530.8	upstream ATG
ENST00000310931.9	alternative 5' UTR
ENST00000391976.6	alternative 5' UTR
ENST00000422933.5	alternative 5' UTR
ENST00000452065.5	alternative 5' UTR
ENST00000444092.5	alternative 5' UTR
ENST00000441124.5	alternative 5' UTR
ENST00000426343.5	alternative 5' UTR
ENST00000426343.5	upstream_ATG-36aa
ENST00000413241.5	alternative 5' UTR
ENST00000413241.5	upstream_ATG-36aa
ENST00000423693.5	alternative 5' UTR
ENST00000425989.5	alternative 5' UTR
ENST00000420451.5	alternative 5' UTR
ENST00000422080.5	alternative 5' UTR
ENST00000458564.5	alternative 5' UTR
ENST00000427007.5	alternative 5' UTR
ENST00000449504.5	alternative 5' UTR
ENST00000417540.5	alternative 5' UTR
ENST00000428524.5	alternative 5' UTR
ENST00000445030.5	alternative 5' UTR
ENST00000436795.5	alternative 5' UTR
ENST00000391971.7	MANE_select
ENST00000391971.7	alternative 5' UTR
ENST00000402092.6	alternative 5' UTR
ENST00000441533.5	alternative 5' UTR
ENST00000437066.5	upstream_ATG-35aa
ENST00000429791.5	alternative 5' UTR
ENST00000420786.5	alternative 5' UTR
ENST00000449239.5	alternative 5' UTR
ENST00000449239.5	upstream_ATG-19aa
ENST00000451310.1	alternative 3' UTR
ENST00000667920.1	Assembled from SLRseq reads (SRP049776)
ENST00000264042.8	MANE_select
ENST00000418082.1	alternative 5' UTR
ENST00000445489.1	alternative 5' UTR
ENST00000412332.1	alternative 3' UTR
ENST00000657185.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000316586.9	MANE_select
ENST00000403346.7	alternative 5' UTR
ENST00000401869.5	alternative 5' UTR
ENST00000436402.5	alternative 5' UTR
ENST00000420551.1	QC splicing correct
ENST00000641230.1	CAGE supported TSS
ENST00000318407.5	MANE_select
ENST00000407315.6	MANE_select
ENST00000405546.7	upstream_ATG-88aa
ENST00000402096.5	upstream_ATG-74aa
ENST00000491867.5	QC splicing correct
ENST00000404914.8	MANE_select
ENST00000430617.6	alternative 5' UTR
ENST00000305784.7	MANE_select
ENST00000636051.1	CAGE supported TSS
ENST00000433036.1	GENCODE experimental pipeline
ENST00000313552.11	MANE_select
ENST00000435195.1	QC splicing correct
ENST00000321264.9	MANE_select
ENST00000463932.1	not organism-supported
ENST00000437164.1	not organism-supported
ENST00000454048.1	not organism-supported
ENST00000432449.1	QC splicing correct
ENST00000417267.1	GENCODE experimental pipeline
ENST00000192314.7	MANE_select
ENST00000437438.1	GENCODE experimental pipeline
ENST00000439270.1	QC splicing correct
ENST00000405370.5	alternative 5' UTR
ENST00000407683.6	MANE_select
ENST00000423583.5	alternative 5' UTR
ENST00000404257.5	upstream_ATG-12aa
ENST00000391969.6	alternative 5' UTR
ENST00000420288.1	alternative 5' UTR
ENST00000334409.10	MANE_select
ENST00000419912.1	not organism-supported
ENST00000343216.3	MANE_select
ENST00000404031.6	LOC285095
ENST00000404031.6	MANE_select
ENST00000426962.1	These could be considered as retained introns but there is some polyA seq date to suggest a polyA site and there are sequences that are very similar to a polyA signal in the appropriate place, therefore makes more sense as a LincRNA
ENST00000664151.1	Assembled from SLRseq reads (SRP049776)
ENST00000662783.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661866.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456398.5	LOC728323
ENST00000444990.5	LOC728323
ENST00000431796.5	LOC728323
ENST00000416103.2	LOC728323
ENST00000433444.1	LOC728323
ENST00000663345.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663345.1	Assembled from SLRseq reads (SRP049776)
ENST00000657108.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671279.1	Assembled from RACEseq reads
ENST00000256509.7	MANE_select
ENST00000608098.1	nested 454 RNA-Seq supported
ENST00000657004.1	Assembled from SLRseq reads (SRP049776)
ENST00000661103.1	Assembled from SLRseq reads (SRP049776)
ENST00000656558.1	Assembled from SLRseq reads (SRP049776)
ENST00000661877.1	Assembled from SLRseq reads (SRP049776)
ENST00000668617.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655067.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664893.1	Assembled from SLRseq reads (SRP049776)
ENST00000667456.1	Assembled from SLRseq reads (SRP049776)
ENST00000661727.1	Assembled from SLRseq reads (SRP049776)
ENST00000653731.1	Assembled from SLRseq reads (SRP049776)
ENST00000446702.7	MANE_select
ENST00000422330.5	alternative 5' UTR
ENST00000418658.6	MANE_select
ENST00000418658.6	alternative 5' UTR
ENST00000455083.5	alternative 5' UTR
ENST00000438282.6	alternative 5' UTR
ENST00000434053.5	alternative 5' UTR
ENST00000397459.6	NP_783302.1
ENST00000473845.1	GENCODE experimental pipeline
ENST00000447256.2	GENCODE experimental pipeline
ENST00000668002.1	Assembled from RACEseq reads
ENST00000446632.7	MANE_select
ENST00000438560.5	GENCODE experimental pipeline
ENST00000256452.7	QC splicing correct
ENST00000256452.7	alternative 5' UTR
ENST00000311981.12	QC splicing correct
ENST00000311981.12	alternative 5' UTR
ENST00000430514.6	QC splicing correct
ENST00000430514.6	alternative 5' UTR
ENST00000445701.5	alternative 5' UTR
ENST00000427088.1	alternative 5' UTR
ENST00000339437.11	alternative 5' UTR
ENST00000251607.11	CAGE supported TSS
ENST00000251607.11	LR annotation
ENST00000251607.11	MANE_select
ENST00000397779.3	alternative 5' UTR
ENST00000420393.5	alternative 5' UTR
ENST00000402675.5	FLJ42143
ENST00000413000.1	alternative 5' UTR
ENST00000231948.9	CAGE supported TSS
ENST00000231948.9	MANE_select
ENST00000484993.1	GENCODE experimental pipeline
ENST00000272902.10	MANE_select
ENST00000319331.4	MANE_select
ENST00000319331.4	NP_065924.3
ENST00000472075.1	QC splicing correct
ENST00000661097.1	Assembled from SLRseq reads (SRP049776)
ENST00000654218.1	Assembled from SLRseq reads (SRP049776)
ENST00000658668.1	Assembled from SLRseq reads (SRP049776)
ENST00000653118.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000358065.4	NP_006506.3
ENST00000425863.5	GENCODE experimental pipeline
ENST00000358950.4	GENCODE experimental pipeline
ENST00000462115.1	GENCODE experimental pipeline
ENST00000412804.1	GENCODE experimental pipeline
ENST00000357086.10	QC splicing correct
ENST00000357086.10	non canonical conserved
ENST00000649015.2	MANE_select
ENST00000649015.2	confirm experimentally
ENST00000649015.2	non canonical conserved
ENST00000354582.11	non canonical conserved
ENST00000456211.8	QC splicing correct
ENST00000456211.8	non canonical conserved
ENST00000648266.1	non canonical conserved
ENST00000650294.1	NAGNAG splice site
ENST00000650294.1	non canonical conserved
ENST00000648309.1	confirm experimentally
ENST00000648309.1	non canonical conserved
ENST00000443694.4	QC splicing correct
ENST00000443694.4	non canonical conserved
ENST00000648038.1	non canonical conserved
ENST00000647717.1	NAGNAG splice site
ENST00000647717.1	non canonical conserved
ENST00000648431.1	non canonical conserved
ENST00000648212.1	non canonical conserved
ENST00000648016.1	NAGNAG splice site
ENST00000648564.1	NAGNAG splice site
ENST00000649139.1	CAGE supported TSS
ENST00000647685.1	CAGE supported TSS
ENST00000647685.1	alternative 5' UTR
ENST00000649908.1	CAGE supported TSS
ENST00000649908.1	alternative 5' UTR
ENST00000441386.3	Assembled from SLRseq reads (SRP049776)
ENST00000668962.1	Assembled from SLRseq reads (SRP049776)
ENST00000663474.1	Assembled from SLRseq reads (SRP049776)
ENST00000256495.4	MANE_select
ENST00000458338.1	P25063
ENST00000256496.8	MANE_select
ENST00000256497.9	MANE_select
ENST00000660158.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655754.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653839.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659876.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662846.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000414438.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658468.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669512.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667028.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671568.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668643.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655541.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671036.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661518.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658398.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655856.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669798.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655753.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659827.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663041.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655495.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661279.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662508.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667716.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668416.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658133.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659651.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000342990.4	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660054.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671370.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432743.1	QC splicing correct
ENST00000653883.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656063.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670757.1	Assembled from SLRseq reads (SRP049776)
ENST00000412629.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000357716.9	MANE_select
ENST00000486284.5	QC splicing correct
ENST00000440923.7	non canonical polymorphism
ENST00000445087.1	GENCODE experimental pipeline
ENST00000471242.2	QC splicing correct
ENST00000656900.1	Assembled from RACEseq reads
ENST00000652500.1	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000654635.1	Assembled from SLRseq reads (SRP049776)
ENST00000659617.1	Assembled from SLRseq reads (SRP049776)
ENST00000452802.6	Assembled from SLRseq reads (SRP049776)
ENST00000420095.2	Assembled from SLRseq reads (SRP049776)
ENST00000656911.1	Assembled from SLRseq reads (SRP049776)
ENST00000649560.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000649560.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000660701.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668618.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435368.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426878.2	GENCODE experimental pipeline
ENST00000157600.8	MANE_select
ENST00000341795.7	LOC51066
ENST00000544814.6	NP_001243677.1
ENST00000641144.1	ENA ID EGAS00001001486
ENST00000641144.1	NCBI GEO ID GSE80249
ENST00000343849.3	MANE_select
ENST00000316793.8	MANE_select
ENST00000316793.8	NP_000907
ENST00000449615.1	alternative 5' UTR
ENST00000431493.1	alternative 5' UTR
ENST00000264926.7	MANE_select
ENST00000418463.5	NMD likely if extended
ENST00000421052.5	NMD likely if extended
ENST00000413832.1	alternative 5' UTR
ENST00000383836.8	MANE_select
ENST00000669128.1	Assembled from SLRseq reads (SRP049776)
ENST00000449023.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661342.1	Assembled from SLRseq reads (SRP049776)
ENST00000664877.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657509.1	Assembled from SLRseq reads (SRP049776)
ENST00000654392.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654392.1	Assembled from SLRseq reads (SRP049776)
ENST00000665171.1	Assembled from SLRseq reads (SRP049776)
ENST00000668063.1	Assembled from SLRseq reads (SRP049776)
ENST00000522525.6	Assembled from SLRseq reads (SRP049776)
ENST00000660363.1	Assembled from SLRseq reads (SRP049776)
ENST00000665983.1	Assembled from SLRseq reads (SRP049776)
ENST00000661714.1	Assembled from SLRseq reads (SRP049776)
ENST00000481221.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000481221.7	Assembled from SLRseq reads (SRP049776)
ENST00000664441.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664441.1	Assembled from SLRseq reads (SRP049776)
ENST00000667458.1	Assembled from SLRseq reads (SRP049776)
ENST00000524210.2	Assembled from SLRseq reads (SRP049776)
ENST00000664273.1	Assembled from SLRseq reads (SRP049776)
ENST00000660127.1	Assembled from SLRseq reads (SRP049776)
ENST00000518437.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000522221.2	Assembled from SLRseq reads (SRP049776)
ENST00000417036.1	alternative 5' UTR
ENST00000419437.5	alternative 5' UTR
ENST00000452837.7	MANE_select
ENST00000452837.7	alternative 5' UTR
ENST00000515662.6	alternative 5' UTR
ENST00000416603.1	GENCODE experimental pipeline
ENST00000402198.7	MANE_select
ENST00000402198.7	alternative 5' UTR
ENST00000406341.5	QC splicing correct
ENST00000406341.5	alternative 5' UTR
ENST00000670063.1	DKFZp686J18276
ENST00000493918.5	KIAA1757
ENST00000466242.5	FLJ45365
ENST00000488236.5	QC splicing correct
ENST00000664993.1	NMD likely if extended
ENST00000287585.8	MANE_select
ENST00000296003.9	MANE_select
ENST00000431250.1	GENCODE experimental pipeline
ENST00000670966.1	Assembled from SLRseq reads (SRP049776)
ENST00000383831.7	QC splicing correct
ENST00000383832.8	MANE_select
ENST00000383832.8	QC splicing correct
ENST00000433861.6	GENCODE experimental pipeline
ENST00000383829.7	LR annotation
ENST00000383829.7	MANE_select
ENST00000420291.2	alternative 5' UTR
ENST00000424362.6	NAGNAG splice site
ENST00000426583.1	alternative 5' UTR
ENST00000344629.12	MANE_select
ENST00000302008.12	NP_058437.1
ENST00000383826.9	NP_058436.1
ENST00000426518.5	GENCODE experimental pipeline
ENST00000256460.8	MANE_select
ENST00000440161.5	alternative 5' UTR
ENST00000439043.1	alternative 5' UTR
ENST00000397261.8	MANE_select
ENST00000453882.1	GENCODE experimental pipeline
ENST00000418745.5	GENCODE experimental pipeline
ENST00000430718.5	alternative 5' UTR
ENST00000473661.5	QC splicing correct
ENST00000455274.5	GENCODE experimental pipeline
ENST00000423108.5	GENCODE experimental pipeline
ENST00000433535.6	NP_001136019.1
ENST00000679265.1	alternative 5' UTR
ENST00000336832.7	CAGE supported TSS
ENST00000336832.7	MANE_select
ENST00000647897.1	CAGE supported TSS
ENST00000647897.1	LR annotation
ENST00000647897.1	MANE_select
ENST00000383814.8	MANE_select
ENST00000403601.8	CAGE supported TSS
ENST00000403601.8	LR annotation
ENST00000403601.8	MANE_select
ENST00000397170.7	alternative 5' UTR
ENST00000383811.8	CAGE supported TSS
ENST00000383811.8	LR annotation
ENST00000452070.6	MANE_select
ENST00000452070.6	alternative 5' UTR
ENST00000435417.2	GENCODE experimental pipeline
ENST00000412055.6	MANE_select
ENST00000383808.7	Assembled from SLRseq reads (SRP049776)
ENST00000675286.1	MANE_select
ENST00000450660.3	MANE_select
ENST00000530758.2	MANE_select
ENST00000256474.3	MANE_select
ENST00000660063.1	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000256458.5	MANE_select
ENST00000448281.7	MANE_select
ENST00000335542.13	MANE_select
ENST00000437422.6	NP_001128416.1
ENST00000439975.6	NP_001128418.1
ENST00000449238.6	NP_001128417.1
ENST00000429122.1	alternative 5' UTR
ENST00000662597.1	Assembled from SLRseq reads (SRP049776)
ENST00000350697.8	MANE_select
ENST00000397102.5	GENCODE experimental pipeline
ENST00000432213.1	GENCODE experimental pipeline
ENST00000397077.6	LR annotation
ENST00000360273.7	MANE_select
ENST00000360273.7	genebuild_only_MANE
ENST00000646379.1	alternative 5' UTR
ENST00000419591.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664856.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664856.1	Assembled from SLRseq reads (SRP049776)
ENST00000436060.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440266.2	GENCODE experimental pipeline
ENST00000254488.7	MANE_select
ENST00000656787.1	Assembled from SLRseq reads (SRP049776)
ENST00000646702.1	alternative 5' UTR
ENST00000642767.1	alternative 5' UTR
ENST00000425938.6	upstream ATG
ENST00000642515.1	alternative 5' UTR
ENST00000643498.1	alternative 5' UTR
ENST00000646072.1	upstream ATG
ENST00000646570.1	alternative 5' UTR
ENST00000287766.10	MANE_select
ENST00000645281.1	alternative 5' UTR
ENST00000645281.1	upstream ATG
ENST00000642820.1	alternative 5' UTR
ENST00000645054.1	alternative 5' UTR
ENST00000642735.1	alternative 5' UTR
ENST00000646022.1	alternative 5' UTR
ENST00000645776.1	alternative 5' UTR
ENST00000645776.1	upstream ATG
ENST00000645592.1	alternative 5' UTR
ENST00000646924.1	alternative 5' UTR
ENST00000645974.1	alternative 5' UTR
ENST00000644314.1	alternative 5' UTR
ENST00000642639.1	alternative 5' UTR
ENST00000646060.1	alternative 5' UTR
ENST00000642201.1	alternative 5' UTR
ENST00000647194.1	alternative 5' UTR
ENST00000643396.1	alternative 5' UTR
ENST00000645029.1	alternative 5' UTR
ENST00000644175.1	alternative 5' UTR
ENST00000414969.2	GENCODE experimental pipeline
ENST00000657204.1	Assembled from SLRseq reads (SRP049776)
ENST00000667007.1	Assembled from SLRseq reads (SRP049776)
ENST00000438284.2	alternative 5' UTR
ENST00000431010.3	MANE_select
ENST00000431010.3	alternative 5' UTR
ENST00000413416.1	alternative 5' UTR
ENST00000648436.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000658562.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451513.5	alternative 5' UTR
ENST00000444619.5	alternative 5' UTR
ENST00000419112.5	alternative 5' UTR
ENST00000423116.1	alternative 5' UTR
ENST00000414717.5	GENCODE experimental pipeline
ENST00000430365.7	MANE_select
ENST00000413604.5	GENCODE experimental pipeline
ENST00000445411.5	alternative 5' UTR
ENST00000418000.5	alternative 5' UTR
ENST00000458499.5	GENCODE experimental pipeline
ENST00000417206.6	alternative 5' UTR
ENST00000424709.5	GENCODE experimental pipeline
ENST00000424709.5	alternative 5' UTR
ENST00000419541.4	alternative 5' UTR
ENST00000437722.1	GENCODE experimental pipeline
ENST00000437722.1	alternative 5' UTR
ENST00000623028.1	alternative 5' UTR
ENST00000623028.1	non canonical TEC
ENST00000414047.1	GENCODE experimental pipeline
ENST00000417723.1	QC splicing correct
ENST00000621198.5	MANE_select
ENST00000287814.5	MANE_select
ENST00000397010.7	alternative 5' UTR
ENST00000397010.7	upstream ATG
ENST00000397029.8	alternative 5' UTR
ENST00000397029.8	upstream ATG
ENST00000309576.11	alternative 5' UTR
ENST00000309576.11	upstream ATG
ENST00000397015.7	LR annotation
ENST00000397015.7	alternative 5' UTR
ENST00000397015.7	upstream ATG
ENST00000643888.2	alternative 5' UTR
ENST00000643888.2	upstream ATG
ENST00000643197.2	alternative 5' UTR
ENST00000643197.2	upstream ATG
ENST00000644622.2	alternative 5' UTR
ENST00000644622.2	upstream ATG
ENST00000455517.6	alternative 5' UTR
ENST00000455517.6	upstream ATG
ENST00000652522.1	alternative 5' UTR
ENST00000652522.1	upstream ATG
ENST00000651735.1	CAGE supported TSS
ENST00000651735.1	LR annotation
ENST00000651735.1	MANE_select
ENST00000651735.1	upstream ATG
ENST00000397026.7	upstream ATG
ENST00000438682.6	alternative 5' UTR
ENST00000438682.6	upstream ATG
ENST00000397000.6	GENCODE experimental pipeline
ENST00000397000.6	upstream ATG
ENST00000287820.10	NP_056953.2
ENST00000396999.3	upstream ATG
ENST00000680458.1	QC splicing correct
ENST00000681713.1	align_id:3677853|asmbl_168018
ENST00000679699.1	align_id:3677790|asmbl_167955
ENST00000679699.1	alternative 5' UTR
ENST00000446004.6	align_id:3677824|asmbl_167989
ENST00000681482.1	align_id:3677816|asmbl_167981
ENST00000679537.1	align_id:3677883|asmbl_168048
ENST00000680873.1	align_id:3677873|asmbl_168038
ENST00000681073.1	align_id:3677859|asmbl_168024
ENST00000680376.1	align_id:3677838|asmbl_168003
ENST00000681433.1	align_id:3677856|asmbl_168021
ENST00000475595.2	align_id:3677881|asmbl_168046
ENST00000679756.1	align_id:3677846|asmbl_168011
ENST00000681343.1	align_id:3677875|asmbl_168040
ENST00000679424.1	align_id:3677872|asmbl_168037
ENST00000680126.1	align_id:3677885|asmbl_168050
ENST00000415684.6	align_id:3677822|asmbl_167987
ENST00000455118.6	align_id:3677882|asmbl_168047
ENST00000412698.3	align_id:3677863|asmbl_168028
ENST00000680923.1	align_id:3677865|asmbl_168030
ENST00000679670.1	align_id:3677849|asmbl_168014
ENST00000680817.1	align_id:3677879|asmbl_168044
ENST00000284995.11	MANE_select
ENST00000402228.7	alternative 5' UTR
ENST00000679995.1	align_id:3677868|asmbl_168033
ENST00000680275.1	align_id:3677852|asmbl_168017
ENST00000681676.1	align_id:3677818|asmbl_167983
ENST00000681042.1	align_id:3677858|asmbl_168023
ENST00000679492.1	align_id:3677823|asmbl_167988
ENST00000680857.1	align_id:3677848|asmbl_168013
ENST00000679690.1	align_id:3677836|asmbl_168001
ENST00000490981.2	align_id:3677867|asmbl_168032
ENST00000680172.1	align_id:3677869|asmbl_168034
ENST00000680419.1	align_id:3677855|asmbl_168020
ENST00000680943.1	align_id:3677830|asmbl_167995
ENST00000681227.1	align_id:3677860|asmbl_168025
ENST00000679835.1	align_id:3677825|asmbl_167990
ENST00000679785.1	align_id:3677835|asmbl_168000
ENST00000680555.1	align_id:3677845|asmbl_168010
ENST00000680421.1	align_id:3677837|asmbl_168002
ENST00000679367.1	align_id:3677844|asmbl_168009
ENST00000681268.1	align_id:3677862|asmbl_168027
ENST00000679876.1	align_id:3677870|asmbl_168035
ENST00000444864.6	align_id:3677850|asmbl_168015
ENST00000679693.1	align_id:3677866|asmbl_168031
ENST00000680449.1	align_id:3677840|asmbl_168005
ENST00000681471.1	align_id:3677828|asmbl_167993
ENST00000680598.1	align_id:3677851|asmbl_168016
ENST00000680264.1	align_id:3677861|asmbl_168026
ENST00000679425.1	align_id:3677811|asmbl_167976
ENST00000681140.1	align_id:3677829|asmbl_167994
ENST00000680986.1	align_id:3677815|asmbl_167980
ENST00000680354.1	align_id:3677877|asmbl_168042
ENST00000679420.1	align_id:3677889|asmbl_168054
ENST00000567514.1	not organism-supported
ENST00000561645.2	QC splicing correct
ENST00000564146.3	not organism-supported
ENST00000447550.1	GENCODE experimental pipeline
ENST00000170447.12	MANE_select
ENST00000448482.1	GENCODE experimental pipeline
ENST00000442415.7	LR annotation
ENST00000442415.7	MANE_select
ENST00000314124.12	MANE_select
ENST00000264728.8	alternative 5' UTR
ENST00000456430.6	MANE_select
ENST00000650119.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000454887.1	GENCODE experimental pipeline
ENST00000429711.7	MANE_select
ENST00000435983.5	alternative 5' UTR
ENST00000396953.6	alternative 5' UTR
ENST00000457131.1	alternative 5' UTR
ENST00000434963.1	alternative 5' UTR
ENST00000613206.2	MANE_select
ENST00000647458.1	CAGE supported TSS
ENST00000254508.7	MANE_select
ENST00000254508.7	non canonical conserved
ENST00000485755.1	QC splicing correct
ENST00000420141.2	non canonical conserved
ENST00000424112.2	GENCODE experimental pipeline
ENST00000433119.5	GENCODE experimental pipeline
ENST00000402259.5	GENCODE experimental pipeline
ENST00000295757.8	MANE_select
ENST00000522202.5	NP_001129513.1
ENST00000416248.5	GENCODE experimental pipeline
ENST00000437379.2	not organism-supported
ENST00000495099.2	QC splicing correct
ENST00000404922.8	MANE_select
ENST00000404922.8	isoform a precursor
ENST00000295760.11	isoform b precursor
ENST00000465610.1	alternative 5' UTR
ENST00000492059.5	alternative 5' UTR
ENST00000295761.11	GENCODE experimental pipeline
ENST00000665476.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000285018.5	MANE_select
ENST00000489346.1	GENCODE experimental pipeline
ENST00000429201.6	QC splicing correct
ENST00000429201.6	alternative 5' UTR
ENST00000532924.5	QC splicing correct
ENST00000532924.5	alternative 5' UTR
ENST00000528040.1	alternative 5' UTR
ENST00000661964.1	Assembled from SLRseq reads (SRP049776)
ENST00000295767.9	NP_653237.1
ENST00000396914.4	MANE_select
ENST00000396914.4	NP_001091972.1
ENST00000306077.5	MANE_select
ENST00000608606.1	nested 454 RNA-Seq supported
ENST00000428681.3	CAGE supported TSS
ENST00000285021.12	MANE_select
ENST00000306024.4	MANE_select
ENST00000502417.1	FLJ23502
ENST00000649500.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000452775.1	alternative 5' UTR
ENST00000621039.5	MANE_select
ENST00000424242.1	GENCODE experimental pipeline
ENST00000383794.7	MANE_select
ENST00000253697.8	MANE_select
ENST00000412910.1	alternative 5' UTR
ENST00000422657.1	GENCODE experimental pipeline
ENST00000649475.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000285046.10	MANE_select
ENST00000655923.1	Assembled from SLRseq reads (SRP049776)
ENST00000665738.1	Assembled from SLRseq reads (SRP049776)
ENST00000665449.1	Assembled from SLRseq reads (SRP049776)
ENST00000661022.1	Assembled from SLRseq reads (SRP049776)
ENST00000413118.5	alternative 5' UTR
ENST00000435454.5	alternative 5' UTR
ENST00000393102.7	alternative 5' UTR
ENST00000437120.5	alternative 5' UTR
ENST00000439011.5	GENCODE experimental pipeline
ENST00000413194.1	GENCODE experimental pipeline
ENST00000253686.7	MANE_select
ENST00000253699.7	MANE_select
ENST00000446690.2	DIVA
ENST00000253693.7	MANE_select
ENST00000668440.1	Assembled from SLRseq reads (SRP049776)
ENST00000659956.1	Assembled from SLRseq reads (SRP049776)
ENST00000436602.2	Assembled from SLRseq reads (SRP049776)
ENST00000413977.2	Assembled from SLRseq reads (SRP049776)
ENST00000655760.1	Assembled from RACEseq reads
ENST00000383791.8	MANE_select
ENST00000383791.8	NP_004835.2
ENST00000383791.8	isoform a
ENST00000412806.1	Genoscope mRNA only
ENST00000426925.5	alternative 5' UTR
ENST00000408919.7	NP_001018009.2
ENST00000366391.6	alternative 5' UTR
ENST00000450625.1	alternative 5' UTR
ENST00000417936.5	alternative 5' UTR
ENST00000443029.5	alternative 3' UTR
ENST00000458728.5	GENCODE experimental pipeline
ENST00000383790.8	MANE_select
ENST00000383790.8	NP_689609.2
ENST00000450816.6	GENCODE experimental pipeline
ENST00000598878.1	alternative 5' UTR
ENST00000396842.7	MANE_select
ENST00000608780.1	454 RNA-Seq supported
ENST00000610011.1	nested 454 RNA-Seq supported
ENST00000383788.10	MANE_select
ENST00000604401.2	GENCODE experimental pipeline
ENST00000603808.5	GENCODE experimental pipeline
ENST00000603808.5	The majority of supporting mRNAs are from a patient with CMS syndrome so the non-canonical splicing between exons 15 and 16 is likely  to be disease specific
ENST00000603808.5	non canonical other
ENST00000659348.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000321169.10	MANE_select
ENST00000451445.6	GENCODE experimental pipeline
ENST00000449107.7	upstream ATG
ENST00000673620.1	upstream ATG
ENST00000303498.10	alternative 5' UTR
ENST00000417015.3	NP_001268655
ENST00000417015.3	upstream ATG
ENST00000643237.3	MANE_select
ENST00000643237.3	upstream ATG
ENST00000672141.1	upstream ATG
ENST00000480711.1	GENCODE experimental pipeline
ENST00000646371.1	alternative 5' UTR
ENST00000672427.1	upstream ATG
ENST00000672336.1	alternative 5' UTR
ENST00000673467.1	upstream ATG
ENST00000672760.1	upstream ATG
ENST00000437172.6	GENCODE experimental pipeline
ENST00000437172.6	upstream ATG
ENST00000436193.5	alternative 5' UTR
ENST00000654595.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655579.1	Assembled from RACEseq reads
ENST00000339732.10	MANE_select
ENST00000437509.3	GENCODE experimental pipeline
ENST00000470031.1	GENCODE experimental pipeline
ENST00000648063.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000488423.2	MANE_select
ENST00000605932.5	alternative 3' UTR
ENST00000442255.5	QC splicing correct
ENST00000435829.6	alternative 3' UTR
ENST00000285083.10	MANE_select
ENST00000606098.1	not organism-supported
ENST00000334133.9	MANE_select
ENST00000451036.5	alternative 5' UTR
ENST00000470458.1	GENCODE experimental pipeline
ENST00000449415.5	alternative 5' UTR
ENST00000453536.5	QC splicing correct
ENST00000431547.1	alternative 5' UTR
ENST00000653928.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658475.1	Assembled from SLRseq reads (SRP049776)
ENST00000661221.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669122.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659804.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660612.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660552.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655456.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669844.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000429949.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660669.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660669.1	GENCODE experimental pipeline
ENST00000664830.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663672.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663006.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656250.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661146.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670078.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667160.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000399444.7	MANE_select
ENST00000615277.5	MANE_select
ENST00000649558.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000429383.8	QC splicing correct
ENST00000429383.8	alternative 5' UTR
ENST00000414318.2	QC splicing correct
ENST00000415814.6	alternative 5' UTR
ENST00000507877.5	alternative 5' UTR
ENST00000665745.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000449613.1	GENCODE experimental pipeline
ENST00000338745.11	MANE_select
ENST00000338745.11	alternative 5' UTR
ENST00000454909.6	alternative 5' UTR
ENST00000440737.5	alternative 5' UTR
ENST00000452260.6	alternative 5' UTR
ENST00000415069.5	alternative 5' UTR
ENST00000457005.5	alternative 5' UTR
ENST00000414509.5	alternative 5' UTR
ENST00000487699.1	alternative 5' UTR
ENST00000444341.1	alternative 5' UTR
ENST00000450898.1	alternative 5' UTR
ENST00000629405.2	non canonical TEC
ENST00000425799.6	QC splicing correct
ENST00000328405.7	MANE_select
ENST00000670571.1	Assembled from SLRseq reads (SRP049776)
ENST00000668274.1	Assembled from SLRseq reads (SRP049776)
ENST00000670202.1	Assembled from SLRseq reads (SRP049776)
ENST00000295824.14	MANE_select
ENST00000344838.8	FLJ16028
ENST00000344838.8	GENCODE experimental pipeline
ENST00000467602.5	GENCODE experimental pipeline
ENST00000273047.9	MANE_select
ENST00000443878.1	alternative 5' UTR
ENST00000422242.1	GENCODE experimental pipeline
ENST00000389050.5	MANE_select
ENST00000389050.5	QC splicing correct
ENST00000263754.5	MANE_select
ENST00000425061.5	alternative 5' UTR
ENST00000443724.5	alternative 5' UTR
ENST00000421451.5	alternative 5' UTR
ENST00000452020.5	alternative 5' UTR
ENST00000412997.6	Isoform A1
ENST00000412997.6	MANE_select
ENST00000437051.5	Isoform B1
ENST00000417364.1	alternative 5' UTR
ENST00000448208.5	GENCODE experimental pipeline
ENST00000455626.1	QC splicing correct
ENST00000281523.8	MANE_select
ENST00000469927.5	GENCODE experimental pipeline
ENST00000662195.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670967.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000425792.5	alternative 5' UTR
ENST00000396703.6	MANE_select
ENST00000306627.8	Isoform 1
ENST00000306627.8	MANE_select
ENST00000346855.7	Isoform 2
ENST00000481622.1	GENCODE experimental pipeline
ENST00000442670.5	alternative 5' UTR
ENST00000425478.7	MANE_select
ENST00000425478.7	alternative 5' UTR
ENST00000443659.6	QC splicing correct
ENST00000443659.6	alternative 5' UTR
ENST00000421515.6	alternative 5' UTR
ENST00000437230.5	Genoscope mRNA only
ENST00000437230.5	alternative 5' UTR
ENST00000412028.5	Genoscope mRNA only
ENST00000415901.6	Genoscope mRNA only
ENST00000415901.6	alternative 5' UTR
ENST00000416026.2	alternative 5' UTR
ENST00000422218.5	GENCODE experimental pipeline
ENST00000422218.5	alternative 5' UTR
ENST00000434031.6	alternative 5' UTR
ENST00000307839.10	MANE_select
ENST00000307839.10	corf
ENST00000413699.7	CAGE supported TSS
ENST00000413699.7	LR annotation
ENST00000413699.7	alternative 5' UTR
ENST00000645079.1	alternative 5' UTR
ENST00000456530.7	NP_001240313.1
ENST00000412097.5	QC splicing correct
ENST00000412097.5	alternative 5' UTR
ENST00000415719.5	QC splicing correct
ENST00000415719.5	alternative 5' UTR
ENST00000644185.1	alternative 5' UTR
ENST00000643707.1	CAGE supported TSS
ENST00000643707.1	alternative 5' UTR
ENST00000354811.5	CAGE supported TSS
ENST00000354811.5	alternative 5' UTR
ENST00000312521.9	MANE_select
ENST00000396671.7	corfl
ENST00000646209.2	MANE_select
ENST00000356447.9	CAGE supported TSS
ENST00000356447.9	LR annotation
ENST00000356447.9	alternative 5' UTR
ENST00000646432.1	alternative 5' UTR
ENST00000643772.1	alternative 5' UTR
ENST00000645139.1	alternative 5' UTR
ENST00000642307.1	alternative 5' UTR
ENST00000644321.1	alternative 5' UTR
ENST00000416420.5	alternative 5' UTR
ENST00000280696.9	CAGE supported TSS
ENST00000280696.9	GENCODE experimental pipeline
ENST00000447875.5	alternative 5' UTR
ENST00000453729.6	alternative 5' UTR
ENST00000431815.5	alternative 5' UTR
ENST00000447414.5	alternative 5' UTR
ENST00000428492.5	alternative 5' UTR
ENST00000418247.1	alternative 5' UTR
ENST00000438096.1	GENCODE experimental pipeline
ENST00000629562.3	Assembled from SLRseq reads (SRP049776)
ENST00000608068.1	nested 454 RNA-Seq supported
ENST00000437042.6	isoform 2
ENST00000330688.9	MANE_select
ENST00000489694.5	GENCODE experimental pipeline
ENST00000458646.1	alternative 5' UTR
ENST00000424225.1	alternative 5' UTR
ENST00000280700.10	MANE_select
ENST00000427041.1	GENCODE experimental pipeline
ENST00000464688.1	GENCODE experimental pipeline
ENST00000452098.1	alternative 5' UTR
ENST00000280701.8	MANE_select
ENST00000449808.1	Probable_NMD_if_extended
ENST00000428266.1	alternative 5' UTR
ENST00000655652.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451284.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435884.2	Assembled from SLRseq reads (SRP049776)
ENST00000414619.1	alternative 5' UTR
ENST00000648296.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000432040.1	alternative 5' UTR
ENST00000417744.5	alternative 5' UTR
ENST00000456208.2	alternative 5' UTR
ENST00000383771.8	NP_001026911.1
ENST00000429845.6	confirm experimentally
ENST00000474938.1	GENCODE experimental pipeline
ENST00000435750.1	alternative 5' UTR
ENST00000661166.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000295736.9	NP_003606.3
ENST00000428179.1	not organism-supported
ENST00000607601.2	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000606069.1	CAGE supported TSS
ENST00000449599.4	MANE_select
ENST00000653125.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659724.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670769.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669745.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661836.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667173.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663406.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653500.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663074.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656964.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668591.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670767.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660818.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663111.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665634.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660141.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655422.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654194.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668400.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669211.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663087.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665057.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664737.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668917.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668561.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654315.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660828.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660687.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669343.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652951.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658403.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655661.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665786.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653311.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665921.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656488.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667872.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000466830.6	MANE_select
ENST00000429369.5	GENCODE experimental pipeline
ENST00000479665.6	MANE_select
ENST00000334100.10	NP_001127905.1
ENST00000420543.6	NP_001127904.1
ENST00000457172.5	alternative 5' UTR
ENST00000414162.5	alternative 5' UTR
ENST00000415852.1	alternative 5' UTR
ENST00000383768.7	MANE_select
ENST00000420223.5	alternative 5' UTR
ENST00000428875.1	GENCODE experimental pipeline
ENST00000636680.2	CAGE supported TSS
ENST00000636900.1	CAGE supported TSS
ENST00000383767.7	MANE_select
ENST00000383767.7	NM_001003793.1
ENST00000273139.13	NM_014483.2
ENST00000383766.6	NM_001003792.1
ENST00000655701.1	Assembled from SLRseq reads (SRP049776)
ENST00000664598.1	Assembled from SLRseq reads (SRP049776)
ENST00000658006.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000629416.2	non canonical TEC
ENST00000414547.1	GENCODE experimental pipeline
ENST00000659869.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000657930.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657930.1	GENCODE experimental pipeline
ENST00000450746.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654195.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658053.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669765.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667530.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665424.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000295754.10	CAGE supported TSS
ENST00000295754.10	LR annotation
ENST00000295754.10	MANE_select
ENST00000359013.4	LR annotation
ENST00000673203.1	SLR-seq_TB0000032
ENST00000282538.9	NP_997242.2
ENST00000295770.4	MANE_select
ENST00000396556.7	MANE_select
ENST00000360311.5	MANE_select
ENST00000429432.5	alternative 5' UTR
ENST00000282541.10	MANE_select
ENST00000425459.5	GENCODE experimental pipeline
ENST00000307526.4	MANE_select
ENST00000334983.10	MANE_select
ENST00000205636.4	MANE_select
ENST00000273130.9	MANE_select
ENST00000494439.5	non canonical other
ENST00000494439.5	non-canonical splice donor site between exon 2 and exon 3
ENST00000454516.7	NP_001243671.1
ENST00000430408.1	GENCODE experimental pipeline
ENST00000383763.6	MANE_select
ENST00000330953.6	MANE_select
ENST00000399402.7	Isoform b
ENST00000307363.10	Isoform a
ENST00000307363.10	MANE_select
ENST00000481581.1	GENCODE experimental pipeline
ENST00000440656.1	GENCODE experimental pipeline
ENST00000450835.1	GENCODE experimental pipeline
ENST00000436768.1	GENCODE experimental pipeline
ENST00000416695.6	Isoform 2
ENST00000342462.5	Isoform 1
ENST00000342462.5	MANE_select
ENST00000320954.11	MANE_select
ENST00000449224.1	GENCODE experimental pipeline
ENST00000309558.8	MANE_select
ENST00000484457.6	MANE_select
ENST00000283627.10	QC splicing correct
ENST00000422741.5	QC splicing correct
ENST00000283629.8	MANE_select
ENST00000283628.9	alternative 5' UTR
ENST00000456378.1	alternative 5' UTR
ENST00000461133.8	QC splicing correct
ENST00000487553.5	GENCODE experimental pipeline
ENST00000604982.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648706.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000307296.8	MANE_select
ENST00000482561.1	not organism-supported
ENST00000654751.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660133.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659000.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667060.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671575.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655439.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659868.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659641.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664996.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670306.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670897.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656064.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655660.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665711.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670158.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665018.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660092.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657826.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665082.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660434.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658600.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659779.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664458.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656055.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655650.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662710.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661678.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660055.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669904.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000658638.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667627.1	Assembled from SLRseq reads (SRP049776)
ENST00000654398.1	Assembled from SLRseq reads (SRP049776)
ENST00000450234.5	alternative 5' UTR
ENST00000428373.5	NP_001020239.1
ENST00000428373.5	NP_001020240.1
ENST00000428373.5	NP_938409.1
ENST00000421492.5	alternative 5' UTR
ENST00000449196.5	alternative 5' UTR
ENST00000187397.8	NP_057384.2
ENST00000452563.5	alternative 5' UTR
ENST00000438577.5	alternative 5' UTR
ENST00000419330.5	alternative 5' UTR
ENST00000427542.5	QC splicing correct
ENST00000427542.5	alternative 5' UTR
ENST00000474696.5	alternative 5' UTR
ENST00000412048.5	alternative 5' UTR
ENST00000396482.6	alternative 5' UTR
ENST00000432682.5	alternative 5' UTR
ENST00000413378.5	alternative 5' UTR
ENST00000396481.6	alternative 5' UTR
ENST00000441454.5	alternative 5' UTR
ENST00000436702.5	alternative 5' UTR
ENST00000438071.1	alternative 5' UTR
ENST00000446068.6	QC splicing correct
ENST00000415706.1	GENCODE experimental pipeline
ENST00000273183.8	MANE_select
ENST00000427486.5	QC splicing correct
ENST00000416516.2	NP_208382.1
ENST00000636136.1	CAGE supported TSS
ENST00000645898.2	MANE_select
ENST00000463764.2	GENCODE experimental pipeline
ENST00000322716.8	MANE_select
ENST00000231790.8	MANE_select
ENST00000674019.1	CAGE supported TSS
ENST00000455445.6	alternative 5' UTR
ENST00000539477.6	CAGE supported TSS
ENST00000539477.6	alternative 5' UTR
ENST00000435176.5	CAGE supported TSS
ENST00000429117.5	alternative 5' UTR
ENST00000441265.6	CAGE supported TSS
ENST00000336686.9	MANE_select
ENST00000416425.5	GENCODE experimental pipeline
ENST00000438374.5	alternative 5' UTR
ENST00000434749.5	alternative 5' UTR
ENST00000436858.5	alternative 5' UTR
ENST00000452742.5	alternative 5' UTR
ENST00000450863.6	QC splicing correct
ENST00000654228.1	Assembled from RACEseq reads
ENST00000665000.1	Assembled from SLRseq reads (SRP049776)
ENST00000654714.1	Assembled from SLRseq reads (SRP049776)
ENST00000662797.1	Assembled from SLRseq reads (SRP049776)
ENST00000425932.5	alternative 5' UTR
ENST00000328376.9	NP_848029.2
ENST00000328376.9	upstream uORF
ENST00000332506.7	GENCODE experimental pipeline
ENST00000426078.5	NP_848032.1
ENST00000426078.5	upstream uORF
ENST00000661769.1	Assembled from SLRseq reads (SRP049776)
ENST00000669217.1	Assembled from SLRseq reads (SRP049776)
ENST00000425564.2	alternative 5' UTR
ENST00000425564.2	upstream uORF
ENST00000264741.10	MANE_select
ENST00000264741.10	NP_002198.2
ENST00000653023.1	Assembled from SLRseq reads (SRP049776)
ENST00000663634.1	Assembled from SLRseq reads (SRP049776)
ENST00000653850.1	Assembled from SLRseq reads (SRP049776)
ENST00000663533.1	Assembled from SLRseq reads (SRP049776)
ENST00000653285.1	Assembled from SLRseq reads (SRP049776)
ENST00000661580.1	Assembled from SLRseq reads (SRP049776)
ENST00000449586.1	GENCODE experimental pipeline
ENST00000655095.1	Assembled from SLRseq reads (SRP049776)
ENST00000667507.1	Assembled from SLRseq reads (SRP049776)
ENST00000660790.1	Assembled from SLRseq reads (SRP049776)
ENST00000630762.3	Assembled from SLRseq reads (SRP049776)
ENST00000420870.6	Assembled from SLRseq reads (SRP049776)
ENST00000659504.1	Assembled from SLRseq reads (SRP049776)
ENST00000670835.1	Assembled from SLRseq reads (SRP049776)
ENST00000657484.1	Assembled from SLRseq reads (SRP049776)
ENST00000660349.1	Assembled from SLRseq reads (SRP049776)
ENST00000660845.1	Assembled from SLRseq reads (SRP049776)
ENST00000666414.1	Assembled from SLRseq reads (SRP049776)
ENST00000660689.1	Assembled from SLRseq reads (SRP049776)
ENST00000664002.1	Assembled from SLRseq reads (SRP049776)
ENST00000273179.10	MANE_select
ENST00000447745.5	GENCODE experimental pipeline
ENST00000283713.10	NP_056957.3
ENST00000416303.5	alternative 5' UTR
ENST00000492491.6	alternative 5' UTR
ENST00000465644.5	Genoscope mRNA only
ENST00000334661.5	MANE_select
ENST00000463876.5	NP_001124436.1
ENST00000473834.1	GENCODE experimental pipeline
ENST00000308059.11	MANE_select
ENST00000451419.1	GENCODE experimental pipeline
ENST00000333167.13	MANE_select
ENST00000333167.13	NP_001598.1
ENST00000450296.5	Genoscope mRNA only
ENST00000396334.8	NP_002459.2
ENST00000396334.8	upstream ATG
ENST00000417037.8	upstream ATG
ENST00000650112.2	upstream ATG
ENST00000651800.2	upstream ATG
ENST00000421516.3	upstream ATG
ENST00000650905.2	CAGE supported TSS
ENST00000650905.2	LR annotation
ENST00000650905.2	MANE_select
ENST00000650905.2	upstream ATG
ENST00000446845.5	GENCODE experimental pipeline
ENST00000311806.8	MANE_select
ENST00000311856.9	MANE_select
ENST00000649621.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000448498.5	alternative 5' UTR
ENST00000427323.5	GENCODE experimental pipeline
ENST00000207870.8	MANE_select
ENST00000649234.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000487569.1	GENCODE experimental pipeline
ENST00000441531.1	GENCODE experimental pipeline
ENST00000352511.5	MANE_select
ENST00000287675.10	MANE_select
ENST00000414099.6	NP_001092875.1
ENST00000413689.6	LR annotation
ENST00000413689.6	NP_001092874.1
ENST00000423572.7	MANE_select
ENST00000327956.6	alternative 5' UTR
ENST00000449082.3	MANE_select
ENST00000449082.3	non canonical U12
ENST00000449082.3	non canonical conserved
ENST00000643924.1	NAGNAG splice site
ENST00000643924.1	non canonical U12
ENST00000643924.1	non canonical conserved
ENST00000432250.1	GENCODE experimental pipeline
ENST00000302328.9	CAGE supported TSS
ENST00000302328.9	MANE_select
ENST00000302328.9	lbeit not currently associated with this gene
ENST00000668754.1	CAGE supported TSS
ENST00000668754.1	at/ac splicing between exons 2 and 3
ENST00000668754.1	at/ac splicing between exons 23 and 24
ENST00000456224.7	QC splicing correct
ENST00000456224.7	at/ac splicing between exons 2 and 3
ENST00000456224.7	at/ac splicing between exons 23 and 24
ENST00000444237.2	AT/AC splicing between exons 23 and 24
ENST00000444237.2	at/ac splicing between exons 2 and 3
ENST00000302313.10	MANE_select
ENST00000441361.1	GENCODE experimental pipeline
ENST00000319283.8	MANE_select
ENST00000319283.8	corf
ENST00000422110.6	GENCODE experimental pipeline
ENST00000427459.4	GENCODE experimental pipeline
ENST00000416741.5	GENCODE experimental pipeline
ENST00000411813.5	NMD likely if extended
ENST00000413243.3	NMD likely if extended
ENST00000493751.1	GENCODE experimental pipeline
ENST00000440121.1	Sw:Q8NDW8-6.2
ENST00000273153.10	MANE_select
ENST00000273153.10	corf
ENST00000514182.1	alternative 5' UTR
ENST00000669199.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000340369.4	MANE_select
ENST00000664840.1	Assembled from SLRseq reads (SRP049776)
ENST00000656239.1	Assembled from SLRseq reads (SRP049776)
ENST00000399220.3	MANE_select
ENST00000435290.1	alternative 5' UTR
ENST00000412814.1	alternative 5' UTR
ENST00000655387.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000326306.5	MANE_select
ENST00000650617.1	CAGE supported TSS
ENST00000650617.1	LR annotation
ENST00000650617.1	MANE_select
ENST00000648579.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000645280.1	CAGE supported TSS
ENST00000643672.1	CAGE supported TSS
ENST00000642978.1	CAGE supported TSS
ENST00000301821.11	MANE_select
ENST00000458478.5	alternative 5' UTR
ENST00000657344.1	Assembled from SLRseq reads (SRP049776)
ENST00000662277.1	Assembled from SLRseq reads (SRP049776)
ENST00000451925.5	alternative 5' UTR
ENST00000428261.5	alternative 5' UTR
ENST00000415443.5	alternative 5' UTR
ENST00000447324.5	alternative 5' UTR
ENST00000436143.6	GENCODE experimental pipeline
ENST00000441980.6	alternative 5' UTR
ENST00000648447.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000444716.5	alternative 5' UTR
ENST00000302541.11	MANE_select
ENST00000657703.1	Assembled from SLRseq reads (SRP049776)
ENST00000655651.1	Assembled from SLRseq reads (SRP049776)
ENST00000657144.1	Assembled from SLRseq reads (SRP049776)
ENST00000631175.3	Assembled from SLRseq reads (SRP049776)
ENST00000661550.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000661550.1	Assembled from SLRseq reads (SRP049776)
ENST00000663919.1	Assembled from SLRseq reads (SRP049776)
ENST00000629723.2	Assembled from SLRseq reads (SRP049776)
ENST00000668232.1	Assembled from SLRseq reads (SRP049776)
ENST00000663881.1	Assembled from SLRseq reads (SRP049776)
ENST00000232905.4	MANE_select
ENST00000669707.1	Assembled from SLRseq reads (SRP049776)
ENST00000668358.1	Assembled from SLRseq reads (SRP049776)
ENST00000420850.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000420850.2	Assembled from SLRseq reads (SRP049776)
ENST00000420850.2	GENCODE experimental pipeline
ENST00000301825.8	MANE_select
ENST00000647765.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000456402.5	alternative 5' UTR
ENST00000445129.1	GENCODE experimental pipeline
ENST00000445129.1	alternative 5' UTR
ENST00000396203.7	MANE_select
ENST00000396203.7	alternative 5' UTR
ENST00000432264.4	MANE_select
ENST00000432264.4	NP_001138565.1
ENST00000522736.5	NP_001138566
ENST00000521353.5	NP_001138554.1
ENST00000649142.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000420891.5	alternative 5' UTR
ENST00000314529.10	MANE_select
ENST00000418905.1	GENCODE experimental pipeline
ENST00000403205.6	alternative 5' UTR
ENST00000339296.10	MANE_select
ENST00000453351.1	alternative 5' UTR
ENST00000456335.1	GENCODE experimental pipeline
ENST00000665970.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000412811.1	GENCODE experimental pipeline
ENST00000659692.1	Assembled from SLRseq reads (SRP049776)
ENST00000453828.1	GENCODE experimental pipeline
ENST00000415774.1	QC splicing correct
ENST00000643541.1	alternative 5' UTR
ENST00000426215.5	GENCODE experimental pipeline
ENST00000426215.5	NAGNAG splice site
ENST00000426215.5	alternative 5' UTR
ENST00000645210.1	NAGNAG splice site
ENST00000645210.1	alternative 5' UTR
ENST00000646381.1	alternative 5' UTR
ENST00000405570.6	alternative 3' UTR
ENST00000405570.6	alternative 5' UTR
ENST00000642248.1	NAGNAG splice site
ENST00000642248.1	alternative 3' UTR
ENST00000642248.1	alternative 5' UTR
ENST00000433400.6	alternative 3' UTR
ENST00000433400.6	alternative 5' UTR
ENST00000642992.1	alternative 5' UTR
ENST00000431914.6	alternative 3' UTR
ENST00000431914.6	alternative 5' UTR
ENST00000642836.1	alternative 5' UTR
ENST00000396185.8	alternative 3' UTR
ENST00000644678.1	alternative 3' UTR
ENST00000644678.1	alternative 5' UTR
ENST00000396183.7	alternative 3' UTR
ENST00000643031.1	NAGNAG splice site
ENST00000643031.1	alternative 3' UTR
ENST00000645982.1	alternative 3' UTR
ENST00000645982.1	confirm experimentally
ENST00000645982.1	non canonical TEC
ENST00000453024.6	alternative 3' UTR
ENST00000453024.6	alternative 5' UTR
ENST00000645900.1	alternative 3' UTR
ENST00000645900.1	alternative 5' UTR
ENST00000646174.1	alternative 3' UTR
ENST00000646174.1	alternative 5' UTR
ENST00000643992.1	alternative 3' UTR
ENST00000647390.1	alternative 3' UTR
ENST00000647390.1	alternative 5' UTR
ENST00000488914.2	NMD likely if extended
ENST00000642426.1	alternative 3' UTR
ENST00000642426.1	alternative 5' UTR
ENST00000349496.11	MANE_select
ENST00000646116.1	alternative 3' UTR
ENST00000646116.1	alternative 5' UTR
ENST00000644873.1	NAGNAG splice site
ENST00000644867.1	alternative 5' UTR
ENST00000646725.1	alternative 3' UTR
ENST00000646725.1	alternative 5' UTR
ENST00000645493.1	alternative 3' UTR
ENST00000645493.1	alternative 5' UTR
ENST00000646369.1	alternative 3' UTR
ENST00000646369.1	alternative 5' UTR
ENST00000647413.1	alternative 5' UTR
ENST00000643977.1	alternative 5' UTR
ENST00000644524.1	alternative 5' UTR
ENST00000643297.1	alternative 5' UTR
ENST00000450969.6	alternative 3' UTR
ENST00000450969.6	alternative 5' UTR
ENST00000642315.1	alternative 3' UTR
ENST00000642315.1	alternative 5' UTR
ENST00000645320.1	alternative 5' UTR
ENST00000441708.2	alternative 3' UTR
ENST00000441708.2	alternative 5' UTR
ENST00000471014.2	GENCODE experimental pipeline
ENST00000471014.2	alternative 3' UTR
ENST00000301831.9	MANE_select
ENST00000420927.5	GENCODE experimental pipeline
ENST00000420927.5	alternative 5' UTR
ENST00000673621.2	CAGE supported TSS
ENST00000673621.2	confirm experimentally
ENST00000327628.10	MANE_select
ENST00000449246.5	GENCODE experimental pipeline
ENST00000427771.1	GENCODE experimental pipeline
ENST00000434608.1	alternative 5' UTR
ENST00000396169.7	MANE_select
ENST00000396169.7	alternative 5' UTR
ENST00000441172.1	alternative 5' UTR
ENST00000287748.8	MANE_select
ENST00000450274.5	GENCODE experimental pipeline
ENST00000439731.5	GENCODE experimental pipeline
ENST00000325123.5	MANE_select
ENST00000608869.1	nested 454 RNA-Seq supported
ENST00000610022.1	nested 454 RNA-Seq supported
ENST00000264454.8	MANE_select
ENST00000417572.5	alternative 5' UTR
ENST00000456515.5	GENCODE experimental pipeline
ENST00000456515.5	alternative 5' UTR
ENST00000450981.5	alternative 5' UTR
ENST00000416880.5	alternative 5' UTR
ENST00000447630.5	alternative 5' UTR
ENST00000011691.6	MANE_select
ENST00000232978.13	MANE_select
ENST00000438017.5	QC splicing correct
ENST00000445452.1	QC splicing correct
ENST00000653434.1	Assembled from SLRseq reads (SRP049776)
ENST00000668806.1	Assembled from SLRseq reads (SRP049776)
ENST00000232974.11	MANE_select
ENST00000232974.11	NP_660149.2
ENST00000505904.1	QC splicing correct
ENST00000663852.1	Assembled from SLRseq reads (SRP049776)
ENST00000287777.5	MANE_select
ENST00000441594.6	MANE_select
ENST00000441594.6	alternative 5' UTR
ENST00000457462.5	GENCODE experimental pipeline
ENST00000416756.5	alternative 5' UTR
ENST00000600839.3	Assembled from SLRseq reads (SRP049776)
ENST00000310232.11	MANE_select
ENST00000435327.2	NMD if extended
ENST00000648550.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000671400.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665649.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418161.2	Assembled from SLRseq reads (SRP049776)
ENST00000321331.12	MANE_select
ENST00000418900.6	alternative 5' UTR
ENST00000452906.3	NP_001093138.1
ENST00000422265.6	MANE_select
ENST00000442925.5	alternative 5' UTR
ENST00000497921.2	alternative 5' UTR
ENST00000492609.1	alternative 5' UTR
ENST00000494619.1	alternative 5' UTR
ENST00000493193.1	alternative 5' UTR
ENST00000451200.6	NMD likely if extended
ENST00000418093.2	NMD likely if extended
ENST00000383748.9	MANE_select
ENST00000437102.1	GENCODE experimental pipeline
ENST00000316161.6	MANE_select
ENST00000440367.7	MANE_select
ENST00000430121.3	MANE_select
ENST00000441964.1	alternative 5' UTR
ENST00000344697.3	MANE_select
ENST00000649466.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000429705.6	alternative 5' UTR
ENST00000296088.12	MANE_select
ENST00000296088.12	alternative 5' UTR
ENST00000468628.2	GENCODE experimental pipeline
ENST00000607513.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000292246.8	MANE_select
ENST00000414522.6	GENCODE experimental pipeline
ENST00000448045.1	GENCODE experimental pipeline
ENST00000444344.5	alternative 5' UTR
ENST00000456438.5	alternative 5' UTR
ENST00000436073.1	alternative 5' UTR
ENST00000649763.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000644371.2	LR annotation
ENST00000644371.2	MANE_select
ENST00000642351.1	CAGE supported TSS
ENST00000463153.2	alternative 3' UTR
ENST00000606217.1	CAGE supported TSS
ENST00000309765.4	MANE_select
ENST00000383746.7	NP_001025011.1
ENST00000417237.5	alternative 5' UTR
ENST00000396078.7	alternative 5' UTR
ENST00000342649.9	MANE_select
ENST00000342649.9	NP_776187.2
ENST00000636468.1	CAGE supported TSS
ENST00000634998.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000634998.2	CAGE supported TSS
ENST00000663017.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000396077.8	MANE_select
ENST00000650400.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000426540.6	MANE_select
ENST00000426540.6	alternative 5' UTR
ENST00000431636.5	alternative 5' UTR
ENST00000341840.7	NP_079445.1
ENST00000273320.7	NP_061121.2
ENST00000447279.2	GENCODE experimental pipeline
ENST00000416644.5	alternative 5' UTR
ENST00000441021.5	alternative 5' UTR
ENST00000322734.2	MANE_select
ENST00000412641.1	alternative 5' UTR
ENST00000383744.8	alternative 5' UTR
ENST00000344387.9	MANE_select
ENST00000344387.9	alternative 5' UTR
ENST00000396056.7	MANE_select
ENST00000432115.6	alternative 5' UTR
ENST00000415571.6	alternative 5' UTR
ENST00000399560.2	alternative 5' UTR
ENST00000453164.1	GENCODE experimental pipeline
ENST00000453164.1	alternative 5' UTR
ENST00000436624.7	MANE_select
ENST00000436624.7	alternative 5' UTR
ENST00000411443.1	alternative 5' UTR
ENST00000620116.5	MANE_select
ENST00000620116.5	alternative 5' UTR
ENST00000296121.6	MANE_select
ENST00000326047.9	MANE_select
ENST00000481166.6	QC splicing correct
ENST00000302392.5	MANE_select
ENST00000296125.9	MANE_select
ENST00000427258.1	GENCODE experimental pipeline
ENST00000424952.7	MANE_select
ENST00000342790.8	GENCODE experimental pipeline
ENST00000478669.1	GENCODE experimental pipeline
ENST00000477865.1	GENCODE experimental pipeline
ENST00000265564.8	MANE_select
ENST00000498168.1	GENCODE experimental pipeline
ENST00000459856.1	GENCODE experimental pipeline
ENST00000296130.5	MANE_select
ENST00000296129.6	MANE_select
ENST00000503771.2	MANE_select
ENST00000650792.2	alternative 5' UTR
ENST00000645846.2	LR annotation
ENST00000645846.2	MANE_select
ENST00000430399.1	alternative 5' UTR
ENST00000642274.1	alternative 5' UTR
ENST00000440097.5	GENCODE experimental pipeline
ENST00000273317.5	MANE_select
ENST00000658801.1	Assembled from SLRseq reads (SRP049776)
ENST00000655322.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000389061.10	MANE_select
ENST00000445499.2	NMD likely if extended
ENST00000358525.9	Isoform 1
ENST00000358525.9	MANE_select
ENST00000353278.8	Isoform 2
ENST00000413781.1	GENCODE experimental pipeline
ENST00000413781.1	QC splicing correct
ENST00000296135.11	MANE_select
ENST00000469874.5	QC splicing correct
ENST00000440576.2	QC splicing correct
ENST00000445698.1	GENCODE experimental pipeline
ENST00000648206.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000395963.2	Isoform B
ENST00000357632.7	Isoform A
ENST00000357632.7	MANE_select
ENST00000422395.1	GENCODE experimental pipeline
ENST00000296137.7	MANE_select
ENST00000438735.1	alternative 5' UTR
ENST00000304552.5	MANE_select
ENST00000458629.1	alternative 5' UTR
ENST00000457814.1	alternative 5' UTR
ENST00000309285.4	MANE_select
ENST00000395946.2	alternative 5' UTR
ENST00000452454.1	alternative 5' UTR
ENST00000395940.3	MANE_select
ENST00000395940.3	alternative 5' UTR
ENST00000457243.1	alternative 5' UTR
ENST00000395942.2	alternative 5' UTR
ENST00000296140.4	MANE_select
ENST00000465202.1	QC splicing correct
ENST00000445132.3	MANE_select
ENST00000421659.1	alternative 5' UTR
ENST00000445772.1	alternative 5' UTR
ENST00000399036.4	MANE_select
ENST00000400880.3	alternative 5' UTR
ENST00000433848.1	alternative 5' UTR
ENST00000400882.2	alternative 5' UTR
ENST00000441909.1	GENCODE experimental pipeline
ENST00000661642.1	Assembled from SLRseq reads (SRP049776)
ENST00000231751.9	MANE_select
ENST00000417439.5	GENCODE experimental pipeline
ENST00000443496.5	GENCODE experimental pipeline
ENST00000498301.1	GENCODE experimental pipeline
ENST00000296142.4	MANE_select
ENST00000395905.8	MANE_select
ENST00000296144.3	alternative 5' UTR
ENST00000496388.1	QC splicing correct
ENST00000296145.6	MANE_select
ENST00000505797.1	QC splicing correct
ENST00000640551.3	MANE_select
ENST00000640551.3	upstream ATG
ENST00000669501.1	Assembled from SLRseq reads (SRP049776)
ENST00000318962.9	MANE_select
ENST00000415953.5	alternative 5' UTR
ENST00000473484.1	NMD likely if extended
ENST00000643606.3	CAGE supported TSS
ENST00000643606.3	LR annotation
ENST00000643606.3	MANE_select
ENST00000315170.13	CAGE supported TSS
ENST00000315170.13	MANE_select
ENST00000447340.1	GENCODE experimental pipeline
ENST00000653454.1	alternative 3' UTR
ENST00000654597.1	alternative 3' UTR
ENST00000654597.1	alternative 5' UTR
ENST00000292327.6	LR annotation
ENST00000292327.6	MANE_select
ENST00000662933.1	alternative 5' UTR
ENST00000431168.1	alternative 5' UTR
ENST00000449590.6	MANE_select
ENST00000418619.5	QC splicing correct
ENST00000418619.5	alternative 5' UTR
ENST00000427125.6	alternative 5' UTR
ENST00000446836.5	alternative 5' UTR
ENST00000605875.1	alternative 5' UTR
ENST00000450053.8	MANE_select
ENST00000651747.1	CAGE supported TSS
ENST00000651747.1	LR annotation
ENST00000423436.1	GENCODE experimental pipeline
ENST00000409792.4	MANE_select
ENST00000670818.1	Assembled from SLRseq reads (SRP049776)
ENST00000452770.6	alternative 5' UTR
ENST00000456548.5	GENCODE experimental pipeline
ENST00000425853.5	alternative 5' UTR
ENST00000232766.6	MANE_select
ENST00000265562.5	MANE_select
ENST00000265565.10	MANE_select
ENST00000648151.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000416847.5	alternative 5' UTR
ENST00000495603.2	alternative 5' UTR
ENST00000420588.5	NMD likely if extended
ENST00000448217.2	alternative 5' UTR
ENST00000296149.9	MANE_select
ENST00000446787.5	GENCODE experimental pipeline
ENST00000414236.5	QC splicing correct
ENST00000264723.9	MANE_select
ENST00000254480.10	MANE_select
ENST00000445061.6	MANE_select
ENST00000348968.8	QC splicing correct
ENST00000420772.6	CAGE supported TSS
ENST00000420772.6	QC splicing correct
ENST00000423088.5	GENCODE experimental pipeline
ENST00000439356.2	alternative 5' UTR
ENST00000468075.2	alternative 5' UTR
ENST00000302506.8	MANE_select
ENST00000437972.1	alternative 5' UTR
ENST00000652295.2	MANE_select
ENST00000652295.2	upstream ATG
ENST00000427617.6	GENCODE experimental pipeline
ENST00000354698.8	MANE_select
ENST00000440261.6	GENCODE experimental pipeline
ENST00000442597.6	MANE_select
ENST00000452211.5	alternative 5' UTR
ENST00000444069.5	alternative 5' UTR
ENST00000456495.5	GENCODE experimental pipeline
ENST00000447724.1	GENCODE experimental pipeline
ENST00000296438.9	MANE_select
ENST00000296440.11	MANE_select
ENST00000358536.8	alternative 5' UTR
ENST00000412398.6	alternative 5' UTR
ENST00000395694.7	MANE_select
ENST00000442740.1	alternative 5' UTR
ENST00000446140.1	alternative 5' UTR
ENST00000438370.1	alternative 5' UTR
ENST00000438607.2	MANE_select
ENST00000635099.1	alternative 5' UTR
ENST00000320211.10	MANE_select
ENST00000433541.1	CAGE supported TSS
ENST00000433541.1	alternative 5' UTR
ENST00000444177.1	CAGE supported TSS
ENST00000625293.3	CAGE supported TSS
ENST00000625293.3	MANE_select
ENST00000625293.3	upstream uORF
ENST00000492235.2	CAGE supported TSS
ENST00000492235.2	alternative 5' UTR
ENST00000635452.2	CAGE supported TSS
ENST00000456089.1	CAGE supported TSS
ENST00000456089.1	alternative 5' UTR
ENST00000444115.5	alternative 5' UTR
ENST00000232375.8	MANE_select
ENST00000416568.5	GENCODE experimental pipeline
ENST00000452531.5	GENCODE experimental pipeline
ENST00000422701.1	GENCODE experimental pipeline
ENST00000273610.4	MANE_select
ENST00000328333.12	NP_000085
ENST00000681320.1	MANE_select
ENST00000681320.1	Updated to the cage peak & polyA site picked by the K algorithms. erb 18/8/20
ENST00000681320.1	alternative 5' UTR
ENST00000203407.6	MANE_select
ENST00000415995.5	Genoscope mRNA only
ENST00000330862.4	MANE_select
ENST00000395550.7	MANE_select
ENST00000455886.6	GENCODE experimental pipeline
ENST00000164024.5	MANE_select
ENST00000294129.7	MANE_select
ENST00000413374.1	GENCODE experimental pipeline
ENST00000328631.10	MANE_select
ENST00000413654.5	GENCODE experimental pipeline
ENST00000437427.5	alternative 5' UTR
ENST00000413298.5	alternative 5' UTR
ENST00000443964.1	GENCODE experimental pipeline
ENST00000265563.13	MANE_select
ENST00000296446.12	GENCODE experimental pipeline
ENST00000437821.2	GENCODE experimental pipeline
ENST00000437821.2	confirm experimentally
ENST00000438535.1	GENCODE experimental pipeline
ENST00000655796.1	Assembled from SLRseq reads (SRP049776)
ENST00000431705.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665061.1	Assembled from SLRseq reads (SRP049776)
ENST00000669166.1	Assembled from SLRseq reads (SRP049776)
ENST00000319017.5	MANE_select
ENST00000430379.5	GENCODE experimental pipeline
ENST00000449376.5	alternative 5' UTR
ENST00000356401.9	MANE_select
ENST00000383729.9	MANE_select
ENST00000429900.6	alternative 5' UTR
ENST00000488572.6	NMD likely if extended
ENST00000462064.5	NMD likely if extended
ENST00000489684.2	NMD likely if extended
ENST00000608424.6	CAGE supported TSS
ENST00000608424.6	MANE_select
ENST00000473238.6	NMD likely if extended
ENST00000438660.5	CAGE supported TSS
ENST00000415265.6	CAGE supported TSS
ENST00000415265.6	GENCODE experimental pipeline
ENST00000452875.5	CAGE supported TSS
ENST00000420783.7	CAGE supported TSS
ENST00000448293.5	alternative 5' UTR
ENST00000419837.1	alternative 5' UTR
ENST00000461687.1	NMD likely if extended
ENST00000341949.9	MANE_select
ENST00000440857.5	GENCODE experimental pipeline
ENST00000326925.11	MANE_select
ENST00000326739.9	MANE_select
ENST00000429182.6	GENCODE experimental pipeline
ENST00000442157.2	GENCODE experimental pipeline
ENST00000395443.7	MANE_select
ENST00000357496.6	alternative 5' UTR
ENST00000424300.5	alternative 5' UTR
ENST00000437939.5	alternative 5' UTR
ENST00000450685.5	GENCODE experimental pipeline
ENST00000450685.5	alternative 5' UTR
ENST00000411682.1	alternative 5' UTR
ENST00000430979.1	GENCODE experimental pipeline
ENST00000430979.1	alternative 5' UTR
ENST00000306125.12	MANE_select
ENST00000306125.12	upstream ATG
ENST00000636669.1	150885    150789
ENST00000464962.6	CAGE supported TSS
ENST00000635541.1	CAGE supported TSS
ENST00000635541.1	alternative 5' UTR
ENST00000470619.6	NMD likely if extended
ENST00000635501.1	NMD likely if extended
ENST00000452739.5	GENCODE experimental pipeline
ENST00000634527.1	alternative 5' UTR
ENST00000635052.1	alternative 3' UTR
ENST00000479495.5	NMD likely if extended
ENST00000418549.3	alternative 3' UTR
ENST00000417025.2	NMD likely if extended
ENST00000634425.1	NMD likely if extended
ENST00000635494.1	alternative 3' UTR
ENST00000479073.2	GENCODE experimental pipeline
ENST00000479073.2	QC splicing correct
ENST00000305544.9	MANE_select
ENST00000305544.9	alternative 5' UTR
ENST00000321895.7	MANE_select
ENST00000332780.4	MANE_select
ENST00000545770.7	MANE_select
ENST00000432035.2	not organism-supported
ENST00000296449.9	alternative 5' UTR
ENST00000452691.7	MANE_select
ENST00000452691.7	NP_835467.2
ENST00000493870.1	QC splicing correct
ENST00000343010.8	MANE_select
ENST00000265560.9	MANE_select
ENST00000431357.1	GENCODE experimental pipeline
ENST00000419783.3	MANE_select
ENST00000643797.1	NP_001316384
ENST00000646881.2	NP_001316432
ENST00000496791.2	NP_001316431
ENST00000678200.1	long_read_pipeline_2
ENST00000678921.2	align_id:3682290|asmbl_172455
ENST00000676712.2	compmerge.10745.pooled.chr3
ENST00000679208.1	long_read_pipeline_2
ENST00000418115.6	LR annotation
ENST00000418115.6	MANE_select
ENST00000677684.1	compmerge.10739.pooled.chr3
ENST00000677684.1	pacbio_capture_seq
ENST00000638079.1	alternative 3' UTR
ENST00000638014.1	alternative 3' UTR
ENST00000636461.1	alternative 3' UTR
ENST00000273588.9	MANE_select
ENST00000395338.7	GENCODE experimental pipeline
ENST00000637268.1	QC splicing correct
ENST00000636522.1	GENCODE experimental pipeline
ENST00000637821.1	alternative 3' UTR
ENST00000487589.6	NMD likely if extended
ENST00000430521.2	alternative 3' UTR
ENST00000273598.8	MANE_select
ENST00000469139.1	alternative 5' UTR
ENST00000421560.5	alternative 5' UTR
ENST00000418588.5	alternative 5' UTR
ENST00000431960.5	alternative 5' UTR
ENST00000308775.7	LR annotation
ENST00000308775.7	MANE_select
ENST00000452317.5	alternative 5' UTR
ENST00000435508.7	alternative 5' UTR
ENST00000452060.6	alternative 5' UTR
ENST00000673708.1	alternative 5' UTR
ENST00000428779.6	alternative 5' UTR
ENST00000430636.1	alternative 5' UTR
ENST00000665395.1	Assembled from SLRseq reads (SRP049776)
ENST00000296452.5	MANE_select
ENST00000296452.5	NMD exception
ENST00000296456.10	MANE_select
ENST00000481930.6	QC splicing correct
ENST00000491943.1	GENCODE experimental pipeline
ENST00000454491.5	alternative 5' UTR
ENST00000327697.11	MANE_select
ENST00000320431.8	MANE_select
ENST00000308388.7	MANE_select
ENST00000308388.7	alternative 5' UTR
ENST00000495627.2	prediction only
ENST00000321599.9	MANE_select
ENST00000468463.5	GENCODE experimental pipeline
ENST00000412678.7	MANE_select
ENST00000333323.6	MANE_select
ENST00000333323.6	upstream ATG
ENST00000333486.4	MANE_select
ENST00000494212.1	Em:CK430594.1
ENST00000331456.7	MANE_select
ENST00000477224.6	MANE_select
ENST00000463537.5	GENCODE experimental pipeline
ENST00000296474.8	Isoform 1
ENST00000296474.8	MANE_select
ENST00000344206.8	Isoform 2
ENST00000434765.5	GENCODE experimental pipeline
ENST00000412015.1	GENCODE experimental pipeline
ENST00000642691.1	alternative 5' UTR
ENST00000642691.1	upstream uORF
ENST00000417270.1	GENCODE experimental pipeline
ENST00000266022.9	MANE_select
ENST00000433811.1	alternative 5' UTR
ENST00000491874.5	alternative 5' UTR
ENST00000488807.2	GENCODE experimental pipeline
ENST00000446471.1	GENCODE experimental pipeline
ENST00000421682.1	GENCODE experimental pipeline
ENST00000347869.8	MANE_select
ENST00000441305.5	alternative 5' UTR
ENST00000437500.5	alternative 5' UTR
ENST00000417905.1	alternative 5' UTR
ENST00000474470.1	GENCODE experimental pipeline
ENST00000414301.5	alternative 5' UTR
ENST00000450338.5	alternative 5' UTR
ENST00000002829.8	MANE_select
ENST00000426511.5	alternative 5' UTR
ENST00000434342.5	alternative 5' UTR
ENST00000420831.1	not organism-supported
ENST00000232461.8	MANE_select
ENST00000610458.4	alternative 5' UTR
ENST00000614032.5	MANE_select
ENST00000620404.1	sequence error
ENST00000621456.2	alternative 5' UTR
ENST00000491100.5	upORF is conserved back to horse, however, made as a transcript otherwise it would be NMD
ENST00000480090.1	GENCODE experimental pipeline
ENST00000313601.11	MANE_select
ENST00000440628.5	upORF not conserved and would induce NMD, so made putative CDS
ENST00000439898.1	CAGE supported TSS
ENST00000453717.1	CAGE supported TSS
ENST00000453717.1	GENCODE experimental pipeline
ENST00000426302.1	GENCODE experimental pipeline
ENST00000421735.1	GENCODE experimental pipeline
ENST00000621029.4	alternative 5' UTR
ENST00000616701.5	MANE_select
ENST00000456560.6	alternative 5' UTR
ENST00000418576.3	NP_001276991.1
ENST00000316436.4	MANE_select
ENST00000436390.5	alternative 5' UTR
ENST00000621157.5	alternative 5' UTR
ENST00000336307.6	MANE_select
ENST00000443094.3	MANE_select
ENST00000417393.1	alternative 5' UTR
ENST00000443842.1	alternative 5' UTR
ENST00000450489.1	alternative 5' UTR
ENST00000442620.5	alternative 5' UTR
ENST00000452674.1	QC splicing correct
ENST00000452674.1	alternative 5' UTR
ENST00000266031.8	alternative 5' UTR
ENST00000395144.7	Isoform 1
ENST00000395144.7	MANE_select
ENST00000320295.12	alternative 5' UTR
ENST00000395143.6	Isoform 2
ENST00000457214.6	Isoform3
ENST00000447605.2	Isoform 5
ENST00000418723.1	alternative 5' UTR
ENST00000452672.1	alternative 5' UTR
ENST00000447092.5	alternative 5' UTR
ENST00000357750.9	MANE_select
ENST00000395139.7	alternative 5' UTR
ENST00000442581.1	alternative 5' UTR
ENST00000458018.1	alternative 5' UTR
ENST00000426286.1	alternative 5' UTR
ENST00000428028.1	alternative 5' UTR
ENST00000415028.1	alternative 5' UTR
ENST00000490675.5	QC splicing correct
ENST00000231749.8	Isoform 1
ENST00000231749.8	MANE_select
ENST00000360165.7	Isoform 2
ENST00000232501.8	MANE_select
ENST00000424512.5	Genoscope mRNA only
ENST00000424512.5	alternative 5' UTR
ENST00000418577.1	alternative 5' UTR
ENST00000425346.6	MANE_select
ENST00000425346.6	alternative 5' UTR
ENST00000490926.1	GENCODE experimental pipeline
ENST00000266025.4	MANE_select
ENST00000266025.4	PL6 protein (deleted in Small Cell Lung Carcinoma)
ENST00000424201.7	MANE_select
ENST00000423994.6	non canonical conserved
ENST00000266039.7	non canonical conserved
ENST00000360963.7	non canonical conserved
ENST00000357203.8	MANE_select
ENST00000430746.5	QC splicing correct
ENST00000422619.1	GENCODE experimental pipeline
ENST00000455834.5	alternative 5' UTR
ENST00000232854.9	MANE_select
ENST00000232854.9	alternative 5' UTR
ENST00000348721.4	MANE_select
ENST00000446044.5	alternative 5' UTR
ENST00000430409.5	alternative 5' UTR
ENST00000621469.5	MANE_select
ENST00000621469.5	genebuild_only_MANE
ENST00000457064.1	alternative 5' UTR
ENST00000451680.1	GENCODE experimental pipeline
ENST00000266037.10	MANE_select
ENST00000528157.7	MANE_select
ENST00000528157.7	NP_006001
ENST00000528157.7	upstream ATG
ENST00000649711.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000563281.2	MANE_select
ENST00000432863.1	GENCODE experimental pipeline
ENST00000419358.5	alternative 5' UTR
ENST00000412249.5	alternative 5' UTR
ENST00000425781.5	alternative 5' UTR
ENST00000341333.10	MANE_select
ENST00000415259.5	alternative 5' UTR
ENST00000395057.5	alternative 5' UTR
ENST00000416589.5	alternative 5' UTR
ENST00000457927.5	alternative 5' UTR
ENST00000444233.1	alternative 5' UTR
ENST00000666727.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000395052.8	MANE_select
ENST00000419928.1	alternative 5' UTR
ENST00000442933.2	GENCODE experimental pipeline
ENST00000442933.2	QC splicing correct
ENST00000667863.2	CAGE supported TSS
ENST00000667863.2	MANE_select
ENST00000650142.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000446775.5	alternative 5' UTR
ENST00000462079.1	QC splicing correct
ENST00000333127.4	MANE_select
ENST00000446461.2	MANE_select
ENST00000310914.10	MANE_select
ENST00000667061.1	Assembled from SLRseq reads (SRP049776)
ENST00000669235.1	Assembled from SLRseq reads (SRP049776)
ENST00000232888.7	MANE_select
ENST00000431474.6	upstream ATG
ENST00000417220.6	alternative 5' UTR
ENST00000398755.8	MANE_select
ENST00000398755.8	upstream ATG
ENST00000471971.6	alternative 5' UTR
ENST00000498510.2	CAGE supported TSS
ENST00000498510.2	alternative 5' UTR
ENST00000322241.6	MANE_select
ENST00000461554.6	MANE_select
ENST00000461554.6	alternative 5' UTR
ENST00000471622.5	GENCODE experimental pipeline
ENST00000468324.5	alternative 5' UTR
ENST00000466412.5	alternative 5' UTR
ENST00000497653.5	alternative 5' UTR
ENST00000489595.6	alternative 5' UTR
ENST00000490063.5	alternative 5' UTR
ENST00000483411.5	alternative 5' UTR
ENST00000461544.2	alternative 5' UTR
ENST00000488257.2	NMD likely if extended
ENST00000483233.5	alternative 5' UTR
ENST00000361143.10	MANE_select
ENST00000361143.10	alternative 5' UTR
ENST00000525795.1	alternative 5' UTR
ENST00000497864.5	GENCODE experimental pipeline
ENST00000494478.5	GENCODE experimental pipeline
ENST00000273596.8	MANE_select
ENST00000491470.1	GENCODE experimental pipeline
ENST00000463721.5	alternative 3' UTR
ENST00000637778.1	alternative 3' UTR
ENST00000636646.1	alternative 3' UTR
ENST00000463937.1	not organism-supported
ENST00000636942.1	alternative 3' UTR
ENST00000636089.1	alternative 3' UTR
ENST00000637696.1	alternative 3' UTR
ENST00000637563.1	alternative 3' UTR
ENST00000635937.1	alternative 3' UTR
ENST00000635946.1	alternative 3' UTR
ENST00000635951.1	alternative 3' UTR
ENST00000636826.1	alternative 3' UTR
ENST00000636718.1	alternative 3' UTR
ENST00000637222.1	alternative 5' UTR
ENST00000636490.1	alternative 3' UTR
ENST00000637730.1	alternative 3' UTR
ENST00000635785.1	alternative 3' UTR
ENST00000637512.1	alternative 3' UTR
ENST00000637461.1	alternative 3' UTR
ENST00000404366.7	alternative 5' UTR
ENST00000636358.2	MANE_select
ENST00000469863.1	GENCODE experimental pipeline
ENST00000636047.1	NMD likely if extended
ENST00000648640.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000294189.11	MANE_select
ENST00000466397.5	alternative 5' UTR
ENST00000479017.5	alternative 5' UTR
ENST00000495383.5	alternative 5' UTR
ENST00000475248.5	alternative 5' UTR
ENST00000492277.5	alternative 5' UTR
ENST00000648932.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000495880.2	MANE_select
ENST00000296484.7	MANE_select
ENST00000662194.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000484952.6	MANE_select
ENST00000493402.1	GENCODE experimental pipeline
ENST00000360658.3	MANE_select
ENST00000494383.1	GENCODE experimental pipeline
ENST00000305533.10	MANE_select
ENST00000679296.1	CAGE supported TSS
ENST00000499914.2	GENCODE experimental pipeline
ENST00000499914.2	Genoscope mRNA only
ENST00000323588.9	MANE_select
ENST00000323588.9	genebuild_only_MANE
ENST00000443681.1	GENCODE experimental pipeline
ENST00000296490.8	MANE_select
ENST00000296490.8	NP_079498
ENST00000461183.5	GENCODE experimental pipeline
ENST00000436784.7	MANE_select
ENST00000472761.1	not organism-supported
ENST00000466628.1	QC splicing correct
ENST00000460680.6	MANE_select
ENST00000327906.8	MANE_select
ENST00000461861.5	GENCODE experimental pipeline
ENST00000231721.7	MANE_select
ENST00000232975.8	MANE_select
ENST00000496590.1	GENCODE experimental pipeline
ENST00000345716.9	MANE_select
ENST00000345716.9	genebuild_only_MANE
ENST00000321725.10	MANE_select
ENST00000422318.7	MANE_select
ENST00000477703.6	LOC440957
ENST00000477703.6	MANE_select
ENST00000446103.5	FLJ31979
ENST00000431678.5	alternative 5' UTR
ENST00000420148.5	alternative 5' UTR
ENST00000450271.5	alternative 5' UTR
ENST00000439181.5	alternative 5' UTR
ENST00000439181.5	upstream ATG
ENST00000458294.5	alternative 5' UTR
ENST00000424867.1	alternative 5' UTR
ENST00000424867.1	upstream ATG
ENST00000468146.5	QC splicing correct
ENST00000418458.6	MANE_select
ENST00000266014.11	MANE_select
ENST00000266014.11	alternative 5' UTR
ENST00000394783.7	alternative 5' UTR
ENST00000491606.5	Genoscope mRNA only
ENST00000491606.5	alternative 5' UTR
ENST00000479553.5	alternative 5' UTR
ENST00000497436.5	alternative 5' UTR
ENST00000497953.5	alternative 5' UTR
ENST00000487642.5	alternative 5' UTR
ENST00000464705.1	alternative 5' UTR
ENST00000619898.5	MANE_select
ENST00000619898.5	NP_054760.4
ENST00000619898.5	upstream ATG
ENST00000233027.10	MANE_select
ENST00000383721.8	GENCODE experimental pipeline
ENST00000461689.5	GENCODE experimental pipeline
ENST00000273283.7	MANE_select
ENST00000428133.5	Genoscope mRNA only
ENST00000266041.9	MANE_select
ENST00000513520.1	NMD likely if extended
ENST00000486659.5	GENCODE experimental pipeline
ENST00000446157.3	MANE_select
ENST00000355083.11	MANE_select
ENST00000485356.1	GENCODE experimental pipeline
ENST00000394752.8	MANE_select
ENST00000296292.8	MANE_select
ENST00000394738.7	GENCODE experimental pipeline
ENST00000478843.5	alternative 5' UTR
ENST00000330452.8	CAGE supported TSS
ENST00000330452.8	LR annotation
ENST00000330452.8	MANE_select
ENST00000330452.8	alternative 5' UTR
ENST00000477794.2	QC splicing correct
ENST00000477794.2	alternative 5' UTR
ENST00000650739.1	alternative 5' UTR
ENST00000487897.5	alternative 5' UTR
ENST00000464818.1	QC splicing correct
ENST00000650940.1	alternative 5' UTR
ENST00000650940.1	upstream ATG
ENST00000667372.1	Assembled from RACEseq reads
ENST00000462138.6	MANE_select
ENST00000610213.6	MANE_select
ENST00000294241.10	NP_001277133.1
ENST00000288139.11	CAGE supported TSS
ENST00000288139.11	LR annotation
ENST00000350061.11	CAGE supported TSS
ENST00000350061.11	MANE_select
ENST00000481085.5	GENCODE experimental pipeline
ENST00000637714.1	NAGNAG splice site
ENST00000638120.1	CAGE supported TSS
ENST00000638120.1	upstream ATG
ENST00000315251.11	MANE_select
ENST00000481668.5	alternative 5' UTR
ENST00000467802.1	alternative 5' UTR
ENST00000288167.8	MANE_select
ENST00000494338.1	GENCODE experimental pipeline
ENST00000335754.8	MANE_select
ENST00000482349.5	GENCODE experimental pipeline
ENST00000498740.1	GENCODE experimental pipeline
ENST00000495461.6	MANE_select
ENST00000655075.1	Assembled from RACEseq reads
ENST00000666932.1	Assembled from SLRseq reads (SRP049776)
ENST00000474759.6	MANE_select
ENST00000273286.6	MANE_select
ENST00000654581.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662390.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670191.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000264634.9	CAGE supported TSS
ENST00000264634.9	MANE_select
ENST00000264634.9	alternative 5' UTR
ENST00000482079.1	alternative 5' UTR
ENST00000288221.11	MANE_select
ENST00000288221.11	QC splicing correct
ENST00000460849.5	QC splicing correct
ENST00000422222.5	QC splicing correct
ENST00000394672.8	MANE_select
ENST00000394672.8	There is a deletion in the refrence genome that resullts in a missing S at 607 from this translation relative to the SwissProt entry. This sequence is therefore 948aa rather than the 949 in the SwissProt entry SW:A2RUB6.3
ENST00000472582.5	NMD likely if extended
ENST00000296315.8	MANE_select
ENST00000497267.5	GENCODE experimental pipeline
ENST00000473779.5	GENCODE experimental pipeline
ENST00000334325.2	MANE_select
ENST00000296318.12	MANE_select
ENST00000463523.5	alternative 5' UTR
ENST00000467210.5	alternative 5' UTR
ENST00000295934.8	MANE_select
ENST00000647958.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000473921.2	GENCODE experimental pipeline
ENST00000495160.2	alternative 5' UTR
ENST00000650354.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000288266.8	MANE_select
ENST00000495803.5	QC splicing correct
ENST00000487349.6	MANE_select
ENST00000487349.6	non canonical conserved
ENST00000656348.1	Assembled from SLRseq reads (SRP049776)
ENST00000495027.5	GENCODE experimental pipeline
ENST00000389536.8	QC splicing correct
ENST00000668911.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000311180.9	MANE_select
ENST00000303436.11	MANE_select
ENST00000496292.5	GENCODE experimental pipeline
ENST00000496292.5	Genoscope mRNA only
ENST00000483848.5	NMD likely if extended
ENST00000463880.1	alternative 5' UTR
ENST00000493378.1	NMD likely if extended
ENST00000495354.1	GENCODE experimental pipeline
ENST00000488156.1	alternative 5' UTR
ENST00000658756.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000311128.10	MANE_select
ENST00000470427.1	GENCODE experimental pipeline
ENST00000295951.7	Extended at 5' end with rabbit cDNA, whihc gives an N-terminal extension of 121 amnio acids
ENST00000659705.1	CAGE supported TSS
ENST00000659705.1	LR annotation
ENST00000671191.1	CAGE supported TSS
ENST00000671191.1	LR annotation
ENST00000671191.1	MANE_select
ENST00000461354.5	alternative 5' UTR
ENST00000466255.1	alternative 5' UTR
ENST00000490882.5	GENCODE experimental pipeline
ENST00000295956.9	MANE_select
ENST00000486455.5	GENCODE experimental pipeline
ENST00000394549.7	MANE_select
ENST00000483681.5	GENCODE experimental pipeline
ENST00000477209.5	GENCODE experimental pipeline
ENST00000461914.7	alternative 5' UTR
ENST00000460422.1	alternative 5' UTR
ENST00000295962.8	alternative 5' UTR
ENST00000478253.6	MANE_select
ENST00000485900.1	alternative 5' UTR
ENST00000295959.10	MANE_select
ENST00000461797.5	NMD likely if extended
ENST00000445193.7	alternative 5' UTR
ENST00000466547.1	alternative 5' UTR
ENST00000477305.5	Genoscope mRNA only
ENST00000461393.7	MANE_select
ENST00000356151.7	MANE_select
ENST00000479134.5	GENCODE experimental pipeline
ENST00000302746.11	MANE_select
ENST00000404589.8	MANE_select
ENST00000404589.8	alternative 5' UTR
ENST00000490264.1	Genoscope mRNA only
ENST00000490264.1	alternative 5' UTR
ENST00000491093.5	QC splicing correct
ENST00000479179.1	alternative 5' UTR
ENST00000479470.1	GENCODE experimental pipeline
ENST00000302819.10	MANE_select
ENST00000459701.6	GENCODE experimental pipeline
ENST00000474098.1	alternative 5' UTR
ENST00000475143.5	QC splicing correct
ENST00000360997.7	MANE_select
ENST00000394481.5	alternative 5' UTR
ENST00000649301.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000447756.2	CAGE supported TSS
ENST00000465970.1	alternative 5' UTR
ENST00000497310.1	GENCODE experimental pipeline
ENST00000649469.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000358781.7	MANE_select
ENST00000498347.1	alternative 5' UTR
ENST00000472469.5	GENCODE experimental pipeline
ENST00000478363.1	not organism-supported
ENST00000492031.6	Assembled from SLRseq reads (SRP049776)
ENST00000666146.1	Assembled from SLRseq reads (SRP049776)
ENST00000662588.1	Assembled from SLRseq reads (SRP049776)
ENST00000463703.6	Assembled from SLRseq reads (SRP049776)
ENST00000659086.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664511.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668131.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660278.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668989.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665883.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670321.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663318.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661035.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000492590.6	MANE_select
ENST00000655190.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000474889.6	MANE_select
ENST00000661510.1	Assembled from SLRseq reads (SRP049776)
ENST00000665590.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665590.1	Assembled from SLRseq reads (SRP049776)
ENST00000664200.1	Assembled from SLRseq reads (SRP049776)
ENST00000662235.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652936.1	Assembled from SLRseq reads (SRP049776)
ENST00000668824.1	Assembled from SLRseq reads (SRP049776)
ENST00000665832.1	Assembled from SLRseq reads (SRP049776)
ENST00000670263.1	Assembled from SLRseq reads (SRP049776)
ENST00000664757.1	Assembled from SLRseq reads (SRP049776)
ENST00000664758.1	Assembled from SLRseq reads (SRP049776)
ENST00000653279.1	Assembled from SLRseq reads (SRP049776)
ENST00000652980.1	Assembled from SLRseq reads (SRP049776)
ENST00000660182.1	Assembled from SLRseq reads (SRP049776)
ENST00000669426.1	Assembled from SLRseq reads (SRP049776)
ENST00000669571.1	Assembled from SLRseq reads (SRP049776)
ENST00000670193.1	Assembled from SLRseq reads (SRP049776)
ENST00000232519.9	alternative 5' UTR
ENST00000462069.6	MANE_select
ENST00000462069.6	alternative 5' UTR
ENST00000465142.5	alternative 5' UTR
ENST00000283268.8	MANE_select
ENST00000486811.5	alternative 5' UTR
ENST00000475839.1	alternative 5' UTR
ENST00000383710.9	MANE_select
ENST00000491424.5	QC splicing correct
ENST00000468271.5	GENCODE experimental pipeline
ENST00000490353.2	confirm experimentally
ENST00000475886.5	QC splicing correct
ENST00000465262.5	QC splicing correct
ENST00000478300.6	MANE_select
ENST00000472899.5	NMD likely if extended
ENST00000479198.5	GENCODE experimental pipeline
ENST00000465156.1	QC splicing correct
ENST00000343837.8	MANE_select
ENST00000496807.1	GENCODE experimental pipeline
ENST00000295896.13	MANE_select
ENST00000295899.10	MANE_select
ENST00000473141.5	QC splicing correct
ENST00000464327.2	alternative 5' UTR
ENST00000468961.2	GENCODE experimental pipeline
ENST00000674280.1	CAGE supported TSS
ENST00000674280.1	MANE_select
ENST00000474513.6	alternative 5' UTR
ENST00000295900.10	alternative 5' UTR
ENST00000650280.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000487717.5	QC splicing correct
ENST00000487717.5	alternative 5' UTR
ENST00000488239.1	QC splicing correct
ENST00000295901.9	MANE_select
ENST00000462717.1	GENCODE experimental pipeline
ENST00000638394.2	MANE_select
ENST00000564377.6	alternative 5' UTR
ENST00000476308.1	GENCODE experimental pipeline
ENST00000484703.1	GENCODE experimental pipeline
ENST00000659263.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000498707.5	MANE_select
ENST00000481060.2	alternative 3' UTR
ENST00000594810.3	Assembled from RACEseq reads
ENST00000647631.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000647631.2	Assembled from SLRseq reads (SRP049776)
ENST00000650103.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000667847.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657584.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000481004.1	Genoscope mRNA only
ENST00000463103.6	QC splicing correct
ENST00000460329.6	QC splicing correct
ENST00000676754.1	alternative 5' UTR
ENST00000354883.11	CAGE supported TSS
ENST00000354883.11	MANE_select
ENST00000273261.8	MANE_select
ENST00000661256.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648920.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000665588.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000469661.1	GENCODE experimental pipeline
ENST00000469661.1	QC splicing correct
ENST00000417314.2	MANE_select
ENST00000307227.10	MANE_select
ENST00000665078.1	Assembled from SLRseq reads (SRP049776)
ENST00000464420.6	Assembled from SLRseq reads (SRP049776)
ENST00000659899.1	Assembled from SLRseq reads (SRP049776)
ENST00000659205.1	Assembled from SLRseq reads (SRP049776)
ENST00000671174.1	Assembled from SLRseq reads (SRP049776)
ENST00000659329.1	Assembled from SLRseq reads (SRP049776)
ENST00000662687.1	Assembled from SLRseq reads (SRP049776)
ENST00000658269.1	Assembled from SLRseq reads (SRP049776)
ENST00000656446.1	Assembled from SLRseq reads (SRP049776)
ENST00000650236.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000478136.6	MANE_select
ENST00000496687.1	alternative 5' UTR
ENST00000658216.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000295569.12	MANE_select
ENST00000495737.1	alternative 5' UTR
ENST00000383701.8	MANE_select
ENST00000424374.5	alternative 5' UTR
ENST00000456376.2	alternative 5' UTR
ENST00000610844.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000398559.7	MANE_select
ENST00000488010.5	QC splicing correct
ENST00000361055.9	MANE_select
ENST00000349511.8	NP_937838.1
ENST00000273258.4	MANE_select
ENST00000420581.7	MANE_select
ENST00000489031.5	alternative 5' UTR
ENST00000475434.1	alternative 5' UTR
ENST00000398540.8	MANE_select
ENST00000489817.1	alternative 5' UTR
ENST00000473029.5	alternative 5' UTR
ENST00000460709.5	alternative 5' UTR
ENST00000459638.5	alternative 5' UTR
ENST00000497757.1	QC splicing correct
ENST00000465347.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000352241.9	CAGE supported TSS
ENST00000352241.9	MANE_select
ENST00000642352.1	CAGE supported TSS
ENST00000642352.1	LR annotation
ENST00000314589.10	CAGE supported TSS
ENST00000314589.10	LR annotation
ENST00000394351.9	CAGE supported TSS
ENST00000394351.9	LR annotation
ENST00000478490.5	QC splicing correct
ENST00000394348.2	GENCODE experimental pipeline
ENST00000641929.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000488861.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671630.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000567252.2	MANE_select
ENST00000661265.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649528.3	MANE_select
ENST00000649528.3	alternative 5' UTR
ENST00000475937.5	alternative 5' UTR
ENST00000493089.7	NAGNAG splice site
ENST00000649596.1	alternative 5' UTR
ENST00000649431.1	NAGNAG splice site
ENST00000614176.5	CAGE supported TSS
ENST00000614176.5	NAGNAG splice site
ENST00000614176.5	NP_001336272.1
ENST00000497355.7	upstream ATG
ENST00000648426.1	NP_001231739.1
ENST00000648426.1	confirm experimentally
ENST00000649610.1	NAGNAG splice site
ENST00000649695.2	NP_001231744.1
ENST00000649695.2	upstream ATG
ENST00000647741.1	NAGNAG splice site
ENST00000648748.2	NAGNAG splice site
ENST00000648748.2	upstream ATG
ENST00000498215.6	alternative 5' UTR
ENST00000650387.1	CAGE supported TSS
ENST00000650387.1	NP_001231742.1
ENST00000650387.1	alternative 5' UTR
ENST00000648710.1	NAGNAG splice site
ENST00000648710.1	NP_001336270.1
ENST00000491238.7	NAGNAG splice site
ENST00000491238.7	upstream ATG
ENST00000649631.1	alternative 5' UTR
ENST00000648718.1	NAGNAG splice site
ENST00000648718.1	alternative 5' UTR
ENST00000648384.1	NAGNAG splice site
ENST00000650188.1	CAGE supported TSS
ENST00000650188.1	NAGNAG splice site
ENST00000648380.1	alternative 5' UTR
ENST00000649592.1	CAGE supported TSS
ENST00000468577.6	NAGNAG splice site
ENST00000648794.1	CAGE supported TSS
ENST00000648794.1	NAGNAG splice site
ENST00000648794.1	alternative 5' UTR
ENST00000650068.1	alternative 5' UTR
ENST00000644199.1	NAGNAG splice site
ENST00000647829.1	NAGNAG splice site
ENST00000648121.1	alternative 5' UTR
ENST00000647614.1	NAGNAG splice site
ENST00000647614.1	alternative 5' UTR
ENST00000497553.3	alternative 5' UTR
ENST00000647776.1	CAGE supported TSS
ENST00000649760.1	NAGNAG splice site
ENST00000610810.5	alternative 5' UTR
ENST00000650295.1	alternative 5' UTR
ENST00000648895.1	alternative 5' UTR
ENST00000622151.4	alternative 5' UTR
ENST00000648662.1	alternative 5' UTR
ENST00000648107.1	alternative 5' UTR
ENST00000648944.1	alternative 5' UTR
ENST00000648783.1	alternative 5' UTR
ENST00000471386.3	alternative 5' UTR
ENST00000650156.1	alternative 5' UTR
ENST00000647725.1	alternative 5' UTR
ENST00000650123.1	NAGNAG splice site
ENST00000425534.8	MANE_select
ENST00000304411.3	MANE_select
ENST00000295619.4	MANE_select
ENST00000658676.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666244.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661666.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664410.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668168.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608654.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665453.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671527.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660632.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000469218.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000626474.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000498432.6	Assembled from SLRseq reads (SRP049776)
ENST00000662591.1	Assembled from SLRseq reads (SRP049776)
ENST00000656335.1	Assembled from SLRseq reads (SRP049776)
ENST00000470712.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668763.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000488545.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664517.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658297.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000610188.1	nested 454 RNA-Seq supported
ENST00000473713.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000650568.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000650568.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000485404.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661020.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664354.1	Assembled from SLRseq reads (SRP049776)
ENST00000491567.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671101.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000477973.4	sequence error
ENST00000478745.1	GENCODE experimental pipeline
ENST00000659534.1	Assembled from SLRseq reads (SRP049776)
ENST00000325599.13	MANE_select
ENST00000389617.9	MANE_select
ENST00000356692.10	MANE_select
ENST00000476505.2	QC splicing correct
ENST00000533473.1	MANE_select
ENST00000263666.9	MANE_select
ENST00000494559.5	GENCODE experimental pipeline
ENST00000494559.5	QC splicing correct
ENST00000462146.6	alternative 5' UTR
ENST00000479530.5	GENCODE experimental pipeline
ENST00000659853.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670514.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664767.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666034.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000641331.1	ENA ID EGAS00001001486
ENST00000641370.1	ENA ID EGAS00001001486
ENST00000641370.1	alternative 5' UTR
ENST00000669491.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665635.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666032.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658414.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660604.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658684.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656378.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654411.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653360.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657034.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658264.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653346.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662055.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659468.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669403.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662833.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670995.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663384.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667045.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661244.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659018.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669740.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654265.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000608707.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000608169.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656497.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667743.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658641.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658641.1	Assembled from SLRseq reads (SRP049776)
ENST00000658657.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656118.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664023.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665161.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666979.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652894.1	Assembled from SLRseq reads (SRP049776)
ENST00000660619.1	Assembled from SLRseq reads (SRP049776)
ENST00000654726.1	Assembled from SLRseq reads (SRP049776)
ENST00000308062.7	NAGNAG splice site
ENST00000308062.7	not best-in-genome evidence
ENST00000464571.1	NAGNAG splice site
ENST00000464571.1	not best-in-genome evidence
ENST00000668145.1	Assembled from SLRseq reads (SRP049776)
ENST00000657028.1	Assembled from SLRseq reads (SRP049776)
ENST00000463183.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669013.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656252.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665741.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662338.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666754.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648506.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000652011.2	MANE_select
ENST00000471541.2	alternative 5' UTR
ENST00000332191.12	GENCODE experimental pipeline
ENST00000471893.1	GENCODE experimental pipeline
ENST00000490534.1	GENCODE experimental pipeline
ENST00000666024.1	Assembled from SLRseq reads (SRP049776)
ENST00000461186.1	GENCODE experimental pipeline
ENST00000461528.5	QC splicing correct
ENST00000496674.1	GENCODE experimental pipeline
ENST00000464233.6	MANE_select
ENST00000495273.5	NP_001139316
ENST00000467549.5	NP_001139317
ENST00000472273.1	GENCODE experimental pipeline
ENST00000660849.1	Assembled from SLRseq reads (SRP049776)
ENST00000665198.1	Assembled from SLRseq reads (SRP049776)
ENST00000656673.1	Assembled from SLRseq reads (SRP049776)
ENST00000660085.1	Assembled from SLRseq reads (SRP049776)
ENST00000668251.1	Assembled from SLRseq reads (SRP049776)
ENST00000667434.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658456.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654848.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654830.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662919.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653347.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000482617.1	QC splicing correct
ENST00000666975.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666491.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000478239.5	GENCODE experimental pipeline
ENST00000657713.1	Assembled from SLRseq reads (SRP049776)
ENST00000429644.7	MANE_select
ENST00000497946.1	GENCODE experimental pipeline
ENST00000671096.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654999.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664839.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655168.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666498.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670278.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655956.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657414.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000494340.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668833.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666519.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654980.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653255.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666096.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000670186.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655435.1	Assembled from SLRseq reads (SRP049776)
ENST00000655014.1	Assembled from SLRseq reads (SRP049776)
ENST00000663801.1	Assembled from SLRseq reads (SRP049776)
ENST00000653196.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658763.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661490.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653986.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654507.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652873.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661831.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666897.1	Assembled from RACEseq reads
ENST00000383699.8	MANE_select
ENST00000467225.1	GENCODE experimental pipeline
ENST00000667284.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671319.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000398399.7	MANE_select
ENST00000630120.2	Assembled from SLRseq reads (SRP049776)
ENST00000656042.1	Assembled from SLRseq reads (SRP049776)
ENST00000471660.5	GENCODE experimental pipeline
ENST00000494980.5	GENCODE experimental pipeline
ENST00000263780.9	MANE_select
ENST00000350375.7	MANE_select
ENST00000344265.7	NP_001116229.1
ENST00000344265.7	QC splicing correct
ENST00000560656.1	QC splicing correct
ENST00000462792.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000655850.1	Assembled from SLRseq reads (SRP049776)
ENST00000667503.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000319595.7	MANE_select
ENST00000482016.6	MANE_select
ENST00000482016.6	alternative 5' UTR
ENST00000398392.2	alternative 5' UTR
ENST00000462901.5	alternative 5' UTR
ENST00000467332.1	alternative 5' UTR
ENST00000636215.2	MANE_select
ENST00000318887.8	MANE_select
ENST00000486971.1	GENCODE experimental pipeline
ENST00000637986.2	MANE_select
ENST00000336596.7	MANE_select
ENST00000650616.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000650616.2	Assembled from SLRseq reads (SRP049776)
ENST00000394236.9	MANE_select
ENST00000650591.1	GENCODE experimental pipeline
ENST00000650591.1	NP_001301006.1
ENST00000348974.5	alternative 3' UTR
ENST00000478400.3	NMD likely if extended
ENST00000680414.1	alternative 3' UTR
ENST00000679601.1	alternative 3' UTR
ENST00000394222.8	MANE_select
ENST00000394222.8	alternative 3' UTR
ENST00000315099.3	MANE_select
ENST00000314636.3	MANE_select
ENST00000314636.3	alternative 5' UTR
ENST00000496983.1	alternative 5' UTR
ENST00000314622.9	MANE_select
ENST00000665896.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000462219.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652877.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668707.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000463200.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663893.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662343.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655736.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670450.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655052.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660591.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656651.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658118.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660677.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651942.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000664338.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655395.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665306.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657041.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655186.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655431.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661499.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000466560.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664608.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671623.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656113.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665152.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668435.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668600.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660887.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654564.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666801.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655102.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652962.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665609.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665486.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662488.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000600213.3	not best-in-genome evidence
ENST00000662485.1	Assembled from SLRseq reads (SRP049776)
ENST00000657027.1	Assembled from SLRseq reads (SRP049776)
ENST00000671120.1	Assembled from SLRseq reads (SRP049776)
ENST00000514100.5	GENCODE experimental pipeline
ENST00000462412.2	alternative 5' UTR
ENST00000463745.6	MANE_select
ENST00000476753.1	GENCODE experimental pipeline
ENST00000389622.7	MANE_select
ENST00000394198.7	MANE_select
ENST00000333396.11	alternative 5' UTR
ENST00000506099.1	alternative 5' UTR
ENST00000647668.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000358642.2	MANE_select
ENST00000642086.1	ENA ID EGAS00001001486
ENST00000641874.1	ENA ID EGAS00001001486
ENST00000641874.1	MANE_select
ENST00000641380.1	ENA ID EGAS00001001486
ENST00000641380.1	MANE_select
ENST00000641380.1	NCBI GEO ID GSE80249
ENST00000641380.1	alternative 5' UTR
ENST00000641416.1	ENA ID EGAS00001001486
ENST00000641416.1	LOF variant in other haplotypes
ENST00000641416.1	NCBI GEO ID GSE80249
ENST00000641416.1	alternative 5' UTR
ENST00000615035.3	LOF variant in other haplotypes
ENST00000615035.3	MANE_select
ENST00000394191.3	ENA ID EGAS00001001486
ENST00000354924.2	MANE_select
ENST00000383695.1	MANE_select
ENST00000642057.1	ENA ID EGAS00001001486
ENST00000642057.1	MANE_select
ENST00000502288.5	GENCODE experimental pipeline
ENST00000507874.5	GENCODE experimental pipeline
ENST00000394180.6	alternative 5' UTR
ENST00000506885.5	GENCODE experimental pipeline
ENST00000503004.5	alternative 5' UTR
ENST00000341181.11	MANE_select
ENST00000394185.6	alternative 5' UTR
ENST00000394181.6	NP_001035272.1
ENST00000510545.5	alternative 5' UTR
ENST00000511081.5	NP_001035290.1
ENST00000513287.5	alternative 5' UTR
ENST00000513452.5	alternative 5' UTR
ENST00000502299.5	alternative 5' UTR
ENST00000508902.5	alternative 5' UTR
ENST00000514537.5	alternative 5' UTR
ENST00000515620.5	alternative 5' UTR
ENST00000507944.5	alternative 5' UTR
ENST00000508659.5	alternative 5' UTR
ENST00000508071.1	alternative 5' UTR
ENST00000506575.1	alternative 5' UTR
ENST00000284311.5	MANE_select
ENST00000654582.1	Assembled from SLRseq reads (SRP049776)
ENST00000647941.2	CAGE supported TSS
ENST00000647941.2	LR annotation
ENST00000647941.2	MANE_select
ENST00000670291.1	Assembled from SLRseq reads (SRP049776)
ENST00000654703.1	Assembled from SLRseq reads (SRP049776)
ENST00000666744.1	Assembled from SLRseq reads (SRP049776)
ENST00000664787.1	Assembled from SLRseq reads (SRP049776)
ENST00000660566.1	Assembled from SLRseq reads (SRP049776)
ENST00000667720.1	Assembled from SLRseq reads (SRP049776)
ENST00000488132.6	Assembled from SLRseq reads (SRP049776)
ENST00000658186.1	Assembled from SLRseq reads (SRP049776)
ENST00000667875.1	Assembled from SLRseq reads (SRP049776)
ENST00000654439.1	Assembled from SLRseq reads (SRP049776)
ENST00000661245.1	Assembled from SLRseq reads (SRP049776)
ENST00000667022.1	Assembled from SLRseq reads (SRP049776)
ENST00000664646.1	Assembled from SLRseq reads (SRP049776)
ENST00000663984.1	Assembled from SLRseq reads (SRP049776)
ENST00000486334.6	QC splicing correct
ENST00000486334.6	alternative 5' UTR
ENST00000485391.5	alternative 5' UTR
ENST00000485145.1	GENCODE experimental pipeline
ENST00000326840.11	MANE_select
ENST00000449482.1	GENCODE experimental pipeline
ENST00000662312.1	Assembled from SLRseq reads (SRP049776)
ENST00000666141.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655531.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660954.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452013.5	alternative 5' UTR
ENST00000261037.7	NP_001841
ENST00000652472.1	MANE_select
ENST00000652472.1	genebuild_only_MANE
ENST00000421999.8	MANE_select
ENST00000478909.5	GENCODE experimental pipeline
ENST00000477258.1	GENCODE experimental pipeline
ENST00000654821.1	Assembled from SLRseq reads (SRP049776)
ENST00000394144.9	MANE_select
ENST00000485687.5	GENCODE experimental pipeline
ENST00000475134.1	GENCODE experimental pipeline
ENST00000475134.1	QC splicing correct
ENST00000394140.9	MANE_select
ENST00000284320.6	MANE_select
ENST00000466996.5	Genoscope mRNA only
ENST00000383693.8	MANE_select
ENST00000489752.1	Genoscope mRNA only
ENST00000323523.8	MANE_select
ENST00000403410.5	GENCODE experimental pipeline
ENST00000273352.8	MANE_select
ENST00000475887.1	GENCODE experimental pipeline
ENST00000675047.1	CAGE supported TSS
ENST00000675047.1	align_id:3685726|asmbl_175891
ENST00000490574.6	CAGE supported TSS
ENST00000490574.6	align_id:3685711|asmbl_175876
ENST00000490574.6	alternative 5' UTR
ENST00000675543.1	CAGE supported TSS
ENST00000675543.1	align_id:3685727|asmbl_175892
ENST00000676308.1	CAGE supported TSS
ENST00000676308.1	align_id:3685741|asmbl_175906
ENST00000675499.1	CAGE supported TSS
ENST00000675499.1	align_id:3685717|asmbl_175882
ENST00000674699.1	align_id:3685739|asmbl_175904
ENST00000418917.7	align_id:3685744|asmbl_175909
ENST00000675553.1	align_id:3685713|asmbl_175878
ENST00000620299.5	align_id:3685718|asmbl_175883
ENST00000674798.1	align_id:3685728|asmbl_175893
ENST00000675246.1	align_id:3685724|asmbl_175889
ENST00000675692.1	align_id:3685733|asmbl_175898
ENST00000676276.1	align_id:3685732|asmbl_175897
ENST00000676054.1	align_id:3685722|asmbl_175887
ENST00000675890.1	align_id:3685731|asmbl_175896
ENST00000675011.1	align_id:3685730|asmbl_175895
ENST00000675586.1	align_id:3685725|asmbl_175890
ENST00000674645.1	align_id:3685719|asmbl_175884
ENST00000675958.1	align_id:3685729|asmbl_175894
ENST00000479672.6	align_id:3685747|asmbl_175912
ENST00000675591.1	align_id:3685745|asmbl_175910
ENST00000676010.1	align_id:3685738|asmbl_175903
ENST00000675420.1	align_id:3685736|asmbl_175901
ENST00000674615.1	align_id:3685716|asmbl_175881
ENST00000676431.1	align_id:3685735|asmbl_175900
ENST00000674758.1	align_id:3685737|asmbl_175902
ENST00000674758.1	alternative 5' UTR
ENST00000240851.9	MANE_select
ENST00000675243.1	align_id:3685714|asmbl_175879
ENST00000676111.1	align_id:3685742|asmbl_175907
ENST00000463568.6	align_id:3685734|asmbl_175899
ENST00000463568.6	alternative 5' UTR
ENST00000676395.1	align_id:3685715|asmbl_175880
ENST00000487505.6	align_id:3685712|asmbl_175877
ENST00000487505.6	alternative 5' UTR
ENST00000615993.2	align_id:3685743|asmbl_175908
ENST00000676455.1	Snaptron_GTEX_filtered_canonical_pos
ENST00000676455.1	chr3:100736705:100739360:+:1.330:509:677:GT:AG
ENST00000676455.1	intropolis_filtered_canonical_pos
ENST00000471714.6	MANE_select
ENST00000471714.6	confirm experimentally
ENST00000471714.6	upstream ATG
ENST00000284322.10	upstream ATG
ENST00000486770.7	upstream ATG
ENST00000528305.5	QC splicing correct
ENST00000495063.6	upstream ATG
ENST00000530236.6	upstream ATG
ENST00000193391.8	MANE_select
ENST00000394095.7	MANE_select
ENST00000309922.7	MANE_select
ENST00000265260.8	MANE_select
ENST00000312938.5	MANE_select
ENST00000394077.8	MANE_select
ENST00000667844.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000341893.8	MANE_select
ENST00000494050.5	GENCODE experimental pipeline
ENST00000273347.10	MANE_select
ENST00000326172.9	MANE_select
ENST00000657494.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000478083.1	not organism-supported
ENST00000658728.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669553.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000487772.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671480.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000306107.9	MANE_select
ENST00000486979.6	QC splicing correct
ENST00000394030.8	LR annotation
ENST00000394030.8	MANE_select
ENST00000645759.1	259146
ENST00000645759.1	376999
ENST00000447441.6	alternative 5' UTR
ENST00000443752.2	alternative 5' UTR
ENST00000643192.1	alternative 5' UTR
ENST00000667697.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000653375.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668075.1	Assembled from SLRseq reads (SRP049776)
ENST00000660862.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668760.1	Assembled from SLRseq reads (SRP049776)
ENST00000671682.1	Assembled from SLRseq reads (SRP049776)
ENST00000662455.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667805.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656342.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671604.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659129.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664169.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658929.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666687.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655451.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662123.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659859.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666429.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668928.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660353.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671678.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657806.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667931.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668963.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670214.1	Assembled from SLRseq reads (SRP049776)
ENST00000659605.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656555.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664426.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660515.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660263.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656235.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659503.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654704.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000662816.1	Assembled from SLRseq reads (SRP049776)
ENST00000669924.1	Assembled from SLRseq reads (SRP049776)
ENST00000660310.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657909.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660757.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665402.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667876.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655832.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659654.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665806.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661400.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654920.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000477210.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669116.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659317.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661735.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662886.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669363.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659809.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000607801.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671205.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000473636.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657720.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657720.1	GENCODE experimental pipeline
ENST00000662368.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658897.1	Assembled from RACEseq reads
ENST00000656835.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667861.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669797.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671373.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668464.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658978.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653044.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000479612.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664588.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663024.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652783.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658706.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660636.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669624.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656816.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666382.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669895.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666600.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664978.1	Assembled from SLRseq reads (SRP049776)
ENST00000656733.1	Assembled from SLRseq reads (SRP049776)
ENST00000663366.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660597.1	Assembled from SLRseq reads (SRP049776)
ENST00000669523.1	Assembled from SLRseq reads (SRP049776)
ENST00000651804.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000654269.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667603.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657097.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667620.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667442.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000495228.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663370.1	Assembled from SLRseq reads (SRP049776)
ENST00000466734.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669723.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653298.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670833.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658510.1	Assembled from SLRseq reads (SRP049776)
ENST00000660575.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667411.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657581.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662418.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665694.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667710.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659955.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653509.1	Assembled from SLRseq reads (SRP049776)
ENST00000667856.1	Assembled from SLRseq reads (SRP049776)
ENST00000655772.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659830.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667634.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671419.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666345.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658011.1	Assembled from SLRseq reads (SRP049776)
ENST00000261058.3	MANE_select
ENST00000609293.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658914.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664038.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667329.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669596.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665848.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000402543.5	GENCODE experimental pipeline
ENST00000325805.13	MANE_select
ENST00000416476.6	GENCODE experimental pipeline
ENST00000454540.5	QC splicing correct
ENST00000431630.5	GENCODE experimental pipeline
ENST00000402163.6	QC splicing correct
ENST00000458347.1	GENCODE experimental pipeline
ENST00000649048.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000661824.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659536.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667594.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665780.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670810.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654294.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665676.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669044.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660018.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656074.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666732.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655189.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653441.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664795.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000608506.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653488.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662775.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667470.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657753.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000464359.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662738.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664623.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664221.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654402.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652781.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667094.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668684.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655764.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659916.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657924.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668184.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659467.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665981.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669982.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654163.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665269.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669004.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000473528.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655880.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664360.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657888.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667116.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655401.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666614.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669373.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662730.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663588.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656409.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666591.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668129.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666444.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657775.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664025.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667930.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667812.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662882.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664670.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653096.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660345.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663423.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653396.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662126.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655953.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660798.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654391.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671051.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669919.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655585.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658864.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661558.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667044.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668583.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663457.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661985.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653371.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656947.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660460.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667016.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668522.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664451.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670825.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670846.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671339.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660536.1	Assembled from RACEseq reads
ENST00000461121.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000497811.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661001.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666132.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666919.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655909.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665140.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653978.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663199.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655963.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658615.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654469.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661906.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658750.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662148.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661131.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655371.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667333.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666880.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663486.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666616.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662334.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662048.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660352.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000611829.5	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669080.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653921.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658986.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652909.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670878.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667506.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667572.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658554.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657564.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659968.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000609429.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669522.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661095.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657127.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667924.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654791.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662526.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660921.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662954.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662623.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668484.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665328.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670568.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654744.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659652.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669684.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000609366.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651423.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000668845.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653786.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000608110.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658329.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663731.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662270.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670251.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657604.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667209.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000600749.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657498.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000607880.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670442.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608307.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000466155.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668644.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000464823.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658017.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000355354.13	1st exon found using dotter
ENST00000355354.13	CD47 antigen
ENST00000355354.13	NP_942088.1
ENST00000361309.6	1st exon found using dotter
ENST00000361309.6	CD47 antigen
ENST00000361309.6	MANE_select
ENST00000471694.1	CD47 antigen
ENST00000398258.7	CD47 antigen
ENST00000264538.4	MANE_select
ENST00000467282.5	GENCODE experimental pipeline
ENST00000463019.7	alternative 5' UTR
ENST00000482430.5	alternative 5' UTR
ENST00000462629.5	alternative 5' UTR
ENST00000467761.5	alternative 5' UTR
ENST00000489514.6	alternative 5' UTR
ENST00000295746.13	MANE_select
ENST00000361582.8	MANE_select
ENST00000479138.5	alternative 5' UTR
ENST00000497905.5	alternative 5' UTR
ENST00000484927.5	GENCODE experimental pipeline
ENST00000295756.11	MANE_select
ENST00000478830.1	GENCODE experimental pipeline
ENST00000261047.8	MANE_select
ENST00000232603.10	MANE_select
ENST00000622536.6	MANE_select
ENST00000648541.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000494582.2	Assembled from SLRseq reads (SRP049776)
ENST00000478945.1	MANE_select
ENST00000477303.1	GENCODE experimental pipeline
ENST00000652897.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663929.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000658412.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661437.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670331.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659474.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000485303.6	MANE_select
ENST00000486596.5	GENCODE experimental pipeline
ENST00000486596.5	QC splicing correct
ENST00000493615.5	GENCODE experimental pipeline
ENST00000478327.1	GENCODE experimental pipeline
ENST00000460744.1	alternative 5' UTR
ENST00000283285.10	CAGE supported TSS
ENST00000352690.9	CAGE supported TSS
ENST00000352690.9	LR annotation
ENST00000352690.9	MANE_select
ENST00000317012.5	MANE_select
ENST00000477665.2	MANE_select
ENST00000474484.1	CAGE supported TSS
ENST00000493131.1	GENCODE experimental pipeline
ENST00000393923.7	CAGE supported TSS
ENST00000431670.7	MANE_select
ENST00000498699.5	alternative 5' UTR
ENST00000393925.7	alternative 5' UTR
ENST00000653101.1	Assembled from SLRseq reads (SRP049776)
ENST00000273359.8	MANE_select
ENST00000478951.6	MANE_select
ENST00000478951.6	alternative 5' UTR
ENST00000455401.6	alternative 5' UTR
ENST00000494932.1	QC splicing correct
ENST00000486460.1	not organism-supported
ENST00000469385.1	GENCODE experimental pipeline
ENST00000452346.6	NAGNAG splice site
ENST00000452346.6	QC splicing correct
ENST00000435737.5	NAGNAG splice site
ENST00000435737.5	QC splicing correct
ENST00000419127.5	NAGNAG splice site
ENST00000419127.5	QC splicing correct
ENST00000460599.1	NAGNAG splice site
ENST00000264848.10	MANE_select
ENST00000308910.9	MANE_select
ENST00000484193.5	GENCODE experimental pipeline
ENST00000488580.5	GENCODE experimental pipeline
ENST00000487901.1	GENCODE experimental pipeline
ENST00000305815.10	MANE_select
ENST00000315711.12	MANE_select
ENST00000486726.2	not organism-supported
ENST00000334529.10	MANE_select
ENST00000283290.10	MANE_select
ENST00000484995.5	alternative 5' UTR
ENST00000468642.5	alternative 5' UTR
ENST00000492406.6	MANE_select
ENST00000206423.8	MANE_select
ENST00000439685.6	alternative 5' UTR
ENST00000475181.1	GENCODE experimental pipeline
ENST00000475181.1	alternative 5' UTR
ENST00000488794.5	alternative 5' UTR
ENST00000308611.8	MANE_select
ENST00000383678.8	MANE_select
ENST00000473129.1	GENCODE experimental pipeline
ENST00000314400.10	MANE_select
ENST00000472166.1	GENCODE experimental pipeline
ENST00000655310.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000470313.6	Assembled from SLRseq reads (SRP049776)
ENST00000663401.1	Assembled from SLRseq reads (SRP049776)
ENST00000669894.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000473008.1	GENCODE experimental pipeline
ENST00000658424.1	Assembled from SLRseq reads (SRP049776)
ENST00000393845.9	MANE_select
ENST00000488854.6	QC splicing correct
ENST00000465186.1	QC splicing correct
ENST00000489938.2	QC splicing correct
ENST00000649772.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000669165.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000467618.1	GENCODE experimental pipeline
ENST00000264852.9	MANE_select
ENST00000316407.9	MANE_select
ENST00000316407.9	genebuild_only_MANE
ENST00000491165.5	GENCODE experimental pipeline
ENST00000478658.1	not organism-supported
ENST00000240922.8	MANE_select
ENST00000497255.1	GENCODE experimental pipeline
ENST00000497255.1	QC splicing correct
ENST00000493454.5	alternative 5' UTR
ENST00000467022.1	GENCODE experimental pipeline
ENST00000273398.8	MANE_select
ENST00000475322.1	alternative 5' UTR
ENST00000461496.1	QC splicing correct
ENST00000358160.9	MANE_select
ENST00000463760.2	NMD likely if extended
ENST00000463760.2	QC splicing correct
ENST00000484714.2	QC splicing correct
ENST00000472026.5	GENCODE experimental pipeline
ENST00000462838.5	alternative 5' UTR
ENST00000491556.1	alternative 5' UTR
ENST00000488129.1	GENCODE experimental pipeline
ENST00000496083.1	QC splicing correct
ENST00000295878.8	MANE_select
ENST00000480588.1	not organism-supported
ENST00000664413.1	Assembled from SLRseq reads (SRP049776)
ENST00000647576.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000281273.8	MANE_select
ENST00000482307.1	QC splicing correct
ENST00000383673.5	MANE_select
ENST00000467632.5	alternative 5' UTR
ENST00000482457.4	MANE_select
ENST00000461158.5	alternative 5' UTR
ENST00000383671.8	MANE_select
ENST00000383671.8	genebuild_only_MANE
ENST00000675478.1	CAGE supported TSS
ENST00000675478.1	MANE_select
ENST00000462705.5	alternative 5' UTR
ENST00000481632.5	alternative 5' UTR
ENST00000464560.5	alternative 5' UTR
ENST00000470311.5	alternative 5' UTR
ENST00000482689.5	alternative 5' UTR
ENST00000468769.1	GENCODE experimental pipeline
ENST00000470186.1	QC splicing correct
ENST00000570269.2	confirm experimentally
ENST00000659395.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654216.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000467304.2	Assembled from RACEseq reads
ENST00000659927.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657013.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651682.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000657808.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000487814.1	GENCODE experimental pipeline
ENST00000498630.1	GENCODE experimental pipeline
ENST00000653398.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663637.1	Assembled from SLRseq reads (SRP049776)
ENST00000662602.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663677.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667087.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661932.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661932.1	Assembled from SLRseq reads (SRP049776)
ENST00000657371.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000656753.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000459855.2	Assembled from SLRseq reads (SRP049776)
ENST00000664278.1	Assembled from SLRseq reads (SRP049776)
ENST00000657664.1	Assembled from SLRseq reads (SRP049776)
ENST00000305124.11	MANE_select
ENST00000490035.7	MANE_select
ENST00000665622.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660554.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000496242.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665851.1	Assembled from SLRseq reads (SRP049776)
ENST00000493545.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665643.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665283.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662843.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660985.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659069.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000496994.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656611.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656192.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656192.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000655238.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671465.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000482766.1	GENCODE experimental pipeline
ENST00000476460.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657445.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656350.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668816.1	Assembled from RACEseq reads
ENST00000667867.1	Assembled from RACEseq reads
ENST00000393775.7	MANE_select
ENST00000483401.5	GENCODE experimental pipeline
ENST00000669213.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000494105.2	not organism-supported
ENST00000295622.6	MANE_select
ENST00000460150.1	GENCODE experimental pipeline
ENST00000473121.1	GENCODE experimental pipeline
ENST00000492792.1	GENCODE experimental pipeline
ENST00000497685.5	GENCODE experimental pipeline
ENST00000264234.8	MANE_select
ENST00000479520.5	alternative 5' UTR
ENST00000494855.5	alternative 5' UTR
ENST00000393765.7	MANE_select
ENST00000393765.7	alternative 5' UTR
ENST00000359213.7	alternative 5' UTR
ENST00000475803.5	alternative 5' UTR
ENST00000479150.5	alternative 5' UTR
ENST00000470111.5	alternative 5' UTR
ENST00000493932.5	alternative 5' UTR
ENST00000473887.5	alternative 5' UTR
ENST00000459778.5	alternative 5' UTR
ENST00000459820.5	alternative 5' UTR
ENST00000479308.1	GENCODE experimental pipeline
ENST00000657819.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000264245.9	MANE_select
ENST00000319172.10	MANE_select
ENST00000473684.5	non canonical conserved
ENST00000491685.5	GENCODE experimental pipeline
ENST00000295588.9	MANE_select
ENST00000647766.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000493694.1	GENCODE experimental pipeline
ENST00000494664.6	MANE_select
ENST00000264246.8	MANE_select
ENST00000273371.9	MANE_select
ENST00000494440.5	GENCODE experimental pipeline
ENST00000475963.1	GENCODE experimental pipeline
ENST00000495362.1	QC splicing correct
ENST00000493094.6	GENCODE experimental pipeline
ENST00000493094.6	MANE_select
ENST00000484810.5	GENCODE experimental pipeline
ENST00000261070.7	MANE_select
ENST00000671109.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000273390.9	MANE_select
ENST00000273390.9	NP_203528.2
ENST00000648112.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000393716.8	MANE_select
ENST00000264235.13	CCDS54628.1
ENST00000264235.13	MANE_select
ENST00000316626.6	CCDS2996.1
ENST00000678439.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000676910.1	Ensembl_RNAseq_introns
ENST00000676910.1	Snaptron_GTEX
ENST00000676910.1	intropolis_filtered
ENST00000679201.1	Ensembl_RNAseq_introns
ENST00000679201.1	Snaptron_GTEX
ENST00000679201.1	intropolis_filtered
ENST00000678013.1	Ensembl_RNAseq_introns
ENST00000678013.1	Snaptron_GTEX
ENST00000678013.1	intropolis_filtered
ENST00000676566.1	intropolis_filtered
ENST00000676566.1	pacbio_capture_seq_align_align_id:1347362|asmbl_67265
ENST00000677502.1	intropolis_filtered
ENST00000677502.1	pacbio_capture_seq_align_id:1347362|asmbl_67265
ENST00000650344.2	Ensembl_RNAseq_introns
ENST00000650344.2	SLRseq_PASA_cluster_15616_align_id:3686913|asmbl_177078
ENST00000678159.1	Snaptron_GTEX
ENST00000678159.1	intropolis_filtered
ENST00000679068.1	Snaptron_GTEX
ENST00000679206.1	Snaptron_GTEX
ENST00000677959.1	Snaptron_GTEX
ENST00000677959.1	intropolis_filtered
ENST00000678286.1	Snaptron_GTEX
ENST00000678286.1	intropolis_filtered
ENST00000679194.1	Snaptron_GTEX
ENST00000679194.1	intropolis_filtered
ENST00000677362.1	intropolis_filtered
ENST00000677716.1	Snaptron_GTEX
ENST00000678121.1	pacbio_capture_seq_id:1347364|asmbl_67267
ENST00000473886.2	Snaptron_GTEX
ENST00000678342.1	Snaptron_GTEX
ENST00000678064.1	Ensembl_RNAseq_introns
ENST00000678064.1	Snaptron_GTEX
ENST00000678064.1	intropolis_filtered
ENST00000676948.1	intropolis_filtered
ENST00000676887.1	Snaptron_GTEX
ENST00000678561.1	Ensembl_RNAseq_introns
ENST00000678561.1	SLR-seq_TB0000034
ENST00000678561.1	Snaptron_GTEX
ENST00000678561.1	intropolis_filtered
ENST00000678181.1	Ensembl_RNAseq_introns
ENST00000676844.1	Snaptron_GTEX
ENST00000676844.1	intropolis_filtered
ENST00000677046.1	intropolis_filtered
ENST00000678210.1	Snaptron_GTEX
ENST00000678210.1	intropolis_filtered
ENST00000677069.1	Snaptron_GTEX
ENST00000677069.1	intropolis_filtered
ENST00000677483.1	intropolis_filtered
ENST00000678509.1	Snaptron_GTEX
ENST00000678509.1	intropolis_filtered
ENST00000677648.1	intropolis_filtered
ENST00000678377.1	Ensembl_RNAseq_introns
ENST00000678377.1	Snaptron_GTEX
ENST00000678377.1	intropolis_filtered
ENST00000677995.1	Snaptron_GTEX
ENST00000677995.1	intropolis_filtered
ENST00000679188.1	intropolis_filtered
ENST00000679066.1	Ensembl_RNAseq_introns
ENST00000678787.1	intropolis_filtered
ENST00000677788.1	SLR-seq_HsBN_lib10
ENST00000677788.1	Snaptron_GTEX
ENST00000677788.1	intropolis_filtered
ENST00000677788.1	slrseq_align_id:3686916|asmbl_177081
ENST00000676890.1	intropolis_filtered
ENST00000678754.1	intropolis_filtered
ENST00000679085.1	intropolis_filtered
ENST00000678245.1	SLR-seq_HsBN_lib11_id:3686917|asmbl_177082
ENST00000678678.1	Ensembl_RNAseq_introns
ENST00000678678.1	Snaptron_GTEX
ENST00000678678.1	intropolis_filtered
ENST00000676733.1	intropolis_filtered
ENST00000677067.1	intropolis_filtered
ENST00000677400.1	Ensembl_RNAseq_introns
ENST00000677400.1	Snaptron_GTEX
ENST00000677400.1	intropolis_filtered
ENST00000677885.1	intropolis_filtered
ENST00000677169.1	intropolis_filtered
ENST00000677804.1	Snaptron_GTEX
ENST00000677804.1	intropolis_filtered
ENST00000676723.1	Snaptron_GTEX
ENST00000676723.1	intropolis_filtered
ENST00000679164.1	intropolis_filtered
ENST00000677875.1	intropolis_filtered
ENST00000678350.1	Snaptron_GTEX
ENST00000678350.1	intropolis_filtered
ENST00000676775.1	Snaptron_GTEX
ENST00000676775.1	intropolis_filtered
ENST00000677878.1	Snaptron_GTEX
ENST00000677878.1	intropolis_filtered
ENST00000678967.1	Snaptron_GTEX
ENST00000677870.1	Snaptron_GTEX
ENST00000677870.1	intropolis_filtered
ENST00000678608.1	Snaptron_GTEX
ENST00000678608.1	intropolis_filtered
ENST00000677128.1	intropolis_filtered
ENST00000676722.1	pacbio_capture_seq_seq_hsK562
ENST00000677530.1	SLR-seq_TB0000034_align_id:3686918|asmbl_177083
ENST00000676650.1	pacbio_capture_seq_hsK562
ENST00000679131.1	intropolis_filtered
ENST00000677034.1	intropolis_filtered
ENST00000676743.1	intropolis_filtered
ENST00000677423.1	Snaptron_GTEX
ENST00000677423.1	alternative 5' UTR
ENST00000677423.1	intropolis_filtered
ENST00000677903.1	Snaptron_GTEX
ENST00000677903.1	alternative 5' UTR
ENST00000677903.1	intropolis_filtered
ENST00000677338.1	Snaptron_GTEX
ENST00000677338.1	intropolis_filtered
ENST00000678483.1	Snaptron_GTEX
ENST00000678483.1	intropolis_filtered
ENST00000679337.1	Snaptron_GTEX
ENST00000679337.1	intropolis_filtered
ENST00000485898.2	Assembled from SLRseq reads (SRP049776)
ENST00000464295.6	MANE_select
ENST00000295628.4	MANE_select
ENST00000637360.1	GENCODE experimental pipeline
ENST00000295633.8	MANE_select
ENST00000469005.1	alternative 5' UTR
ENST00000659560.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000184266.3	MANE_select
ENST00000283871.10	MANE_select
ENST00000475447.2	GENCODE experimental pipeline
ENST00000494453.1	GENCODE experimental pipeline
ENST00000476082.2	<
ENST00000476082.2	GENCODE experimental pipeline
ENST00000476082.2	QC splicing correct
ENST00000273375.8	MANE_select
ENST00000648525.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000483733.1	QC splicing correct
ENST00000484715.1	alternative 5' UTR
ENST00000492959.1	alternative 5' UTR
ENST00000283875.6	MANE_select
ENST00000661060.1	Assembled from SLRseq reads (SRP049776)
ENST00000664712.1	Assembled from SLRseq reads (SRP049776)
ENST00000668252.1	Assembled from SLRseq reads (SRP049776)
ENST00000655299.1	Assembled from SLRseq reads (SRP049776)
ENST00000658056.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000471454.6	MANE_select
ENST00000497029.5	QC splicing correct
ENST00000495504.5	alternative 5' UTR
ENST00000471262.1	QC splicing correct
ENST00000666486.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000264233.6	MANE_select
ENST00000334384.5	MANE_select
ENST00000338040.6	MANE_select
ENST00000314583.8	MANE_select
ENST00000472475.1	alternative 5' UTR
ENST00000310864.11	MANE_select
ENST00000462442.1	alternative 5' UTR
ENST00000273668.7	MANE_select
ENST00000489711.6	MANE_select
ENST00000344209.10	LR annotation
ENST00000344209.10	MANE_select
ENST00000330540.7	MANE_select
ENST00000478741.1	QC splicing correct
ENST00000639785.2	MANE_select
ENST00000638421.1	alternative 5' UTR
ENST00000264474.4	MANE_select
ENST00000291458.9	MANE_select
ENST00000497726.5	QC splicing correct
ENST00000232125.9	GENCODE experimental pipeline
ENST00000477892.5	MANE_select
ENST00000330689.6	MANE_select
ENST00000608756.5	CAGE supported TSS
ENST00000609469.5	CAGE supported TSS
ENST00000667395.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000608346.1	CAGE supported TSS
ENST00000608465.5	CAGE supported TSS
ENST00000608015.1	CAGE supported TSS
ENST00000344337.11	MANE_select
ENST00000465882.5	alternative 5' UTR
ENST00000482287.5	alternative 5' UTR
ENST00000493510.1	alternative 5' UTR
ENST00000659697.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000466126.1	GENCODE experimental pipeline
ENST00000296161.9	MANE_select
ENST00000464300.7	MANE_select
ENST00000474629.7	MANE_select
ENST00000474629.7	NP_060024.2
ENST00000649945.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000306103.3	MANE_select
ENST00000261038.6	MANE_select
ENST00000357599.8	MANE_select
ENST00000421053.5	alternative 5' UTR
ENST00000449546.1	alternative 5' UTR
ENST00000316218.12	MANE_select
ENST00000484644.5	GENCODE experimental pipeline
ENST00000466950.5	QC splicing correct
ENST00000492595.6	MANE_select
ENST00000473494.6	QC splicing correct
ENST00000473494.6	alternative 5' UTR
ENST00000491366.5	non canonical conserved
ENST00000487572.5	non canonical conserved
ENST00000462833.6	MANE_select
ENST00000491190.5	GENCODE experimental pipeline
ENST00000383657.10	MANE_select
ENST00000662316.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664745.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657993.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665710.1	Assembled from SLRseq reads (SRP049776)
ENST00000664237.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000360304.8	CAGE supported TSS
ENST00000360304.8	MANE_select
ENST00000578202.1	NAGNAG splice site
ENST00000409697.8	CAGE supported TSS
ENST00000409697.8	MANE_select
ENST00000485727.5	alternative 5' UTR
ENST00000310351.8	CAGE supported TSS
ENST00000433542.7	CAGE supported TSS
ENST00000433542.7	NP_073594.5
ENST00000433542.7	upstream ATG
ENST00000419247.5	GENCODE experimental pipeline
ENST00000291478.9	NP_008995.2
ENST00000462213.2	GENCODE experimental pipeline
ENST00000232607.7	MANE_select
ENST00000296181.9	MANE_select
ENST00000481591.5	GENCODE experimental pipeline
ENST00000616727.4	MANE_select
ENST00000311127.9	MANE_select
ENST00000650592.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000480667.1	GENCODE experimental pipeline
ENST00000477536.1	GENCODE experimental pipeline
ENST00000660549.1	Assembled from SLRseq reads (SRP049776)
ENST00000469902.6	MANE_select
ENST00000469902.6	alternative 5' UTR
ENST00000462437.1	GENCODE experimental pipeline
ENST00000481760.2	GENCODE experimental pipeline
ENST00000360647.9	MANE_select
ENST00000492394.5	alternative 5' UTR
ENST00000485866.5	alternative 5' UTR
ENST00000497929.1	QC splicing correct
ENST00000496732.1	GENCODE experimental pipeline
ENST00000465763.5	alternative 5' UTR
ENST00000495019.5	alternative 5' UTR
ENST00000471196.1	alternative 5' UTR
ENST00000251775.9	MANE_select
ENST00000465505.2	not organism-supported
ENST00000296220.6	MANE_select
ENST00000659117.1	Assembled from SLRseq reads (SRP049776)
ENST00000664857.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657594.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608488.1	nested 454 RNA-Seq supported
ENST00000650374.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000510244.1	QC splicing correct
ENST00000514116.6	MANE_select
ENST00000514116.6	alternative 5' UTR
ENST00000513830.5	alternative 5' UTR
ENST00000508088.1	alternative 5' UTR
ENST00000505382.5	alternative 5' UTR
ENST00000360370.9	MANE_select
ENST00000360370.9	NP_060306.3
ENST00000514677.5	GENCODE experimental pipeline
ENST00000513723.5	GENCODE experimental pipeline
ENST00000512470.5	alternative 5' UTR
ENST00000514333.5	QC splicing correct
ENST00000514333.5	alternative 5' UTR
ENST00000507280.5	alternative 5' UTR
ENST00000514891.5	alternative 5' UTR
ENST00000504035.5	alternative 5' UTR
ENST00000509064.5	alternative 5' UTR
ENST00000509452.1	alternative 5' UTR
ENST00000661819.1	Assembled from SLRseq reads (SRP049776)
ENST00000507924.1	GENCODE experimental pipeline
ENST00000656531.1	Assembled from SLRseq reads (SRP049776)
ENST00000273450.7	GENCODE experimental pipeline
ENST00000393434.7	MANE_select
ENST00000472186.5	alternative 5' UTR
ENST00000490367.5	alternative 5' UTR
ENST00000460368.5	alternative 5' UTR
ENST00000488356.5	alternative 5' UTR
ENST00000509952.5	alternative 5' UTR
ENST00000654154.1	Assembled from SLRseq reads (SRP049776)
ENST00000502278.1	GENCODE experimental pipeline
ENST00000670210.1	Assembled from SLRseq reads (SRP049776)
ENST00000661474.1	Assembled from SLRseq reads (SRP049776)
ENST00000669278.1	Assembled from SLRseq reads (SRP049776)
ENST00000662991.1	Assembled from SLRseq reads (SRP049776)
ENST00000664376.1	Assembled from SLRseq reads (SRP049776)
ENST00000654476.1	Assembled from SLRseq reads (SRP049776)
ENST00000670252.1	Assembled from SLRseq reads (SRP049776)
ENST00000669206.1	Assembled from SLRseq reads (SRP049776)
ENST00000666921.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000511512.1	GENCODE experimental pipeline
ENST00000656027.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665278.1	Assembled from SLRseq reads (SRP049776)
ENST00000661791.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654226.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000514281.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670909.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652931.1	Assembled from SLRseq reads (SRP049776)
ENST00000296233.4	MANE_select
ENST00000509675.1	GENCODE experimental pipeline
ENST00000663827.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652761.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000511287.5	GENCODE experimental pipeline
ENST00000656710.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666570.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000352312.6	MANE_select
ENST00000389709.8	MANE_select
ENST00000290868.7	MANE_select
ENST00000319340.7	MANE_select
ENST00000318225.3	MANE_select
ENST00000524230.9	MANE_select
ENST00000524230.9	NP_443115.1
ENST00000523403.3	NP_001166984
ENST00000290913.8	MANE_select
ENST00000504973.5	QC splicing correct
ENST00000654542.1	Assembled from SLRseq reads (SRP049776)
ENST00000624688.2	MANE_select
ENST00000667880.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000465482.3	CAGE supported TSS
ENST00000465482.3	MANE_select
ENST00000663573.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654968.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662154.1	Assembled from SLRseq reads (SRP049776)
ENST00000656238.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661372.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661186.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661801.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653243.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655132.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655927.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660032.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665475.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664674.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656000.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663921.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000666461.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661192.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667958.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657345.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664267.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656310.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654267.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659207.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669420.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668773.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660384.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666120.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658306.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658380.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000634941.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653663.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655862.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667598.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667355.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663252.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000673823.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657746.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662405.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000658009.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000634855.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660160.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655078.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662765.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000355552.8	MANE_select
ENST00000648957.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000450633.6	alternative 5' UTR
ENST00000483868.5	Genoscope mRNA only
ENST00000489960.5	alternative 5' UTR
ENST00000490290.5	alternative 5' UTR
ENST00000469111.5	alternative 5' UTR
ENST00000490643.5	QC splicing correct
ENST00000490643.5	alternative 5' UTR
ENST00000462228.1	alternative 5' UTR
ENST00000265056.12	MANE_select
ENST00000491422.1	GENCODE experimental pipeline
ENST00000650122.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000342480.7	MANE_select
ENST00000232744.13	MANE_select
ENST00000468137.5	alternative 5' UTR
ENST00000491633.5	non canonical TEC
ENST00000398101.7	GENCODE experimental pipeline
ENST00000648300.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000494830.1	alternative 5' UTR
ENST00000661670.1	Assembled from SLRseq reads (SRP049776)
ENST00000405109.5	MANE_select
ENST00000407609.7	GENCODE experimental pipeline
ENST00000343941.4	GENCODE experimental pipeline
ENST00000464451.5	GENCODE experimental pipeline
ENST00000481210.5	GENCODE experimental pipeline
ENST00000243253.8	MANE_select
ENST00000464873.5	GENCODE experimental pipeline
ENST00000322623.10	MANE_select
ENST00000478892.1	GENCODE experimental pipeline
ENST00000254730.11	MANE_select
ENST00000649080.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000469083.1	alternative 5' UTR
ENST00000341105.7	MANE_select
ENST00000487848.5	alternative 5' UTR
ENST00000492608.1	alternative 5' UTR
ENST00000498200.1	alternative 5' UTR
ENST00000669945.1	Assembled from SLRseq reads (SRP049776)
ENST00000662068.1	Assembled from SLRseq reads (SRP049776)
ENST00000296255.8	MANE_select
ENST00000676425.1	align_id:3688050|asmbl_178215
ENST00000675864.1	align_id:3688040|asmbl_178205
ENST00000490093.6	compmerge.3399.pooled.chr3
ENST00000675342.1	align_id:3688019|asmbl_178184
ENST00000674748.1	long_read_pipeline_2
ENST00000265062.8	MANE_select
ENST00000675497.1	align_id:3688018|asmbl_178183
ENST00000464496.5	alternative 5' UTR
ENST00000483906.5	GENCODE experimental pipeline
ENST00000485280.1	GENCODE experimental pipeline
ENST00000676147.1	align_id:3688024|asmbl_178189
ENST00000674593.1	align_id:3688025|asmbl_178190
ENST00000498297.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653122.1	Assembled from RACEseq reads
ENST00000308982.12	MANE_select
ENST00000679715.1	CAGE supported TSS
ENST00000511526.5	non canonical TEC
ENST00000515659.1	GENCODE experimental pipeline
ENST00000307395.5	MANE_select
ENST00000393304.5	alternative 5' UTR
ENST00000393308.5	alternative 5' UTR
ENST00000393307.5	alternative 5' UTR
ENST00000393305.5	alternative 5' UTR
ENST00000315150.10	MANE_select
ENST00000457077.1	alternative 5' UTR
ENST00000418265.1	NP_001191819.1
ENST00000393295.8	MANE_select
ENST00000393292.7	GENCODE experimental pipeline
ENST00000422453.7	MANE_select
ENST00000451728.6	non canonical TEC
ENST00000446936.6	non canonical conserved
ENST00000441626.6	non canonical conserved
ENST00000314797.10	CCDS33851.1
ENST00000314797.10	MANE_select
ENST00000652851.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000509042.5	GENCODE experimental pipeline
ENST00000383463.9	CCDS33852.1
ENST00000383463.9	MANE_select
ENST00000502878.6	alternative 5' UTR
ENST00000389735.7	alternative 5' UTR
ENST00000333762.6	MANE_select
ENST00000502789.2	QC splicing correct
ENST00000505956.6	MANE_select
ENST00000429544.7	MANE_select
ENST00000249910.5	CCDS3058.1
ENST00000347300.6	NM_018262.2
ENST00000296266.7	NM_052985.1
ENST00000348417.7	MANE_select
ENST00000504021.5	non canonical TEC
ENST00000349441.6	NM_052990.1
ENST00000511498.1	alternative 5' UTR
ENST00000511425.5	or is this novel beacuse its quite close to a splice site at the begining
ENST00000296271.4	MANE_select
ENST00000503977.1	GENCODE experimental pipeline
ENST00000504689.1	GENCODE experimental pipeline
ENST00000324093.9	MANE_select
ENST00000648771.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000513411.5	alternative 5' UTR
ENST00000503256.5	GENCODE experimental pipeline
ENST00000509440.5	GENCODE experimental pipeline
ENST00000605830.6	SLR-seq_TB0000034 : TB0000034-DNA_A01-LRAAD-01:Read_297162-Barcode=BC072:length=1403 ;
ENST00000605698.2	Assembled from SLRseq reads (SRP049776)
ENST00000671446.1	Assembled from SLRseq reads (SRP049776)
ENST00000653304.1	Assembled from SLRseq reads (SRP049776)
ENST00000604747.1	non canonical TEC
ENST00000507066.1	QC splicing correct
ENST00000302649.4	MANE_select
ENST00000425059.1	MANE_select
ENST00000425059.1	QC splicing correct
ENST00000665912.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658712.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000504808.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000504808.3	GENCODE experimental pipeline
ENST00000668664.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670900.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670900.1	Assembled from SLRseq reads (SRP049776)
ENST00000507856.1	GENCODE experimental pipeline
ENST00000659120.1	Assembled from SLRseq reads (SRP049776)
ENST00000671047.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000542114.1	QC splicing correct
ENST00000512836.5	GENCODE experimental pipeline
ENST00000373157.8	Supporting allele has a single nucleotide deltion in the second to last exon
ENST00000512482.1	QC splicing correct
ENST00000356763.8	MANE_select
ENST00000507330.5	alternative 5' UTR
ENST00000512430.1	alternative 5' UTR
ENST00000647973.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000504381.5	NP_001186111
ENST00000509150.1	GENCODE experimental pipeline
ENST00000510168.6	CAGE supported TSS
ENST00000510168.6	MANE_select
ENST00000510168.6	alternative 5' UTR
ENST00000505072.5	alternative 5' UTR
ENST00000509662.5	alternative 5' UTR
ENST00000428331.6	alternative 5' UTR
ENST00000422190.6	alternative 5' UTR
ENST00000508297.2	alternative 5' UTR
ENST00000514044.5	GENCODE experimental pipeline
ENST00000264992.8	MANE_select
ENST00000505545.5	alternative 5' UTR
ENST00000504725.1	alternative 5' UTR
ENST00000509060.1	alternative 5' UTR
ENST00000383366.9	MANE_select
ENST00000513550.1	GENCODE experimental pipeline
ENST00000507967.1	GENCODE experimental pipeline
ENST00000508196.5	CCDS3069.1
ENST00000511339.5	GENCODE experimental pipeline
ENST00000662294.1	Assembled from SLRseq reads (SRP049776)
ENST00000668739.1	Assembled from SLRseq reads (SRP049776)
ENST00000662182.1	Assembled from RACEseq reads
ENST00000660567.1	Assembled from SLRseq reads (SRP049776)
ENST00000521288.2	MANE_select
ENST00000521288.2	NP_689608.2
ENST00000264995.8	MANE_select
ENST00000425847.6	GENCODE experimental pipeline
ENST00000510154.1	GENCODE experimental pipeline
ENST00000510154.1	alternative 5' UTR
ENST00000661875.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655300.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662605.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669677.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663361.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666946.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666150.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660541.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655982.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653985.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000511604.5	alternative 5' UTR
ENST00000511604.5	non canonical TEC
ENST00000502818.5	alternative 5' UTR
ENST00000505881.5	alternative 5' UTR
ENST00000514999.5	alternative 5' UTR
ENST00000505957.1	GENCODE experimental pipeline
ENST00000505957.1	alternative 5' UTR
ENST00000505331.1	QC splicing correct
ENST00000495911.5	GENCODE experimental pipeline
ENST00000475741.5	GENCODE experimental pipeline
ENST00000336375.10	MANE_select
ENST00000260818.11	MANE_select
ENST00000650455.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000506813.1	QC splicing correct
ENST00000264990.11	MANE_select
ENST00000249887.3	MANE_select
ENST00000264991.8	alternative 5' UTR
ENST00000468022.5	QC splicing correct
ENST00000356232.10	MANE_select
ENST00000473651.5	Genoscope mRNA only
ENST00000464068.5	GENCODE experimental pipeline
ENST00000337331.10	MANE_select
ENST00000512094.5	GENCODE experimental pipeline
ENST00000489343.5	NCRNA00119
ENST00000504440.1	NCRNA00119
ENST00000505557.1	GENCODE experimental pipeline
ENST00000321871.11	MANE_select
ENST00000393130.7	alternative 5' UTR
ENST00000514894.5	GENCODE experimental pipeline
ENST00000514894.5	alternative 5' UTR
ENST00000512137.5	alternative 5' UTR
ENST00000511555.5	alternative 5' UTR
ENST00000510183.1	QC splicing correct
ENST00000510183.1	alternative 5' UTR
ENST00000505721.2	Assembled from SLRseq reads (SRP049776)
ENST00000302334.3	MANE_select
ENST00000513441.1	QC splicing correct
ENST00000264993.8	MANE_select
ENST00000508481.5	alternative 5' UTR
ENST00000420115.6	NP_001127895.1
ENST00000504867.5	GENCODE experimental pipeline
ENST00000504867.5	alternative 5' UTR
ENST00000507408.5	alternative 5' UTR
ENST00000511392.5	alternative 5' UTR
ENST00000515421.1	GENCODE experimental pipeline
ENST00000515421.1	alternative 5' UTR
ENST00000260810.10	MANE_select
ENST00000642236.1	GENCODE experimental pipeline
ENST00000402696.9	MANE_select
ENST00000484684.1	alternative 5' UTR
ENST00000678299.1	MANE_select
ENST00000650377.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000285208.9	MANE_select
ENST00000477759.5	QC splicing correct
ENST00000460865.3	QC splicing correct
ENST00000488969.1	alternative 5' UTR
ENST00000310926.11	MANE_select
ENST00000493729.5	GENCODE experimental pipeline
ENST00000481359.3	not organism-supported
ENST00000483245.1	GENCODE experimental pipeline
ENST00000460933.5	non canonical other
ENST00000623711.4	MANE_select
ENST00000249883.10	MANE_select
ENST00000514516.5	GENCODE experimental pipeline
ENST00000510560.1	alternative 5' UTR
ENST00000504234.1	alternative 5' UTR
ENST00000505596.1	alternative 5' UTR
ENST00000506107.1	alternative 5' UTR
ENST00000515172.1	alternative 5' UTR
ENST00000502491.1	alternative 5' UTR
ENST00000354910.10	MANE_select
ENST00000354910.10	alternative 5' UTR
ENST00000514612.5	alternative 5' UTR
ENST00000511751.1	alternative 5' UTR
ENST00000650279.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000511574.5	alternative 5' UTR
ENST00000675561.1	MANE_select
ENST00000675561.1	compmerge.3647.pooled.chr3
ENST00000512894.5	alternative 5' UTR
ENST00000606977.5	alternative 5' UTR
ENST00000467013.1	GENCODE experimental pipeline
ENST00000472904.5	GENCODE experimental pipeline
ENST00000398015.8	MANE_select
ENST00000647596.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000488154.5	NMD candidate
ENST00000497173.5	alternative 5' UTR
ENST00000473867.5	QC splicing correct
ENST00000473867.5	alternative 5' UTR
ENST00000474732.1	alternative 5' UTR
ENST00000423778.7	MANE_select
ENST00000656103.1	Assembled from SLRseq reads (SRP049776)
ENST00000649588.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000657821.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655873.1	Assembled from SLRseq reads (SRP049776)
ENST00000653803.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000466206.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657055.1	Assembled from SLRseq reads (SRP049776)
ENST00000653585.1	Assembled from SLRseq reads (SRP049776)
ENST00000459861.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658465.1	Assembled from SLRseq reads (SRP049776)
ENST00000473001.2	Assembled from SLRseq reads (SRP049776)
ENST00000264977.8	MANE_select
ENST00000309993.3	MANE_select
ENST00000251654.9	MANE_select
ENST00000490504.5	GENCODE experimental pipeline
ENST00000483687.5	GENCODE experimental pipeline
ENST00000471595.5	GENCODE experimental pipeline
ENST00000474833.5	Subject to NMD if additional splicing supported
ENST00000494742.5	GENCODE experimental pipeline
ENST00000383202.7	MANE_select
ENST00000480733.1	possible retained intron
ENST00000654446.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000393079.3	alternative 5' UTR
ENST00000446465.3	MANE_select
ENST00000661609.1	Assembled from SLRseq reads (SRP049776)
ENST00000666310.1	Assembled from SLRseq reads (SRP049776)
ENST00000461864.6	Assembled from SLRseq reads (SRP049776)
ENST00000470236.2	Assembled from SLRseq reads (SRP049776)
ENST00000667524.1	Assembled from SLRseq reads (SRP049776)
ENST00000670711.1	Assembled from SLRseq reads (SRP049776)
ENST00000666660.1	Assembled from SLRseq reads (SRP049776)
ENST00000663856.1	Assembled from SLRseq reads (SRP049776)
ENST00000481752.6	MANE_select
ENST00000481752.6	alternative 5' UTR
ENST00000491539.5	alternative 5' UTR
ENST00000485096.5	alternative 5' UTR
ENST00000476286.1	alternative 5' UTR
ENST00000488930.5	GENCODE experimental pipeline
ENST00000469404.1	GENCODE experimental pipeline
ENST00000329582.9	MANE_select
ENST00000462176.2	GENCODE experimental pipeline
ENST00000306087.3	MANE_select
ENST00000654610.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654543.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661982.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661982.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000652948.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655048.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000471091.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671510.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000469216.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667229.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664320.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000478772.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662157.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000465283.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654450.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660863.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667692.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662180.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660613.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666528.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666528.1	Assembled from RACEseq reads
ENST00000183605.10	MANE_select
ENST00000327532.7	MANE_select
ENST00000469243.5	alternative 5' UTR
ENST00000467030.5	alternative 5' UTR
ENST00000492010.1	alternative 5' UTR
ENST00000236709.4	MANE_select
ENST00000260803.9	MANE_select
ENST00000477557.3	not organism-supported
ENST00000469044.6	MANE_select
ENST00000461600.5	alternative 5' UTR
ENST00000466749.5	alternative 5' UTR
ENST00000358441.6	alternative 5' UTR
ENST00000468560.1	alternative 5' UTR
ENST00000469860.2	GENCODE experimental pipeline
ENST00000464181.2	not organism-supported
ENST00000333911.9	MANE_select
ENST00000475751.5	alternative 5' UTR
ENST00000423968.7	MANE_select
ENST00000423968.7	alternative 5' UTR
ENST00000494949.5	alternative 5' UTR
ENST00000475711.5	alternative 5' UTR
ENST00000461114.1	GENCODE experimental pipeline
ENST00000474559.1	alternative 5' UTR
ENST00000389567.9	MANE_select
ENST00000264982.8	MANE_select
ENST00000484888.5	alternative 5' UTR
ENST00000470159.5	alternative 5' UTR
ENST00000485115.1	alternative 5' UTR
ENST00000338446.8	NP_001028202.1
ENST00000360570.7	NP_001028203.1
ENST00000393035.6	alternative 5' UTR
ENST00000464668.5	alternative 5' UTR
ENST00000479848.1	alternative 5' UTR
ENST00000674063.1	MANE_select
ENST00000462294.1	GENCODE experimental pipeline
ENST00000462294.1	QC splicing correct
ENST00000483968.5	alternative 5' UTR
ENST00000465581.1	alternative 5' UTR
ENST00000648323.1	CAGE supported TSS
ENST00000648323.1	LR annotation
ENST00000648323.1	MANE_select
ENST00000383165.4	MANE_select
ENST00000383163.4	LOC285556
ENST00000383163.4	MANE_select
ENST00000495225.1	GENCODE experimental pipeline
ENST00000680020.1	CAGE supported TSS
ENST00000680020.1	MANE_select
ENST00000680020.1	alternative 5' UTR
ENST00000310776.9	CAGE supported TSS
ENST00000465373.5	GENCODE experimental pipeline
ENST00000329447.5	CCDS33868.1
ENST00000329447.5	FLJ46116
ENST00000329447.5	MANE_select
ENST00000413199.1	FLJ46210
ENST00000413199.1	MANE_select
ENST00000656212.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000502734.2	align_id:3689423|asmbl_179588
ENST00000502734.2	long_read_pipeline_2
ENST00000677882.1	align_id:3689402|asmbl_179567
ENST00000677601.1	align_id:3689392|asmbl_179557
ENST00000677309.1	align_id:3689395|asmbl_179560
ENST00000677309.1	long_read_pipeline_2
ENST00000503326.6	GENCODE experimental pipeline
ENST00000676700.1	long_read_pipeline
ENST00000333188.10	MANE_select
ENST00000514508.2	alternative 5' UTR
ENST00000514508.2	long_read_pipeline_2
ENST00000512242.6	align_id:3689386|asmbl_179551
ENST00000512242.6	alternative 5' UTR
ENST00000512153.5	GENCODE experimental pipeline
ENST00000512153.5	alternative 5' UTR
ENST00000513274.5	alternative 5' UTR
ENST00000653359.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662234.1	Assembled from SLRseq reads (SRP049776)
ENST00000658348.1	Assembled from SLRseq reads (SRP049776)
ENST00000504670.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660194.1	Assembled from SLRseq reads (SRP049776)
ENST00000655667.1	Assembled from SLRseq reads (SRP049776)
ENST00000661884.1	Assembled from SLRseq reads (SRP049776)
ENST00000659546.1	Assembled from SLRseq reads (SRP049776)
ENST00000664165.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670558.1	Assembled from RACEseq reads
ENST00000664086.1	Assembled from RACEseq reads
ENST00000232217.6	MANE_select
ENST00000511956.1	alternative 5' UTR
ENST00000506825.1	alternative 5' UTR
ENST00000672186.1	NP_002890.2
ENST00000619087.4	CAGE supported TSS
ENST00000492918.1	NP_001124464
ENST00000643695.2	MANE_select
ENST00000509291.5	alternative 5' UTR
ENST00000514703.5	GENCODE experimental pipeline
ENST00000505779.5	GENCODE experimental pipeline
ENST00000563865.1	confirm experimentally
ENST00000458420.7	MANE_select
ENST00000483759.2	GENCODE experimental pipeline
ENST00000286349.4	MANE_select
ENST00000324194.12	MANE_select
ENST00000648615.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000513887.5	GENCODE experimental pipeline
ENST00000310546.3	MANE_select
ENST00000508828.1	GENCODE experimental pipeline
ENST00000507895.1	GENCODE experimental pipeline
ENST00000512277.1	GENCODE experimental pipeline
ENST00000505013.5	alternative 5' UTR
ENST00000286353.9	MANE_select
ENST00000393010.6	alternative 5' UTR
ENST00000514680.5	alternative 5' UTR
ENST00000512457.5	alternative 5' UTR
ENST00000504264.5	GENCODE experimental pipeline
ENST00000508812.1	GENCODE experimental pipeline
ENST00000514263.2	GENCODE experimental pipeline
ENST00000663611.1	Assembled from SLRseq reads (SRP049776)
ENST00000509842.5	alternative 5' UTR
ENST00000507722.5	alternative 5' UTR
ENST00000503809.5	alternative 5' UTR
ENST00000513258.5	alternative 5' UTR
ENST00000509883.5	alternative 5' UTR
ENST00000510338.5	alternative 5' UTR
ENST00000504673.5	alternative 5' UTR
ENST00000513570.1	alternative 5' UTR
ENST00000441582.2	alternative 5' UTR
ENST00000510726.1	alternative 5' UTR
ENST00000509813.1	alternative 5' UTR
ENST00000512769.1	GENCODE experimental pipeline
ENST00000286364.9	MANE_select
ENST00000393000.3	NP_899060.1
ENST00000273480.4	MANE_select
ENST00000648835.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000667378.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000286371.8	MANE_select
ENST00000492725.1	GENCODE experimental pipeline
ENST00000489671.6	MANE_select
ENST00000486111.5	alternative 5' UTR
ENST00000467667.5	alternative 5' UTR
ENST00000497579.5	alternative 5' UTR
ENST00000488107.6	QC splicing correct
ENST00000488107.6	alternative 5' UTR
ENST00000475734.5	alternative 5' UTR
ENST00000494358.5	alternative 5' UTR
ENST00000467634.1	alternative 5' UTR
ENST00000392993.7	MANE_select
ENST00000466685.7	NMD likely if extended
ENST00000392981.7	MANE_select
ENST00000350721.9	MANE_select
ENST00000661310.1	NP_001341508.1
ENST00000457734.7	MANE_select
ENST00000483373.5	alternative 5' UTR
ENST00000475296.5	alternative 5' UTR
ENST00000495744.5	alternative 5' UTR
ENST00000461644.5	alternative 5' UTR
ENST00000464320.5	alternative 5' UTR
ENST00000337777.7	alternative 5' UTR
ENST00000497199.5	alternative 5' UTR
ENST00000497002.1	alternative 5' UTR
ENST00000485338.1	GENCODE experimental pipeline
ENST00000664914.1	Assembled from SLRseq reads (SRP049776)
ENST00000476941.6	MANE_select
ENST00000470310.5	alternative 3' UTR
ENST00000295992.8	MANE_select
ENST00000648195.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000485766.1	GENCODE experimental pipeline
ENST00000658594.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663511.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662125.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671570.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668368.1	Assembled from RACEseq reads
ENST00000654729.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665496.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670740.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669437.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668430.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657885.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664203.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655467.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658642.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656965.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661944.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655382.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659017.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666651.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000340634.6	MANE_select
ENST00000607937.1	nested 454 RNA-Seq supported
ENST00000493782.5	alternative 5' UTR
ENST00000473835.7	MANE_select
ENST00000467348.1	GENCODE experimental pipeline
ENST00000309575.5	MANE_select
ENST00000483262.1	CAGE supported TSS
ENST00000483262.1	GENCODE experimental pipeline
ENST00000316549.11	MANE_select
ENST00000491347.1	GENCODE experimental pipeline
ENST00000315691.8	MANE_select
ENST00000491798.1	QC splicing correct
ENST00000492452.2	GENCODE experimental pipeline
ENST00000441925.2	GENCODE experimental pipeline
ENST00000482351.1	GENCODE experimental pipeline
ENST00000480247.1	QC splicing correct
ENST00000494745.2	QC splicing correct
ENST00000282903.10	MANE_select
ENST00000354952.7	MANE_select
ENST00000446574.6	alternative 5' UTR
ENST00000493382.5	alternative 5' UTR
ENST00000460350.5	alternative 5' UTR
ENST00000476202.5	alternative 5' UTR
ENST00000481701.5	alternative 5' UTR
ENST00000498625.1	alternative 5' UTR
ENST00000497985.5	GENCODE experimental pipeline
ENST00000489015.1	alternative 5' UTR
ENST00000342435.9	MANE_select
ENST00000484560.1	GENCODE experimental pipeline
ENST00000486631.5	alternative 5' UTR
ENST00000472349.1	alternative 5' UTR
ENST00000477974.1	GENCODE experimental pipeline
ENST00000443512.2	MANE_select
ENST00000443512.2	alternative 3' UTR
ENST00000473817.1	GENCODE experimental pipeline
ENST00000670466.1	Assembled from SLRseq reads (SRP049776)
ENST00000659452.1	Assembled from SLRseq reads (SRP049776)
ENST00000470860.2	Assembled from SLRseq reads (SRP049776)
ENST00000658020.1	Assembled from SLRseq reads (SRP049776)
ENST00000383075.8	MANE_select
ENST00000484399.5	alternative 5' UTR
ENST00000473123.5	alternative 5' UTR
ENST00000491672.5	GENCODE experimental pipeline
ENST00000462748.6	alternative 5' UTR
ENST00000484586.5	alternative 5' UTR
ENST00000463250.1	alternative 5' UTR
ENST00000462168.1	GENCODE experimental pipeline
ENST00000462168.1	QC splicing correct
ENST00000282928.5	MANE_select
ENST00000474034.1	GENCODE experimental pipeline
ENST00000481840.1	GENCODE experimental pipeline
ENST00000668118.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660706.1	Assembled from SLRseq reads (SRP049776)
ENST00000658276.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667694.1	Assembled from SLRseq reads (SRP049776)
ENST00000662690.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649594.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000660712.1	Assembled from SLRseq reads (SRP049776)
ENST00000660174.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655212.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658346.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656355.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668651.1	Assembled from SLRseq reads (SRP049776)
ENST00000650594.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000662134.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000460324.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665545.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663786.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663786.1	GENCODE experimental pipeline
ENST00000661886.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668285.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671193.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654242.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658698.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664156.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655836.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000469812.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655240.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655891.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648979.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000497524.5	alternative 5' UTR
ENST00000418473.7	alternative 5' UTR
ENST00000418473.7	upstream ATG
ENST00000349243.8	MANE_select
ENST00000404754.2	alternative 5' UTR
ENST00000474935.5	alternative 5' UTR
ENST00000475347.5	alternative 5' UTR
ENST00000461609.1	QC splicing correct
ENST00000461609.1	alternative 5' UTR
ENST00000402260.2	alternative 5' UTR
ENST00000402260.2	upstream ATG
ENST00000494888.5	alternative 5' UTR
ENST00000462345.5	alternative 5' UTR
ENST00000282957.9	MANE_select
ENST00000282957.9	genebuild_only_MANE
ENST00000498639.1	GENCODE experimental pipeline
ENST00000296046.4	MANE_select
ENST00000666418.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000345003.9	CAGE supported TSS
ENST00000345003.9	MANE_select
ENST00000461191.1	GENCODE experimental pipeline
ENST00000473005.1	alternative 5' UTR
ENST00000479119.1	GENCODE experimental pipeline
ENST00000310053.10	MANE_select
ENST00000310053.10	alternative 3' UTR
ENST00000392912.6	alternative 3' UTR
ENST00000296051.7	MANE_select
ENST00000479771.5	GENCODE experimental pipeline
ENST00000264613.11	MANE_select
ENST00000455472.3	GENCODE experimental pipeline
ENST00000663884.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000461341.2	transcribed_unitary_pseudogene
ENST00000296059.7	MANE_select
ENST00000470080.5	alternative 5' UTR
ENST00000474754.1	alternative 5' UTR
ENST00000305366.8	MANE_select
ENST00000496491.1	GENCODE experimental pipeline
ENST00000484046.1	GENCODE experimental pipeline
ENST00000665408.1	Assembled from RACEseq reads
ENST00000305354.5	MANE_select
ENST00000465758.1	GENCODE experimental pipeline
ENST00000360632.8	MANE_select
ENST00000360632.8	alternative 5' UTR
ENST00000467467.5	Genoscope mRNA only
ENST00000467467.5	alternative 5' UTR
ENST00000472417.1	GENCODE experimental pipeline
ENST00000479238.1	alternative 5' UTR
ENST00000485352.1	alternative 5' UTR
ENST00000475579.1	alternative 5' UTR
ENST00000460517.1	alternative 5' UTR
ENST00000663001.1	Assembled from SLRseq reads (SRP049776)
ENST00000473414.6	MANE_select
ENST00000446160.7	MANE_select
ENST00000484019.1	GENCODE experimental pipeline
ENST00000474224.1	GENCODE experimental pipeline
ENST00000462561.1	GENCODE experimental pipeline
ENST00000497728.1	GENCODE experimental pipeline
ENST00000473672.1	GENCODE experimental pipeline
ENST00000344229.7	alternative 5' UTR
ENST00000470151.5	alternative 5' UTR
ENST00000466478.5	alternative 5' UTR
ENST00000491086.5	alternative 5' UTR
ENST00000467977.5	alternative 5' UTR
ENST00000392894.8	MANE_select
ENST00000468648.5	alternative 5' UTR
ENST00000459632.5	alternative 5' UTR
ENST00000466795.5	alternative 5' UTR
ENST00000482083.7	QC splicing correct
ENST00000482083.7	alternative 5' UTR
ENST00000649949.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000423691.2	GENCODE experimental pipeline
ENST00000494827.5	alternative 5' UTR
ENST00000497060.1	QC splicing correct
ENST00000490975.1	GENCODE experimental pipeline
ENST00000497148.5	alternative 5' UTR
ENST00000475518.5	alternative 5' UTR
ENST00000481275.5	alternative 5' UTR
ENST00000498307.5	alternative 5' UTR
ENST00000472821.5	GENCODE experimental pipeline
ENST00000489690.1	GENCODE experimental pipeline
ENST00000662289.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665197.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664180.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665600.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000471222.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000471222.3	QC splicing correct
ENST00000670456.1	Assembled from SLRseq reads (SRP049776)
ENST00000239944.7	MANE_select
ENST00000239944.7	genebuild_only_MANE
ENST00000487153.1	GENCODE experimental pipeline
ENST00000491195.1	GENCODE experimental pipeline
ENST00000484608.2	GENCODE experimental pipeline
ENST00000487799.5	GENCODE experimental pipeline
ENST00000460851.6	MANE_select
ENST00000465535.1	GENCODE experimental pipeline
ENST00000480740.5	GENCODE experimental pipeline
ENST00000477889.5	GENCODE experimental pipeline
ENST00000477889.5	alternative 5' UTR
ENST00000471696.6	MANE_select
ENST00000485923.1	GENCODE experimental pipeline
ENST00000485923.1	alternative 5' UTR
ENST00000295910.11	MANE_select
ENST00000475393.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655051.1	Assembled from SLRseq reads (SRP049776)
ENST00000670089.1	Assembled from SLRseq reads (SRP049776)
ENST00000654592.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000659411.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669560.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000312960.4	MANE_select
ENST00000482706.1	GENCODE experimental pipeline
ENST00000663257.1	Assembled from SLRseq reads (SRP049776)
ENST00000465419.7	MANE_select
ENST00000474598.1	GENCODE experimental pipeline
ENST00000327047.6	CAGE supported TSS
ENST00000327047.6	MANE_select
ENST00000488092.1	GENCODE experimental pipeline
ENST00000309180.6	MANE_select
ENST00000480322.1	alternative 5' UTR
ENST00000309170.8	MANE_select
ENST00000424796.6	alternative 5' UTR
ENST00000494668.1	alternative 5' UTR
ENST00000666451.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000260843.5	MANE_select
ENST00000325602.6	MANE_select
ENST00000302632.4	MANE_select
ENST00000497472.1	GENCODE experimental pipeline
ENST00000492731.1	GENCODE experimental pipeline
ENST00000356517.4	MANE_select
ENST00000471766.1	GENCODE experimental pipeline
ENST00000463420.1	GENCODE experimental pipeline
ENST00000232892.12	MANE_select
ENST00000362032.6	MANE_select
ENST00000461436.1	GENCODE experimental pipeline
ENST00000324210.9	NP_066368.2
ENST00000460591.5	alternative 5' UTR
ENST00000492948.5	NP_997180.1
ENST00000485509.5	NP_997179.1
ENST00000669594.1	Assembled from SLRseq reads (SRP049776)
ENST00000665663.1	Assembled from SLRseq reads (SRP049776)
ENST00000496084.1	GENCODE experimental pipeline
ENST00000659139.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000305097.6	MANE_select
ENST00000487827.1	GENCODE experimental pipeline
ENST00000323534.5	MANE_select
ENST00000498457.1	GENCODE experimental pipeline
ENST00000462300.1	GENCODE experimental pipeline
ENST00000462835.1	GENCODE experimental pipeline
ENST00000648073.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000491862.6	Assembled from SLRseq reads (SRP049776)
ENST00000479270.6	Assembled from SLRseq reads (SRP049776)
ENST00000480639.6	Assembled from SLRseq reads (SRP049776)
ENST00000664850.1	Assembled from SLRseq reads (SRP049776)
ENST00000657639.1	Assembled from SLRseq reads (SRP049776)
ENST00000657305.1	Assembled from SLRseq reads (SRP049776)
ENST00000467912.6	Assembled from SLRseq reads (SRP049776)
ENST00000610221.1	nested 454 RNA-Seq supported
ENST00000660955.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659466.1	Assembled from SLRseq reads (SRP049776)
ENST00000465093.6	MANE_select
ENST00000465093.6	alternative 5' UTR
ENST00000496811.6	MANE_select
ENST00000481941.5	GENCODE experimental pipeline
ENST00000469977.1	GENCODE experimental pipeline
ENST00000389740.3	MANE_select
ENST00000492661.5	CAGE supported TSS
ENST00000492661.5	alternative 5' UTR
ENST00000460393.6	CAGE supported TSS
ENST00000615825.2	alternative 5' UTR
ENST00000675418.2	align_id:3690635|asmbl_180800
ENST00000462745.5	align_id:3690636|asmbl_180801
ENST00000462745.5	alternative 5' UTR
ENST00000493237.5	alternative 5' UTR
ENST00000360490.7	CAGE supported TSS
ENST00000360490.7	MANE_select
ENST00000360490.7	alternative 5' UTR
ENST00000491026.6	alternative 5' UTR
ENST00000473730.6	alternative 5' UTR
ENST00000680057.1	CAGE supported TSS
ENST00000680057.1	alternative 5' UTR
ENST00000680282.1	CAGE supported TSS
ENST00000680282.1	alternative 5' UTR
ENST00000679362.1	align_id:1348615|asmbl_68518
ENST00000477669.1	GENCODE experimental pipeline
ENST00000658401.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000490497.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655378.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669141.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665154.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000489090.2	GENCODE experimental pipeline
ENST00000489090.2	MANE_select
ENST00000460012.7	MANE_select
ENST00000475196.1	GENCODE experimental pipeline
ENST00000472913.1	GENCODE experimental pipeline
ENST00000340171.7	MANE_select
ENST00000465810.1	not organism-supported
ENST00000643144.2	LR annotation
ENST00000643144.2	MANE_select
ENST00000643144.2	alternative 3' UTR
ENST00000475842.5	GENCODE experimental pipeline
ENST00000496772.1	GENCODE experimental pipeline
ENST00000460729.1	GENCODE experimental pipeline
ENST00000653103.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000496455.7	MANE_select
ENST00000663782.1	Assembled from RACEseq reads
ENST00000490337.6	MANE_select
ENST00000661961.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000265044.7	MANE_select
ENST00000467789.5	GENCODE experimental pipeline
ENST00000476217.5	GENCODE experimental pipeline
ENST00000496050.1	GENCODE experimental pipeline
ENST00000496050.1	alternative 5' UTR
ENST00000664429.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000463449.1	GENCODE experimental pipeline
ENST00000486483.5	alternative 5' UTR
ENST00000295924.12	MANE_select
ENST00000461166.5	alternative 5' UTR
ENST00000473702.5	alternative 5' UTR
ENST00000481853.5	alternative 5' UTR
ENST00000664482.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654528.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000488584.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000488584.2	Assembled from SLRseq reads (SRP049776)
ENST00000465728.5	QC splicing correct
ENST00000491763.1	alternative 5' UTR
ENST00000659739.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661446.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661446.1	GENCODE experimental pipeline
ENST00000653334.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000469196.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657118.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668918.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654643.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665035.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658205.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657628.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662778.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662247.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659992.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660101.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660509.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665841.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654705.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654705.1	GENCODE experimental pipeline
ENST00000660852.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666301.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000471719.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000474477.5	GENCODE experimental pipeline
ENST00000670208.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663887.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654835.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665438.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000295926.8	MANE_select
ENST00000480817.1	GENCODE experimental pipeline
ENST00000667900.1	Assembled from SLRseq reads (SRP049776)
ENST00000654819.1	Assembled from SLRseq reads (SRP049776)
ENST00000668714.1	Assembled from SLRseq reads (SRP049776)
ENST00000494885.2	Assembled from SLRseq reads (SRP049776)
ENST00000657907.1	Assembled from RACEseq reads
ENST00000362010.7	MANE_select
ENST00000392832.6	alternative 5' UTR
ENST00000494677.5	alternative 5' UTR
ENST00000490235.5	GENCODE experimental pipeline
ENST00000487753.5	alternative 5' UTR
ENST00000461299.5	alternative 5' UTR
ENST00000489602.1	alternative 5' UTR
ENST00000295927.4	MANE_select
ENST00000468043.5	GENCODE experimental pipeline
ENST00000650979.1	GENCODE experimental pipeline
ENST00000670759.1	Assembled from SLRseq reads (SRP049776)
ENST00000651134.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000491909.1	GENCODE experimental pipeline
ENST00000483851.7	MANE_select
ENST00000480820.5	alternative 5' UTR
ENST00000494002.5	alternative 5' UTR
ENST00000471994.5	alternative 5' UTR
ENST00000464171.5	non-organsim_supported
ENST00000611884.5	MANE_select
ENST00000611884.5	genebuild_only_MANE
ENST00000312179.10	alternative 5' UTR
ENST00000476899.5	alternative 5' UTR
ENST00000475981.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667491.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662951.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658486.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000484955.5	alternative 5' UTR
ENST00000355893.11	LR annotation
ENST00000466246.7	MANE_select
ENST00000482628.5	alternative 5' UTR
ENST00000478894.7	GENCODE experimental pipeline
ENST00000478894.7	alternative 5' UTR
ENST00000651874.1	alternative 5' UTR
ENST00000486715.6	MANE_select
ENST00000478254.5	Genoscope mRNA only
ENST00000464732.1	GENCODE experimental pipeline
ENST00000264265.4	MANE_select
ENST00000237696.10	MANE_select
ENST00000462663.5	GENCODE experimental pipeline
ENST00000498640.1	NMD likely if extended
ENST00000415822.8	MANE_select
ENST00000264266.12	CAGE supported TSS
ENST00000477743.1	GENCODE experimental pipeline
ENST00000668475.1	Assembled from SLRseq reads (SRP049776)
ENST00000477589.6	Assembled from SLRseq reads (SRP049776)
ENST00000496842.1	GENCODE experimental pipeline
ENST00000640015.1	GENCODE experimental pipeline
ENST00000640565.1	alternative 5' UTR
ENST00000460298.3	GENCODE experimental pipeline
ENST00000639448.1	alternative 5' UTR
ENST00000397832.7	MANE_select
ENST00000657094.1	Assembled from SLRseq reads (SRP049776)
ENST00000460574.1	GENCODE experimental pipeline
ENST00000483730.1	GENCODE experimental pipeline
ENST00000666425.1	Assembled from SLRseq reads (SRP049776)
ENST00000656481.1	Assembled from SLRseq reads (SRP049776)
ENST00000654530.1	Assembled from SLRseq reads (SRP049776)
ENST00000661085.1	Assembled from SLRseq reads (SRP049776)
ENST00000662594.1	Assembled from SLRseq reads (SRP049776)
ENST00000659957.1	Assembled from SLRseq reads (SRP049776)
ENST00000663549.1	Assembled from SLRseq reads (SRP049776)
ENST00000671614.1	Assembled from SLRseq reads (SRP049776)
ENST00000664175.1	Assembled from SLRseq reads (SRP049776)
ENST00000660728.1	Assembled from SLRseq reads (SRP049776)
ENST00000305579.7	MANE_select
ENST00000471921.2	GENCODE experimental pipeline
ENST00000471921.2	QC splicing correct
ENST00000326474.5	MANE_select
ENST00000326448.12	MANE_select
ENST00000483465.5	alternative 5' UTR
ENST00000483325.1	GENCODE experimental pipeline
ENST00000465537.5	alternative 5' UTR
ENST00000475677.5	alternative 5' UTR
ENST00000498409.5	alternative 5' UTR
ENST00000468218.5	alternative 5' UTR
ENST00000486856.5	alternative 5' UTR
ENST00000478370.5	alternative 5' UTR
ENST00000489004.5	alternative 5' UTR
ENST00000478536.1	alternative 5' UTR
ENST00000465903.5	alternative 5' UTR
ENST00000485645.5	alternative 5' UTR
ENST00000357388.8	MANE_select
ENST00000489573.5	alternative 5' UTR
ENST00000490207.5	alternative 5' UTR
ENST00000485867.5	GENCODE experimental pipeline
ENST00000344722.5	alternative 5' UTR
ENST00000309784.9	MANE_select
ENST00000479460.5	alternative 5' UTR
ENST00000471396.1	alternative 5' UTR
ENST00000471155.5	alternative 5' UTR
ENST00000494486.1	alternative 5' UTR
ENST00000334256.9	MANE_select
ENST00000469804.1	GENCODE experimental pipeline
ENST00000320767.4	MANE_select
ENST00000498165.6	MANE_select
ENST00000320474.10	MANE_select
ENST00000320474.10	alternative 5' UTR
ENST00000392781.7	alternative 5' UTR
ENST00000650695.1	alternative 5' UTR
ENST00000651801.1	alternative 5' UTR
ENST00000651379.1	alternative 5' UTR
ENST00000651379.1	upstream ATG
ENST00000652111.1	alternative 5' UTR
ENST00000651460.1	alternative 5' UTR
ENST00000651686.1	alternative 5' UTR
ENST00000651972.1	alternative 5' UTR
ENST00000651953.1	alternative 5' UTR
ENST00000651292.1	alternative 5' UTR
ENST00000651380.1	alternative 5' UTR
ENST00000651689.1	alternative 5' UTR
ENST00000652059.1	NAGNAG splice site
ENST00000652059.1	alternative 5' UTR
ENST00000652730.1	alternative 5' UTR
ENST00000651791.1	NAGNAG splice site
ENST00000651791.1	alternative 5' UTR
ENST00000651117.1	alternative 5' UTR
ENST00000651254.1	alternative 5' UTR
ENST00000651178.1	alternative 5' UTR
ENST00000651916.1	alternative 5' UTR
ENST00000652377.1	alternative 5' UTR
ENST00000652143.1	alternative 5' UTR
ENST00000650733.1	alternative 5' UTR
ENST00000473285.5	alternative 5' UTR
ENST00000651509.1	alternative 5' UTR
ENST00000651305.1	alternative 5' UTR
ENST00000652669.1	alternative 5' UTR
ENST00000652596.1	alternative 5' UTR
ENST00000651147.1	alternative 5' UTR
ENST00000494818.6	alternative 5' UTR
ENST00000494173.7	alternative 5' UTR
ENST00000652032.1	alternative 5' UTR
ENST00000488170.5	alternative 5' UTR
ENST00000652309.1	alternative 5' UTR
ENST00000468268.5	alternative 5' UTR
ENST00000492353.5	alternative 5' UTR
ENST00000473142.5	alternative 5' UTR
ENST00000498216.5	alternative 5' UTR
ENST00000484127.5	alternative 5' UTR
ENST00000460353.2	NAGNAG splice site
ENST00000460353.2	upstream ATG
ENST00000468606.5	alternative 5' UTR
ENST00000460503.5	alternative 5' UTR
ENST00000493066.5	alternative 5' UTR
ENST00000351193.7	MANE_select
ENST00000463518.5	alternative 5' UTR
ENST00000476237.5	alternative 5' UTR
ENST00000460469.1	alternative 5' UTR
ENST00000497137.1	alternative 5' UTR
ENST00000327928.4	MANE_select
ENST00000665274.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000497285.1	GENCODE experimental pipeline
ENST00000660789.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663627.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665928.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668425.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665626.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655228.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657422.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661702.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654609.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659266.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664909.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658280.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670655.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666234.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668405.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661439.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662504.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657261.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000488287.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659031.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670024.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663767.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666364.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666445.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655980.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670179.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664365.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667576.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662097.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656322.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667319.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655584.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000494897.5	QC splicing correct
ENST00000655806.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659789.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660784.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000492553.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662016.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662054.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664163.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000474168.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658030.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654755.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654755.1	Assembled from RACEseq reads
ENST00000488173.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653088.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659796.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655719.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656281.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000493473.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671181.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658150.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000463978.1	GENCODE experimental pipeline
ENST00000497379.2	GENCODE experimental pipeline
ENST00000497379.2	QC splicing correct
ENST00000264382.8	MANE_select
ENST00000475390.2	MANE_select
ENST00000475390.2	alternative 5' UTR
ENST00000497724.1	alternative 5' UTR
ENST00000665369.1	Assembled from SLRseq reads (SRP049776)
ENST00000670998.1	Assembled from SLRseq reads (SRP049776)
ENST00000653967.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670463.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653864.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655586.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664927.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661151.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653747.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654261.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670403.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670403.1	Assembled from SLRseq reads (SRP049776)
ENST00000666398.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654990.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670338.1	Assembled from SLRseq reads (SRP049776)
ENST00000498616.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668542.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660780.1	Assembled from SLRseq reads (SRP049776)
ENST00000656293.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653773.1	Assembled from SLRseq reads (SRP049776)
ENST00000494915.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670918.1	Assembled from SLRseq reads (SRP049776)
ENST00000670150.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659430.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665240.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652830.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666522.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664292.1	Assembled from SLRseq reads (SRP049776)
ENST00000663897.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654069.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669761.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661555.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661419.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654580.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657326.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000651449.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000264381.8	MANE_select
ENST00000488954.1	GENCODE experimental pipeline
ENST00000675490.1	MANE_select
ENST00000492642.5	QC splicing correct
ENST00000474464.5	alternative 5' UTR
ENST00000485651.5	GENCODE experimental pipeline
ENST00000476257.5	alternative 5' UTR
ENST00000471111.5	alternative 5' UTR
ENST00000466903.1	alternative 5' UTR
ENST00000467583.1	GENCODE experimental pipeline
ENST00000493061.1	GENCODE experimental pipeline
ENST00000460448.5	QC splicing correct
ENST00000471198.1	NMD likely if extended
ENST00000392750.7	MANE_select
ENST00000473645.6	alternative 5' UTR
ENST00000461494.5	alternative 5' UTR
ENST00000470131.5	alternative 5' UTR
ENST00000475915.6	alternative 5' UTR
ENST00000487947.6	QC splicing correct
ENST00000462725.6	alternative 5' UTR
ENST00000492139.5	alternative 5' UTR
ENST00000464360.5	alternative 5' UTR
ENST00000472941.5	alternative 5' UTR
ENST00000446050.7	MANE_select
ENST00000446050.7	alternative 5' UTR
ENST00000472747.2	alternative 5' UTR
ENST00000661269.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000493529.6	GENCODE experimental pipeline
ENST00000658005.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651627.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000653499.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000470487.6	MANE_select
ENST00000652838.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000431685.2	C3orf50
ENST00000664865.1	Assembled from SLRseq reads (SRP049776)
ENST00000650951.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000651503.2	MANE_select
ENST00000472280.5	GENCODE experimental pipeline
ENST00000472280.5	alternative 5' UTR
ENST00000492586.1	GENCODE experimental pipeline
ENST00000460890.5	alternative 5' UTR
ENST00000487503.5	QC splicing correct
ENST00000487503.5	alternative 5' UTR
ENST00000494597.5	QC splicing correct
ENST00000494597.5	alternative 5' UTR
ENST00000475754.5	alternative 5' UTR
ENST00000481315.1	alternative 5' UTR
ENST00000466623.1	alternative 5' UTR
ENST00000486748.2	QC splicing correct
ENST00000469794.1	GENCODE experimental pipeline
ENST00000330368.3	MANE_select
ENST00000349841.10	MANE_select
ENST00000356716.8	alternative 5' UTR
ENST00000446859.7	MANE_select
ENST00000316428.10	MANE_select
ENST00000335556.7	MANE_select
ENST00000335556.7	alternative 5' UTR
ENST00000487580.1	GENCODE experimental pipeline
ENST00000461933.1	GENCODE experimental pipeline
ENST00000337002.9	MANE_select
ENST00000480708.5	alternative 3' UTR
ENST00000355897.10	MANE_select
ENST00000492492.5	alternative 5' UTR
ENST00000482813.5	GENCODE experimental pipeline
ENST00000491740.1	GENCODE experimental pipeline
ENST00000476668.1	GENCODE experimental pipeline
ENST00000482710.1	alternative 5' UTR
ENST00000473675.1	alternative 5' UTR
ENST00000484068.5	alternative 3' UTR
ENST00000495893.7	MANE_select
ENST00000495893.7	alternative 5' UTR
ENST00000475729.5	alternative 5' UTR
ENST00000295797.5	MANE_select
ENST00000476188.5	alternative 5' UTR
ENST00000259119.9	MANE_select
ENST00000259119.9	alternative 5' UTR
ENST00000490989.1	GENCODE experimental pipeline
ENST00000064724.8	CAGE supported TSS
ENST00000064724.8	MANE_select
ENST00000489485.5	CAGE supported TSS
ENST00000643053.1	CAGE supported TSS
ENST00000468358.5	CAGE supported TSS
ENST00000477531.3	CAGE supported TSS
ENST00000486975.1	CAGE supported TSS
ENST00000471373.5	CAGE supported TSS
ENST00000643719.1	CAGE supported TSS
ENST00000663245.1	Assembled from SLRseq reads (SRP049776)
ENST00000644993.1	CAGE supported TSS
ENST00000480067.1	CAGE supported TSS
ENST00000661313.1	Assembled from SLRseq reads (SRP049776)
ENST00000231706.6	MANE_select
ENST00000466168.1	GENCODE experimental pipeline
ENST00000658869.1	Assembled from SLRseq reads (SRP049776)
ENST00000660477.1	Assembled from SLRseq reads (SRP049776)
ENST00000663709.1	Assembled from SLRseq reads (SRP049776)
ENST00000295830.13	MANE_select
ENST00000295822.7	MANE_select
ENST00000655926.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000314251.8	MANE_select
ENST00000436636.7	MANE_select
ENST00000464785.1	QC splicing correct
ENST00000468757.1	GENCODE experimental pipeline
ENST00000465393.1	GENCODE experimental pipeline
ENST00000657847.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665680.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420943.1	NP_536845
ENST00000351298.9	MANE_select
ENST00000463281.1	GENCODE experimental pipeline
ENST00000465816.6	QC splicing correct
ENST00000418087.1	alternative 5' UTR
ENST00000449106.2	Assembled from SLRseq reads (SRP049776)
ENST00000334567.9	FLJ23172
ENST00000334567.9	MANE_select
ENST00000450693.1	alternative 3' UTR
ENST00000456146.1	GENCODE experimental pipeline
ENST00000670364.1	Assembled from SLRseq reads (SRP049776)
ENST00000653722.1	Assembled from SLRseq reads (SRP049776)
ENST00000415807.7	MANE_select
ENST00000415807.7	alternative 5' UTR
ENST00000423424.5	alternative 5' UTR
ENST00000416957.5	alternative 5' UTR
ENST00000241256.3	MANE_select
ENST00000241261.7	MANE_select
ENST00000475381.7	MANE_select
ENST00000475381.7	NP_065843.3
ENST00000424772.2	GENCODE experimental pipeline
ENST00000663800.1	Assembled from SLRseq reads (SRP049776)
ENST00000232458.9	Human Swiss-Prot isoform Q9H8V3-1.3
ENST00000392692.8	MANE_select
ENST00000428567.5	alternative 5' UTR
ENST00000366090.6	alternative 5' UTR
ENST00000426894.5	alternative 5' UTR
ENST00000366254.2	QC splicing correct
ENST00000366254.2	alternative 5' UTR
ENST00000415665.5	alternative 5' UTR
ENST00000438041.5	alternative 5' UTR
ENST00000441497.6	alternative 5' UTR
ENST00000444250.1	GENCODE experimental pipeline
ENST00000351008.4	CAGE supported TSS
ENST00000351008.4	LR annotation
ENST00000351008.4	MANE_select
ENST00000671016.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000423427.1	alternative 5' UTR
ENST00000413821.1	alternative 5' UTR
ENST00000361589.8	alternative 5' UTR
ENST00000457192.1	GENCODE experimental pipeline
ENST00000454872.6	MANE_select
ENST00000666835.1	Assembled from SLRseq reads (SRP049776)
ENST00000426315.1	GENCODE experimental pipeline
ENST00000652470.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000657476.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657476.1	GENCODE experimental pipeline
ENST00000421034.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651920.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000457928.7	MANE_select
ENST00000457928.7	alternative 5' UTR
ENST00000673974.1	alternative 5' UTR
ENST00000352800.10	alternative 5' UTR
ENST00000422442.6	alternative 5' UTR
ENST00000424913.5	alternative 5' UTR
ENST00000437738.5	alternative 5' UTR
ENST00000431421.5	alternative 5' UTR
ENST00000635794.1	alternative 5' UTR
ENST00000450267.5	alternative 5' UTR
ENST00000630833.2	alternative 5' UTR
ENST00000431674.5	alternative 5' UTR
ENST00000422066.5	alternative 5' UTR
ENST00000443315.5	alternative 5' UTR
ENST00000427349.5	alternative 5' UTR
ENST00000413084.5	alternative 5' UTR
ENST00000454723.2	GENCODE experimental pipeline
ENST00000657906.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000442937.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656037.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661409.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671331.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665837.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661450.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445673.1	GENCODE experimental pipeline
ENST00000660801.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668730.1	Assembled from SLRseq reads (SRP049776)
ENST00000456755.1	GENCODE experimental pipeline
ENST00000668196.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000654164.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000434309.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660040.1	Assembled from SLRseq reads (SRP049776)
ENST00000666168.1	Assembled from SLRseq reads (SRP049776)
ENST00000651726.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000655507.1	Assembled from SLRseq reads (SRP049776)
ENST00000651749.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000414475.1	GENCODE experimental pipeline
ENST00000663946.1	Assembled from SLRseq reads (SRP049776)
ENST00000656199.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659038.1	Assembled from SLRseq reads (SRP049776)
ENST00000418585.2	Assembled from SLRseq reads (SRP049776)
ENST00000657443.1	Assembled from SLRseq reads (SRP049776)
ENST00000437510.5	alternative 5' UTR
ENST00000420517.6	alternative 5' UTR
ENST00000452583.6	MANE_select
ENST00000432997.5	alternative 5' UTR
ENST00000455865.5	alternative 5' UTR
ENST00000436247.1	GENCODE experimental pipeline
ENST00000436432.1	GENCODE experimental pipeline
ENST00000668466.1	Assembled from SLRseq reads (SRP049776)
ENST00000652290.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000311417.7	MANE_select
ENST00000432729.5	alternative 5' UTR
ENST00000414084.1	alternative 5' UTR
ENST00000477735.1	alternative 5' UTR
ENST00000263967.4	MANE_select
ENST00000468036.1	alternative 5' UTR
ENST00000349697.2	AF204159.1
ENST00000496856.6	MANE_select
ENST00000496856.6	alternative 5' UTR
ENST00000491818.5	alternative 5' UTR
ENST00000481587.5	alternative 5' UTR
ENST00000466264.5	alternative 5' UTR
ENST00000484866.5	alternative 5' UTR
ENST00000494234.5	alternative 5' UTR
ENST00000471841.6	MANE_select
ENST00000467174.6	alternative 5' UTR
ENST00000263969.9	alternative 5' UTR
ENST00000489329.5	GENCODE experimental pipeline
ENST00000232564.8	MANE_select
ENST00000676128.1	alternative 5' UTR
ENST00000466899.6	GENCODE experimental pipeline
ENST00000674862.1	alternative 5' UTR
ENST00000497513.1	alternative 5' UTR
ENST00000600539.1	QC splicing correct
ENST00000598857.1	non canonical other
ENST00000429709.7	MANE_select
ENST00000490364.1	alternative 5' UTR
ENST00000476781.6	MANE_select
ENST00000259037.8	MANE_select
ENST00000482604.5	QC splicing correct
ENST00000680408.1	SLR-seq_HsBN_lib9
ENST00000680408.1	Snaptron_GTEX
ENST00000680408.1	intropolis_filt[ered
ENST00000680692.1	Snaptron_GTEX
ENST00000680692.1	intropolis_filtered
ENST00000680407.1	Snaptron_GTEX
ENST00000680407.1	intropolis_filtered
ENST00000680587.1	CAGE supported TSS
ENST00000680587.1	slrseq_align_id:3692003|asmbl_182168_PASA_cluster_16033
ENST00000681064.1	Snaptron_GTEX
ENST00000681064.1	intropolis_filtered
ENST00000679350.1	Snaptron_GTEX
ENST00000679350.1	intropolis_filtered
ENST00000681051.1	intropolis_filtered
ENST00000263966.8	MANE_select
ENST00000681358.1	intropolis_filtered
ENST00000680008.1	SLR-seq_HsBN_lib7
ENST00000680008.1	Snaptron_GTEX
ENST00000680008.1	intropolis_filtered
ENST00000681561.1	Snaptron_GTEX
ENST00000681561.1	intropolis_filtered
ENST00000680930.1	Snaptron_GTEX
ENST00000681642.1	Snaptron_GTEX
ENST00000681642.1	intropolis_filtered
ENST00000681128.1	Snaptron_GTEX
ENST00000681128.1	intropolis_filtered
ENST00000681299.1	intropolis_filtered
ENST00000680276.1	intropolis_filtered
ENST00000679783.1	Snaptron_GTEX
ENST00000679783.1	intropolis_filtered
ENST00000679694.1	Snaptron_GTEX
ENST00000679694.1	intropolis_filtered
ENST00000680502.1	Snaptron_GTEX
ENST00000680055.1	Snaptron_GTEX
ENST00000680055.1	intropolis_filtered
ENST00000680651.1	Snaptron_GTEX
ENST00000680436.1	Snaptron_GTEX
ENST00000680436.1	intropolis_filtered
ENST00000681356.1	SLR-seq_TB0000035
ENST00000679602.1	Snaptron_GTEX
ENST00000679972.1	SLR-seq_TB0000035
ENST00000681649.1	Snaptron_GTEX
ENST00000681649.1	intropolis_filtered
ENST00000680307.1	Snaptron_GTEX
ENST00000680307.1	intropolis_filtered
ENST00000680031.1	Snaptron_GTEX
ENST00000680031.1	intropolis_filtered
ENST00000680605.1	Snaptron_GTEX
ENST00000680605.1	intropolis_filtered
ENST00000497155.1	QC splicing correct
ENST00000679403.1	intropolis_filtered
ENST00000681533.1	intropolis_filtered
ENST00000681836.1	Snaptron_GTEX
ENST00000681836.1	intropolis_filtered
ENST00000680217.1	Snaptron_GTEX
ENST00000680217.1	intropolis_filtered
ENST00000680853.1	intropolis_filtered
ENST00000679640.1	intropolis_filtered
ENST00000681782.1	Snaptron_GTEX
ENST00000681782.1	intropolis_filtered
ENST00000681560.1	Snaptron_GTEX
ENST00000681560.1	intropolis_filtered
ENST00000680951.1	Snaptron_GTEX
ENST00000680951.1	intropolis_filtered
ENST00000679954.1	Snaptron_GTEX
ENST00000679954.1	intropolis_filtered
ENST00000680167.1	Snaptron_GTEX
ENST00000680167.1	intropolis_filtered
ENST00000679893.1	Snaptron_GTEX
ENST00000679893.1	intropolis_filtered
ENST00000679768.1	Snaptron_GTEX
ENST00000679768.1	intropolis_filtered
ENST00000679660.1	Snaptron_GTEX
ENST00000679660.1	intropolis_filtered
ENST00000680477.1	Snaptron_GTEX
ENST00000680477.1	intropolis_filtered
ENST00000679752.1	SLR-seq_HsBN_lib6
ENST00000681724.1	Snaptron_GTEX
ENST00000681724.1	intropolis_filtered
ENST00000680856.1	Snaptron_GTEX
ENST00000681709.1	Snaptron_GTEX
ENST00000680905.1	Snaptron_GTEX
ENST00000680905.1	intropolis_filtered
ENST00000681098.1	Snaptron_GTEX
ENST00000681098.1	intropolis_filtered
ENST00000681783.1	Snaptron_GTEX
ENST00000681783.1	intropolis_filtered
ENST00000681362.1	Snaptron_GTEX
ENST00000681362.1	intropolis_filtered
ENST00000680843.1	Snaptron_GTEX
ENST00000680843.1	intropolis_filtered
ENST00000679769.1	Snaptron_GTEX
ENST00000679769.1	intropolis_filtered
ENST00000679839.1	Snaptron_GTEX
ENST00000679839.1	intropolis_filtered
ENST00000679407.1	Snaptron_GTEX
ENST00000679407.1	intropolis_filtered
ENST00000681262.1	Snaptron_GTEX
ENST00000681262.1	intropolis_filtered
ENST00000679664.1	intropolis_filtered
ENST00000680567.1	intropolis_filtered
ENST00000680392.1	intropolis_filtered
ENST00000681081.1	intropolis_filtered
ENST00000680549.1	intropolis_filtered
ENST00000679674.1	Snaptron_GTEX
ENST00000679674.1	intropolis_filtered
ENST00000680734.1	Snaptron_GTEX
ENST00000680734.1	alternative 3' UTR
ENST00000680734.1	intropolis_filtered
ENST00000680308.1	Snaptron_GTEX
ENST00000681918.1	Snaptron_GTEX
ENST00000681918.1	alternative 3' UTR
ENST00000681918.1	intropolis_filtered
ENST00000681630.1	Snaptron_GTEX
ENST00000681630.1	alternative 3' UTR
ENST00000681630.1	intropolis_filtered
ENST00000679772.1	Snaptron_GTEX
ENST00000679772.1	intropolis_filtered
ENST00000681736.1	Snaptron_GTEX
ENST00000681736.1	alternative 3' UTR
ENST00000681736.1	intropolis_filtered
ENST00000602704.2	Snaptron_GTEX
ENST00000602704.2	alternative 3' UTR
ENST00000602704.2	intropolis_filtered
ENST00000467460.6	MANE_select
ENST00000496721.5	alternative 5' UTR
ENST00000466064.1	GENCODE experimental pipeline
ENST00000462801.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000462801.2	GENCODE experimental pipeline
ENST00000667923.1	Assembled from SLRseq reads (SRP049776)
ENST00000670709.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000653805.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670884.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668671.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654328.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000472596.1	GENCODE experimental pipeline
ENST00000296015.9	MANE_select
ENST00000495660.1	alternative 5' UTR
ENST00000476379.6	CAGE supported TSS
ENST00000476379.6	LR annotation
ENST00000476379.6	MANE_select
ENST00000650889.1	SLR-seq
ENST00000495357.1	GENCODE experimental pipeline
ENST00000495817.1	CAGE supported TSS
ENST00000469882.5	alternative 5' UTR
ENST00000484790.5	alternative 5' UTR
ENST00000465551.5	alternative 5' UTR
ENST00000357559.9	MANE_select
ENST00000484958.5	alternative 5' UTR
ENST00000382564.8	LR annotation
ENST00000382564.8	MANE_select
ENST00000646965.1	upstream ATG
ENST00000479269.5	alternative 5' UTR
ENST00000660576.1	Assembled from SLRseq reads (SRP049776)
ENST00000643236.2	Assembled from SLRseq reads (SRP049776)
ENST00000646949.2	Assembled from SLRseq reads (SRP049776)
ENST00000643131.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668295.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000645423.2	Assembled from SLRseq reads (SRP049776)
ENST00000665187.1	Assembled from SLRseq reads (SRP049776)
ENST00000656613.1	Assembled from SLRseq reads (SRP049776)
ENST00000654538.1	Assembled from SLRseq reads (SRP049776)
ENST00000665485.1	Assembled from SLRseq reads (SRP049776)
ENST00000646841.2	Assembled from SLRseq reads (SRP049776)
ENST00000671456.1	Assembled from SLRseq reads (SRP049776)
ENST00000670501.1	Assembled from SLRseq reads (SRP049776)
ENST00000491282.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667332.1	Assembled from SLRseq reads (SRP049776)
ENST00000498731.6	Assembled from SLRseq reads (SRP049776)
ENST00000476964.6	Assembled from SLRseq reads (SRP049776)
ENST00000657986.1	Assembled from SLRseq reads (SRP049776)
ENST00000665033.1	Assembled from SLRseq reads (SRP049776)
ENST00000661842.1	Assembled from SLRseq reads (SRP049776)
ENST00000492337.6	Assembled from SLRseq reads (SRP049776)
ENST00000642652.2	Assembled from SLRseq reads (SRP049776)
ENST00000485035.3	Assembled from SLRseq reads (SRP049776)
ENST00000665112.1	Assembled from SLRseq reads (SRP049776)
ENST00000645583.2	Assembled from SLRseq reads (SRP049776)
ENST00000654649.1	Assembled from SLRseq reads (SRP049776)
ENST00000600801.7	Assembled from SLRseq reads (SRP049776)
ENST00000596250.7	Assembled from SLRseq reads (SRP049776)
ENST00000642301.2	Assembled from SLRseq reads (SRP049776)
ENST00000466034.7	Assembled from SLRseq reads (SRP049776)
ENST00000593549.6	NAGNAG splice site
ENST00000629552.2	NAGNAG splice site
ENST00000626619.2	NAGNAG splice site
ENST00000628810.2	NAGNAG splice site
ENST00000646296.2	Assembled from SLRseq reads (SRP049776)
ENST00000663941.1	Assembled from SLRseq reads (SRP049776)
ENST00000661093.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653745.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653745.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000669988.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671626.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671626.1	Assembled from SLRseq reads (SRP049776)
ENST00000671542.1	Assembled from SLRseq reads (SRP049776)
ENST00000665103.1	Assembled from SLRseq reads (SRP049776)
ENST00000666802.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666802.1	Assembled from SLRseq reads (SRP049776)
ENST00000669087.1	Assembled from SLRseq reads (SRP049776)
ENST00000660625.1	Assembled from SLRseq reads (SRP049776)
ENST00000460993.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000636224.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000325404.3	MANE_select
ENST00000653372.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660595.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656417.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658146.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000625746.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653529.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663678.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656291.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658068.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670610.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663520.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000625253.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659291.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669452.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000596820.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664878.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669606.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662045.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662014.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655284.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657754.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000630341.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000490001.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658971.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000467313.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653068.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665354.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665009.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659979.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653513.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654873.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658359.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670378.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667275.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000600750.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660999.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000614303.4	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654624.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655739.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658854.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000628934.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658210.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660719.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667486.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000476815.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000628718.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669382.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661294.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657406.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671631.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666439.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662948.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667792.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669780.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666871.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000629026.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000627881.2	non canonical TEC
ENST00000655047.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668631.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658690.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668105.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666595.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661673.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661651.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664956.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662056.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668891.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669175.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000629138.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660147.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000628320.2	non canonical TEC
ENST00000654747.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663203.1	Assembled from RACEseq reads
ENST00000608102.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608102.2	Assembled from RACEseq reads
ENST00000655484.1	Assembled from RACEseq reads
ENST00000608042.6	Assembled from RACEseq reads
ENST00000657472.1	Assembled from RACEseq reads
ENST00000665199.1	Assembled from RACEseq reads
ENST00000654438.1	Assembled from RACEseq reads
ENST00000609168.2	Assembled from RACEseq reads
ENST00000658782.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658782.1	Assembled from RACEseq reads
ENST00000630063.3	Assembled from RACEseq reads
ENST00000655812.1	Assembled from RACEseq reads
ENST00000462382.1	GENCODE experimental pipeline
ENST00000669633.1	Assembled from RACEseq reads
ENST00000473893.1	GENCODE experimental pipeline
ENST00000662733.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661576.1	Assembled from SLRseq reads (SRP049776)
ENST00000488882.1	not organism-supported
ENST00000323116.10	MANE_select
ENST00000482794.1	not organism-supported
ENST00000482070.1	GENCODE experimental pipeline
ENST00000292782.9	MANE_select
ENST00000460412.6	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000460412.6	alternative 5' UTR
ENST00000469954.5	GENCODE experimental pipeline
ENST00000497606.5	alternative 5' UTR
ENST00000487822.5	alternative 5' UTR
ENST00000466812.1	alternative 5' UTR
ENST00000265594.9	MANE_select
ENST00000265598.8	MANE_select
ENST00000476015.1	alternative 5' UTR
ENST00000470251.1	GENCODE experimental pipeline
ENST00000470251.1	alternative 5' UTR
ENST00000486686.1	QC splicing correct
ENST00000326505.4	MANE_select
ENST00000493370.1	GENCODE experimental pipeline
ENST00000493370.1	alternative 5' UTR
ENST00000464191.1	alternative 5' UTR
ENST00000460419.1	alternative 5' UTR
ENST00000464923.1	alternative 5' UTR
ENST00000496270.5	GENCODE experimental pipeline
ENST00000465010.1	alternative 5' UTR
ENST00000477699.1	GENCODE experimental pipeline
ENST00000481531.1	alternative 5' UTR
ENST00000341319.8	MANE_select
ENST00000493074.1	alternative 5' UTR
ENST00000437402.5	QC splicing correct
ENST00000437402.5	alternative 5' UTR
ENST00000454495.6	alternative 5' UTR
ENST00000473045.5	alternative 5' UTR
ENST00000468101.5	alternative 5' UTR
ENST00000427201.2	alternative 5' UTR
ENST00000482138.1	alternative 5' UTR
ENST00000454652.6	alternative 5' UTR
ENST00000242810.11	MANE_select
ENST00000468001.1	alternative 5' UTR
ENST00000492409.2	QC splicing correct
ENST00000305135.10	MANE_select
ENST00000432781.1	GENCODE experimental pipeline
ENST00000625709.1	non canonical TEC
ENST00000609195.1	454 RNA-Seq supported
ENST00000318631.8	MANE_select
ENST00000431348.1	GENCODE experimental pipeline
ENST00000317096.9	MANE_select
ENST00000334444.11	MANE_select
ENST00000392579.6	GENCODE experimental pipeline
ENST00000437341.5	alternative 5' UTR
ENST00000422946.1	GENCODE experimental pipeline
ENST00000428798.7	MANE_select
ENST00000428798.7	NP_001138615.1
ENST00000318351.2	MANE_select
ENST00000431427.1	GENCODE experimental pipeline
ENST00000608135.1	CAGE supported TSS
ENST00000648915.2	LR annotation
ENST00000648915.2	MANE_select
ENST00000313143.9	CAGE supported TSS
ENST00000313143.9	LR annotation
ENST00000313143.9	MANE_select
ENST00000292807.9	MANE_select
ENST00000448139.5	QC splicing correct
ENST00000455925.1	alternative 5' UTR
ENST00000439647.5	alternative 5' UTR
ENST00000426955.6	NP_612354
ENST00000397676.8	MANE_select
ENST00000455059.5	GENCODE experimental pipeline
ENST00000414845.5	QC splicing correct
ENST00000324557.9	MANE_select
ENST00000296238.4	MANE_select
ENST00000404464.8	MANE_select
ENST00000417952.5	GENCODE experimental pipeline
ENST00000310118.9	MANE_select
ENST00000310118.9	upstream_ATG-80aa
ENST00000432855.1	GENCODE experimental pipeline
ENST00000444134.5	alternative 5' UTR
ENST00000382330.7	alternative 5' UTR
ENST00000346169.7	MANE_select
ENST00000455679.5	alternative 5' UTR
ENST00000427141.6	alternative 5' UTR
ENST00000427845.5	alternative 5' UTR
ENST00000456033.5	GENCODE experimental pipeline
ENST00000427607.5	alternative 5' UTR
ENST00000448284.1	GENCODE experimental pipeline
ENST00000450976.5	alternative 5' UTR
ENST00000418281.5	Genoscope mRNA only
ENST00000433578.5	alternative 5' UTR
ENST00000418768.5	alternative 5' UTR
ENST00000383847.7	MANE_select
ENST00000383847.7	NP_653236.3
ENST00000453072.5	alternative 5' UTR
ENST00000265593.9	MANE_select
ENST00000636180.1	alternative 3' UTR
ENST00000636241.1	alternative 3' UTR
ENST00000638134.1	alternative 3' UTR
ENST00000475279.2	alternative 3' UTR
ENST00000412877.1	alternative 5' UTR
ENST00000455712.5	alternative 5' UTR
ENST00000452961.5	alternative 5' UTR
ENST00000429568.1	GENCODE experimental pipeline
ENST00000647395.1	CAGE supported TSS
ENST00000647395.1	LR annotation
ENST00000647395.1	MANE_select
ENST00000649095.1	LR annotation
ENST00000649095.1	PMID:9834204
ENST00000645603.2	upstream ATG
ENST00000648612.1	NMD likely if extended
ENST00000450923.5	GENCODE experimental pipeline
ENST00000419960.1	GENCODE experimental pipeline
ENST00000451348.1	GENCODE experimental pipeline
ENST00000330394.3	MANE_select
ENST00000317897.5	MANE_select
ENST00000663807.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666332.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665864.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660522.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671525.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000610001.2	Assembled from RACEseq reads
ENST00000657359.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000457449.1	GENCODE experimental pipeline
ENST00000665196.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661124.1	Assembled from SLRseq reads (SRP049776)
ENST00000625842.3	CAGE supported TSS
ENST00000625842.3	MANE_select
ENST00000625842.3	NP_001009921.1
ENST00000436792.6	NP_056118
ENST00000422105.5	QC splicing correct
ENST00000422105.5	alternative 5' UTR
ENST00000453056.5	alternative 5' UTR
ENST00000471655.1	GENCODE experimental pipeline
ENST00000441141.5	alternative 5' UTR
ENST00000445089.5	alternative 5' UTR
ENST00000335012.3	MANE_select
ENST00000231887.8	MANE_select
ENST00000456310.5	GENCODE experimental pipeline
ENST00000483104.5	QC splicing correct
ENST00000465178.1	GENCODE experimental pipeline
ENST00000447637.1	alternative 5' UTR
ENST00000454237.1	GENCODE experimental pipeline
ENST00000454237.1	alternative 5' UTR
ENST00000438798.1	alternative 5' UTR
ENST00000428617.1	alternative 5' UTR
ENST00000265026.8	MANE_select
ENST00000439882.1	QC splicing correct
ENST00000420577.1	GENCODE experimental pipeline
ENST00000421852.6	MANE_select
ENST00000296254.3	GENCODE experimental pipeline
ENST00000467520.1	GENCODE experimental pipeline
ENST00000651456.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000296252.9	MANE_select
ENST00000424591.6	GENCODE experimental pipeline
ENST00000452897.1	GENCODE experimental pipeline
ENST00000296257.10	MANE_select
ENST00000296257.10	upstream_ATG-75aa
ENST00000444509.1	GENCODE experimental pipeline
ENST00000382199.7	MANE_select
ENST00000382199.7	NP_006539
ENST00000453386.7	MANE_select
ENST00000382191.4	Sw:P62995-3
ENST00000342294.4	Sw:P62995-2
ENST00000306376.10	MANE_select
ENST00000434744.5	alternative 5' UTR
ENST00000440773.5	alternative 5' UTR
ENST00000421809.5	alternative 5' UTR
ENST00000413301.5	alternative 5' UTR
ENST00000453370.1	GENCODE experimental pipeline
ENST00000265022.8	MANE_select
ENST00000664789.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665684.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653290.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651581.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000659303.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667882.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665288.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670005.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653327.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660881.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659833.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655604.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658309.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662106.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661596.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663132.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000414102.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670102.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000421006.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000435548.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657246.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657428.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662985.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671153.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663703.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658003.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000434896.1	GENCODE experimental pipeline
ENST00000653537.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000441169.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427474.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427474.2	GENCODE experimental pipeline
ENST00000669782.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000458099.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662825.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666843.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666408.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666408.1	GENCODE experimental pipeline
ENST00000664567.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664591.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667213.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654350.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664389.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671324.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456535.1	GENCODE experimental pipeline
ENST00000307944.6	MANE_select
ENST00000307944.6	alternative 5' UTR
ENST00000338733.10	MANE_select
ENST00000446782.5	GENCODE experimental pipeline
ENST00000479590.1	GENCODE experimental pipeline
ENST00000413695.1	alternative 5' UTR
ENST00000430560.1	GENCODE experimental pipeline
ENST00000680338.1	long_read_pipeline_2
ENST00000464877.2	align_id:3693174|asmbl_183339
ENST00000495390.2	align_id:3693170|asmbl_183335
ENST00000265028.8	CAGE supported TSS
ENST00000265028.8	MANE_select
ENST00000681475.1	align_id:3693173|asmbl_183338
ENST00000681543.1	align_id:3693192|asmbl_183357
ENST00000681543.1	long_read_pipeline_2
ENST00000679794.1	align_id:3693191|asmbl_183356
ENST00000625826.1	non canonical TEC
ENST00000411641.7	MANE_select
ENST00000273784.5	GENCODE experimental pipeline
ENST00000431018.5	GENCODE experimental pipeline
ENST00000450521.5	alternative 5' UTR
ENST00000265029.8	MANE_select
ENST00000232003.5	MANE_select
ENST00000447445.1	GENCODE experimental pipeline
ENST00000447445.1	NP_001159923.1
ENST00000287611.8	CAGE supported TSS
ENST00000287611.8	LR annotation
ENST00000644859.2	CAGE supported TSS
ENST00000644859.2	LR annotation
ENST00000644859.2	MANE_select
ENST00000441007.5	alternative 5' UTR
ENST00000445596.5	alternative 5' UTR
ENST00000323963.10	MANE_select
ENST00000392481.6	alternative 5' UTR
ENST00000296273.7	MANE_select
ENST00000418288.5	alternative 5' UTR
ENST00000427785.5	alternative 5' UTR
ENST00000448497.1	alternative 5' UTR
ENST00000411792.1	alternative 5' UTR
ENST00000434957.1	GENCODE experimental pipeline
ENST00000320741.7	MANE_select
ENST00000320741.7	alternative 5' UTR
ENST00000676786.1	align_id:3693264|asmbl_183429
ENST00000169298.8	MANE_select
ENST00000427315.5	alternative 5' UTR
ENST00000677292.1	align_id:3693256|asmbl_183421
ENST00000458216.5	alternative 5' UTR
ENST00000430309.5	alternative 5' UTR
ENST00000417392.5	alternative 5' UTR
ENST00000438590.5	alternative 5' UTR
ENST00000448408.5	alternative 5' UTR
ENST00000676633.1	align_id:3693261|asmbl_183426
ENST00000440338.5	alternative 5' UTR
ENST00000448044.5	alternative 5' UTR
ENST00000416235.6	align_id:3693254|asmbl_183419
ENST00000416235.6	alternative 5' UTR
ENST00000423451.5	alternative 5' UTR
ENST00000446170.1	alternative 5' UTR
ENST00000442023.1	GENCODE experimental pipeline
ENST00000442023.1	alternative 5' UTR
ENST00000296277.9	MANE_select
ENST00000296277.9	alternative 5' UTR
ENST00000433055.1	alternative 5' UTR
ENST00000312295.5	MANE_select
ENST00000296280.11	MANE_select
ENST00000392470.6	GENCODE experimental pipeline
ENST00000392475.2	GENCODE experimental pipeline
ENST00000465015.1	GENCODE experimental pipeline
ENST00000439271.1	GENCODE experimental pipeline
ENST00000425937.1	alternative 5' UTR
ENST00000259030.3	MANE_select
ENST00000287641.4	MANE_select
ENST00000406870.7	MANE_select
ENST00000232014.8	alternative 5' UTR
ENST00000430339.5	alternative 5' UTR
ENST00000438077.1	alternative 5' UTR
ENST00000433178.1	GENCODE experimental pipeline
ENST00000417384.1	GENCODE experimental pipeline
ENST00000423643.1	GENCODE experimental pipeline
ENST00000446091.1	GENCODE experimental pipeline
ENST00000415940.1	GENCODE experimental pipeline
ENST00000444379.1	GENCODE experimental pipeline
ENST00000664181.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658601.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000416784.5	alternative 5' UTR
ENST00000430340.5	alternative 5' UTR
ENST00000414139.5	alternative 5' UTR
ENST00000454789.5	alternative 5' UTR
ENST00000426274.5	alternative 5' UTR
ENST00000420410.5	alternative 5' UTR
ENST00000443217.5	alternative 5' UTR
ENST00000457242.1	alternative 5' UTR
ENST00000474472.5	GENCODE experimental pipeline
ENST00000484468.1	GENCODE experimental pipeline
ENST00000487347.1	GENCODE experimental pipeline
ENST00000483938.1	GENCODE experimental pipeline
ENST00000494044.1	GENCODE experimental pipeline
ENST00000444488.1	GENCODE experimental pipeline
ENST00000433971.5	alternative 5' UTR
ENST00000412373.5	alternative 5' UTR
ENST00000473790.1	GENCODE experimental pipeline
ENST00000345063.8	MANE_select
ENST00000456832.1	GENCODE experimental pipeline
ENST00000493725.1	GENCODE experimental pipeline
ENST00000425454.1	GENCODE experimental pipeline
ENST00000425454.1	QC splicing correct
ENST00000264731.8	MANE_select
ENST00000434928.5	QC splicing correct
ENST00000392461.7	Sw:Q9H3D4-8.1
ENST00000319332.10	MANE_select
ENST00000444866.5	alternative 5' UTR
ENST00000426003.1	alternative 5' UTR
ENST00000412203.2	Assembled from SLRseq reads (SRP049776)
ENST00000295522.4	MANE_select
ENST00000456423.2	GENCODE experimental pipeline
ENST00000456423.2	upstream ATG
ENST00000264734.3	MANE_select
ENST00000264734.3	upstream ATG
ENST00000354905.3	MANE_select
ENST00000439062.6	alternative 5' UTR
ENST00000447382.6	MANE_select
ENST00000447382.6	alternative 5' UTR
ENST00000422625.5	alternative 5' UTR
ENST00000434491.5	Genoscope mRNA only
ENST00000422940.5	alternative 5' UTR
ENST00000453359.5	alternative 5' UTR
ENST00000453359.5	upstream_ATG-1aa
ENST00000668289.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658848.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665139.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000442080.6	MANE_select
ENST00000456552.1	QC splicing correct
ENST00000662178.1	Assembled from SLRseq reads (SRP049776)
ENST00000427544.6	alternative 5' UTR
ENST00000432514.5	alternative 5' UTR
ENST00000392455.9	LR annotation
ENST00000392455.9	MANE_select
ENST00000657540.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662007.1	Assembled from SLRseq reads (SRP049776)
ENST00000664732.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666632.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668751.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668751.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000439804.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663647.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669884.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664994.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656380.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660290.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653490.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656942.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666456.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668276.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671595.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669360.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651548.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661029.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658347.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662578.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661668.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664223.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667184.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667184.1	Assembled from SLRseq reads (SRP049776)
ENST00000662906.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655253.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438488.1	GENCODE experimental pipeline
ENST00000518817.1	MANE_select
ENST00000452657.5	GENCODE experimental pipeline
ENST00000653109.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000445105.7	CAGE supported TSS
ENST00000445105.7	MANE_select
ENST00000450716.5	alternative 5' UTR
ENST00000418610.1	alternative 5' UTR
ENST00000443165.1	GENCODE experimental pipeline
ENST00000392452.3	MANE_select
ENST00000414895.1	GENCODE experimental pipeline
ENST00000264735.4	MANE_select
ENST00000416012.1	not organism-supported
ENST00000342358.9	MANE_select
ENST00000495496.1	not organism-supported
ENST00000414634.1	GENCODE experimental pipeline
ENST00000342695.9	MANE_select
ENST00000392443.7	GENCODE experimental pipeline
ENST00000361828.7	LR annotation
ENST00000361510.8	LR annotation
ENST00000361510.8	MANE_select
ENST00000361510.8	NP_570850.2
ENST00000646793.1	NP_570844
ENST00000392437.6	NP_570847.2
ENST00000429164.1	GENCODE experimental pipeline
ENST00000444085.1	GENCODE experimental pipeline
ENST00000666648.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664530.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665314.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667794.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000622169.5	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000626476.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654490.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658493.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666539.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662513.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000443776.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667864.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663517.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656099.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657966.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660282.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660199.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665355.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668675.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661206.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659267.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654593.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656867.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666958.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668727.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668599.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669236.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653573.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660052.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000625668.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669285.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665835.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000670206.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000593326.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000598535.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000601913.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000609015.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660359.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000625586.1	d_H9VBWKP02
ENST00000655827.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000457815.1	GENCODE experimental pipeline
ENST00000232424.4	MANE_select
ENST00000667386.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662346.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654010.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662552.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000415869.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432908.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658228.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666638.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664894.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653788.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657249.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664340.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669096.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000455821.1	GENCODE experimental pipeline
ENST00000440556.1	not organism-supported
ENST00000653696.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670716.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669998.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659219.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456816.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670959.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654752.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660996.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658886.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000323830.4	MANE_select
ENST00000429275.1	not organism-supported
ENST00000347624.4	MANE_select
ENST00000645538.1	LR annotation
ENST00000645538.1	alternative 5' UTR
ENST00000645319.2	CAGE supported TSS
ENST00000645319.2	MANE_select
ENST00000446356.1	alternative 5' UTR
ENST00000665891.1	Assembled from SLRseq reads (SRP049776)
ENST00000665891.1	GENCODE experimental pipeline
ENST00000661941.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671306.1	Assembled from SLRseq reads (SRP049776)
ENST00000437597.2	Assembled from SLRseq reads (SRP049776)
ENST00000662856.1	Assembled from SLRseq reads (SRP049776)
ENST00000448892.2	Assembled from SLRseq reads (SRP049776)
ENST00000448892.2	GENCODE experimental pipeline
ENST00000670064.1	Assembled from SLRseq reads (SRP049776)
ENST00000656823.1	Assembled from SLRseq reads (SRP049776)
ENST00000653684.1	Assembled from SLRseq reads (SRP049776)
ENST00000657621.1	Assembled from SLRseq reads (SRP049776)
ENST00000666676.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000447982.6	Assembled from SLRseq reads (SRP049776)
ENST00000419571.1	GENCODE experimental pipeline
ENST00000347147.9	MANE_select
ENST00000476750.1	GENCODE experimental pipeline
ENST00000429560.1	GENCODE experimental pipeline
ENST00000447139.1	GENCODE experimental pipeline
ENST00000265245.10	MANE_select
ENST00000437613.1	GENCODE experimental pipeline
ENST00000480853.1	GENCODE experimental pipeline
ENST00000329759.6	MANE_select
ENST00000657492.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439479.1	GENCODE experimental pipeline
ENST00000662913.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666967.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653661.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664076.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669492.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655373.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654504.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670579.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670880.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654487.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664371.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660104.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660286.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658471.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668747.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669157.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667646.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666554.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658821.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670468.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669350.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670673.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658495.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669158.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666540.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653914.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669045.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664066.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670809.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653615.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653545.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670519.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662904.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670592.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658464.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663443.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000455796.1	GENCODE experimental pipeline
ENST00000671408.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662703.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000415410.1	GENCODE experimental pipeline
ENST00000427064.1	GENCODE experimental pipeline
ENST00000310380.11	MANE_select
ENST00000460582.1	GENCODE experimental pipeline
ENST00000458531.1	GENCODE experimental pipeline
ENST00000447975.1	GENCODE experimental pipeline
ENST00000426468.1	GENCODE experimental pipeline
ENST00000426468.1	QC splicing correct
ENST00000664895.1	Assembled from SLRseq reads (SRP049776)
ENST00000326793.11	MANE_select
ENST00000618156.5	MANE_select
ENST00000426109.1	GENCODE experimental pipeline
ENST00000417011.1	GENCODE experimental pipeline
ENST00000415451.1	GENCODE experimental pipeline
ENST00000343267.8	MANE_select
ENST00000453131.1	alternative 5' UTR
ENST00000631189.2	non canonical TEC
ENST00000625383.2	non canonical TEC
ENST00000626233.2	non canonical TEC
ENST00000625665.1	non canonical TEC
ENST00000436408.6	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000485430.1	GENCODE experimental pipeline
ENST00000485430.1	QC splicing correct
ENST00000480350.1	GENCODE experimental pipeline
ENST00000447234.7	MANE_select
ENST00000463781.8	MANE_select
ENST00000486425.1	GENCODE experimental pipeline
ENST00000478685.1	GENCODE experimental pipeline
ENST00000444346.1	GENCODE experimental pipeline
ENST00000429834.1	GENCODE experimental pipeline
ENST00000672548.1	CAGE supported TSS
ENST00000678220.1	CHS.39410.18
ENST00000671753.1	upstream ATG
ENST00000428187.7	NP_001294975.1
ENST00000673440.1	NMD likely if extended
ENST00000672098.1	CAGE supported TSS
ENST00000672669.1	CAGE supported TSS
ENST00000672669.1	alternative 5' UTR
ENST00000672886.1	CAGE supported TSS
ENST00000672886.1	alternative 5' UTR
ENST00000671767.1	CAGE supported TSS
ENST00000671767.1	GENCODE experimental pipeline
ENST00000671734.1	GENCODE experimental pipeline
ENST00000673167.1	NMD likely if extended
ENST00000672542.1	alternative 5' UTR
ENST00000673559.1	alternative 5' UTR
ENST00000671880.1	alternative 5' UTR
ENST00000650913.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000448113.1	GENCODE experimental pipeline
ENST00000669433.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650701.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650701.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000360110.9	MANE_select
ENST00000392396.7	alternative 5' UTR
ENST00000662916.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659409.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000457079.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000457079.2	GENCODE experimental pipeline
ENST00000670584.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662113.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669905.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654470.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000296326.8	MANE_select
ENST00000416660.1	GENCODE experimental pipeline
ENST00000296327.10	MANE_select
ENST00000428985.1	GENCODE experimental pipeline
ENST00000496737.1	GENCODE experimental pipeline
ENST00000431016.6	MANE_select
ENST00000431016.6	alternative 5' UTR
ENST00000411591.5	alternative 5' UTR
ENST00000433733.5	GENCODE experimental pipeline
ENST00000412869.5	alternative 5' UTR
ENST00000443555.1	alternative 5' UTR
ENST00000608995.1	454 RNA-Seq supported
ENST00000491186.5	GENCODE experimental pipeline
ENST00000325318.10	MANE_select
ENST00000420226.1	GENCODE experimental pipeline
ENST00000452051.1	GENCODE experimental pipeline
ENST00000446879.5	GENCODE experimental pipeline
ENST00000273695.4	MANE_select
ENST00000296328.9	MANE_select
ENST00000318037.3	MANE_select
ENST00000397537.3	MANE_select
ENST00000332629.7	MANE_select
ENST00000433160.1	GENCODE experimental pipeline
ENST00000456677.1	alternative 5' UTR
ENST00000425888.1	alternative 5' UTR
ENST00000311630.7	MANE_select
ENST00000663848.1	Assembled from SLRseq reads (SRP049776)
ENST00000328557.5	MANE_select
ENST00000426755.5	alternative 5' UTR
ENST00000392391.9	MANE_select
ENST00000409690.5	MANE_select
ENST00000409690.5	NM_032898.2
ENST00000399942.4	GENCODE experimental pipeline
ENST00000399942.4	QC splicing correct
ENST00000327134.7	MANE_select
ENST00000323460.10	MANE_select
ENST00000434433.1	GENCODE experimental pipeline
ENST00000467803.1	GENCODE experimental pipeline
ENST00000447325.5	GENCODE experimental pipeline
ENST00000321256.10	MANE_select
ENST00000321256.10	upstream_ATG-31aa
ENST00000452404.6	GENCODE experimental pipeline
ENST00000422610.5	alternative 5' UTR
ENST00000411704.1	QC splicing correct
ENST00000411704.1	alternative 5' UTR
ENST00000455953.1	QC splicing correct
ENST00000455953.1	alternative 5' UTR
ENST00000447775.1	GENCODE experimental pipeline
ENST00000602845.2	MANE_select
ENST00000412723.6	MANE_select
ENST00000413127.1	GENCODE experimental pipeline
ENST00000443835.1	GENCODE experimental pipeline
ENST00000650936.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000296350.10	MANE_select
ENST00000424769.1	GENCODE experimental pipeline
ENST00000414354.1	GENCODE experimental pipeline
ENST00000667157.1	CAGE supported TSS
ENST00000667157.1	LR annotation
ENST00000667157.1	MANE_select
ENST00000656428.1	CAGE supported TSS
ENST00000663148.1	alternative 5' UTR
ENST00000670455.1	alternative 5' UTR
ENST00000653331.1	NAGNAG splice site
ENST00000660432.1	alternative 5' UTR
ENST00000659221.1	NAGNAG splice site
ENST00000657381.1	NAGNAG splice site
ENST00000657381.1	alternative 5' UTR
ENST00000419354.5	alternative 5' UTR
ENST00000661440.1	NAGNAG splice site
ENST00000436682.6	alternative 5' UTR
ENST00000656944.1	NAGNAG splice site
ENST00000469073.2	CAGE supported TSS
ENST00000469073.2	NAGNAG splice site
ENST00000392380.6	alternative 5' UTR
ENST00000412364.2	alternative 5' UTR
ENST00000434148.1	alternative 5' UTR
ENST00000430666.1	GENCODE experimental pipeline
ENST00000653937.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656096.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657499.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669801.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438408.1	GENCODE experimental pipeline
ENST00000445908.1	GENCODE experimental pipeline
ENST00000392379.6	MANE_select
ENST00000392379.6	genebuild_only_MANE
ENST00000651856.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000441275.5	GENCODE experimental pipeline
ENST00000441275.5	Genoscope mRNA only
ENST00000446746.5	alternative 5' UTR
ENST00000455876.1	GENCODE experimental pipeline
ENST00000483920.1	GENCODE experimental pipeline
ENST00000432819.5	alternative 5' UTR
ENST00000431056.5	alternative 5' UTR
ENST00000445160.2	alternative 5' UTR
ENST00000468710.1	GENCODE experimental pipeline
ENST00000476764.2	GENCODE experimental pipeline
ENST00000667447.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663117.1	Assembled from SLRseq reads (SRP049776)
ENST00000296343.10	MANE_select
ENST00000447048.1	GENCODE experimental pipeline
ENST00000472149.1	GENCODE experimental pipeline
ENST00000428738.5	GENCODE experimental pipeline
ENST00000428738.5	alternative 5' UTR
ENST00000415708.6	GENCODE experimental pipeline
ENST00000241502.9	MANE_select
ENST00000424384.2	GENCODE experimental pipeline
ENST00000428136.2	alternative 3' UTR
ENST00000425562.7	MANE_select
ENST00000455191.5	alternative 5' UTR
ENST00000265239.11	MANE_select
ENST00000452735.1	alternative 5' UTR
ENST00000448864.6	alternative 5' UTR
ENST00000647248.2	CAGE supported TSS
ENST00000647248.2	LR annotation
ENST00000647248.2	MANE_select
ENST00000329092.12	NMD likely if extended
ENST00000442341.5	alternative 5' UTR
ENST00000656182.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000423460.1	QC splicing correct
ENST00000634862.1	not best-in-genome evidence
ENST00000610261.6	MANE_select
ENST00000510175.6	MANE_select
ENST00000419098.6	MANE_select
ENST00000653800.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000240499.8	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000240499.8	MANE_select
ENST00000511833.3	MANE_select
ENST00000511833.3	NP_597731.2
ENST00000453061.7	MANE_select
ENST00000511448.5	QC splicing correct
ENST00000509768.1	GENCODE experimental pipeline
ENST00000510235.1	GENCODE experimental pipeline
ENST00000504879.1	QC splicing correct
ENST00000610212.3	CAGE supported TSS
ENST00000610212.3	MANE_select
ENST00000663081.1	Assembled from SLRseq reads (SRP049776)
ENST00000665587.1	Assembled from SLRseq reads (SRP049776)
ENST00000666138.1	Assembled from SLRseq reads (SRP049776)
ENST00000670371.1	Assembled from SLRseq reads (SRP049776)
ENST00000496514.6	MANE_select
ENST00000465426.5	alternative 5' UTR
ENST00000487902.5	GENCODE experimental pipeline
ENST00000488061.5	alternative 5' UTR
ENST00000471824.6	GENCODE experimental pipeline
ENST00000461490.1	GENCODE experimental pipeline
ENST00000489312.1	GENCODE experimental pipeline
ENST00000304312.5	MANE_select
ENST00000505477.5	alternative 5' UTR
ENST00000511290.5	alternative 5' UTR
ENST00000322224.9	MANE_select
ENST00000515118.5	GENCODE experimental pipeline
ENST00000503156.5	Genoscope mRNA only
ENST00000503156.5	QC splicing correct
ENST00000512249.1	GENCODE experimental pipeline
ENST00000419774.5	alternative 5' UTR
ENST00000427463.5	alternative 5' UTR
ENST00000470161.6	alternative 5' UTR
ENST00000430644.5	FLJ32562
ENST00000440452.5	FLJ43813
ENST00000440452.5	alternative 5' UTR
ENST00000433814.5	alternative 5' UTR
ENST00000660016.1	Assembled from SLRseq reads (SRP049776)
ENST00000665579.1	Assembled from SLRseq reads (SRP049776)
ENST00000503571.5	GENCODE experimental pipeline
ENST00000652800.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000503405.1	GENCODE experimental pipeline
ENST00000454037.1	GENCODE experimental pipeline
ENST00000304062.11	MANE_select
ENST00000651141.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000314167.9	MANE_select
ENST00000514453.5	GENCODE experimental pipeline
ENST00000515492.5	alternative 5' UTR
ENST00000264771.9	MANE_select
ENST00000510493.5	alternative 5' UTR
ENST00000514546.5	alternative 5' UTR
ENST00000273814.8	MANE_select
ENST00000509465.5	GENCODE experimental pipeline
ENST00000515182.1	not organism-supported
ENST00000502309.1	NMD likely if extended
ENST00000398520.6	NP_602297.1
ENST00000398516.3	MANE_select
ENST00000398516.3	alternative 5' UTR
ENST00000514224.2	LR annotation
ENST00000514224.2	MANE_select
ENST00000510644.6	MANE_select
ENST00000510644.6	alternative 5' UTR
ENST00000504138.5	alternative 5' UTR
ENST00000512174.1	alternative 5' UTR
ENST00000507339.5	alternative 5' UTR
ENST00000505693.5	Genoscope mRNA only
ENST00000505693.5	QC splicing correct
ENST00000433731.7	MANE_select
ENST00000290902.10	MANE_select
ENST00000503765.5	alternative 5' UTR
ENST00000515004.5	alternative 5' UTR
ENST00000502483.5	alternative 5' UTR
ENST00000514490.5	alternative 5' UTR
ENST00000509233.5	alternative 5' UTR
ENST00000511679.5	alternative 5' UTR
ENST00000511672.5	alternative 5' UTR
ENST00000502657.1	GENCODE experimental pipeline
ENST00000505653.1	GENCODE experimental pipeline
ENST00000515553.1	GENCODE experimental pipeline
ENST00000609548.1	CAGE supported TSS
ENST00000382952.8	MANE_select
ENST00000382952.8	NP_001012632.1
ENST00000515399.5	alternative 5' UTR
ENST00000513420.1	alternative 5' UTR
ENST00000670838.1	Assembled from SLRseq reads (SRP049776)
ENST00000514984.1	GENCODE experimental pipeline
ENST00000505177.6	GENCODE experimental pipeline
ENST00000264750.10	NP_005873.2
ENST00000303400.9	MANE_select
ENST00000510794.5	GENCODE experimental pipeline
ENST00000512842.5	GENCODE experimental pipeline
ENST00000505839.1	GENCODE experimental pipeline
ENST00000389851.10	MANE_select
ENST00000511216.6	alternative 5' UTR
ENST00000507531.5	alternative 5' UTR
ENST00000511563.5	alternative 5' UTR
ENST00000422806.2	MANE_select
ENST00000422806.2	QC splicing correct
ENST00000422806.2	confirm experimentally
ENST00000308132.10	alternative 5' UTR
ENST00000489418.6	MANE_select
ENST00000605571.1	CAGE supported TSS
ENST00000458173.4	CAGE supported TSS
ENST00000458173.4	alternative 5' UTR
ENST00000651472.1	alternative 5' UTR
ENST00000651472.1	upstream ATG
ENST00000612220.5	GENCODE experimental pipeline
ENST00000313288.9	CAGE supported TSS
ENST00000313288.9	LR annotation
ENST00000313288.9	MANE_select
ENST00000493975.5	alternative 5' UTR
ENST00000652770.1	NAGNAG splice site
ENST00000382936.8	MANE_select
ENST00000440486.8	MANE_select
ENST00000481110.7	300216
ENST00000481110.7	315774
ENST00000481110.7	NAGNAG splice site
ENST00000302787.3	MANE_select
ENST00000508803.6	MANE_select
ENST00000508803.6	alternative 5' UTR
ENST00000507820.5	alternative 5' UTR
ENST00000514045.5	alternative 5' UTR
ENST00000509115.5	alternative 5' UTR
ENST00000512700.2	align_id:3694983|asmbl_185148
ENST00000677559.1	align_id:3694978|asmbl_185143
ENST00000678714.1	align_id:3694976|asmbl_185141
ENST00000678714.1	long_read_pipeline_2
ENST00000679039.1	align_id:3694980|asmbl_185145
ENST00000382882.9	CAGE supported TSS
ENST00000382882.9	MANE_select
ENST00000382882.9	upstream ATG
ENST00000416258.5	GENCODE experimental pipeline
ENST00000453740.5	GENCODE experimental pipeline
ENST00000455762.5	GENCODE experimental pipeline
ENST00000411649.3	GENCODE experimental pipeline
ENST00000443203.5	CAGE supported TSS
ENST00000423729.3	MANE_select
ENST00000511885.6	MANE_select
ENST00000443786.3	MANE_select
ENST00000443786.3	alternative 5' UTR
ENST00000514395.1	alternative 5' UTR
ENST00000502440.1	alternative 5' UTR
ENST00000502636.1	GENCODE experimental pipeline
ENST00000337190.7	MANE_select
ENST00000508471.5	GENCODE experimental pipeline
ENST00000290974.7	CCDS33942.1
ENST00000290974.7	MANE_select
ENST00000502316.5	alternative 5' UTR
ENST00000314289.13	MANE_select
ENST00000503123.5	GENCODE experimental pipeline
ENST00000506706.5	alternative 5' UTR
ENST00000511600.5	alternative 5' UTR
ENST00000513450.1	alternative 5' UTR
ENST00000637812.2	MANE_select
ENST00000637812.2	alternative 5' UTR
ENST00000502458.5	GENCODE experimental pipeline
ENST00000315423.12	MANE_select
ENST00000503219.5	alternative 5' UTR
ENST00000503393.8	CAGE supported TSS
ENST00000503393.8	LR annotation
ENST00000503393.8	MANE_select
ENST00000504294.5	alternative 5' UTR
ENST00000508385.5	alternative 5' UTR
ENST00000512014.5	alternative 5' UTR
ENST00000513095.5	alternative 5' UTR
ENST00000502260.5	alternative 5' UTR
ENST00000435136.8	CAGE supported TSS
ENST00000356331.9	alternative 5' UTR
ENST00000511797.5	alternative 5' UTR
ENST00000355842.7	GENCODE experimental pipeline
ENST00000651918.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000398123.6	NP_789771
ENST00000664060.1	Assembled from SLRseq reads (SRP049776)
ENST00000355443.9	MANE_select
ENST00000329687.8	alternative 5' UTR
ENST00000508221.5	GENCODE experimental pipeline
ENST00000508221.5	Genoscope mRNA only
ENST00000508221.5	QC splicing correct
ENST00000671407.1	Assembled from SLRseq reads (SRP049776)
ENST00000658490.1	Assembled from SLRseq reads (SRP049776)
ENST00000515194.6	Assembled from SLRseq reads (SRP049776)
ENST00000507702.2	Assembled from SLRseq reads (SRP049776)
ENST00000662831.1	Assembled from SLRseq reads (SRP049776)
ENST00000664833.1	Assembled from SLRseq reads (SRP049776)
ENST00000663849.1	Assembled from SLRseq reads (SRP049776)
ENST00000671608.1	Assembled from SLRseq reads (SRP049776)
ENST00000416614.7	MANE_select
ENST00000502735.5	GENCODE experimental pipeline
ENST00000398052.9	MANE_select
ENST00000355072.10	LR annotation
ENST00000513806.1	NMD likely if extended
ENST00000664062.1	Assembled from SLRseq reads (SRP049776)
ENST00000657282.1	Assembled from SLRseq reads (SRP049776)
ENST00000660368.1	Assembled from SLRseq reads (SRP049776)
ENST00000507492.5	GENCODE experimental pipeline
ENST00000438480.7	MANE_select
ENST00000438480.7	NP_001036155
ENST00000510580.1	not organism-supported
ENST00000382774.8	MANE_select
ENST00000668606.1	Assembled from SLRseq reads (SRP049776)
ENST00000340083.6	MANE_select
ENST00000507039.5	GENCODE experimental pipeline
ENST00000650182.1	LR annotation
ENST00000650182.1	MANE_select
ENST00000602641.5	not best-in-genome evidence
ENST00000505702.1	GENCODE experimental pipeline
ENST00000508619.1	GENCODE experimental pipeline
ENST00000330055.7	MANE_select
ENST00000296358.5	MANE_select
ENST00000254742.6	MGC13159
ENST00000382753.5	MANE_select
ENST00000343470.9	FLJ20425
ENST00000343470.9	MANE_select
ENST00000513174.1	alternative 5' UTR
ENST00000337872.9	MANE_select
ENST00000502918.1	alternative 5' UTR
ENST00000513555.5	alternative 5' UTR
ENST00000505246.5	alternative 5' UTR
ENST00000506380.5	alternative 5' UTR
ENST00000433139.6	alternative 5' UTR
ENST00000504171.1	alternative 5' UTR
ENST00000505286.5	GENCODE experimental pipeline
ENST00000306200.7	MANE_select
ENST00000507908.5	alternative 5' UTR
ENST00000664571.1	Assembled from SLRseq reads (SRP049776)
ENST00000663324.1	Assembled from SLRseq reads (SRP049776)
ENST00000507244.6	Assembled from SLRseq reads (SRP049776)
ENST00000664283.1	Assembled from SLRseq reads (SRP049776)
ENST00000656969.1	Assembled from SLRseq reads (SRP049776)
ENST00000670162.1	Assembled from SLRseq reads (SRP049776)
ENST00000608184.2	Assembled from SLRseq reads (SRP049776)
ENST00000659678.1	Assembled from SLRseq reads (SRP049776)
ENST00000653097.1	Assembled from SLRseq reads (SRP049776)
ENST00000499430.7	Assembled from SLRseq reads (SRP049776)
ENST00000512438.6	Assembled from SLRseq reads (SRP049776)
ENST00000670249.1	Assembled from SLRseq reads (SRP049776)
ENST00000665126.1	Assembled from SLRseq reads (SRP049776)
ENST00000669065.1	Assembled from SLRseq reads (SRP049776)
ENST00000667824.1	Assembled from SLRseq reads (SRP049776)
ENST00000655855.1	Assembled from SLRseq reads (SRP049776)
ENST00000624794.1	confirm experimentally
ENST00000662851.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652410.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000382723.5	CAGE supported TSS
ENST00000382723.5	LR annotation
ENST00000382723.5	MANE_select
ENST00000307746.9	MANE_select
ENST00000506508.1	GENCODE experimental pipeline
ENST00000282908.10	MANE_select
ENST00000505296.1	GENCODE experimental pipeline
ENST00000344408.10	MANE_select
ENST00000264956.11	MANE_select
ENST00000509451.1	GENCODE experimental pipeline
ENST00000324989.12	MANE_select
ENST00000409021.9	MANE_select
ENST00000409831.5	FLJ42728
ENST00000409831.5	alternative 5' UTR
ENST00000669245.1	Assembled from SLRseq reads (SRP049776)
ENST00000503569.5	alternative 5' UTR
ENST00000226760.5	CAGE supported TSS
ENST00000226760.5	LR annotation
ENST00000226760.5	MANE_select
ENST00000661896.1	Assembled from SLRseq reads (SRP049776)
ENST00000665800.1	Assembled from SLRseq reads (SRP049776)
ENST00000650929.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000335585.9	Isoform 2
ENST00000382599.9	MANE_select
ENST00000382599.9	overlapping uORF
ENST00000515571.5	Isoform 3
ENST00000504248.5	GENCODE experimental pipeline
ENST00000285599.8	Isoform 1
ENST00000285599.8	MANE_select
ENST00000505907.1	Isoform 2
ENST00000647523.2	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000667300.1	Assembled from SLRseq reads (SRP049776)
ENST00000656634.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654965.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662111.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000307533.10	LOC93622
ENST00000296370.4	MANE_select
ENST00000320848.7	MANE_select
ENST00000320776.5	MANE_select
ENST00000666330.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000508423.1	alternative 5' UTR
ENST00000307659.6	MANE_select
ENST00000444368.1	alternative 5' UTR
ENST00000409757.9	MANE_select
ENST00000427736.1	alternative 5' UTR
ENST00000410031.5	GENCODE experimental pipeline
ENST00000451522.6	NP_001106834
ENST00000664676.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000441093.1	QC splicing correct
ENST00000310085.6	FLJ90575
ENST00000310085.6	MANE_select
ENST00000310074.8	Isoform 1
ENST00000310074.8	MANE_select
ENST00000512388.1	Isoform 2
ENST00000515646.1	Isoform 3
ENST00000264954.5	MANE_select
ENST00000663544.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000319098.7	MANE_select
ENST00000319098.7	there is BIG transcription
ENST00000669561.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000512594.5	Actin-binding LIM protein
ENST00000512594.5	long polyA tail annotated in cDNA
ENST00000447017.7	MANE_select
ENST00000447017.7	NP_001123555
ENST00000514025.5	Actin-binding LIM protein 9bp missing
ENST00000545242.6	CAGE supported TSS
ENST00000407564.7	NP_115808
ENST00000505872.5	NP_001123558
ENST00000245105.8	MANE_select
ENST00000507123.1	two thirds of EST is missing from alignment probably due to the presence of tandem repeats
ENST00000457650.6	alternative 5' UTR
ENST00000507891.1	QC splicing correct
ENST00000508641.1	GENCODE experimental pipeline
ENST00000512966.1	GENCODE experimental pipeline
ENST00000307358.7	MANE_select
ENST00000661538.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661538.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000671202.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657851.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657733.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000503186.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660291.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661956.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653648.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000509453.1	GENCODE experimental pipeline
ENST00000658537.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000356406.10	MANE_select
ENST00000503233.5	alternative 5' UTR
ENST00000532937.1	QC splicing correct
ENST00000513449.6	GENCODE experimental pipeline
ENST00000389737.5	MANE_select
ENST00000389737.5	NP_689757.2
ENST00000511149.1	GENCODE experimental pipeline
ENST00000511366.2	GENCODE experimental pipeline
ENST00000660284.1	Assembled from SLRseq reads (SRP049776)
ENST00000503981.1	alternative 5' UTR
ENST00000503448.1	GENCODE experimental pipeline
ENST00000503448.1	alternative 5' UTR
ENST00000382487.5	MANE_select
ENST00000360986.9	MANE_select
ENST00000514043.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000400677.5	MANE_select
ENST00000659603.1	Assembled from SLRseq reads (SRP049776)
ENST00000666840.1	Assembled from SLRseq reads (SRP049776)
ENST00000662683.1	Assembled from SLRseq reads (SRP049776)
ENST00000664986.1	Assembled from SLRseq reads (SRP049776)
ENST00000668176.1	Assembled from SLRseq reads (SRP049776)
ENST00000670802.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000671426.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000512047.2	not best-in-genome evidence
ENST00000417945.1	MANE_select
ENST00000457736.1	MANE_select
ENST00000415041.1	MANE_select
ENST00000429667.1	MANE_select
ENST00000456464.2	MANE_select
ENST00000456464.2	NP_001243823.2
ENST00000511568.1	MANE_select
ENST00000504209.1	MANE_select
ENST00000515566.1	MANE_select
ENST00000506151.1	MANE_select
ENST00000506414.1	MANE_select
ENST00000511280.1	MANE_select
ENST00000504481.1	MANE_select
ENST00000509271.1	MANE_select
ENST00000509660.1	MANE_select
ENST00000507227.1	MANE_select
ENST00000515574.1	MANE_select
ENST00000504543.1	MANE_select
ENST00000511681.1	MANE_select
ENST00000504104.1	MANE_select
ENST00000508324.1	QC splicing correct
ENST00000653847.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000264784.8	MANE_select
ENST00000513129.1	alternative 5' UTR
ENST00000304374.4	MANE_select
ENST00000504249.1	GENCODE experimental pipeline
ENST00000503493.1	GENCODE experimental pipeline
ENST00000499869.7	MANE_select
ENST00000326756.4	MANE_select
ENST00000507515.1	alternative 5' UTR
ENST00000663264.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000226951.11	MANE_select
ENST00000635390.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000002596.6	MANE_select
ENST00000514690.5	alternative 5' UTR
ENST00000510712.1	alternative 5' UTR
ENST00000662830.1	Assembled from SLRseq reads (SRP049776)
ENST00000670155.1	Assembled from SLRseq reads (SRP049776)
ENST00000656610.1	Assembled from SLRseq reads (SRP049776)
ENST00000658506.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667921.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667921.1	GENCODE experimental pipeline
ENST00000670126.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661922.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666219.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656855.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667170.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668521.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669764.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668630.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664952.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653495.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658916.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668579.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666239.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653019.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656929.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663239.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670288.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658796.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654289.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661777.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670997.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662348.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000509244.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669564.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656429.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653229.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671103.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658637.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669014.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663860.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663535.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654143.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665315.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659726.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656636.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000510639.1	GENCODE experimental pipeline
ENST00000655077.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667212.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000505386.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000505386.2	GENCODE experimental pipeline
ENST00000657988.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667495.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000506899.1	QC splicing correct
ENST00000511649.5	GENCODE experimental pipeline
ENST00000330852.10	MANE_select
ENST00000504644.1	GENCODE experimental pipeline
ENST00000660753.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000382438.6	MANE_select
ENST00000040738.10	KIAA1327
ENST00000040738.10	MANE_select
ENST00000507943.1	GENCODE experimental pipeline
ENST00000669061.1	Assembled from SLRseq reads (SRP049776)
ENST00000503532.1	QC splicing correct
ENST00000657663.1	Assembled from SLRseq reads (SRP049776)
ENST00000658596.1	Assembled from SLRseq reads (SRP049776)
ENST00000654462.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000514401.1	GENCODE experimental pipeline
ENST00000538197.7	MANE_select
ENST00000295297.4	NP_001128642
ENST00000444304.3	MANE_select
ENST00000512702.6	align_id:3695995|asmbl_186160
ENST00000676337.1	align_id:3696001|asmbl_186166
ENST00000503292.6	CAGE supported TSS
ENST00000424120.6	MANE_select
ENST00000424120.6	align_id:3695961|asmbl_186126
ENST00000424120.6	alternative 5' UTR
ENST00000503658.2	alternative 5' UTR
ENST00000674945.1	CAGE supported TSS
ENST00000506643.5	align_id:3695965|asmbl_186130
ENST00000652443.1	CAGE supported TSS
ENST00000652443.1	align_id:1351032|asmbl_70935
ENST00000652443.1	pacbio_cs_merged_multi
ENST00000651385.1	CAGE supported TSS
ENST00000651385.1	align_id:3695977|asmbl_186142
ENST00000650860.2	align_id:3695975|asmbl_186140
ENST00000675619.1	align_id:3695994|asmbl_186159
ENST00000675768.1	align_id:3695987|asmbl_186152
ENST00000341285.8	MANE_select
ENST00000512066.5	GENCODE experimental pipeline
ENST00000503196.5	GENCODE experimental pipeline
ENST00000509314.5	GENCODE experimental pipeline
ENST00000509314.5	alternative 5' UTR
ENST00000510802.5	alternative 5' UTR
ENST00000507899.1	GENCODE experimental pipeline
ENST00000515679.1	alternative 5' UTR
ENST00000512855.5	alternative 5' UTR
ENST00000515430.5	alternative 5' UTR
ENST00000505260.5	alternative 5' UTR
ENST00000503617.1	alternative 5' UTR
ENST00000422728.3	MANE_select
ENST00000265016.9	MANE_select
ENST00000226279.8	MANE_select
ENST00000382333.2	MANE_select
ENST00000259989.7	MANE_select
ENST00000503884.5	GENCODE experimental pipeline
ENST00000447510.7	CAGE supported TSS
ENST00000447510.7	MANE_select
ENST00000447510.7	alternative 5' UTR
ENST00000508167.5	alternative 5' UTR
ENST00000508322.1	alternative 5' UTR
ENST00000508940.1	alternative 5' UTR
ENST00000514967.5	alternative 5' UTR
ENST00000514693.5	GENCODE experimental pipeline
ENST00000512304.2	dotter required to determine structure
ENST00000666747.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000405303.7	MANE_select
ENST00000670315.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000572816.1	NMD likely if extended
ENST00000515064.5	GENCODE experimental pipeline
ENST00000304523.10	MANE_select
ENST00000507464.5	GENCODE experimental pipeline
ENST00000504189.1	QC splicing correct
ENST00000657619.1	Assembled from SLRseq reads (SRP049776)
ENST00000659226.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000281243.10	MANE_select
ENST00000511148.2	MANE_select
ENST00000226299.9	MANE_select
ENST00000606142.5	CAGE supported TSS
ENST00000652378.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000511010.2	Assembled from SLRseq reads (SRP049776)
ENST00000237380.12	MANE_select
ENST00000503945.2	GENCODE experimental pipeline
ENST00000499786.4	QC splicing correct
ENST00000265018.4	MANE_select
ENST00000382247.6	FLJ20280
ENST00000382247.6	MANE_select
ENST00000251496.7	MANE_select
ENST00000326877.8	Isoform 3
ENST00000512376.2	not organism-supported
ENST00000652661.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000669321.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669511.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661892.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000655810.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000504154.6	MANE_select
ENST00000503837.5	QC splicing correct
ENST00000508824.1	GENCODE experimental pipeline
ENST00000515882.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000510700.5	GENCODE experimental pipeline
ENST00000502374.5	GENCODE experimental pipeline
ENST00000503585.6	MANE_select
ENST00000511160.5	GENCODE experimental pipeline
ENST00000514292.5	GENCODE experimental pipeline
ENST00000502938.5	GENCODE experimental pipeline
ENST00000509625.1	GENCODE experimental pipeline
ENST00000382152.7	MANE_select
ENST00000382152.7	QC splicing correct
ENST00000382152.7	non canonical conserved
ENST00000382148.7	NP_001030175
ENST00000447367.6	QC splicing correct
ENST00000509207.1	alternative 5' UTR
ENST00000382149.9	CAGE supported TSS
ENST00000515786.2	QC splicing correct
ENST00000659675.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668733.1	Assembled from SLRseq reads (SRP049776)
ENST00000511835.1	GENCODE experimental pipeline
ENST00000510705.3	not organism-supported
ENST00000665391.1	Assembled from SLRseq reads (SRP049776)
ENST00000665861.1	Assembled from SLRseq reads (SRP049776)
ENST00000334304.10	MANE_select
ENST00000506346.1	GENCODE experimental pipeline
ENST00000659942.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655325.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655182.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660103.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000506425.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653008.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652324.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000654546.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666412.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667179.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655768.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663529.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660296.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661585.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660370.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653872.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667156.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658109.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654588.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662431.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653188.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666579.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000503017.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665739.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671537.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663348.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663487.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658079.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000264867.7	MANE_select
ENST00000503714.1	GENCODE experimental pipeline
ENST00000336812.5	MANE_select
ENST00000653514.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000598411.1	alternative 5' UTR
ENST00000598411.1	overlapping uORF
ENST00000382120.4	MANE_select
ENST00000635206.2	MANE_select
ENST00000389609.8	GENCODE experimental pipeline
ENST00000382114.9	MANE_select
ENST00000512108.1	GENCODE experimental pipeline
ENST00000382103.7	MANE_select
ENST00000510415.1	GENCODE experimental pipeline
ENST00000264864.8	MANE_select
ENST00000302874.9	MANE_select
ENST00000315368.8	MANE_select
ENST00000505991.1	alternative 5' UTR
ENST00000645788.1	CAGE supported TSS
ENST00000513204.5	alternative 5' UTR
ENST00000382051.8	MANE_select
ENST00000503434.5	alternative 5' UTR
ENST00000507530.1	alternative 5' UTR
ENST00000510033.2	not organism-supported
ENST00000399878.8	MANE_select
ENST00000510448.5	GENCODE experimental pipeline
ENST00000507618.1	GENCODE experimental pipeline
ENST00000514321.1	GENCODE experimental pipeline
ENST00000510880.1	alternative 5' UTR
ENST00000513691.1	alternative 5' UTR
ENST00000514872.1	alternative 5' UTR
ENST00000510905.1	GENCODE experimental pipeline
ENST00000515764.2	not organism-supported
ENST00000506197.2	NP_001138904
ENST00000514384.1	GENCODE experimental pipeline
ENST00000512351.5	alternative 5' UTR
ENST00000342295.6	alternative 5' UTR
ENST00000506956.5	alternative 5' UTR
ENST00000512671.6	alternative 5' UTR
ENST00000345843.8	upstream ATG
ENST00000514807.5	QC splicing correct
ENST00000514807.5	alternative 5' UTR
ENST00000348160.9	alternative 5' UTR
ENST00000681856.1	alternative 5' UTR
ENST00000355476.8	MANE_select
ENST00000355476.8	NP_056958
ENST00000680511.1	alternative 5' UTR
ENST00000681484.1	alternative 5' UTR
ENST00000505958.6	alternative 5' UTR
ENST00000514730.5	alternative 5' UTR
ENST00000507574.5	alternative 5' UTR
ENST00000514675.5	alternative 5' UTR
ENST00000515573.5	alternative 5' UTR
ENST00000681260.1	alternative 5' UTR
ENST00000681093.1	alternative 5' UTR
ENST00000504423.2	alternative 5' UTR
ENST00000511546.5	alternative 5' UTR
ENST00000514656.3	GENCODE experimental pipeline
ENST00000681264.1	alternative 5' UTR
ENST00000504938.1	alternative 5' UTR
ENST00000295589.4	MANE_select
ENST00000264866.9	MANE_select
ENST00000477474.3	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000467011.6	GENCODE experimental pipeline
ENST00000467087.7	MANE_select
ENST00000473519.5	GENCODE experimental pipeline
ENST00000663047.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667363.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000382007.1	FLJ45721
ENST00000666494.1	Assembled from SLRseq reads (SRP049776)
ENST00000653771.1	Assembled from SLRseq reads (SRP049776)
ENST00000668598.1	Assembled from SLRseq reads (SRP049776)
ENST00000651324.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000507759.5	GENCODE experimental pipeline
ENST00000665628.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652166.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000654257.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670928.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671072.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660946.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663795.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669584.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658038.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665367.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664506.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669260.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652805.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659444.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654464.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658572.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000543491.2	NP_115832.1
ENST00000507864.1	GENCODE experimental pipeline
ENST00000515292.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660077.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658339.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000510420.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655959.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662669.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657576.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659613.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000513211.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660373.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665582.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655951.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667252.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652083.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000652083.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000659320.1	Assembled from SLRseq reads (SRP049776)
ENST00000664015.1	Assembled from SLRseq reads (SRP049776)
ENST00000653925.1	Assembled from SLRseq reads (SRP049776)
ENST00000664054.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651621.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000505326.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000505326.6	Assembled from SLRseq reads (SRP049776)
ENST00000668324.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000506650.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661224.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661069.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659663.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662736.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665965.1	Assembled from SLRseq reads (SRP049776)
ENST00000513843.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658479.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000514877.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656859.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655242.1	Assembled from RACEseq reads
ENST00000303965.9	MANE_select
ENST00000506189.1	alternative 5' UTR
ENST00000654185.1	Assembled from SLRseq reads (SRP049776)
ENST00000639862.2	MANE_select
ENST00000662117.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000510597.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000510597.6	QC splicing correct
ENST00000505298.5	QC splicing correct
ENST00000655716.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000515128.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661752.1	Assembled from SLRseq reads (SRP049776)
ENST00000665248.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667203.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650887.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650887.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000624352.1	confirm experimentally
ENST00000661239.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653492.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653492.1	GENCODE experimental pipeline
ENST00000662885.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665773.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671043.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662283.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660466.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655789.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000501725.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652451.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000508199.5	GENCODE experimental pipeline
ENST00000654824.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000309447.6	MANE_select
ENST00000309447.6	QC splicing correct
ENST00000381980.9	MANE_select
ENST00000284437.6	alternative 5' UTR
ENST00000662093.1	Assembled from SLRseq reads (SRP049776)
ENST00000454158.7	MANE_select
ENST00000454158.7	alternative 3' UTR
ENST00000381967.9	MANE_select
ENST00000510084.2	not organism-supported
ENST00000261439.9	MANE_select
ENST00000443855.5	GENCODE experimental pipeline
ENST00000504686.2	MANE_select
ENST00000670635.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000624530.1	confirm experimentally
ENST00000653888.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669996.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653380.1	Assembled from SLRseq reads (SRP049776)
ENST00000655930.1	Assembled from SLRseq reads (SRP049776)
ENST00000440181.6	Assembled from SLRseq reads (SRP049776)
ENST00000665526.1	Assembled from SLRseq reads (SRP049776)
ENST00000669212.1	Assembled from SLRseq reads (SRP049776)
ENST00000665931.1	Assembled from SLRseq reads (SRP049776)
ENST00000668586.1	Assembled from SLRseq reads (SRP049776)
ENST00000661050.1	Assembled from SLRseq reads (SRP049776)
ENST00000668230.1	Assembled from SLRseq reads (SRP049776)
ENST00000670431.1	Assembled from SLRseq reads (SRP049776)
ENST00000504219.2	Assembled from SLRseq reads (SRP049776)
ENST00000505240.5	FLJ13197
ENST00000669118.1	Assembled from SLRseq reads (SRP049776)
ENST00000620339.5	Assembled from SLRseq reads (SRP049776)
ENST00000436901.3	Assembled from SLRseq reads (SRP049776)
ENST00000666430.1	Assembled from SLRseq reads (SRP049776)
ENST00000515436.3	QC splicing correct
ENST00000261438.10	MANE_select
ENST00000308973.9	MANE_select
ENST00000502321.5	GENCODE experimental pipeline
ENST00000308979.7	MANE_select
ENST00000308979.7	genebuild_only_MANE
ENST00000505940.1	alternative 5' UTR
ENST00000515861.5	alternative 5' UTR
ENST00000506146.5	alternative 5' UTR
ENST00000508364.1	alternative 5' UTR
ENST00000508254.5	alternative 5' UTR
ENST00000514655.1	alternative 5' UTR
ENST00000358869.5	LOC92689
ENST00000358869.5	MANE_select
ENST00000381938.4	MANE_select
ENST00000344606.6	GENCODE experimental pipeline
ENST00000668468.1	Assembled from SLRseq reads (SRP049776)
ENST00000654813.1	Assembled from SLRseq reads (SRP049776)
ENST00000399820.8	MANE_select
ENST00000502718.1	GENCODE experimental pipeline
ENST00000349703.7	MANE_select
ENST00000257408.5	MANE_select
ENST00000645496.2	alternative 5' UTR
ENST00000295955.14	CAGE supported TSS
ENST00000295955.14	MANE_select
ENST00000449470.6	alternative 5' UTR
ENST00000508595.6	upstream ATG
ENST00000509519.5	NP_001265521.1
ENST00000640888.2	MANE_select
ENST00000424936.6	NP_001265520.1
ENST00000513731.6	GENCODE experimental pipeline
ENST00000340169.7	NP_919433.1
ENST00000515061.1	QC splicing correct
ENST00000638430.1	alternative 3' UTR
ENST00000316423.11	MANE_select
ENST00000506179.5	alternative 5' UTR
ENST00000515021.5	GENCODE experimental pipeline
ENST00000514106.5	alternative 5' UTR
ENST00000509391.1	alternative 5' UTR
ENST00000505698.1	alternative 5' UTR
ENST00000510490.1	alternative 5' UTR
ENST00000662380.1	Assembled from SLRseq reads (SRP049776)
ENST00000295958.10	MANE_select
ENST00000505729.1	alternative 5' UTR
ENST00000662034.1	Assembled from SLRseq reads (SRP049776)
ENST00000667934.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667934.1	Assembled from SLRseq reads (SRP049776)
ENST00000657228.1	Assembled from SLRseq reads (SRP049776)
ENST00000659162.1	Assembled from SLRseq reads (SRP049776)
ENST00000666863.1	Assembled from SLRseq reads (SRP049776)
ENST00000261427.10	MANE_select
ENST00000303538.13	MANE_select
ENST00000513798.1	GENCODE experimental pipeline
ENST00000261435.11	MANE_select
ENST00000515550.1	GENCODE experimental pipeline
ENST00000652416.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000505618.5	alternative 5' UTR
ENST00000507851.5	alternative 5' UTR
ENST00000508513.5	alternative 5' UTR
ENST00000503941.5	alternative 5' UTR
ENST00000381799.10	MANE_select
ENST00000511121.5	alternative 5' UTR
ENST00000515422.1	GENCODE experimental pipeline
ENST00000310169.3	MANE_select
ENST00000295971.12	MANE_select
ENST00000295971.12	alternative 5' UTR
ENST00000515053.5	alternative 5' UTR
ENST00000513473.5	alternative 5' UTR
ENST00000514782.5	alternative 5' UTR
ENST00000507180.5	alternative 5' UTR
ENST00000511598.5	alternative 5' UTR
ENST00000511902.5	alternative 5' UTR
ENST00000505220.1	alternative 5' UTR
ENST00000653270.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000316607.5	FLJ14001
ENST00000381782.7	FLJ14001
ENST00000381782.7	MANE_select
ENST00000508593.6	MANE_select
ENST00000504305.5	alternative 5' UTR
ENST00000510670.5	alternative 5' UTR
ENST00000514920.5	alternative 5' UTR
ENST00000513516.5	alternative 5' UTR
ENST00000508707.5	alternative 5' UTR
ENST00000508676.5	alternative 5' UTR
ENST00000503503.5	alternative 5' UTR
ENST00000514924.5	alternative 5' UTR
ENST00000503431.5	alternative 5' UTR
ENST00000284440.9	CCDS3462.1
ENST00000284440.9	MANE_select
ENST00000513024.5	alternative 5' UTR
ENST00000509638.5	alternative 5' UTR
ENST00000446625.6	alternative 5' UTR
ENST00000515847.1	QC splicing correct
ENST00000503057.6	MANE_select
ENST00000503057.6	alternative 5' UTR
ENST00000511496.5	alternative 5' UTR
ENST00000514096.5	GENCODE experimental pipeline
ENST00000514096.5	alternative 5' UTR
ENST00000509277.5	alternative 5' UTR
ENST00000509454.5	GENCODE experimental pipeline
ENST00000509454.5	alternative 5' UTR
ENST00000381753.8	alternative 5' UTR
ENST00000505705.1	GENCODE experimental pipeline
ENST00000669369.1	Assembled from SLRseq reads (SRP049776)
ENST00000506475.1	GENCODE experimental pipeline
ENST00000226382.4	MANE_select
ENST00000510602.1	GENCODE experimental pipeline
ENST00000670465.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000510772.1	GENCODE experimental pipeline
ENST00000660525.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000508448.5	alternative 5' UTR
ENST00000513702.5	alternative 5' UTR
ENST00000504986.6	MANE_select
ENST00000513558.1	GENCODE experimental pipeline
ENST00000333141.7	MANE_select
ENST00000264451.12	MANE_select
ENST00000502486.6	MANE_select
ENST00000502486.6	NP_997289
ENST00000504360.5	upstream_ATG-4
ENST00000663539.1	Assembled from RACEseq reads
ENST00000319234.5	MANE_select
ENST00000514372.5	alternative 5' UTR
ENST00000381668.9	MANE_select
ENST00000399770.3	MANE_select
ENST00000660388.1	Assembled from SLRseq reads (SRP049776)
ENST00000667550.1	Assembled from SLRseq reads (SRP049776)
ENST00000665455.1	Assembled from SLRseq reads (SRP049776)
ENST00000662371.1	Assembled from SLRseq reads (SRP049776)
ENST00000669927.1	Assembled from SLRseq reads (SRP049776)
ENST00000655512.1	Assembled from SLRseq reads (SRP049776)
ENST00000669690.1	Assembled from SLRseq reads (SRP049776)
ENST00000667096.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653214.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661768.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665941.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000509098.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663391.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663391.1	QC splicing correct
ENST00000655776.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668491.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000360029.4	MANE_select
ENST00000415895.8	confirm experimentally
ENST00000415895.8	downstream ATG
ENST00000415895.8	non canonical conserved
ENST00000510035.5	non canonical conserved
ENST00000281543.6	FLJ13220
ENST00000281543.6	MANE_select
ENST00000295448.8	MANE_select
ENST00000507917.5	GENCODE experimental pipeline
ENST00000295452.5	MANE_select
ENST00000381620.9	MANE_select
ENST00000510861.5	alternative 5' UTR
ENST00000514090.5	alternative 5' UTR
ENST00000356504.5	alternative 5' UTR
ENST00000507069.5	confirm experimentally
ENST00000514236.1	not organism-supported
ENST00000503806.5	alternative 5' UTR
ENST00000506961.5	alternative 5' UTR
ENST00000507460.1	confirm experimentally
ENST00000502455.2	Assembled from SLRseq reads (SRP049776)
ENST00000651612.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000396533.5	alternative 5' UTR
ENST00000355591.8	MANE_select
ENST00000505102.1	alternative 5' UTR
ENST00000264318.4	MANE_select
ENST00000502874.1	not organism-supported
ENST00000295454.8	MANE_select
ENST00000381571.6	MANE_select
ENST00000634784.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657862.1	Assembled from SLRseq reads (SRP049776)
ENST00000273859.8	MANE_select
ENST00000507889.1	tandem repeats in the last exon
ENST00000273857.9	MANE_select
ENST00000634948.2	Assembled from RACEseq reads
ENST00000656214.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000634611.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652844.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000507489.2	MANE_select
ENST00000507489.2	alternative 5' UTR
ENST00000508115.1	repeated sequence in the last exon
ENST00000295461.10	MANE_select
ENST00000402813.9	NP_001136036.1
ENST00000402813.9	alternative 5' UTR
ENST00000402813.9	upstream ATG
ENST00000514170.7	CAGE supported TSS
ENST00000514170.7	MANE_select
ENST00000514170.7	upstream ATG
ENST00000420489.7	alternative 5' UTR
ENST00000420489.7	upstream ATG
ENST00000504722.6	alternative 5' UTR
ENST00000504722.6	upstream ATG
ENST00000514520.6	alternative 5' UTR
ENST00000514520.6	upstream ATG
ENST00000513178.2	alternative 5' UTR
ENST00000513178.2	upstream ATG
ENST00000264316.9	MANE_select
ENST00000506073.1	GENCODE experimental pipeline
ENST00000381501.8	MANE_select
ENST00000264313.11	MANE_select
ENST00000273861.5	MANE_select
ENST00000652393.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000327939.4	MANE_select
ENST00000358350.9	MANE_select
ENST00000504654.5	alternative 5' UTR
ENST00000509122.5	alternative 5' UTR
ENST00000509664.5	alternative 5' UTR
ENST00000514981.5	alternative 5' UTR
ENST00000511662.5	alternative 5' UTR
ENST00000508996.5	alternative 5' UTR
ENST00000507210.5	alternative 5' UTR
ENST00000512236.5	alternative 5' UTR
ENST00000509164.5	alternative 5' UTR
ENST00000381473.7	alternative 5' UTR
ENST00000264312.12	MANE_select
ENST00000264312.12	Swissprot: Q9NX40-1
ENST00000444354.6	NM_001079840.1
ENST00000444354.6	NP_001073309
ENST00000510824.5	GENCODE experimental pipeline
ENST00000508293.5	alternative 5' UTR
ENST00000513391.2	alternative 5' UTR
ENST00000508329.1	GENCODE experimental pipeline
ENST00000508632.6	MANE_select
ENST00000381464.6	alternative 5' UTR
ENST00000226432.9	FLJ21511
ENST00000226432.9	MANE_select
ENST00000623090.1	confirm experimentally
ENST00000334635.10	MANE_select
ENST00000381431.10	MANE_select
ENST00000511875.1	GENCODE experimental pipeline
ENST00000295213.9	MANE_select
ENST00000419395.6	GENCODE experimental pipeline
ENST00000660768.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000441222.8	MANE_select
ENST00000564513.2	Assembled from SLRseq reads (SRP049776)
ENST00000653147.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653034.1	Assembled from SLRseq reads (SRP049776)
ENST00000514957.1	non canonical conserved
ENST00000651729.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000443173.6	FLJ37999
ENST00000443173.6	MANE_select
ENST00000443173.6	alternative 5' UTR
ENST00000248706.5	MANE_select
ENST00000401642.8	Isoform 1
ENST00000401642.8	MANE_select
ENST00000388940.8	Isoform 2
ENST00000503450.1	GENCODE experimental pipeline
ENST00000337488.11	MANE_select
ENST00000358575.9	NP_001128409.1
ENST00000306932.10	NP_001128410.1
ENST00000510668.1	not organism-supported
ENST00000504094.1	GENCODE experimental pipeline
ENST00000507166.5	An interstitial chromosomal deletion on 4q12 creates an in-frame fusion of human genes FIP1L1 and PDGFRA (platelet-derived growth factor receptor, alpha). The FIP1L1-PDGFRA fusion gene encodes a constitutively activated tyrosine kinase that joins the first 233 amino acids of FIP1L1 to the last 523 amino acids of PDGFRA. This gene fusion and chromosomal deletion is the cause of some forms of idiopathic hypereosinophilic syndrome (HES). This syndrome, recently reclassified as chronic eosinophilic leukemia (CEL), is responsive to treatment with tyrosine kinase inhibitors
ENST00000263925.8	MANE_select
ENST00000513421.5	QC splicing correct
ENST00000513421.5	alternative 5' UTR
ENST00000510143.1	alternative 5' UTR
ENST00000512247.5	alternative 5' UTR
ENST00000504299.5	alternative 5' UTR
ENST00000508112.1	not organism-supported
ENST00000512405.1	GENCODE experimental pipeline
ENST00000263921.8	MANE_select
ENST00000654316.1	Assembled from RACEseq reads
ENST00000326902.7	MANE_select
ENST00000503800.1	GENCODE experimental pipeline
ENST00000503800.1	not organism-supported
ENST00000257290.10	MANE_select
ENST00000503856.5	alternative 5' UTR
ENST00000504461.5	alternative 5' UTR
ENST00000512522.1	alternative 5' UTR
ENST00000288135.6	MANE_select
ENST00000663019.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660886.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000509711.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000263923.5	CAGE supported TSS
ENST00000263923.5	LR annotation
ENST00000263923.5	Trimmed to the highest cage peak in Zenbu & the strongest polyA site. cage tags = 34862 erb 5/10/17
ENST00000654019.1	Assembled from SLRseq reads (SRP049776)
ENST00000264228.9	MANE_select
ENST00000666009.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608136.1	nested 454 RNA-Seq supported
ENST00000381334.10	MANE_select
ENST00000513440.6	MANE_select
ENST00000513440.6	alternative 5' UTR
ENST00000381322.5	alternative 5' UTR
ENST00000506747.5	332 bp at the start of the cDNA don't align to genomic seuence
ENST00000295645.9	MANE_select
ENST00000264218.7	MANE_select
ENST00000636125.2	MANE_select
ENST00000381295.7	MANE_select
ENST00000381295.7	alternative 5' UTR
ENST00000668940.1	Assembled from RACEseq reads
ENST00000669835.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000257287.5	MANE_select
ENST00000629263.2	alternative 5' UTR
ENST00000504228.6	CAGE supported TSS
ENST00000503618.1	CAGE supported TSS
ENST00000651073.1	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000205214.11	MANE_select
ENST00000503808.5	GENCODE experimental pipeline
ENST00000264220.6	MANE_select
ENST00000514888.5	alternative 5' UTR
ENST00000505164.5	alternative 5' UTR
ENST00000512576.3	MANE_select
ENST00000512576.3	alternative 5' UTR
ENST00000510663.6	NP_001254651.1
ENST00000642900.1	CAGE supported TSS
ENST00000642900.1	LR annotation
ENST00000642900.1	MANE_select
ENST00000642900.1	upstream ATG
ENST00000640821.3	MANE_select
ENST00000512175.3	MANE_select
ENST00000337881.11	alternative 5' UTR
ENST00000503639.7	alternative 5' UTR
ENST00000553379.6	alternative 5' UTR
ENST00000381255.7	alternative 5' UTR
ENST00000317745.11	alternative 5' UTR
ENST00000555760.6	alternative 5' UTR
ENST00000556614.6	alternative 5' UTR
ENST00000556376.6	alternative 5' UTR
ENST00000420433.6	MANE_select
ENST00000420433.6	alternative 5' UTR
ENST00000508121.2	alternative 5' UTR
ENST00000506738.6	MANE_select
ENST00000309042.12	MANE_select
ENST00000675249.1	align_id:1351921|asmbl_71824
ENST00000264230.5	MANE_select
ENST00000450656.5	alternative 5' UTR
ENST00000441246.6	alternative 5' UTR
ENST00000433463.1	alternative 5' UTR
ENST00000314595.6	MANE_select
ENST00000314595.6	genebuild_only_MANE
ENST00000510355.1	only 577 bp out of 1103 of the EST aligned to genomic DNA
ENST00000295666.6	MANE_select
ENST00000508328.6	Assembled from SLRseq reads (SRP049776)
ENST00000667601.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000511330.1	GENCODE experimental pipeline
ENST00000661383.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664387.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000510956.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667013.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658472.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664465.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664541.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659557.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654508.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652645.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000508135.2	GENCODE experimental pipeline
ENST00000651343.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000508292.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000508292.2	GENCODE experimental pipeline
ENST00000656709.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653955.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662149.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669862.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669647.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000512911.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655838.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000514707.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665406.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670153.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660037.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664747.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671471.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656595.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000502668.2	QC splicing correct
ENST00000651732.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000652799.1	Assembled from SLRseq reads (SRP049776)
ENST00000509559.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655846.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000514591.5	NP_056051.2
ENST00000504135.5	QC splicing correct
ENST00000506704.5	QC splicing correct
ENST00000676649.1	compmerge.1373.pooled.chr4
ENST00000676649.1	pacbio_capture_seq
ENST00000507857.2	QC splicing correct
ENST00000658248.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000381210.8	MANE_select
ENST00000666578.1	Assembled from SLRseq reads (SRP049776)
ENST00000509932.2	CAGE supported TSS
ENST00000659694.1	Assembled from SLRseq reads (SRP049776)
ENST00000665259.1	Assembled from SLRseq reads (SRP049776)
ENST00000670052.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670052.1	Assembled from SLRseq reads (SRP049776)
ENST00000652257.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000665528.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657399.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667167.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649562.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000613740.5	MANE_select
ENST00000662838.1	Assembled from SLRseq reads (SRP049776)
ENST00000660927.1	Assembled from RACEseq reads
ENST00000652065.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000273853.11	MANE_select
ENST00000265404.7	MANE_select
ENST00000623308.1	confirm experimentally
ENST00000322244.10	Isoform 1
ENST00000322244.10	MANE_select
ENST00000514261.1	not organism-supported
ENST00000505673.2	not organism-supported
ENST00000660649.1	Assembled from SLRseq reads (SRP049776)
ENST00000654961.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654961.1	Assembled from SLRseq reads (SRP049776)
ENST00000656992.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656992.1	Assembled from SLRseq reads (SRP049776)
ENST00000500538.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665294.1	Assembled from SLRseq reads (SRP049776)
ENST00000666396.1	Assembled from SLRseq reads (SRP049776)
ENST00000667140.1	Assembled from SLRseq reads (SRP049776)
ENST00000664183.1	Assembled from SLRseq reads (SRP049776)
ENST00000660972.1	Assembled from SLRseq reads (SRP049776)
ENST00000663060.1	Assembled from SLRseq reads (SRP049776)
ENST00000665498.1	Assembled from SLRseq reads (SRP049776)
ENST00000226413.5	Isoform 1
ENST00000226413.5	MANE_select
ENST00000420975.2	Isoform 2
ENST00000283916.11	MANE_select
ENST00000508048.6	Isoform 2
ENST00000508048.6	MANE_select
ENST00000334830.11	Isoform 1
ENST00000513536.5	GENCODE experimental pipeline
ENST00000513536.5	QC splicing correct
ENST00000356291.3	MANE_select
ENST00000332644.6	MANE_select
ENST00000344157.9	MANE_select
ENST00000305363.9	MANE_select
ENST00000338206.6	MANE_select
ENST00000265403.12	MANE_select
ENST00000265403.12	non canonical polymorphism
ENST00000265403.12	rs2942857
ENST00000458688.2	non canonical polymorphism
ENST00000251566.9	MANE_select
ENST00000305231.12	MANE_select
ENST00000508661.5	GENCODE experimental pipeline
ENST00000446444.2	MANE_select
ENST00000335568.10	MANE_select
ENST00000305107.7	MANE_select
ENST00000510114.1	alternative 5' UTR
ENST00000604629.6	MANE_select
ENST00000286604.8	GENCODE experimental pipeline
ENST00000505512.1	alternative 5' UTR
ENST00000310613.8	MANE_select
ENST00000510821.1	alternative 5' UTR
ENST00000512870.1	GENCODE experimental pipeline
ENST00000226444.4	MANE_select
ENST00000246891.9	MANE_select
ENST00000381060.2	NP_001009181.1
ENST00000246895.9	MANE_select
ENST00000530128.5	alternative 3' UTR
ENST00000673563.1	MANE_select
ENST00000511674.5	alternative 3' UTR
ENST00000246896.8	MANE_select
ENST00000502441.2	QC splicing correct
ENST00000502294.5	alternative 5' UTR
ENST00000344526.10	MANE_select
ENST00000317987.6	MANE_select
ENST00000273936.6	MANE_select
ENST00000273936.6	NMD exception
ENST00000226460.5	MANE_select
ENST00000504825.5	alternative 5' UTR
ENST00000304915.8	MANE_select
ENST00000399575.7	MANE_select
ENST00000505411.5	alternative 5' UTR
ENST00000304887.6	MANE_select
ENST00000339336.9	MANE_select
ENST00000322937.10	MANE_select
ENST00000396073.4	MANE_select
ENST00000472597.1	CAGE supported TSS
ENST00000472903.5	QC splicing correct
ENST00000254801.9	MANE_select
ENST00000510437.5	alternative 5' UTR
ENST00000470866.1	alternative 5' UTR
ENST00000254803.4	MANE_select
ENST00000514898.1	alternative 5' UTR
ENST00000503876.5	alternative 5' UTR
ENST00000417478.6	NP_001124181.1
ENST00000381006.8	MANE_select
ENST00000513597.5	GENCODE experimental pipeline
ENST00000254799.11	MANE_select
ENST00000502323.5	GENCODE experimental pipeline
ENST00000514161.5	GENCODE experimental pipeline
ENST00000309395.7	MANE_select
ENST00000509617.1	alternative 5' UTR
ENST00000286648.10	MANE_select
ENST00000264485.11	CAGE supported TSS
ENST00000264485.11	MANE_select
ENST00000639096.1	CAGE supported TSS
ENST00000273951.13	MANE_select
ENST00000506245.1	alternative 5' UTR
ENST00000308744.11	upstream ATG
ENST00000286657.10	MANE_select
ENST00000507544.3	MANE_select
ENST00000507544.3	NAGNAG splice site
ENST00000421792.2	CCDS3554
ENST00000421792.2	GENCODE experimental pipeline
ENST00000358602.9	MANE_select
ENST00000558247.5	NAGNAG splice site
ENST00000561029.1	not organism-supported
ENST00000415165.6	splice donor of exon 2 wobble
ENST00000295897.9	MANE_select
ENST00000503124.5	GENCODE experimental pipeline
ENST00000395792.7	MANE_select
ENST00000226359.2	GENCODE experimental pipeline
ENST00000226355.5	MANE_select
ENST00000307439.10	MANE_select
ENST00000307407.8	MANE_select
ENST00000226317.10	MANE_select
ENST00000503446.1	GENCODE experimental pipeline
ENST00000226524.4	MANE_select
ENST00000395761.4	MANE_select
ENST00000296029.4	MANE_select
ENST00000296028.4	MANE_select
ENST00000296027.5	MANE_select
ENST00000669992.1	Assembled from SLRseq reads (SRP049776)
ENST00000296026.4	MANE_select
ENST00000653804.1	Assembled from SLRseq reads (SRP049776)
ENST00000508487.3	MANE_select
ENST00000359107.9	alternative 5' UTR
ENST00000465255.5	GENCODE experimental pipeline
ENST00000490128.1	GENCODE experimental pipeline
ENST00000413830.6	MANE_select
ENST00000244869.3	MANE_select
ENST00000395748.8	MANE_select
ENST00000502307.1	not organism-supported
ENST00000395743.8	MANE_select
ENST00000670521.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000307428.7	MANE_select
ENST00000563602.1	QC splicing correct
ENST00000512706.5	GENCODE experimental pipeline
ENST00000513909.5	121749
ENST00000506261.5	alternative 5' UTR
ENST00000504218.5	alternative 5' UTR
ENST00000311638.7	MANE_select
ENST00000502620.1	GENCODE experimental pipeline
ENST00000514480.1	alternative 5' UTR
ENST00000311623.9	MANE_select
ENST00000307465.9	GENCODE experimental pipeline
ENST00000307465.9	MANE_select
ENST00000677794.1	Snaptron_GTEX
ENST00000677794.1	intropolis_filtered
ENST00000679329.1	SLRseq_align_id:3698802|asmbl_188967_PASA_cluster_16656
ENST00000677171.1	SLRseq_align_id:3698777|asmbl_188942_PASA_cluster_16656
ENST00000677171.1	alternative 5' UTR
ENST00000678123.1	SLRseq_align_id:3698766|asmbl_188931_PASA_cluster_16656
ENST00000678123.1	alternative 5' UTR
ENST00000678578.1	SLRseq_align_id:3698774|asmbl_188939_PASA_cluster_16656
ENST00000678578.1	alternative 5' UTR
ENST00000677876.1	SLRseq_align_id:3698781|asmbl_188946_PASA_cluster_16656
ENST00000677876.1	alternative 5' UTR
ENST00000676839.1	SLRseq_align_id:3698785|asmbl_188950_PASA_cluster_16656
ENST00000676839.1	alternative 5' UTR
ENST00000678265.1	SLRseq_align_id:3698772|asmbl_188937_PASA_cluster_16656
ENST00000678265.1	alternative 5' UTR
ENST00000678265.1	intropolis_filtered
ENST00000677192.1	SLRseq_align_id:3698789|asmbl_188954_PASA_cluster_16656
ENST00000678552.1	SLRseq_align_id:3698765|asmbl_188930_PASA_cluster_16656
ENST00000678552.1	alternative 5' UTR
ENST00000676584.1	SLRseq_align_id:3698773|asmbl_188938_PASA_cluster_16656
ENST00000676584.1	alternative 5' UTR
ENST00000678329.1	SLRseq_align_id:3698793|asmbl_188958_PASA_cluster_16656
ENST00000677889.1	SLRseq_align_id:3698791|asmbl_188956_PASA_cluster_16656
ENST00000677003.1	SLRseq_align_id:3698796|asmbl_188961_PASA_cluster_16656
ENST00000676974.1	SLRseq_align_id:3698771|asmbl_188936_PASA_cluster_16656
ENST00000676974.1	alternative 5' UTR
ENST00000678244.1	SLRseq_align_id:3698795|asmbl_188960_PASA_cluster_16656
ENST00000678447.1	SLRseq_align_id:3698788|asmbl_188953_PASA_cluster_16656
ENST00000678875.1	SLRseq-align_id:3698787|asmbl_188952_PASA_cluster_16656
ENST00000677583.1	SLRseq_align_id:3698784|asmbl_188949_PASA_cluster_16656
ENST00000677583.1	alternative 5' UTR
ENST00000677606.1	SLRseq_align_id:3698769|asmbl_188934_PASA_cluster_16656
ENST00000677606.1	alternative 5' UTR
ENST00000678798.1	SLRseq_align_id:3698776|asmbl_188941_PASA_cluster_16656
ENST00000678798.1	alternative 5' UTR
ENST00000677620.1	SLRseq_align_id:3698770|asmbl_188935_PASA_cluster_16656
ENST00000677620.1	alternative 5' UTR
ENST00000679281.1	SLRseq_align_id:3698786|asmbl_188951_PASA_cluster_16656
ENST00000679281.1	alternative 5' UTR
ENST00000677333.1	SLRseq_align_id:3698768|asmbl_188933_PASA_cluster_16656
ENST00000677333.1	alternative 5' UTR
ENST00000676470.1	SLRseq_align_id:3698783|asmbl_188948_PASA_cluster_16656
ENST00000678971.1	SLRseq_align_id:3698767|asmbl_188932_PASA_cluster_16656
ENST00000678971.1	alternative 5' UTR
ENST00000677265.1	SLRseq_align_id:3698782|asmbl_188947_PASA_cluster_16656
ENST00000677265.1	alternative 5' UTR
ENST00000678122.1	SLRseq_align_id:3698778|asmbl_188943_PASA_cluster_16656
ENST00000678122.1	alternative 5' UTR
ENST00000678100.1	SLRseq_align_id:3698764|asmbl_188929_PASA_cluster_16656
ENST00000678100.1	alternative 5' UTR
ENST00000678062.1	SLRseq_align_id:3698762|asmbl_188927_PASA_cluster_16656
ENST00000678062.1	alternative 5' UTR
ENST00000676666.1	SLRseq_align_id:3698780|asmbl_188945_PASA_cluster_16656
ENST00000676666.1	alternative 5' UTR
ENST00000395719.7	CCDS3571.1
ENST00000395719.7	alternative 5' UTR
ENST00000359707.9	MANE_select
ENST00000677060.1	SLRseq_align_id:3698810|asmbl_188975_PASA_cluster_16656
ENST00000677060.1	alternative 5' UTR
ENST00000679294.1	SLRseq_align_id:3698800|asmbl_188965_PASA_cluster_16656
ENST00000677201.1	SLR-seq_TB0000034
ENST00000677201.1	alternative 5' UTR
ENST00000677952.1	SLRseq_align_id:3698811|asmbl_188976_PASA_cluster_16656
ENST00000678273.1	alternative 5' UTR
ENST00000678273.1	pacbio_align_id:1352244|asmbl_72147_PASA_cluster_16991
ENST00000677125.1	alternative 5' UTR
ENST00000677125.1	pacbio_align_id:1352242|asmbl_72145_PASA_cluster_16991
ENST00000357854.7	CCDS3572.1
ENST00000677566.1	alternative 5' UTR
ENST00000677566.1	pacbio_align_id:1352249|asmbl_72152_PASA_cluster_16991
ENST00000677162.1	alternative 5' UTR
ENST00000677162.1	pacbio_align_id:1352248|asmbl_72151_PASA_cluster_16991
ENST00000677970.1	alternative 5' UTR
ENST00000677970.1	slr-seq_hsbn_lib6
ENST00000678932.1	Snaptron_GTEX
ENST00000678932.1	intropolis_filtered
ENST00000677520.1	intropolis_filtered
ENST00000677426.1	intropolis_filtered
ENST00000678642.1	Snaptron_GTEX
ENST00000678642.1	intropolis_filtered
ENST00000510902.2	intropolis_filtered
ENST00000678958.1	intropolis_filtered
ENST00000676761.1	intropolis_filtered
ENST00000677278.1	Snaptron_GTEX
ENST00000677278.1	intropolis_filtered
ENST00000676493.1	Snaptron_GTEX
ENST00000503660.5	alternative 5' UTR
ENST00000677597.1	Snaptron_GTEX
ENST00000677597.1	intropolis_filtered
ENST00000676926.1	Snaptron_GTEX
ENST00000676926.1	intropolis_filtered
ENST00000677733.1	Snaptron_GTEX
ENST00000677733.1	intropolis_filtered
ENST00000678670.1	Snaptron_GTEX
ENST00000678670.1	intropolis_filtered
ENST00000515457.6	Snaptron_GTEX
ENST00000515457.6	intropolis_filtered
ENST00000509100.6	intropolis_filtered
ENST00000507745.5	alternative 5' UTR
ENST00000511146.5	alternative 5' UTR
ENST00000507252.5	alternative 5' UTR
ENST00000677489.1	alternative 5' UTR
ENST00000677489.1	intropolis_filtered
ENST00000509561.6	alternative 5' UTR
ENST00000509561.6	intropolis_filtered
ENST00000677145.1	alternative 5' UTR
ENST00000677145.1	intropolis_filtered
ENST00000676702.1	Snaptron_GTEX
ENST00000676702.1	alternative 5' UTR
ENST00000676702.1	intropolis_filtered
ENST00000508510.6	Snaptron_GTEX
ENST00000508510.6	alternative 5' UTR
ENST00000508510.6	intropolis_filtered
ENST00000499709.3	Snaptron_GTEX
ENST00000499709.3	alternative 5' UTR
ENST00000499709.3	intropolis_filtered
ENST00000511868.6	Snaptron_GTEX
ENST00000511868.6	alternative 5' UTR
ENST00000511868.6	intropolis_filtered
ENST00000678908.1	intropolis_filtered
ENST00000676485.1	intropolis_filtered
ENST00000678389.1	intropolis_filtered
ENST00000676641.1	intropolis_filtered
ENST00000678843.1	intropolis_filtered
ENST00000677888.1	intropolis_filtered
ENST00000678732.1	intropolis_filtered
ENST00000677515.1	Snaptron_GTEX
ENST00000677515.1	intropolis_filtered
ENST00000676579.1	Snaptron_GTEX
ENST00000676579.1	intropolis_filtered
ENST00000679325.1	intropolis_filtered
ENST00000676689.1	Snaptron_GTEX
ENST00000677094.1	SLRseq_align_id:3698818|asmbl_188983_PASA_cluster_16656
ENST00000678620.1	Snaptron_GTEX
ENST00000678620.1	intropolis_filtered
ENST00000678326.1	Snaptron_GTEX
ENST00000678326.1	intropolis_filtered
ENST00000676580.1	Snaptron_GTEX
ENST00000676580.1	intropolis_filtered
ENST00000514213.7	MANE_select
ENST00000511880.7	non canonical polymorphism
ENST00000286719.12	MANE_select
ENST00000652700.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000286733.9	MANE_select
ENST00000513045.6	GENCODE experimental pipeline
ENST00000356260.10	MANE_select
ENST00000264888.6	MANE_select
ENST00000513353.5	alternative 5' UTR
ENST00000510669.5	QC splicing correct
ENST00000341029.9	alternative 5' UTR
ENST00000513122.5	alternative 5' UTR
ENST00000504914.5	alternative 5' UTR
ENST00000355810.9	MANE_select
ENST00000510423.1	alternative 5' UTR
ENST00000306602.3	MANE_select
ENST00000306621.8	MANE_select
ENST00000503860.1	alternative 5' UTR
ENST00000264883.8	MANE_select
ENST00000514987.5	GENCODE experimental pipeline
ENST00000651366.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000264896.8	MANE_select
ENST00000452464.6	GENCODE experimental pipeline
ENST00000510197.5	GENCODE experimental pipeline
ENST00000515589.1	GENCODE experimental pipeline
ENST00000424749.7	MANE_select
ENST00000670253.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000515604.5	NP_001229868.1
ENST00000651133.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000237642.7	MANE_select
ENST00000434846.2	GENCODE experimental pipeline
ENST00000296043.7	MANE_select
ENST00000466541.1	GENCODE experimental pipeline
ENST00000484236.1	GENCODE experimental pipeline
ENST00000666924.1	Assembled from SLRseq reads (SRP049776)
ENST00000660459.1	Assembled from SLRseq reads (SRP049776)
ENST00000669577.1	Assembled from SLRseq reads (SRP049776)
ENST00000668373.1	Assembled from SLRseq reads (SRP049776)
ENST00000666047.1	Assembled from SLRseq reads (SRP049776)
ENST00000452412.1	GENCODE experimental pipeline
ENST00000334306.4	MANE_select
ENST00000264893.11	MANE_select
ENST00000510641.5	GENCODE experimental pipeline
ENST00000505788.5	GENCODE experimental pipeline
ENST00000504637.5	alternative 5' UTR
ENST00000512778.1	GENCODE experimental pipeline
ENST00000512778.1	alternative 5' UTR
ENST00000506731.5	GENCODE experimental pipeline
ENST00000506731.5	QC splicing correct
ENST00000237654.9	MANE_select
ENST00000515468.1	GENCODE experimental pipeline
ENST00000505609.5	alternative 5' UTR
ENST00000513774.1	alternative 5' UTR
ENST00000316355.10	MANE_select
ENST00000502280.5	alternative 5' UTR
ENST00000395640.5	alternative 5' UTR
ENST00000512918.5	alternative 5' UTR
ENST00000649644.1	upstream ATG
ENST00000515506.6	alternative 5' UTR
ENST00000512485.6	alternative 5' UTR
ENST00000515441.2	alternative 5' UTR
ENST00000515441.2	upstream ATG
ENST00000315567.13	MANE_select
ENST00000512123.4	MANE_select
ENST00000512123.4	NP_079350.5
ENST00000325942.10	NP_001159605.1
ENST00000503570.6	GENCODE experimental pipeline
ENST00000264908.11	MANE_select
ENST00000512373.5	alternative 5' UTR
ENST00000514171.5	alternative 5' UTR
ENST00000508214.1	alternative 5' UTR
ENST00000668669.1	Assembled from SLRseq reads (SRP049776)
ENST00000503259.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000503259.6	Assembled from SLRseq reads (SRP049776)
ENST00000671622.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671622.1	Assembled from SLRseq reads (SRP049776)
ENST00000507802.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656991.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656991.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000656991.1	Assembled from SLRseq reads (SRP049776)
ENST00000663250.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000504675.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000514130.6	Assembled from SLRseq reads (SRP049776)
ENST00000512322.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000512322.2	Assembled from SLRseq reads (SRP049776)
ENST00000654343.1	Assembled from SLRseq reads (SRP049776)
ENST00000654792.1	Assembled from SLRseq reads (SRP049776)
ENST00000503539.6	Assembled from SLRseq reads (SRP049776)
ENST00000670146.1	Assembled from SLRseq reads (SRP049776)
ENST00000652918.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667455.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667455.1	Assembled from SLRseq reads (SRP049776)
ENST00000653916.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666953.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661741.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660086.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000502613.3	MANE_select
ENST00000502613.3	NP_942595.1
ENST00000502613.3	Swiss-Prot isoform: Q9NSY1.2
ENST00000512733.5	MANE_select
ENST00000669293.1	Assembled from SLRseq reads (SRP049776)
ENST00000671503.1	Assembled from SLRseq reads (SRP049776)
ENST00000509088.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670100.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658852.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658852.1	Assembled from SLRseq reads (SRP049776)
ENST00000651041.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000653314.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000286794.5	MANE_select
ENST00000358842.5	MANE_select
ENST00000664228.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661529.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654276.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654687.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670961.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000508174.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656371.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000515544.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668018.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661950.1	Assembled from SLRseq reads (SRP049776)
ENST00000671684.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000506460.1	QC splicing correct
ENST00000403729.7	MANE_select
ENST00000679571.1	align_id:3699244|asmbl_189409
ENST00000680913.1	align_id:3699245|asmbl_189410
ENST00000681710.1	align_id:3699241|asmbl_189406
ENST00000681115.1	align_id:3699243|asmbl_189408
ENST00000653209.1	Assembled from SLRseq reads (SRP049776)
ENST00000504452.5	alternative 5' UTR
ENST00000515013.5	alternative 5' UTR
ENST00000415738.3	MANE_select
ENST00000456523.3	in frame 5' stop prior to the ATG
ENST00000358105.8	MANE_select
ENST00000282701.4	MANE_select
ENST00000663090.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000509081.5	confirm experimentally
ENST00000264400.7	MANE_select
ENST00000638048.1	confirm experimentally
ENST00000504863.1	GENCODE experimental pipeline
ENST00000508294.1	NMD likely if extended
ENST00000313899.12	MANE_select
ENST00000507010.5	alternative 5' UTR
ENST00000503822.1	alternative 5' UTR
ENST00000295470.10	MANE_select
ENST00000507721.5	CAGE supported TSS
ENST00000602300.5	CAGE supported TSS
ENST00000349655.8	CAGE supported TSS
ENST00000273920.8	MANE_select
ENST00000515780.6	NP_001073975.1
ENST00000449862.7	MANE_select
ENST00000449862.7	NP_001073975.1
ENST00000449862.7	alternative 5' UTR
ENST00000508701.5	GENCODE experimental pipeline
ENST00000454948.3	alternative 5' UTR
ENST00000651054.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000667708.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000319540.9	MANE_select
ENST00000395310.7	MANE_select
ENST00000355196.6	alternative 5' UTR
ENST00000515062.5	GENCODE experimental pipeline
ENST00000512664.5	GENCODE experimental pipeline
ENST00000514326.5	alternative 5' UTR
ENST00000513323.5	alternative 5' UTR
ENST00000503210.5	alternative 5' UTR
ENST00000505434.5	alternative 5' UTR
ENST00000507676.5	alternative 5' UTR
ENST00000506495.5	alternative 5' UTR
ENST00000507051.1	alternative 5' UTR
ENST00000302236.10	MANE_select
ENST00000302236.10	in frame 5' stop codon prior to ATG, o'laps CpG island
ENST00000340417.8	MANE_select
ENST00000442461.6	alternative 5' UTR
ENST00000446851.6	alternative 5' UTR
ENST00000505397.1	alternative 5' UTR
ENST00000509748.1	QC splicing correct
ENST00000509093.5	GENCODE experimental pipeline
ENST00000510801.5	GENCODE experimental pipeline
ENST00000264389.7	MANE_select
ENST00000511653.1	GENCODE experimental pipeline
ENST00000652524.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000311507.9	MANE_select
ENST00000411416.6	alternative 5' UTR
ENST00000509973.5	GENCODE experimental pipeline
ENST00000505406.5	alternative 5' UTR
ENST00000426923.2	alternative 5' UTR
ENST00000515670.1	GENCODE experimental pipeline
ENST00000647002.2	MANE_select
ENST00000311461.7	CAGE supported TSS
ENST00000311412.10	MANE_select
ENST00000405413.6	alternative 5' UTR
ENST00000295488.8	MANE_select
ENST00000510985.1	GENCODE experimental pipeline
ENST00000295491.9	MANE_select
ENST00000509970.5	GENCODE experimental pipeline
ENST00000509970.5	alternative 3' UTR
ENST00000321945.12	MANE_select
ENST00000611288.4	confirm experimentally
ENST00000611288.4	non canonical TEC
ENST00000264409.5	MANE_select
ENST00000264409.5	alternative 5' UTR
ENST00000657959.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668493.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000295886.5	MANE_select
ENST00000295887.6	MANE_select
ENST00000295888.9	MANE_select
ENST00000505923.5	QC splicing correct
ENST00000509172.1	alternative 5' UTR
ENST00000502713.1	alternative 5' UTR
ENST00000510449.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000652207.2	Assembled from SLRseq reads (SRP049776)
ENST00000651773.2	Assembled from SLRseq reads (SRP049776)
ENST00000652474.2	Assembled from SLRseq reads (SRP049776)
ENST00000652481.2	Assembled from SLRseq reads (SRP049776)
ENST00000651404.2	Assembled from SLRseq reads (SRP049776)
ENST00000624443.5	Assembled from SLRseq reads (SRP049776)
ENST00000652101.2	Assembled from SLRseq reads (SRP049776)
ENST00000652312.2	Assembled from SLRseq reads (SRP049776)
ENST00000652490.2	Assembled from SLRseq reads (SRP049776)
ENST00000318186.8	Assembled from SLRseq reads (SRP049776)
ENST00000652652.2	Assembled from SLRseq reads (SRP049776)
ENST00000651772.2	Assembled from SLRseq reads (SRP049776)
ENST00000395184.6	MANE_select
ENST00000512201.5	alternative 5' UTR
ENST00000503917.1	QC splicing correct
ENST00000638225.1	NP_620446.1
ENST00000641462.2	MANE_select
ENST00000642060.1	alternative 3' UTR
ENST00000642060.1	alternative 5' UTR
ENST00000641208.1	alternative 5' UTR
ENST00000641803.1	alternative 5' UTR
ENST00000564854.2	alternative 3' UTR
ENST00000564854.2	alternative 5' UTR
ENST00000641983.1	alternative 5' UTR
ENST00000642035.1	alternative 3' UTR
ENST00000641410.1	alternative 3' UTR
ENST00000641051.1	alternative 5' UTR
ENST00000641952.1	alternative 5' UTR
ENST00000641341.1	alternative 5' UTR
ENST00000638313.1	alternative 5' UTR
ENST00000641718.1	NP_001304996.1
ENST00000641902.1	alternative 5' UTR
ENST00000641553.1	NP_001304996.1
ENST00000641553.1	alternative 5' UTR
ENST00000641943.1	alternative 5' UTR
ENST00000641657.1	alternative 5' UTR
ENST00000639242.1	alternative 5' UTR
ENST00000642015.1	alternative 5' UTR
ENST00000641050.1	alternative 5' UTR
ENST00000641217.1	alternative 5' UTR
ENST00000642032.1	alternative 5' UTR
ENST00000641647.1	alternative 5' UTR
ENST00000641634.1	alternative 3' UTR
ENST00000641634.1	alternative 5' UTR
ENST00000641283.1	alternative 5' UTR
ENST00000641854.1	alternative 3' UTR
ENST00000641297.1	alternative 5' UTR
ENST00000639972.2	alternative 5' UTR
ENST00000642006.1	alternative 5' UTR
ENST00000641405.1	alternative 3' UTR
ENST00000641724.1	alternative 5' UTR
ENST00000641047.1	upstream ATG
ENST00000641317.1	alternative 3' UTR
ENST00000641317.1	alternative 5' UTR
ENST00000359221.8	alternative 5' UTR
ENST00000395157.9	alternative 5' UTR
ENST00000641435.1	alternative 3' UTR
ENST00000641435.1	alternative 5' UTR
ENST00000395166.6	alternative 5' UTR
ENST00000641607.1	upstream ATG
ENST00000641537.1	alternative 5' UTR
ENST00000641823.1	alternative 5' UTR
ENST00000641430.1	alternative 5' UTR
ENST00000640970.1	alternative 5' UTR
ENST00000641762.1	alternative 5' UTR
ENST00000641207.1	alternative 5' UTR
ENST00000641041.1	alternative 3' UTR
ENST00000641041.1	alternative 5' UTR
ENST00000642038.1	alternative 5' UTR
ENST00000640490.1	alternative 5' UTR
ENST00000641221.1	alternative 5' UTR
ENST00000641237.1	alternative 5' UTR
ENST00000640858.1	alternative 5' UTR
ENST00000641555.1	alternative 5' UTR
ENST00000641253.1	alternative 5' UTR
ENST00000641379.1	alternative 5' UTR
ENST00000361569.8	alternative 3' UTR
ENST00000361569.8	alternative 5' UTR
ENST00000395160.9	alternative 5' UTR
ENST00000641313.1	alternative 5' UTR
ENST00000641737.1	alternative 5' UTR
ENST00000641989.1	alternative 5' UTR
ENST00000641391.1	alternative 5' UTR
ENST00000641862.1	alternative 5' UTR
ENST00000641110.1	alternative 5' UTR
ENST00000641831.1	alternative 5' UTR
ENST00000641609.1	alternative 5' UTR
ENST00000641157.1	alternative 5' UTR
ENST00000642009.1	alternative 5' UTR
ENST00000641274.1	alternative 5' UTR
ENST00000513186.7	alternative 5' UTR
ENST00000641653.1	alternative 3' UTR
ENST00000641653.1	alternative 5' UTR
ENST00000639234.1	alternative 5' UTR
ENST00000641656.1	alternative 3' UTR
ENST00000639175.1	alternative 5' UTR
ENST00000641911.1	alternative 5' UTR
ENST00000641306.1	alternative 3' UTR
ENST00000641306.1	alternative 5' UTR
ENST00000515400.3	alternative 5' UTR
ENST00000641531.1	alternative 3' UTR
ENST00000515650.2	alternative 5' UTR
ENST00000641595.1	alternative 3' UTR
ENST00000641595.1	alternative 5' UTR
ENST00000641072.1	alternative 5' UTR
ENST00000641873.1	alternative 5' UTR
ENST00000642019.1	alternative 5' UTR
ENST00000642019.1	upstream ATG
ENST00000641203.1	alternative 3' UTR
ENST00000641203.1	alternative 5' UTR
ENST00000472236.5	alternative 3' UTR
ENST00000511167.6	alternative 3' UTR
ENST00000512564.6	alternative 5' UTR
ENST00000641826.1	alternative 5' UTR
ENST00000641629.1	alternative 5' UTR
ENST00000512017.7	alternative 5' UTR
ENST00000511328.5	alternative 5' UTR
ENST00000641227.1	alternative 5' UTR
ENST00000502302.6	alternative 5' UTR
ENST00000639989.2	alternative 5' UTR
ENST00000641855.1	alternative 5' UTR
ENST00000641798.1	alternative 3' UTR
ENST00000641798.1	alternative 5' UTR
ENST00000642049.1	NMD likely if extended
ENST00000640445.1	alternative 5' UTR
ENST00000641061.1	alternative 5' UTR
ENST00000638946.2	alternative 5' UTR
ENST00000642048.1	alternative 5' UTR
ENST00000503911.5	QC splicing correct
ENST00000503911.5	alternative 5' UTR
ENST00000641016.1	alternative 5' UTR
ENST00000640527.1	alternative 5' UTR
ENST00000509464.7	alternative 5' UTR
ENST00000512046.2	alternative 5' UTR
ENST00000641408.1	alternative 5' UTR
ENST00000641116.1	alternative 5' UTR
ENST00000641675.1	alternative 5' UTR
ENST00000641782.1	alternative 5' UTR
ENST00000638867.2	alternative 5' UTR
ENST00000411767.7	MANE_select
ENST00000502971.5	GENCODE experimental pipeline
ENST00000507902.5	alternative 5' UTR
ENST00000273905.7	MANE_select
ENST00000505535.1	NMD likely if extended
ENST00000505535.1	QC splicing correct
ENST00000295898.8	MANE_select
ENST00000506308.5	alternative 5' UTR
ENST00000504008.1	alternative 5' UTR
ENST00000504371.1	NMD likely if extended
ENST00000395146.8	NP_001160165.1
ENST00000544085.6	NP_001300888.1
ENST00000273963.10	MANE_select
ENST00000498875.6	GENCODE experimental pipeline
ENST00000425278.6	GENCODE experimental pipeline
ENST00000512111.1	alternative 5' UTR
ENST00000328546.5	MANE_select
ENST00000508163.1	QC splicing correct
ENST00000358290.9	MANE_select
ENST00000508413.1	NMD likely if extended
ENST00000302174.9	MANE_select
ENST00000512216.5	alternative 5' UTR
ENST00000282470.11	MANE_select
ENST00000509407.5	alternative 5' UTR
ENST00000434434.5	alternative 5' UTR
ENST00000535835.5	alternative 5' UTR
ENST00000512317.5	alternative 5' UTR
ENST00000543631.5	alternative 5' UTR
ENST00000458304.2	alternative 5' UTR
ENST00000651931.1	LR annotation
ENST00000651931.1	MANE_select
ENST00000339673.11	MANE_select
ENST00000226284.7	MANE_select
ENST00000497649.6	GENCODE experimental pipeline
ENST00000511670.5	GENCODE experimental pipeline
ENST00000662475.1	Assembled from SLRseq reads (SRP049776)
ENST00000508233.5	27873
ENST00000395080.8	MANE_select
ENST00000237596.7	MANE_select
ENST00000508588.5	GENCODE experimental pipeline
ENST00000650821.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000237612.8	MANE_select
ENST00000505480.6	CAGE supported TSS
ENST00000505480.6	alternative 5' UTR
ENST00000503830.2	CAGE supported TSS
ENST00000503830.2	alternative 5' UTR
ENST00000608933.6	MANE_select
ENST00000506423.1	NMD likely if extended
ENST00000505022.1	alternative 5' UTR
ENST00000509340.1	alternative 5' UTR
ENST00000652965.1	Assembled from SLRseq reads (SRP049776)
ENST00000661338.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000500009.3	Assembled from SLRseq reads (SRP049776)
ENST00000661337.1	Assembled from SLRseq reads (SRP049776)
ENST00000662571.1	Assembled from SLRseq reads (SRP049776)
ENST00000667541.1	Assembled from SLRseq reads (SRP049776)
ENST00000664130.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000264346.12	MANE_select
ENST00000264350.8	MANE_select
ENST00000527353.2	CAGE supported TSS
ENST00000527353.2	MANE_select
ENST00000527353.2	upstream uORF
ENST00000273968.5	MANE_select
ENST00000431413.5	alternative 5' UTR
ENST00000402738.6	MANE_select
ENST00000422770.5	alternative 5' UTR
ENST00000426683.5	alternative 5' UTR
ENST00000452979.5	alternative 5' UTR
ENST00000504994.1	QC splicing correct
ENST00000323061.7	CAGE supported TSS
ENST00000323061.7	LR annotation
ENST00000323061.7	MANE_select
ENST00000652855.1	Assembled from SLRseq reads (SRP049776)
ENST00000667757.1	Assembled from SLRseq reads (SRP049776)
ENST00000659507.1	Assembled from SLRseq reads (SRP049776)
ENST00000668537.1	Assembled from SLRseq reads (SRP049776)
ENST00000264344.10	MANE_select
ENST00000264344.10	NP_055698
ENST00000603357.3	MANE_select
ENST00000609438.2	MANE_select
ENST00000333209.4	alternative 5' UTR
ENST00000659878.1	Assembled from SLRseq reads (SRP049776)
ENST00000659714.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000673949.1	CAGE supported TSS
ENST00000394991.8	MANE_select
ENST00000336904.7	alternative 5' UTR
ENST00000673766.1	CAGE supported TSS
ENST00000394986.5	alternative 5' UTR
ENST00000508895.5	alternative 5' UTR
ENST00000506244.5	alternative 5' UTR
ENST00000611107.1	based on experimental evidence in Beyer et al. (2008) Neurogenetics 9. PMID: 17955272
ENST00000506691.1	alternative 5' UTR
ENST00000264790.7	CAGE supported TSS
ENST00000264790.7	LR annotation
ENST00000264790.7	MANE_select
ENST00000508372.1	GENCODE experimental pipeline
ENST00000664731.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000515111.1	GENCODE experimental pipeline
ENST00000623567.1	confirm experimentally
ENST00000505511.1	QC splicing correct
ENST00000662528.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000624435.1	confirm experimentally
ENST00000282020.9	CAGE supported TSS
ENST00000282020.9	MANE_select
ENST00000502570.1	QC splicing correct
ENST00000306011.6	MANE_select
ENST00000359052.8	alternative 5' UTR
ENST00000354268.9	MANE_select
ENST00000510105.5	QC splicing correct
ENST00000509418.1	GENCODE experimental pipeline
ENST00000295256.10	MANE_select
ENST00000667612.1	Assembled from RACEseq reads
ENST00000504489.3	GENCODE experimental pipeline
ENST00000317968.9	MANE_select
ENST00000514743.5	GENCODE experimental pipeline
ENST00000510795.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000510795.2	GENCODE experimental pipeline
ENST00000515059.6	CAGE supported TSS
ENST00000515059.6	LR annotation
ENST00000515059.6	MANE_select
ENST00000506363.5	alternative 5' UTR
ENST00000509540.6	alternative 3' UTR
ENST00000512312.5	alternative 5' UTR
ENST00000440890.7	CAGE supported TSS
ENST00000440890.7	LR annotation
ENST00000440890.7	downstream ATG
ENST00000502683.6	NMD likely if extended
ENST00000264568.8	alternative 5' UTR
ENST00000394931.1	alternative 5' UTR
ENST00000453304.6	MANE_select
ENST00000506749.5	GENCODE experimental pipeline
ENST00000295266.6	MANE_select
ENST00000659448.1	Assembled from SLRseq reads (SRP049776)
ENST00000295268.4	MANE_select
ENST00000651895.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000669093.1	Assembled from SLRseq reads (SRP049776)
ENST00000408927.8	MANE_select
ENST00000512857.5	NMD likely if extended
ENST00000515187.5	NMD likely if extended
ENST00000503745.1	NMD likely if extended
ENST00000305798.8	MANE_select
ENST00000515287.5	alternative 5' UTR
ENST00000511651.5	alternative 5' UTR
ENST00000450253.7	MANE_select
ENST00000515638.5	QC splicing correct
ENST00000504432.5	GENCODE experimental pipeline
ENST00000504472.1	GENCODE experimental pipeline
ENST00000583654.1	non canonical TEC
ENST00000665661.1	Assembled from SLRseq reads (SRP049776)
ENST00000296411.11	MANE_select
ENST00000510133.5	GENCODE experimental pipeline
ENST00000510133.5	QC splicing correct
ENST00000514051.1	GENCODE experimental pipeline
ENST00000512659.5	QC splicing correct
ENST00000502386.1	QC splicing correct
ENST00000670724.1	Assembled from RACEseq reads
ENST00000671105.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000661393.1	Assembled from SLRseq reads (SRP049776)
ENST00000510764.1	QC splicing correct
ENST00000508393.5	GENCODE experimental pipeline
ENST00000265512.12	MANE_select
ENST00000505590.5	alternative 5' UTR
ENST00000512499.5	alternative 5' UTR
ENST00000503944.5	GENCODE experimental pipeline
ENST00000504581.1	GENCODE experimental pipeline
ENST00000394899.6	MANE_select
ENST00000508558.1	GENCODE experimental pipeline
ENST00000209668.3	MANE_select
ENST00000305046.13	MANE_select
ENST00000515683.6	MANE_select
ENST00000505942.2	NMD likely if extended
ENST00000326581.9	MANE_select
ENST00000503257.1	QC splicing correct
ENST00000394877.7	alternative 5' UTR
ENST00000394876.7	MANE_select
ENST00000394876.7	alternative 5' UTR
ENST00000455368.6	alternative 5' UTR
ENST00000514547.1	alternative 5' UTR
ENST00000457717.6	alternative 5' UTR
ENST00000457717.6	upstream uORF
ENST00000511610.6	upstream uORF
ENST00000505094.6	upstream uORF
ENST00000511045.6	GENCODE experimental pipeline
ENST00000511045.6	upstream ATG
ENST00000265517.10	CAGE supported TSS
ENST00000265517.10	MANE_select
ENST00000512369.2	MANE_select
ENST00000499666.7	MANE_select
ENST00000442697.7	MANE_select
ENST00000493110.1	GENCODE experimental pipeline
ENST00000493110.1	QC splicing correct
ENST00000296417.6	MANE_select
ENST00000651623.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000507494.6	Assembled from SLRseq reads (SRP049776)
ENST00000501976.7	Assembled from SLRseq reads (SRP049776)
ENST00000666876.1	Assembled from SLRseq reads (SRP049776)
ENST00000515026.1	not organism-supported
ENST00000273990.6	MANE_select
ENST00000502763.1	alternative 5' UTR
ENST00000513992.1	alternative 5' UTR
ENST00000296420.9	MANE_select
ENST00000652064.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000657311.1	Assembled from SLRseq reads (SRP049776)
ENST00000394854.8	MANE_select
ENST00000525819.1	alternative 5' UTR
ENST00000529296.1	alternative 5' UTR
ENST00000322953.9	MANE_select
ENST00000652546.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000424970.6	NP_001128619.1
ENST00000394833.6	alternative 5' UTR
ENST00000356736.5	MANE_select
ENST00000502883.5	QC splicing correct
ENST00000512915.5	QC splicing correct
ENST00000226574.9	LR annotation
ENST00000226574.9	MANE_select
ENST00000511926.5	alternative 5' UTR
ENST00000507079.5	alternative 5' UTR
ENST00000505458.5	alternative 5' UTR
ENST00000505458.5	confirm experimentally
ENST00000505458.5	non canonical polymorphism
ENST00000509165.1	alternative 5' UTR
ENST00000647097.2	LR annotation
ENST00000647097.2	MANE_select
ENST00000453744.7	MANE_select
ENST00000394801.8	alternative 5' UTR
ENST00000394803.9	alternative 5' UTR
ENST00000343106.9	NP_871621.1
ENST00000321805.11	alternative 5' UTR
ENST00000338145.7	alternative 5' UTR
ENST00000349311.12	alternative 5' UTR
ENST00000504211.5	alternative 5' UTR
ENST00000357194.10	NP_871622.1
ENST00000505207.5	alternative 5' UTR
ENST00000502404.5	alternative 5' UTR
ENST00000508476.5	alternative 5' UTR
ENST00000508238.5	alternative 5' UTR
ENST00000502690.5	alternative 5' UTR
ENST00000508249.1	alternative 5' UTR
ENST00000652530.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000652530.1	n_id:1352939|asmbl_72842
ENST00000273986.10	CAGE supported TSS
ENST00000273986.10	LR annotation
ENST00000273986.10	MANE_select
ENST00000503643.1	CAGE supported TSS
ENST00000503643.1	GENCODE experimental pipeline
ENST00000296422.12	MANE_select
ENST00000512651.2	QC splicing correct
ENST00000510559.1	alternative 5' UTR
ENST00000362026.7	alternative 5' UTR
ENST00000394785.9	3' End extended. See REC-84. Based on RNAseq, polyA seq data (peak from NCBI), and RNAseq reads, especially SRR1660805.42103.1
ENST00000394785.9	MANE_select
ENST00000394785.9	NP_849155.2
ENST00000503103.5	GENCODE experimental pipeline
ENST00000503818.1	alternative 5' UTR
ENST00000296424.9	MANE_select
ENST00000504285.5	alternative 5' UTR
ENST00000509245.1	alternative 5' UTR
ENST00000265148.9	CAGE supported TSS
ENST00000265148.9	MANE_select
ENST00000265148.9	NAGNAG splice site
ENST00000668077.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656104.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656681.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666142.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000510200.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657481.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664815.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669559.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664047.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652710.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000662651.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668906.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671183.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656698.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669002.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000304883.3	MANE_select
ENST00000653472.1	Assembled from SLRseq reads (SRP049776)
ENST00000510505.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671148.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000394767.3	MANE_select
ENST00000664466.1	Assembled from SLRseq reads (SRP049776)
ENST00000655215.1	Assembled from SLRseq reads (SRP049776)
ENST00000515127.1	QC splicing correct
ENST00000515649.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671069.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000380013.9	MANE_select
ENST00000514870.1	alternative 5' UTR
ENST00000341695.10	MANE_select
ENST00000432483.6	NP_789842.2
ENST00000502596.5	GENCODE experimental pipeline
ENST00000420470.3	FLJ43963
ENST00000420470.3	MANE_select
ENST00000420470.3	The genes for FLJ20184 and FLJ43963 have been merged because there are some human and pig (Sus scrofa) readthrough ESTs, and there is a homologue gene with the identical Pfam domain organisation (FLJ41603; ENSG00000183111 in human chromosome 5; Swiss-Prot A1IGU5.2)
ENST00000506828.1	not organism-supported
ENST00000508036.2	not organism-supported
ENST00000394735.5	alternative 5' UTR
ENST00000340139.10	MANE_select
ENST00000451321.6	DKFZp468P1223
ENST00000451321.6	alternative 5' UTR
ENST00000503746.5	alternative 5' UTR
ENST00000420368.6	alternative 5' UTR
ENST00000416543.5	alternative 5' UTR
ENST00000433009.1	alternative 5' UTR
ENST00000515819.1	alternative 5' UTR
ENST00000512828.1	alternative 5' UTR
ENST00000394730.7	NP_079027.2
ENST00000515279.6	MANE_select
ENST00000515279.6	alternative 5' UTR
ENST00000510865.5	alternative 5' UTR
ENST00000509336.5	alternative 5' UTR
ENST00000394728.4	alternative 5' UTR
ENST00000394728.4	non canonical TEC
ENST00000504304.5	GENCODE experimental pipeline
ENST00000379987.7	MANE_select
ENST00000394708.7	MANE_select
ENST00000394708.7	alternative 5' UTR
ENST00000509532.5	alternative 5' UTR
ENST00000509862.5	alternative 5' UTR
ENST00000507696.1	alternative 5' UTR
ENST00000510207.5	alternative 5' UTR
ENST00000672337.1	alternative 5' UTR
ENST00000672341.1	CAGE supported TSS
ENST00000672341.1	LR annotation
ENST00000672341.1	MANE_select
ENST00000672341.1	upstream ATG
ENST00000671868.1	alternative 5' UTR
ENST00000672003.1	alternative 5' UTR
ENST00000672003.1	upstream ATG
ENST00000673123.1	upstream ATG
ENST00000672328.1	alternative 5' UTR
ENST00000672911.1	alternative 5' UTR
ENST00000672285.1	alternative 5' UTR
ENST00000671960.1	alternative 5' UTR
ENST00000673018.1	alternative 5' UTR
ENST00000638719.4	CAGE supported TSS
ENST00000638719.4	MANE_select
ENST00000638719.4	upstream ATG
ENST00000667859.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654498.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650850.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000285311.8	MANE_select
ENST00000265174.5	MANE_select
ENST00000359079.8	alternative 5' UTR
ENST00000506993.1	alternative 5' UTR
ENST00000394686.3	alternative 5' UTR
ENST00000503385.1	alternative 5' UTR
ENST00000668082.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668384.1	Assembled from RACEseq reads
ENST00000656249.1	Assembled from RACEseq reads
ENST00000513071.2	Assembled from SLRseq reads (SRP049776)
ENST00000656358.1	Assembled from SLRseq reads (SRP049776)
ENST00000658105.1	Assembled from SLRseq reads (SRP049776)
ENST00000332884.11	MANE_select
ENST00000508453.1	GENCODE experimental pipeline
ENST00000511742.1	alternative 3' UTR
ENST00000639013.1	NMD likely if extended
ENST00000309522.8	MANE_select
ENST00000638648.1	NMD likely if extended
ENST00000639784.1	alternative 3' UTR
ENST00000265165.6	MANE_select
ENST00000665040.1	Assembled from SLRseq reads (SRP049776)
ENST00000512637.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659790.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000512129.2	Assembled from SLRseq reads (SRP049776)
ENST00000394667.8	MANE_select
ENST00000361564.9	MANE_select
ENST00000510556.1	QC splicing correct
ENST00000651728.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000651728.2	Assembled from SLRseq reads (SRP049776)
ENST00000296486.8	MANE_select
ENST00000512646.5	GENCODE experimental pipeline
ENST00000510706.5	GENCODE experimental pipeline
ENST00000505233.5	QC splicing correct
ENST00000512320.1	GENCODE experimental pipeline
ENST00000399132.6	MANE_select
ENST00000399126.1	NP_115907
ENST00000654972.1	Assembled from SLRseq reads (SRP049776)
ENST00000510971.6	Assembled from SLRseq reads (SRP049776)
ENST00000659270.1	Assembled from SLRseq reads (SRP049776)
ENST00000670376.1	Assembled from SLRseq reads (SRP049776)
ENST00000657290.1	Assembled from SLRseq reads (SRP049776)
ENST00000667746.1	Assembled from SLRseq reads (SRP049776)
ENST00000265175.5	MANE_select
ENST00000394650.7	MANE_select
ENST00000452915.3	QC splicing correct
ENST00000265164.7	MANE_select
ENST00000505486.1	GENCODE experimental pipeline
ENST00000243501.10	MANE_select
ENST00000394634.7	CAGE supported TSS
ENST00000394634.7	MANE_select
ENST00000394635.8	CAGE supported TSS
ENST00000394631.7	alternative 5' UTR
ENST00000226796.7	MANE_select
ENST00000317735.7	MANE_select
ENST00000594814.6	MANE_select
ENST00000594814.6	NP_940908.3
ENST00000265171.10	MANE_select
ENST00000509793.5	GENCODE experimental pipeline
ENST00000509793.5	NP_001171602
ENST00000652245.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000503392.1	GENCODE experimental pipeline
ENST00000503392.1	NP_001171601
ENST00000302274.8	MANE_select
ENST00000302274.8	alternative 5' UTR
ENST00000394607.7	alternative 5' UTR
ENST00000506625.5	alternative 5' UTR
ENST00000503885.1	alternative 5' UTR
ENST00000265162.10	MANE_select
ENST00000509344.1	Final 91 bp of EST evidence does not align to this, or any region of the human genome
ENST00000504100.1	GENCODE experimental pipeline
ENST00000513690.2	GENCODE experimental pipeline
ENST00000503456.1	CAGE supported TSS
ENST00000644743.1	CAGE supported TSS
ENST00000644743.1	LR annotation
ENST00000644743.1	MANE_select
ENST00000394595.8	CAGE supported TSS
ENST00000394595.8	LR annotation
ENST00000394595.8	alternative 5' UTR
ENST00000354925.6	alternative 5' UTR
ENST00000511837.5	alternative 5' UTR
ENST00000511990.1	alternative 5' UTR
ENST00000512794.1	GENCODE experimental pipeline
ENST00000668198.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000510034.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666030.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000309733.6	MANE_select
ENST00000274000.10	MANE_select
ENST00000361717.4	MANE_select
ENST00000500655.2	alternative 5' UTR
ENST00000650871.1	MANE_select
ENST00000650871.1	genebuild_only_MANE
ENST00000458497.6	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000652638.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000313341.4	MANE_select
ENST00000505019.6	MANE_select
ENST00000505019.6	NP_060862.3
ENST00000505019.6	confirm experimentally
ENST00000514770.5	QC splicing correct
ENST00000503172.5	alternative 5' UTR
ENST00000344442.10	MANE_select
ENST00000508577.5	alternative 5' UTR
ENST00000505034.5	alternative 5' UTR
ENST00000651579.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000507443.1	alternative 5' UTR
ENST00000505632.1	GENCODE experimental pipeline
ENST00000672934.1	QC splicing correct
ENST00000671951.1	CAGE supported TSS
ENST00000671951.1	alternative 5' UTR
ENST00000671704.1	CAGE supported TSS
ENST00000671704.1	alternative 5' UTR
ENST00000357077.9	MANE_select
ENST00000514246.1	GENCODE experimental pipeline
ENST00000672240.1	CAGE supported TSS
ENST00000512999.1	GENCODE experimental pipeline
ENST00000672411.1	CAGE supported TSS
ENST00000673231.1	CAGE supported TSS
ENST00000673353.1	CAGE supported TSS
ENST00000505342.6	CAGE supported TSS
ENST00000672915.1	CAGE supported TSS
ENST00000509550.5	CAGE supported TSS
ENST00000673538.1	CAGE supported TSS
ENST00000673048.1	CAGE supported TSS
ENST00000504415.5	GENCODE experimental pipeline
ENST00000504415.5	QC splicing correct
ENST00000511590.2	GENCODE experimental pipeline
ENST00000668381.1	Assembled from SLRseq reads (SRP049776)
ENST00000661685.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000513645.2	GENCODE experimental pipeline
ENST00000511664.6	MANE_select
ENST00000513132.5	alternative 3' UTR
ENST00000315366.8	MANE_select
ENST00000503557.1	GENCODE experimental pipeline
ENST00000507710.1	alternative 5' UTR
ENST00000310836.11	MANE_select
ENST00000394511.3	alternative 5' UTR
ENST00000264363.7	MANE_select
ENST00000604093.2	not best-in-genome evidence
ENST00000660994.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669446.1	Assembled from SLRseq reads (SRP049776)
ENST00000668097.1	Assembled from SLRseq reads (SRP049776)
ENST00000654940.1	Assembled from SLRseq reads (SRP049776)
ENST00000658952.1	Assembled from SLRseq reads (SRP049776)
ENST00000663126.1	Assembled from SLRseq reads (SRP049776)
ENST00000310754.5	MANE_select
ENST00000653017.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666459.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662581.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657433.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668339.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668339.1	QC splicing correct
ENST00000654670.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666918.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654527.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656442.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655906.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420701.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426240.5	QC splicing correct
ENST00000668361.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448804.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419264.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668756.1	Assembled from SLRseq reads (SRP049776)
ENST00000659910.1	Assembled from SLRseq reads (SRP049776)
ENST00000655627.1	Assembled from SLRseq reads (SRP049776)
ENST00000662639.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670630.1	Assembled from SLRseq reads (SRP049776)
ENST00000671671.1	Assembled from SLRseq reads (SRP049776)
ENST00000667220.1	Assembled from SLRseq reads (SRP049776)
ENST00000669946.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670348.1	Assembled from SLRseq reads (SRP049776)
ENST00000658771.1	Assembled from SLRseq reads (SRP049776)
ENST00000656637.1	Assembled from SLRseq reads (SRP049776)
ENST00000667115.1	Assembled from SLRseq reads (SRP049776)
ENST00000664454.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664454.1	Assembled from SLRseq reads (SRP049776)
ENST00000665403.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665403.1	Assembled from SLRseq reads (SRP049776)
ENST00000437514.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660654.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000665215.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662705.1	Assembled from SLRseq reads (SRP049776)
ENST00000665422.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667741.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671002.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000600624.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608048.1	nested 454 RNA-Seq supported
ENST00000668162.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650758.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000669974.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668180.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655867.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663617.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658473.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000296499.6	MANE_select
ENST00000654083.1	Assembled from SLRseq reads (SRP049776)
ENST00000667980.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652022.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000602819.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665363.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000602414.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000296498.3	MANE_select
ENST00000628457.2	Assembled from SLRseq reads (SRP049776)
ENST00000670296.1	Assembled from SLRseq reads (SRP049776)
ENST00000667475.1	Assembled from SLRseq reads (SRP049776)
ENST00000660675.1	Assembled from SLRseq reads (SRP049776)
ENST00000660577.1	Assembled from SLRseq reads (SRP049776)
ENST00000660319.1	Assembled from SLRseq reads (SRP049776)
ENST00000657708.1	Assembled from SLRseq reads (SRP049776)
ENST00000669615.1	Assembled from SLRseq reads (SRP049776)
ENST00000665753.1	Assembled from SLRseq reads (SRP049776)
ENST00000655315.1	Assembled from SLRseq reads (SRP049776)
ENST00000664083.1	Assembled from SLRseq reads (SRP049776)
ENST00000668247.1	Assembled from SLRseq reads (SRP049776)
ENST00000388822.10	MANE_select
ENST00000508801.1	GENCODE experimental pipeline
ENST00000280551.11	MANE_select
ENST00000511481.5	GENCODE experimental pipeline
ENST00000503683.1	alternative 5' UTR
ENST00000610556.4	CAGE supported TSS
ENST00000307142.9	MANE_select
ENST00000429713.7	NP_001122405.1
ENST00000434046.6	NP_001122406.1
ENST00000627783.2	CAGE supported TSS
ENST00000307128.6	MANE_select
ENST00000274030.10	NM_019050.2
ENST00000504110.2	MANE_select
ENST00000504110.2	NP_001001701.2
ENST00000274024.4	MANE_select
ENST00000634317.1	not best-in-genome evidence
ENST00000650915.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000652344.1	CAGE supported TSS
ENST00000354960.8	MANE_select
ENST00000652566.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000503266.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669300.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000296509.11	MANE_select
ENST00000511064.6	Assembled from SLRseq reads (SRP049776)
ENST00000653046.1	Assembled from SLRseq reads (SRP049776)
ENST00000506100.1	GENCODE experimental pipeline
ENST00000505556.1	GENCODE experimental pipeline
ENST00000264808.8	MANE_select
ENST00000379692.9	MANE_select
ENST00000515757.5	alternative 5' UTR
ENST00000511408.1	alternative 5' UTR
ENST00000507782.1	GENCODE experimental pipeline
ENST00000057513.8	MANE_select
ENST00000057513.8	NP_079149.3
ENST00000394427.3	MANE_select
ENST00000296511.10	MANE_select
ENST00000501272.6	Genoscope mRNA only
ENST00000506395.5	Genoscope mRNA only
ENST00000515017.5	Genoscope mRNA only
ENST00000643802.2	MANE_select
ENST00000394396.5	alternative 5' UTR
ENST00000394394.5	alternative 5' UTR
ENST00000514885.5	alternative 5' UTR
ENST00000243498.10	MANE_select
ENST00000509800.5	GENCODE experimental pipeline
ENST00000274026.10	MANE_select
ENST00000264499.9	MANE_select
ENST00000507814.5	alternative 3' UTR
ENST00000379645.8	MANE_select
ENST00000379645.8	NP_001124170.1
ENST00000502968.1	alternative 5' UTR
ENST00000679879.1	MANE_select
ENST00000679879.1	compmerge.2800.pooled.chr4
ENST00000449251.1	GENCODE experimental pipeline
ENST00000421930.6	QC splicing correct
ENST00000438707.5	QC splicing correct
ENST00000296513.7	MANE_select
ENST00000388725.2	GENCODE experimental pipeline
ENST00000226730.5	MANE_select
ENST00000648588.1	LR annotation
ENST00000648588.1	MANE_select
ENST00000668520.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660809.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667001.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660031.1	Assembled from RACEseq reads
ENST00000314218.8	MANE_select
ENST00000264498.8	NP_001997 (caution: the non-ATG start described by Prats et al was made into an ATG start in this NP entry)
ENST00000608478.1	CAGE supported TSS
ENST00000644866.2	CAGE supported TSS
ENST00000644866.2	LR annotation
ENST00000644866.2	MANE_select
ENST00000653767.1	Assembled from SLRseq reads (SRP049776)
ENST00000512116.5	QC splicing correct
ENST00000304430.10	Antisense to FGF2
ENST00000304430.10	MANE_select
ENST00000304430.10	isoform a
ENST00000339154.6	Antisense to FGF2
ENST00000339154.6	isoform b
ENST00000503370.5	QC splicing correct
ENST00000510735.1	QC splicing correct
ENST00000274008.5	MANE_select
ENST00000422835.2	GENCODE experimental pipeline
ENST00000654181.1	Assembled from SLRseq reads (SRP049776)
ENST00000505319.5	alternative 5' UTR
ENST00000651917.1	MANE_select
ENST00000651917.1	genebuild_only_MANE
ENST00000339241.1	alternative 5' UTR
ENST00000507703.1	alternative 5' UTR
ENST00000508849.1	alternative 5' UTR
ENST00000667633.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664210.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666328.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664622.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662928.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666490.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668501.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669502.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661368.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660330.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669505.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657410.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670311.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666756.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668255.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670449.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671094.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667528.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655892.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667041.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655571.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671655.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656388.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670628.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671119.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659080.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666015.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669933.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661665.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671260.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663714.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662262.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663679.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669259.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651887.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000659179.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657976.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000504087.6	MANE_select
ENST00000515641.1	GenBank: BAG58158.1
ENST00000394329.9	MANE_select
ENST00000667497.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000670367.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657991.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658298.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667815.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655624.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000505741.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651327.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000661809.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000513519.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000667124.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661442.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669239.1	Assembled from SLRseq reads (SRP049776)
ENST00000662020.1	Assembled from SLRseq reads (SRP049776)
ENST00000668757.1	Assembled from SLRseq reads (SRP049776)
ENST00000504491.1	GENCODE experimental pipeline
ENST00000335251.11	MANE_select
ENST00000510766.1	QC splicing correct
ENST00000281154.6	MANE_select
ENST00000508776.5	alternative 5' UTR
ENST00000296464.9	MANE_select
ENST00000270861.10	MANE_select
ENST00000515069.5	GENCODE experimental pipeline
ENST00000515069.5	QC splicing correct
ENST00000507249.5	QC splicing correct
ENST00000514379.5	GENCODE experimental pipeline
ENST00000296468.8	MGC33302
ENST00000641686.2	MANE_select
ENST00000641686.2	alternative 5' UTR
ENST00000641508.1	alternative 3' UTR
ENST00000641748.1	alternative 3' UTR
ENST00000641928.1	alternative 3' UTR
ENST00000641393.1	alternative 5' UTR
ENST00000641753.1	alternative 3' UTR
ENST00000641434.1	alternative 3' UTR
ENST00000641482.1	alternative 3' UTR
ENST00000641413.1	alternative 3' UTR
ENST00000641869.1	alternative 3' UTR
ENST00000515130.6	QC splicing correct
ENST00000641332.1	alternative 3' UTR
ENST00000641870.1	alternative 3' UTR
ENST00000641228.1	alternative 3' UTR
ENST00000641590.1	alternative 3' UTR
ENST00000642078.1	alternative 3' UTR
ENST00000642078.1	alternative 5' UTR
ENST00000641340.1	alternative 3' UTR
ENST00000642121.1	NMD likely if extended
ENST00000641134.1	alternative 3' UTR
ENST00000641447.1	alternative 5' UTR
ENST00000473040.6	Genoscope mRNA only
ENST00000473040.6	QC splicing correct
ENST00000444616.5	non canonical U12
ENST00000645843.2	MANE_select
ENST00000388795.9	non canonical U12
ENST00000512292.5	GENCODE experimental pipeline
ENST00000326639.11	MANE_select
ENST00000648358.1	HsBN_lib11:Read_180764-Barcode%3DBC351:length%3D2177
ENST00000650359.1	TB0000033-DNA_A01-LRAAD-01:Read_235731-Barcode%3DBC349:length%3D2784
ENST00000296425.10	CAGE supported TSS
ENST00000296425.10	MANE_select
ENST00000520121.6	NP_006311.2
ENST00000520121.6	upstream ATG
ENST00000512483.5	Genoscope mRNA only
ENST00000512483.5	QC splicing correct
ENST00000662621.1	Assembled from SLRseq reads (SRP049776)
ENST00000667326.1	Assembled from SLRseq reads (SRP049776)
ENST00000663973.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000509360.1	not organism-supported
ENST00000226319.11	MANE_select
ENST00000226319.11	genebuild_only_MANE
ENST00000504089.5	alternative 5' UTR
ENST00000503785.5	alternative 5' UTR
ENST00000514740.1	alternative 5' UTR
ENST00000510308.5	alternative 5' UTR
ENST00000507833.5	alternative 5' UTR
ENST00000508997.1	alternative 5' UTR
ENST00000503565.5	non canonical conserved
ENST00000651532.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000281142.10	MANE_select
ENST00000281146.9	LOC132321
ENST00000502887.5	alternative 5' UTR
ENST00000425929.6	MANE_select
ENST00000425929.6	genebuild_only_MANE
ENST00000508622.1	QC splicing correct
ENST00000508622.1	alternative 5' UTR
ENST00000659495.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000653915.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000669328.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665329.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654715.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663942.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000500092.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653323.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664709.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667892.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660846.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670512.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664364.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652794.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658130.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659073.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654252.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668510.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657591.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660303.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671223.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663986.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654449.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655596.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664657.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657114.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663075.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666766.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663608.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000660340.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661425.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669757.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653703.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657768.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657908.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663850.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655259.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000624393.1	confirm experimentally
ENST00000652848.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000663566.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000500169.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654488.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654697.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000505436.1	QC splicing correct
ENST00000657220.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655257.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667068.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653283.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664412.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000514222.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658913.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663369.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663882.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654278.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662181.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657961.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664137.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657219.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000510592.1	QC splicing correct
ENST00000652009.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000504357.1	GENCODE experimental pipeline
ENST00000667267.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667505.1	Assembled from SLRseq reads (SRP049776)
ENST00000656167.1	Assembled from SLRseq reads (SRP049776)
ENST00000671428.1	Assembled from SLRseq reads (SRP049776)
ENST00000505289.6	Assembled from SLRseq reads (SRP049776)
ENST00000670166.1	Assembled from SLRseq reads (SRP049776)
ENST00000664075.1	Assembled from SLRseq reads (SRP049776)
ENST00000662896.1	Assembled from SLRseq reads (SRP049776)
ENST00000670280.1	Assembled from SLRseq reads (SRP049776)
ENST00000664880.1	Assembled from SLRseq reads (SRP049776)
ENST00000660426.1	Assembled from SLRseq reads (SRP049776)
ENST00000659189.1	Assembled from SLRseq reads (SRP049776)
ENST00000665360.1	Assembled from SLRseq reads (SRP049776)
ENST00000264360.7	MANE_select
ENST00000618019.1	NP_065866.1
ENST00000669848.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658435.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000658033.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000668641.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661637.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670570.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663124.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668013.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654404.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665766.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663875.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664397.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667687.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656052.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671422.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665122.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669907.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000504728.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653580.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654413.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661612.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657106.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666292.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000506638.1	GENCODE experimental pipeline
ENST00000651116.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000421491.4	MANE_select
ENST00000421491.4	upstream ATG
ENST00000666281.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670860.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666371.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000503009.1	GENCODE experimental pipeline
ENST00000505952.1	QC splicing correct
ENST00000656956.1	Assembled from SLRseq reads (SRP049776)
ENST00000505736.5	QC splicing correct
ENST00000652184.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000656187.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000669794.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000344876.9	MANE_select
ENST00000344876.9	NP_061908.1
ENST00000412923.6	NAGNAG splice site
ENST00000507846.5	GENCODE experimental pipeline
ENST00000507846.5	alternative 5' UTR
ENST00000510305.5	GENCODE experimental pipeline
ENST00000671270.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659076.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000506420.1	GENCODE experimental pipeline
ENST00000655176.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666325.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656980.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661963.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667784.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662849.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656520.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668859.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665542.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658598.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658598.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000665179.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668210.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661479.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667051.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660519.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653774.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000514600.5	QC splicing correct
ENST00000654802.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666002.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666712.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670649.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668713.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660118.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000505874.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663598.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659677.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000503208.1	QC splicing correct
ENST00000660556.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661081.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654116.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666434.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658661.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655762.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670981.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659104.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663909.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666423.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660320.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665774.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671369.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664696.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000512536.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653614.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000280612.9	MANE_select
ENST00000509248.1	QC splicing correct
ENST00000671213.1	Assembled from SLRseq reads (SRP049776)
ENST00000658827.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664556.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669857.1	Assembled from SLRseq reads (SRP049776)
ENST00000669857.1	QC splicing correct
ENST00000667838.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000659710.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662372.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661748.1	Assembled from SLRseq reads (SRP049776)
ENST00000662941.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655654.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662404.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662404.1	Assembled from SLRseq reads (SRP049776)
ENST00000662169.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658842.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658842.1	Assembled from SLRseq reads (SRP049776)
ENST00000510736.1	QC splicing correct
ENST00000515282.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656561.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665940.1	Assembled from SLRseq reads (SRP049776)
ENST00000660826.1	Assembled from SLRseq reads (SRP049776)
ENST00000663528.1	Assembled from SLRseq reads (SRP049776)
ENST00000653577.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653577.1	Assembled from SLRseq reads (SRP049776)
ENST00000653944.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663030.1	Assembled from SLRseq reads (SRP049776)
ENST00000661669.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661669.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000671501.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652863.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666159.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663319.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670746.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658543.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662769.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659480.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000513400.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666509.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666313.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663892.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000280614.4	MANE_select
ENST00000398955.2	MANE_select
ENST00000394228.5	alternative 5' UTR
ENST00000394223.2	MANE_select
ENST00000394223.2	alternative 5' UTR
ENST00000505036.5	alternative 5' UTR
ENST00000296543.10	MANE_select
ENST00000608661.1	CAGE supported TSS
ENST00000608663.5	CAGE supported TSS
ENST00000609359.1	CAGE supported TSS
ENST00000610159.1	CAGE supported TSS
ENST00000610159.1	confirm experimentally
ENST00000652268.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000305626.6	MANE_select
ENST00000274031.8	MANE_select
ENST00000406354.1	GENCODE experimental pipeline
ENST00000608795.5	CAGE supported TSS
ENST00000608958.1	. No CAGE or alternative polyA inbetween. Large block of Alu and Line rpts in UTR could account for gap in ESTs and low bodymap coverage
ENST00000608958.1	CAGE supported TSS
ENST00000608402.1	not organism-supported
ENST00000653387.1	Assembled from SLRseq reads (SRP049776)
ENST00000265498.6	MANE_select
ENST00000503816.1	QC splicing correct
ENST00000509479.6	MANE_select
ENST00000661355.1	Assembled from SLRseq reads (SRP049776)
ENST00000338517.8	alternative 5' UTR
ENST00000394203.7	alternative 5' UTR
ENST00000506322.5	QC splicing correct
ENST00000506322.5	alternative 5' UTR
ENST00000506597.2	NP_001147024
ENST00000506597.2	upstream ATG
ENST00000608372.6	MANE_select
ENST00000510586.5	QC splicing correct
ENST00000502535.1	alternative 5' UTR
ENST00000512692.7	Assembled from SLRseq reads (SRP049776)
ENST00000658255.1	Assembled from SLRseq reads (SRP049776)
ENST00000664103.1	Assembled from SLRseq reads (SRP049776)
ENST00000325617.10	MANE_select
ENST00000509477.1	alternative 5' UTR
ENST00000511113.6	MANE_select
ENST00000513018.5	88679  88624
ENST00000515402.1	GENCODE experimental pipeline
ENST00000624981.1	confirm experimentally
ENST00000323570.8	MANE_select
ENST00000507667.1	alternative 5' UTR
ENST00000502397.5	alternative 5' UTR
ENST00000262999.4	MANE_select
ENST00000669079.1	Assembled from SLRseq reads (SRP049776)
ENST00000442267.3	MANE_select
ENST00000503844.1	GENCODE experimental pipeline
ENST00000515673.7	MANE_select
ENST00000506101.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000262990.9	MANE_select
ENST00000512809.5	alternative 5' UTR
ENST00000503649.5	alternative 5' UTR
ENST00000512738.5	alternative 5' UTR
ENST00000514347.1	GENCODE experimental pipeline
ENST00000653420.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670611.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658372.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659781.1	Assembled from SLRseq reads (SRP049776)
ENST00000511213.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652978.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000320650.9	MANE_select
ENST00000296545.11	alternative 5' UTR
ENST00000514653.5	NP_751915.1
ENST00000514653.5	PMID:8977197
ENST00000529613.5	alternative 5' UTR
ENST00000477265.5	PMID:8977197
ENST00000477265.5	alternative 5' UTR
ENST00000505483.1	non canonical TEC
ENST00000512489.1	CAGE supported TSS
ENST00000507826.1	GENCODE experimental pipeline
ENST00000657857.1	Assembled from SLRseq reads (SRP049776)
ENST00000507486.1	GENCODE experimental pipeline
ENST00000307017.9	MANE_select
ENST00000515366.5	alternative 5' UTR
ENST00000509992.1	GENCODE experimental pipeline
ENST00000666597.1	Assembled from SLRseq reads (SRP049776)
ENST00000283131.4	MANE_select
ENST00000664496.1	Assembled from SLRseq reads (SRP049776)
ENST00000659540.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669148.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000658551.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000641741.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000506982.1	QC splicing correct
ENST00000506982.1	non canonical TEC
ENST00000671307.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656620.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653310.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651102.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000329798.5	GENCODE experimental pipeline
ENST00000329798.5	MANE_select
ENST00000358615.9	MANE_select
ENST00000437468.2	alternative 3' UTR
ENST00000506679.5	QC splicing correct
ENST00000502664.6	MANE_select
ENST00000504951.6	non canonical other
ENST00000510196.6	non canonical other
ENST00000652283.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000641688.3	MANE_select
ENST00000512064.5	NP_001295116
ENST00000665214.1	Assembled from SLRseq reads (SRP049776)
ENST00000296575.8	MANE_select
ENST00000507656.6	MANE_select
ENST00000507656.6	alternative 5' UTR
ENST00000451299.6	alternative 5' UTR
ENST00000514390.5	alternative 5' UTR
ENST00000513054.5	alternative 5' UTR
ENST00000504721.5	alternative 5' UTR
ENST00000502847.1	alternative 5' UTR
ENST00000669995.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670304.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660332.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000502586.5	alternative 5' UTR
ENST00000296577.9	MANE_select
ENST00000454497.6	NP_001096123.1
ENST00000447906.8	MANE_select
ENST00000505976.5	QC splicing correct
ENST00000509620.6	NP_059963.1
ENST00000504501.1	alternative 5' UTR
ENST00000610239.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667468.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660722.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654926.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664112.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659559.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659879.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000624774.1	confirm experimentally
ENST00000658284.1	Assembled from SLRseq reads (SRP049776)
ENST00000302085.9	MANE_select
ENST00000302085.9	alternative 5' UTR
ENST00000502342.1	GENCODE experimental pipeline
ENST00000649704.1	alternative 5' UTR
ENST00000679563.1	alternative 5' UTR
ENST00000649156.2	CAGE supported TSS
ENST00000649156.2	LR annotation
ENST00000649156.2	MANE_select
ENST00000648388.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648388.1	alternative 5' UTR
ENST00000541599.5	alternative 5' UTR
ENST00000438731.7	CCDS47140.1
ENST00000438731.7	MANE_select
ENST00000508784.6	MANE_select
ENST00000503462.3	GENCODE experimental pipeline
ENST00000656985.1	alternative 3' UTR
ENST00000511659.2	GENCODE experimental pipeline
ENST00000511659.2	alternative 3' UTR
ENST00000652097.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000508995.1	NMD likely if extended
ENST00000652711.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000652178.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000296581.11	MANE_select
ENST00000649747.1	non canonical other
ENST00000502781.5	alternative 5' UTR
ENST00000636502.1	upstream ATG
ENST00000335472.12	MANE_select
ENST00000507560.5	QC splicing correct
ENST00000281321.3	MANE_select
ENST00000325106.9	MANE_select
ENST00000325106.9	NAGNAG splice site
ENST00000502319.1	non canonical conserved
ENST00000623012.1	confirm experimentally
ENST00000669874.1	Assembled from SLRseq reads (SRP049776)
ENST00000667105.1	Assembled from SLRseq reads (SRP049776)
ENST00000671296.1	Assembled from SLRseq reads (SRP049776)
ENST00000651419.1	MANE_select
ENST00000651419.1	genebuild_only_MANE
ENST00000503721.1	QC splicing correct
ENST00000652998.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653754.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656017.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000296582.8	MANE_select
ENST00000505999.5	QC splicing correct
ENST00000322396.7	MANE_select
ENST00000336498.8	MANE_select
ENST00000510076.1	GENCODE experimental pipeline
ENST00000358102.8	MANE_select
ENST00000358102.8	alternative 5' UTR
ENST00000512865.5	alternative 5' UTR
ENST00000511528.1	not organism-supported
ENST00000503313.1	GENCODE experimental pipeline
ENST00000514843.1	GENCODE experimental pipeline
ENST00000669991.1	Assembled from SLRseq reads (SRP049776)
ENST00000661928.1	Assembled from SLRseq reads (SRP049776)
ENST00000504874.1	GENCODE experimental pipeline
ENST00000623546.1	TEC
ENST00000657933.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668418.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000504755.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656499.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000636793.2	MANE_select
ENST00000510975.1	NMD likely if extended
ENST00000665742.1	Assembled from SLRseq reads (SRP049776)
ENST00000654977.1	Assembled from SLRseq reads (SRP049776)
ENST00000296550.12	MANE_select
ENST00000651943.2	LR annotation
ENST00000651943.2	MANE_select
ENST00000510413.5	GENCODE experimental pipeline
ENST00000508606.1	GENCODE experimental pipeline
ENST00000502839.1	GENCODE experimental pipeline
ENST00000317605.6	MANE_select
ENST00000509736.5	GENCODE experimental pipeline
ENST00000274065.9	MANE_select
ENST00000507327.5	QC splicing correct
ENST00000604030.7	MANE_select
ENST00000514152.5	QC splicing correct
ENST00000514152.5	alternative 5' UTR
ENST00000652233.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000508847.1	GENCODE experimental pipeline
ENST00000435205.6	MANE_select
ENST00000435205.6	genebuild_only_MANE
ENST00000263985.11	MANE_select
ENST00000515812.5	GENCODE experimental pipeline
ENST00000653501.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659253.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670924.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670924.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000663327.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653329.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657686.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000513617.1	GENCODE experimental pipeline
ENST00000660869.1	Assembled from SLRseq reads (SRP049776)
ENST00000515805.1	GENCODE experimental pipeline
ENST00000667963.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000510416.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000510416.2	GENCODE experimental pipeline
ENST00000652265.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000664690.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669340.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651553.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000509332.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666780.1	Assembled from SLRseq reads (SRP049776)
ENST00000653378.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000504957.1	GENCODE experimental pipeline
ENST00000504785.1	GENCODE experimental pipeline
ENST00000393956.9	CAGE supported TSS
ENST00000393956.9	LR annotation
ENST00000296555.11	CAGE supported TSS
ENST00000296555.11	LR annotation
ENST00000281708.10	CAGE supported TSS
ENST00000281708.10	LR annotation
ENST00000281708.10	MANE_select
ENST00000281708.10	alternative 5' UTR
ENST00000603841.1	alternative 5' UTR
ENST00000605042.1	alternative 5' UTR
ENST00000647166.1	alternative 5' UTR
ENST00000643834.1	alternative 5' UTR
ENST00000642901.1	alternative 5' UTR
ENST00000662406.1	Assembled from SLRseq reads (SRP049776)
ENST00000671401.1	Assembled from SLRseq reads (SRP049776)
ENST00000304385.8	MANE_select
ENST00000304337.3	MANE_select
ENST00000353617.7	MANE_select
ENST00000353617.7	genebuild_only_MANE
ENST00000653733.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000511601.6	MANE_select
ENST00000662511.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000676423.1	PASA_cluster_17064
ENST00000676423.1	align_id:3703273|asmbl_193438
ENST00000676423.1	slrseq_merged_multi_lifted
ENST00000675745.1	PASA_cluster_17064
ENST00000675745.1	align_id:3703279|asmbl_193444
ENST00000675745.1	slrseq_merged_multi_lifted
ENST00000676348.1	PASA_cluster_17064
ENST00000676348.1	align_id:3703278|asmbl_193443
ENST00000676348.1	slrseq_merged_multi_lifted
ENST00000676408.1	PASA_cluster_17064
ENST00000676408.1	align_id:3703322|asmbl_193487
ENST00000676408.1	slrseq_merged_multi_lifted
ENST00000491446.2	GENCODE experimental pipeline
ENST00000674874.1	NAGNAG splice site
ENST00000674874.1	PASA_cluster_17064
ENST00000674874.1	align_id:3703268|asmbl_193433
ENST00000674874.1	slrseq_merged_multi_lifted
ENST00000675315.1	PASA_cluster_17064
ENST00000675315.1	align_id:3703267|asmbl_193432
ENST00000675315.1	alternative 5' UTR
ENST00000675315.1	slrseq_merged_multi_lifted
ENST00000676458.1	NAGNAG splice site
ENST00000676458.1	PASA_cluster_17064
ENST00000676458.1	align_id:3703271|asmbl_193436
ENST00000676458.1	slrseq_merged_multi_lifted
ENST00000675782.1	PASA_cluster_17064
ENST00000675782.1	align_id:3703284|asmbl_193449
ENST00000675782.1	slrseq_merged_multi_lifted
ENST00000632856.2	PASA_cluster_17064
ENST00000632856.2	align_id:3703356|asmbl_193521
ENST00000632856.2	slrseq_merged_multi_lifted
ENST00000632856.2	upstream ATG
ENST00000441616.6	PASA_cluster_17064
ENST00000441616.6	align_id:3703357|asmbl_193522
ENST00000441616.6	slrseq_merged_multi_lifted
ENST00000441616.6	upstream ATG
ENST00000433687.2	PASA_cluster_17064
ENST00000433687.2	align_id:3703346|asmbl_193511
ENST00000433687.2	slrseq_merged_multi_lifted
ENST00000433687.2	upstream ATG
ENST00000675623.1	PASA_cluster_17064
ENST00000675623.1	align_id:3703358|asmbl_193523
ENST00000675623.1	slrseq_merged_multi_lifted
ENST00000675623.1	upstream ATG
ENST00000674787.1	PASA_cluster_17064
ENST00000674787.1	align_id:3703355|asmbl_193520
ENST00000674787.1	slrseq_merged_multi_lifted
ENST00000494872.6	align_id:3703342|asmbl_193507
ENST00000494872.6	slrseq_merged_multi_lifted
ENST00000494872.6	upstream ATG
ENST00000460908.2	NAGNAG splice site
ENST00000460908.2	PASA_cluster_17064
ENST00000460908.2	align_id:3703345|asmbl_193510
ENST00000460908.2	slrseq_merged_multi_lifted
ENST00000460908.2	upstream ATG
ENST00000675862.1	PASA_cluster_17064
ENST00000675862.1	align_id:3703348|asmbl_193513
ENST00000675862.1	slrseq_merged_multi_lifted
ENST00000676169.1	PASA_cluster_17064
ENST00000676169.1	align_id:3703341|asmbl_193506
ENST00000676169.1	slrseq_merged_multi_lifted
ENST00000675239.1	PASA_cluster_17064
ENST00000675239.1	align_id:3703325|asmbl_193490
ENST00000675239.1	slrseq_merged_multi_lifted
ENST00000675239.1	upstream ATG
ENST00000674718.1	PASA_cluster_17064
ENST00000674718.1	align_id:3703326|asmbl_193491
ENST00000674718.1	slrseq_merged_multi_lifted
ENST00000675411.1	PASA_cluster_17064
ENST00000675411.1	align_id:3703292|asmbl_193457
ENST00000675411.1	slrseq_merged_multi_lifted
ENST00000675411.1	upstream ATG
ENST00000676305.1	PASA_cluster_17064
ENST00000676305.1	align_id:3703299|asmbl_193464
ENST00000676305.1	slrseq_merged_multi_lifted
ENST00000676029.1	PASA_cluster_17064
ENST00000676029.1	align_id:3703288|asmbl_193453
ENST00000676029.1	slrseq_merged_multi_lifted
ENST00000676029.1	upstream ATG
ENST00000675627.1	PASA_cluster_17064
ENST00000675627.1	align_id:3703287|asmbl_193452
ENST00000675627.1	slrseq_merged_multi_lifted
ENST00000675627.1	upstream ATG
ENST00000675780.1	PASA_cluster_17064
ENST00000675780.1	align_id:3703301|asmbl_193466
ENST00000675780.1	slrseq_merged_multi_lifted
ENST00000675780.1	upstream ATG
ENST00000674976.1	upstream uORF
ENST00000338700.10	MANE_select
ENST00000338700.10	NP_056086.2
ENST00000675293.1	NAGNAG splice site
ENST00000675293.1	PASA_cluster_17064
ENST00000675293.1	align_id:3703264|asmbl_193429
ENST00000675293.1	slrseq_merged_multi_lifted
ENST00000675293.1	upstream ATG
ENST00000675136.1	PASA_cluster_17064
ENST00000675136.1	align_id:3703293|asmbl_193458
ENST00000675136.1	slrseq_merged_multi_lifted
ENST00000675136.1	upstream ATG
ENST00000675673.1	PASA_cluster_17064
ENST00000675673.1	align_id:3703294|asmbl_193459
ENST00000675673.1	slrseq_merged_multi_lifted
ENST00000675673.1	upstream ATG
ENST00000675492.1	PASA_cluster_17064
ENST00000675492.1	align_id:3703306|asmbl_193471
ENST00000675492.1	slrseq_merged_multi_lifted
ENST00000675492.1	upstream ATG
ENST00000675744.1	PASA_cluster_17064
ENST00000675744.1	align_id:3703353|asmbl_193518
ENST00000675744.1	slrseq_merged_multi_lifted
ENST00000675744.1	upstream uORF
ENST00000675425.1	PASA_cluster_17064
ENST00000675425.1	align_id:3703303|asmbl_193468
ENST00000675425.1	slrseq_merged_multi_lifted
ENST00000675425.1	upstream ATG
ENST00000675384.1	GENCODE experimental pipeline
ENST00000675384.1	PASA_cluster_17064
ENST00000675384.1	align_id:3703263|asmbl_193428
ENST00000675384.1	align_id:3703351|asmbl_193516
ENST00000675384.1	slrseq_merged_multi_lifted
ENST00000675384.1	upstream uORF
ENST00000675063.1	PASA_cluster_17064
ENST00000675063.1	align_id:3703296|asmbl_193461
ENST00000675063.1	slrseq_merged_multi_lifted
ENST00000675063.1	upstream ATG
ENST00000675340.1	PASA_cluster_17064
ENST00000675340.1	align_id:3703304|asmbl_193469
ENST00000675340.1	slrseq_merged_multi_lifted
ENST00000675340.1	upstream ATG
ENST00000675835.1	PASA_cluster_17064
ENST00000675835.1	align_id:3703276|asmbl_193441
ENST00000675835.1	slrseq_merged_multi_lifted
ENST00000675835.1	upstream uORF
ENST00000675054.1	PASA_cluster_17064
ENST00000675054.1	align_id:3703274|asmbl_193439
ENST00000675054.1	slrseq_merged_multi_lifted
ENST00000676158.1	upstream ATG
ENST00000676224.1	PASA_cluster_17064
ENST00000676224.1	align_id:3703313|asmbl_193478
ENST00000676224.1	slrseq_merged_multi_lifted
ENST00000676224.1	upstream ATG
ENST00000674786.1	PASA_cluster_17064
ENST00000674786.1	align_id:3703295|asmbl_193460
ENST00000674786.1	slrseq_merged_multi_lifted
ENST00000674786.1	upstream ATG
ENST00000675710.1	PASA_cluster_17064
ENST00000675710.1	align_id:3703281|asmbl_193446
ENST00000675710.1	slrseq_merged_multi_lifted
ENST00000502281.3	PASA_cluster_17064
ENST00000502281.3	align_id:3703359|asmbl_193524
ENST00000502281.3	slrseq_merged_multi_lifted
ENST00000675363.1	PASA_cluster_17064
ENST00000675363.1	align_id:3703333|asmbl_193498
ENST00000675363.1	slrseq_merged_multi_lifted
ENST00000674876.1	CHESS_transcripts
ENST00000674876.1	CHS.41606.26
ENST00000675159.1	CHESS_transcripts
ENST00000675159.1	CHS.41606.27
ENST00000675871.1	PASA_cluster_17064
ENST00000675871.1	align_id:3703340|asmbl_193505
ENST00000675871.1	slrseq_merged_multi_lifted
ENST00000675049.1	PASA_cluster_17064
ENST00000675049.1	align_id:3703350|asmbl_193515
ENST00000675049.1	slrseq_merged_multi_lifted
ENST00000675899.1	NAGNAG splice site
ENST00000675611.1	PASA_cluster_17064
ENST00000675611.1	align_id:3703316|asmbl_193481
ENST00000675611.1	slrseq_merged_multi_lifted
ENST00000675343.1	PASA_cluster_17064
ENST00000675343.1	align_id:3703310|asmbl_193475
ENST00000675343.1	slrseq_merged_multi_lifted
ENST00000676220.1	PASA_cluster_17064
ENST00000676220.1	align_id:3703291|asmbl_193456
ENST00000676220.1	slrseq_merged_multi_lifted
ENST00000676033.1	PASA_cluster_17064
ENST00000676033.1	align_id:3703285|asmbl_193450
ENST00000676033.1	slrseq_merged_multi_lifted
ENST00000674872.1	PASA_cluster_17064
ENST00000674872.1	align_id:3703298|asmbl_193463
ENST00000674872.1	slrseq_merged_multi_lifted
ENST00000676167.1	PASA_cluster_17064
ENST00000676167.1	align_id:3703320|asmbl_193485
ENST00000676167.1	slrseq_merged_multi_lifted
ENST00000676335.1	PASA_cluster_17064
ENST00000676335.1	align_id:3703283|asmbl_193448
ENST00000676335.1	slrseq_merged_multi_lifted
ENST00000675146.1	PASA_cluster_17064
ENST00000675146.1	align_id:3703307|asmbl_193472
ENST00000675146.1	slrseq_merged_multi_lifted
ENST00000676374.1	PASA_cluster_17064
ENST00000676374.1	align_id:3703270|asmbl_193435
ENST00000676374.1	slrseq_merged_multi_lifted
ENST00000675170.1	PASA_cluster_17064
ENST00000675170.1	align_id:3703338|asmbl_193503
ENST00000675170.1	slrseq_merged_multi_lifted
ENST00000676057.1	PASA_cluster_17064
ENST00000676057.1	align_id:3703352|asmbl_193517
ENST00000676057.1	slrseq_merged_multi_lifted
ENST00000675804.1	PASA_cluster_17064
ENST00000675804.1	align_id:3703331|asmbl_193496
ENST00000675804.1	slrseq_merged_multi_lifted
ENST00000676202.1	PASA_cluster_17064
ENST00000676202.1	align_id:3703329|asmbl_193494
ENST00000676202.1	slrseq_merged_multi_lifted
ENST00000675567.1	PASA_cluster_17064
ENST00000675567.1	align_id:3703323|asmbl_193488
ENST00000675567.1	slrseq_merged_multi_lifted
ENST00000675210.1	PASA_cluster_17064
ENST00000675210.1	align_id:3703332|asmbl_193497
ENST00000675210.1	slrseq_merged_multi_lifted
ENST00000676196.1	PASA_cluster_17064
ENST00000676196.1	align_id:3703335|asmbl_193500
ENST00000676196.1	slrseq_merged_multi_lifted
ENST00000674935.1	PASA_cluster_17064
ENST00000674935.1	align_id:3703315|asmbl_193480
ENST00000674935.1	slrseq_merged_multi_lifted
ENST00000676291.1	PASA_cluster_17064
ENST00000676291.1	align_id:3703311|asmbl_193476
ENST00000676291.1	slrseq_merged_multi_lifted
ENST00000674769.1	PASA_cluster_17064
ENST00000674769.1	align_id:3703300|asmbl_193465
ENST00000674769.1	slrseq_merged_multi_lifted
ENST00000674896.1	PASA_cluster_17064
ENST00000674896.1	align_id:3703265|asmbl_193430
ENST00000674896.1	slrseq_merged_multi_lifted
ENST00000676191.1	PASA_cluster_17064
ENST00000676191.1	align_id:3703318|asmbl_193483
ENST00000676191.1	slrseq_merged_multi_lifted
ENST00000675412.1	PASA_cluster_17064
ENST00000675412.1	align_id:3703286|asmbl_193451
ENST00000675412.1	slrseq_merged_multi_lifted
ENST00000675312.1	PASA_cluster_17064
ENST00000675312.1	align_id:3703297|asmbl_193462
ENST00000675312.1	slrseq_merged_multi_lifted
ENST00000675456.1	PASA_cluster_17064
ENST00000675456.1	align_id:3703319|asmbl_193484
ENST00000675456.1	slrseq_merged_multi_lifted
ENST00000674847.1	PASA_cluster_17064
ENST00000674847.1	align_id:3703334|asmbl_193499
ENST00000674847.1	slrseq_merged_multi_lifted
ENST00000676015.1	CAGE supported TSS
ENST00000676015.1	GENCODE experimental pipeline
ENST00000676015.1	align_id:3703282|asmbl_193447
ENST00000676015.1	slrseq_merged_multi_lifted
ENST00000675977.1	PASA_cluster_17064
ENST00000675977.1	align_id:3703261|asmbl_193426
ENST00000675977.1	slrseq_merged_multi_lifted
ENST00000674832.1	PASA_cluster_17064
ENST00000674832.1	align_id:3703308|asmbl_193473
ENST00000674832.1	slrseq_merged_multi_lifted
ENST00000675783.1	PASA_cluster_17064
ENST00000675783.1	align_id:3703312|asmbl_193477
ENST00000675783.1	slrseq_merged_multi_lifted
ENST00000676264.1	PASA_cluster_17064
ENST00000676264.1	TB0000034-DNA_A01-LRAAD-01:Read_153550-Barcode%3DBC221:length%3D3622
ENST00000676264.1	align_id:3703277|asmbl_193442
ENST00000676264.1	slrseq_merged_multi_lifted
ENST00000675462.1	PASA_cluster_17064
ENST00000675462.1	align_id:3703328|asmbl_193493
ENST00000675462.1	slrseq_merged_multi_lifted
ENST00000674726.1	PASA_cluster_17064
ENST00000674726.1	align_id:3703321|asmbl_193486
ENST00000674726.1	slrseq_merged_multi_lifted
ENST00000676252.1	GENCODE experimental pipeline
ENST00000676252.1	align_id:3703270|asmbl_193435
ENST00000676252.1	align_id:3703275|asmbl_193440
ENST00000676252.1	slrseq_merged_multi_lifted
ENST00000675348.1	PASA_cluster_17064
ENST00000675348.1	align_id:3703289|asmbl_193454
ENST00000675348.1	slrseq_merged_multi_lifted
ENST00000674730.1	PASA_cluster_17064
ENST00000674730.1	align_id:3703305|asmbl_193470
ENST00000674730.1	slrseq_merged_multi_lifted
ENST00000675019.1	PASA_cluster_17064
ENST00000675019.1	align_id:3703327|asmbl_193492
ENST00000675019.1	slrseq_merged_multi_lifted
ENST00000675738.1	PASA_cluster_17064
ENST00000675738.1	align_id:3703302|asmbl_193467
ENST00000675738.1	slrseq_merged_multi_lifted
ENST00000675518.1	PASA_cluster_17064
ENST00000675518.1	align_id:3703354|asmbl_193519
ENST00000675518.1	slrseq_merged_multi_lifted
ENST00000674680.1	HsBN_lib7:Read_173950-Barcode%3DBC366:length%3D4565
ENST00000674680.1	PASA_cluster_17064
ENST00000674680.1	SLR-seq_HsBN_lib7
ENST00000674680.1	align_id:3703339|asmbl_193504
ENST00000674680.1	slrseq_merged_multi_lifted
ENST00000675838.1	PASA_cluster_17064
ENST00000675838.1	align_id:3703337|asmbl_193502
ENST00000675838.1	slrseq_merged_multi_lifted
ENST00000674967.1	PASA_cluster_17064
ENST00000674967.1	align_id:3703343|asmbl_193508
ENST00000674967.1	slrseq_merged_multi_lifted
ENST00000675079.1	PASA_cluster_17064
ENST00000675079.1	align_id:3703344|asmbl_193509
ENST00000675079.1	slrseq_merged_multi_lifted
ENST00000240488.8	MANE_select
ENST00000508731.5	GENCODE experimental pipeline
ENST00000508731.5	alternative 5' UTR
ENST00000504860.2	GENCODE experimental pipeline
ENST00000504860.2	alternative 5' UTR
ENST00000409959.8	MANE_select
ENST00000409959.8	NP_056011.3
ENST00000659875.1	Assembled from SLRseq reads (SRP049776)
ENST00000646900.1	alternative 5' UTR
ENST00000646219.1	alternative 5' UTR
ENST00000643501.1	alternative 5' UTR
ENST00000642700.2	CAGE supported TSS
ENST00000642700.2	LR annotation
ENST00000642700.2	MANE_select
ENST00000642700.2	alternative 5' UTR
ENST00000260010.6	alternative 5' UTR
ENST00000347063.9	MANE_select
ENST00000347063.9	non canonical TEC
ENST00000506505.1	QC splicing correct
ENST00000274063.5	MANE_select
ENST00000660197.1	Assembled from SLRseq reads (SRP049776)
ENST00000357232.10	MANE_select
ENST00000499023.7	MANE_select
ENST00000302068.9	MANE_select
ENST00000509493.1	GENCODE experimental pipeline
ENST00000509493.1	Genoscope mRNA only
ENST00000502545.5	Genoscope mRNA only
ENST00000651975.1	LR annotation
ENST00000403106.8	CAGE supported TSS
ENST00000403106.8	LR annotation
ENST00000403106.8	MANE_select
ENST00000336098.8	MANE_select
ENST00000405164.5	Genoscope mRNA only
ENST00000405164.5	QC splicing correct
ENST00000407946.5	Genoscope mRNA only
ENST00000407946.5	QC splicing correct
ENST00000502525.5	alternative 5' UTR
ENST00000336356.4	MANE_select
ENST00000336356.4	alternative 5' UTR
ENST00000281722.8	MANE_select
ENST00000510397.5	GENCODE experimental pipeline
ENST00000512640.1	alternative 5' UTR
ENST00000652141.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000511017.6	Assembled from SLRseq reads (SRP049776)
ENST00000329476.4	MANE_select
ENST00000311277.9	MANE_select
ENST00000650955.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000503466.1	QC splicing correct
ENST00000662537.1	Assembled from SLRseq reads (SRP049776)
ENST00000656376.1	Assembled from SLRseq reads (SRP049776)
ENST00000669827.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669827.1	Assembled from SLRseq reads (SRP049776)
ENST00000669860.1	Assembled from SLRseq reads (SRP049776)
ENST00000508265.1	GENCODE experimental pipeline
ENST00000511108.5	alternative 5' UTR
ENST00000506455.6	MANE_select
ENST00000506455.6	alternative 5' UTR
ENST00000455639.6	alternative 5' UTR
ENST00000296518.11	alternative 5' UTR
ENST00000505154.5	alternative 5' UTR
ENST00000652626.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000502959.5	GENCODE experimental pipeline
ENST00000264424.13	MANE_select
ENST00000505764.5	GENCODE experimental pipeline
ENST00000507146.5	GENCODE experimental pipeline
ENST00000503520.5	GENCODE experimental pipeline
ENST00000537611.3	MANE_select
ENST00000536354.3	MANE_select
ENST00000433477.4	MANE_select
ENST00000502773.6	MANE_select
ENST00000504672.5	QC splicing correct
ENST00000422544.2	QC splicing correct
ENST00000264428.9	MANE_select
ENST00000509282.1	alternative 5' UTR
ENST00000512774.5	alternative 5' UTR
ENST00000507898.5	alternative 5' UTR
ENST00000509417.5	alternative 5' UTR
ENST00000264426.14	MANE_select
ENST00000506284.5	alternative 5' UTR
ENST00000323661.10	alternative 5' UTR
ENST00000505888.1	alternative 5' UTR
ENST00000652341.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000652341.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000658855.1	Assembled from SLRseq reads (SRP049776)
ENST00000660468.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000585682.6	MANE_select
ENST00000296530.12	alternative 5' UTR
ENST00000393807.9	corf
ENST00000590648.5	alternative 5' UTR
ENST00000589306.1	GENCODE experimental pipeline
ENST00000587787.1	alternative 5' UTR
ENST00000503611.5	QC splicing correct
ENST00000503611.5	non canonical polymorphism
ENST00000509463.5	QC splicing correct
ENST00000509463.5	non canonical polymorphism
ENST00000505532.5	QC splicing correct
ENST00000505532.5	non canonical polymorphism
ENST00000514381.1	GENCODE experimental pipeline
ENST00000654308.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000505049.5	alternative 5' UTR
ENST00000505189.5	alternative 5' UTR
ENST00000511038.5	alternative 5' UTR
ENST00000508243.5	alternative 5' UTR
ENST00000512481.5	alternative 5' UTR
ENST00000504569.5	alternative 5' UTR
ENST00000514558.5	alternative 5' UTR
ENST00000503200.5	alternative 5' UTR
ENST00000296529.11	MANE_select
ENST00000502698.5	alternative 5' UTR
ENST00000514971.1	alternative 5' UTR
ENST00000666585.1	Assembled from RACEseq reads
ENST00000472969.1	GENCODE experimental pipeline
ENST00000307765.10	MANE_select
ENST00000307765.10	NP_067647
ENST00000484785.1	GENCODE experimental pipeline
ENST00000379205.5	MANE_select
ENST00000508457.1	QC splicing correct
ENST00000511912.6	MANE_select
ENST00000307738.5	GENCODE experimental pipeline
ENST00000307720.4	MANE_select
ENST00000264433.11	MANE_select
ENST00000434826.3	MANE_select
ENST00000644902.1	CAGE supported TSS
ENST00000514565.1	GENCODE experimental pipeline
ENST00000502485.1	GENCODE experimental pipeline
ENST00000510253.5	GENCODE experimental pipeline
ENST00000505026.1	GENCODE experimental pipeline
ENST00000502846.1	GENCODE experimental pipeline
ENST00000502846.1	QC splicing correct
ENST00000513718.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000306100.10	MANE_select
ENST00000655347.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661387.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661972.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665564.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662873.1	Assembled from SLRseq reads (SRP049776)
ENST00000503478.1	GENCODE experimental pipeline
ENST00000274054.3	MANE_select
ENST00000296533.3	MANE_select
ENST00000504790.1	alternative 5' UTR
ENST00000515701.1	alternative 5' UTR
ENST00000511901.1	alternative 5' UTR
ENST00000338566.8	MANE_select
ENST00000506953.1	alternative 5' UTR
ENST00000280605.5	MANE_select
ENST00000509657.5	GENCODE experimental pipeline
ENST00000358572.10	MANE_select
ENST00000507270.5	alternative 5' UTR
ENST00000515485.5	QC splicing correct
ENST00000507311.1	MANE_select
ENST00000507152.6	MANE_select
ENST00000515275.1	alternative 3' UTR
ENST00000329314.6	MANE_select
ENST00000512596.6	MANE_select
ENST00000507119.1	QC splicing correct
ENST00000507119.1	alternative 5' UTR
ENST00000508504.1	alternative 5' UTR
ENST00000306480.11	MANE_select
ENST00000226725.11	MANE_select
ENST00000506761.1	QC splicing correct
ENST00000507013.5	alternative 5' UTR
ENST00000261507.11	MANE_select
ENST00000393766.6	NP_001017369.1
ENST00000505270.1	alternative 5' UTR
ENST00000402744.9	MANE_select
ENST00000668379.1	Assembled from SLRseq reads (SRP049776)
ENST00000657783.1	Assembled from SLRseq reads (SRP049776)
ENST00000061240.7	MANE_select
ENST00000357545.9	MANE_select
ENST00000357154.7	QC splicing correct
ENST00000511531.5	QC splicing correct
ENST00000506886.5	QC splicing correct
ENST00000535728.5	QC splicing correct
ENST00000507086.5	QC splicing correct
ENST00000506697.5	QC splicing correct
ENST00000506926.1	QC splicing correct
ENST00000359299.8	MANE_select
ENST00000654434.1	Assembled from SLRseq reads (SRP049776)
ENST00000679510.1	grit_rampage
ENST00000393743.8	MANE_select
ENST00000680771.1	CHS.41760.4
ENST00000680917.1	long_read_pipeline_2
ENST00000679744.1	CHS.41760.11
ENST00000680998.1	align_id:3704333|asmbl_194498
ENST00000681832.1	align_id:3704333|asmbl_194498
ENST00000505863.1	GENCODE experimental pipeline
ENST00000505696.5	alternative 5' UTR
ENST00000514748.5	alternative 5' UTR
ENST00000512371.1	alternative 5' UTR
ENST00000505667.6	MANE_select
ENST00000511948.1	alternative 5' UTR
ENST00000513245.5	GENCODE experimental pipeline
ENST00000503457.1	GENCODE experimental pipeline
ENST00000306193.8	MANE_select
ENST00000284637.14	MANE_select
ENST00000502315.1	alternative 5' UTR
ENST00000510806.1	alternative 5' UTR
ENST00000507142.6	MANE_select
ENST00000507142.6	alternative 5' UTR
ENST00000511633.5	alternative 5' UTR
ENST00000510108.1	QC splicing correct
ENST00000657874.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000511092.5	alternative 5' UTR
ENST00000512813.5	alternative 5' UTR
ENST00000513761.6	MANE_select
ENST00000393381.3	MANE_select
ENST00000653930.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657288.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000508313.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669558.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665818.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657085.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669514.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000509956.1	GENCODE experimental pipeline
ENST00000660605.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000508955.2	Assembled from SLRseq reads (SRP049776)
ENST00000508955.2	GENCODE experimental pipeline
ENST00000361618.4	MANE_select
ENST00000512698.1	alternative 5' UTR
ENST00000502832.1	alternative 5' UTR
ENST00000507601.1	GENCODE experimental pipeline
ENST00000393702.7	GENCODE experimental pipeline
ENST00000504999.1	alternative 5' UTR
ENST00000506764.1	alternative 5' UTR
ENST00000510306.1	alternative 5' UTR
ENST00000337664.9	MANE_select
ENST00000337664.9	alternative 5' UTR
ENST00000353187.6	alternative 5' UTR
ENST00000510340.5	GENCODE experimental pipeline
ENST00000507375.5	alternative 5' UTR
ENST00000502392.1	alternative 5' UTR
ENST00000667527.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665566.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654867.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654867.1	GENCODE experimental pipeline
ENST00000657650.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660060.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000504509.2	Assembled from SLRseq reads (SRP049776)
ENST00000509548.2	QC splicing correct
ENST00000654869.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663587.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666580.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654933.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000505329.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661044.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661066.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668913.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671192.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000651666.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000399152.2	QC splicing correct
ENST00000506823.6	MANE_select
ENST00000656803.1	Assembled from SLRseq reads (SRP049776)
ENST00000663396.1	Assembled from SLRseq reads (SRP049776)
ENST00000661589.1	Assembled from SLRseq reads (SRP049776)
ENST00000499322.7	Assembled from SLRseq reads (SRP049776)
ENST00000659700.1	Assembled from SLRseq reads (SRP049776)
ENST00000666327.1	Assembled from SLRseq reads (SRP049776)
ENST00000510523.2	Assembled from SLRseq reads (SRP049776)
ENST00000660750.1	Assembled from SLRseq reads (SRP049776)
ENST00000265000.9	MANE_select
ENST00000296503.10	MANE_select
ENST00000438704.6	alternative 5' UTR
ENST00000446922.6	alternative 5' UTR
ENST00000506267.1	alternative 5' UTR
ENST00000651702.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651702.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000658397.1	Assembled from SLRseq reads (SRP049776)
ENST00000666010.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000609153.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000609900.1	CAGE supported TSS
ENST00000504618.1	GENCODE experimental pipeline
ENST00000296504.4	MANE_select
ENST00000296506.8	MANE_select
ENST00000664814.1	Assembled from RACEseq reads
ENST00000652376.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000652035.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000359562.4	MANE_select
ENST00000505300.1	Genoscope mRNA only
ENST00000505300.1	QC splicing correct
ENST00000645869.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000504429.1	GENCODE experimental pipeline
ENST00000660497.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665435.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665324.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659294.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654333.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654653.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654916.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656512.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659629.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670956.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661458.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667922.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660997.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664849.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667443.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661951.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665923.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656853.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665681.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654188.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655323.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664651.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670652.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000515825.1	GENCODE experimental pipeline
ENST00000656385.1	Assembled from SLRseq reads (SRP049776)
ENST00000665163.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662648.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653108.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671681.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000671681.1	Assembled from SLRseq reads (SRP049776)
ENST00000670219.1	Assembled from SLRseq reads (SRP049776)
ENST00000656529.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666320.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662272.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000393674.7	MANE_select
ENST00000513696.1	alternative 5' UTR
ENST00000505124.5	alternative 5' UTR
ENST00000396791.7	alternative 5' UTR
ENST00000503780.6	MANE_select
ENST00000514712.5	alternative 5' UTR
ENST00000515299.5	alternative 5' UTR
ENST00000503053.5	alternative 5' UTR
ENST00000508815.1	GENCODE experimental pipeline
ENST00000296522.11	MANE_select
ENST00000296521.11	GENCODE experimental pipeline
ENST00000422112.6	GENCODE experimental pipeline
ENST00000506910.5	GENCODE experimental pipeline
ENST00000664316.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000507483.1	GENCODE experimental pipeline
ENST00000274093.8	MANE_select
ENST00000505141.5	alternative 5' UTR
ENST00000359240.7	MANE_select
ENST00000359240.7	genebuild_only_MANE
ENST00000502940.1	alternative 5' UTR
ENST00000502305.5	alternative 5' UTR
ENST00000514159.1	alternative 5' UTR
ENST00000658752.1	Assembled from SLRseq reads (SRP049776)
ENST00000502661.1	QC splicing correct
ENST00000664617.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000506984.1	GENCODE experimental pipeline
ENST00000280187.11	alternative 5' UTR
ENST00000502754.5	alternative 5' UTR
ENST00000512509.5	GENCODE experimental pipeline
ENST00000512509.5	alternative 5' UTR
ENST00000505375.5	alternative 5' UTR
ENST00000505304.1	GENCODE experimental pipeline
ENST00000503563.1	alternative 5' UTR
ENST00000508596.6	GENCODE experimental pipeline
ENST00000508596.6	MANE_select
ENST00000507824.6	GENCODE experimental pipeline
ENST00000507824.6	QC splicing correct
ENST00000505894.2	GENCODE experimental pipeline
ENST00000505894.2	QC splicing correct
ENST00000280191.7	MANE_select
ENST00000296525.7	MANE_select
ENST00000512254.1	GENCODE experimental pipeline
ENST00000505299.1	alternative 5' UTR
ENST00000503362.2	MANE_select
ENST00000618562.2	MANE_select
ENST00000656694.1	Assembled from SLRseq reads (SRP049776)
ENST00000662794.1	Assembled from SLRseq reads (SRP049776)
ENST00000667713.1	Assembled from SLRseq reads (SRP049776)
ENST00000661162.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000508790.1	GENCODE experimental pipeline
ENST00000667277.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670563.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000264596.4	MANE_select
ENST00000264595.7	MANE_select
ENST00000654463.1	Assembled from SLRseq reads (SRP049776)
ENST00000668108.1	Assembled from SLRseq reads (SRP049776)
ENST00000671080.1	Assembled from SLRseq reads (SRP049776)
ENST00000666825.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667514.1	Assembled from SLRseq reads (SRP049776)
ENST00000507011.1	GENCODE experimental pipeline
ENST00000507011.1	QC splicing correct
ENST00000663768.1	Assembled from SLRseq reads (SRP049776)
ENST00000668548.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000668509.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000512547.1	GENCODE experimental pipeline
ENST00000655295.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000670601.1	Assembled from SLRseq reads (SRP049776)
ENST00000510211.1	GENCODE experimental pipeline
ENST00000507869.6	Assembled from SLRseq reads (SRP049776)
ENST00000669431.1	Assembled from SLRseq reads (SRP049776)
ENST00000512480.5	alternative 5' UTR
ENST00000511685.6	MANE_select
ENST00000652069.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000438320.7	MANE_select
ENST00000507543.5	QC splicing correct
ENST00000510370.5	alternative 5' UTR
ENST00000503182.5	alternative 5' UTR
ENST00000510307.5	alternative 5' UTR
ENST00000512766.5	QC splicing correct
ENST00000512766.5	alternative 5' UTR
ENST00000514754.5	alternative 5' UTR
ENST00000503820.5	alternative 5' UTR
ENST00000509218.5	QC splicing correct
ENST00000503988.1	QC splicing correct
ENST00000503988.1	alternative 5' UTR
ENST00000508994.1	alternative 5' UTR
ENST00000664752.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000403733.8	MANE_select
ENST00000403733.8	NP_079225
ENST00000323319.7	MANE_select
ENST00000541814.1	MANE_select
ENST00000541814.1	NP_001172078
ENST00000504169.2	MANE_select
ENST00000654924.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000457303.3	GENCODE experimental pipeline
ENST00000302327.4	MANE_select
ENST00000326397.10	MANE_select
ENST00000334690.11	MANE_select
ENST00000653139.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000308497.9	MANE_select
ENST00000505025.2	Assembled from SLRseq reads (SRP049776)
ENST00000505025.2	GENCODE experimental pipeline
ENST00000636429.1	confirm experimentally
ENST00000296741.7	MANE_select
ENST00000512353.1	GENCODE experimental pipeline
ENST00000662866.1	Assembled from SLRseq reads (SRP049776)
ENST00000664357.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000511465.1	GENCODE experimental pipeline
ENST00000670015.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662503.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667133.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667133.1	CAGE supported TSS
ENST00000663216.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662023.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658007.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000610683.5	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608785.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666394.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670119.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666261.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665219.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663586.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000393593.8	MANE_select
ENST00000505067.5	GENCODE experimental pipeline
ENST00000507523.5	alternative 5' UTR
ENST00000512020.5	NMD likely if extended
ENST00000510814.5	alternative 5' UTR
ENST00000506230.5	alternative 5' UTR
ENST00000509274.1	alternative 5' UTR
ENST00000504340.1	GENCODE experimental pipeline
ENST00000667665.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000605270.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000605270.6	Assembled from SLRseq reads (SRP049776)
ENST00000393585.6	alternative 5' UTR
ENST00000308394.9	MANE_select
ENST00000523916.5	alternative 5' UTR
ENST00000517513.5	alternative 5' UTR
ENST00000393588.8	alternative 5' UTR
ENST00000447121.2	alternative 5' UTR
ENST00000314970.11	MANE_select
ENST00000508001.1	GENCODE experimental pipeline
ENST00000281453.10	MANE_select
ENST00000281455.7	MANE_select
ENST00000515030.5	alternative 5' UTR
ENST00000506733.5	alternative 5' UTR
ENST00000504342.5	alternative 5' UTR
ENST00000513317.5	GENCODE experimental pipeline
ENST00000513317.5	alternative 5' UTR
ENST00000651765.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000656863.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663673.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000511703.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659446.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665689.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656525.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657860.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665575.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665575.1	GENCODE experimental pipeline
ENST00000668530.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663695.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653105.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653105.1	GENCODE experimental pipeline
ENST00000668573.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666149.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670177.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664938.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000515864.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654928.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671675.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667903.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661671.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653828.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662297.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656892.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000506479.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659755.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663526.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000507183.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657719.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000505053.1	GENCODE experimental pipeline
ENST00000657018.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000509017.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669292.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653526.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654591.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658238.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659579.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671007.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662812.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658229.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655383.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653071.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654241.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668769.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659379.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667481.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666765.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663431.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659637.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656669.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661043.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656521.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663811.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656297.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661234.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667441.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666450.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662468.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664605.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671285.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669852.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658467.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665213.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659890.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652785.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663336.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653833.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000506338.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661260.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670274.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656006.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655243.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668855.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658673.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669078.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668759.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664442.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653945.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671123.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655167.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656847.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654708.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653662.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661154.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665415.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667020.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652921.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664058.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665221.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657731.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656493.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664714.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665695.1	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000281456.11	MANE_select
ENST00000458385.7	MANE_select
ENST00000514798.1	GENCODE experimental pipeline
ENST00000503223.1	alternative 5' UTR
ENST00000652585.1	alternative 5' UTR
ENST00000505916.6	MANE_select
ENST00000505916.6	alternative 5' UTR
ENST00000511404.1	alternative 5' UTR
ENST00000507753.1	alternative 5' UTR
ENST00000506424.2	NMD likely if extended
ENST00000335174.6	MANE_select
ENST00000264689.11	MANE_select
ENST00000511485.5	GENCODE experimental pipeline
ENST00000511138.5	alternative 5' UTR
ENST00000511581.5	alternative 5' UTR
ENST00000307588.8	MANE_select
ENST00000651260.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000506876.5	QC splicing correct
ENST00000507501.5	CAGE supported TSS
ENST00000506962.3	CAGE supported TSS
ENST00000669100.1	Assembled from SLRseq reads (SRP049776)
ENST00000657486.1	Assembled from SLRseq reads (SRP049776)
ENST00000671042.1	Assembled from SLRseq reads (SRP049776)
ENST00000284767.12	MANE_select
ENST00000284770.10	NP_001244892.1
ENST00000620787.5	NP_001244891
ENST00000487184.1	GENCODE experimental pipeline
ENST00000445343.5	alternative 5' UTR
ENST00000439914.5	alternative 5' UTR
ENST00000444771.5	alternative 5' UTR
ENST00000430503.5	QC splicing correct
ENST00000450341.5	alternative 5' UTR
ENST00000445115.5	alternative 5' UTR
ENST00000457247.5	alternative 5' UTR
ENST00000456596.5	alternative 5' UTR
ENST00000414724.5	alternative 5' UTR
ENST00000393523.6	alternative 5' UTR
ENST00000415274.5	alternative 5' UTR
ENST00000456060.5	alternative 5' UTR
ENST00000476878.1	GENCODE experimental pipeline
ENST00000447277.1	GENCODE experimental pipeline
ENST00000456728.1	GENCODE experimental pipeline
ENST00000296795.8	MANE_select
ENST00000504367.1	GENCODE experimental pipeline
ENST00000508051.1	GENCODE experimental pipeline
ENST00000503432.5	alternative 5' UTR
ENST00000508379.5	alternative 5' UTR
ENST00000515078.5	alternative 5' UTR
ENST00000504330.5	alternative 5' UTR
ENST00000510790.5	alternative 5' UTR
ENST00000513212.5	alternative 5' UTR
ENST00000509574.5	alternative 5' UTR
ENST00000502970.5	GENCODE experimental pipeline
ENST00000378802.5	MANE_select
ENST00000511608.5	GENCODE experimental pipeline
ENST00000511608.5	QC splicing correct
ENST00000428196.5	alternative 5' UTR
ENST00000264690.11	MANE_select
ENST00000403665.7	MANE_select
ENST00000452239.1	GENCODE experimental pipeline
ENST00000264691.4	GENCODE experimental pipeline
ENST00000657917.1	Assembled from SLRseq reads (SRP049776)
ENST00000660474.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000307161.5	MANE_select
ENST00000441802.7	MANE_select
ENST00000507105.1	GENCODE experimental pipeline
ENST00000507662.1	GENCODE experimental pipeline
ENST00000509647.1	alternative 5' UTR
ENST00000667182.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000503037.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000503037.2	GENCODE experimental pipeline
ENST00000651047.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000670161.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668550.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666230.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000507776.1	GENCODE experimental pipeline
ENST00000658330.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000515222.1	GENCODE experimental pipeline
ENST00000503637.1	GENCODE experimental pipeline
ENST00000509058.1	GENCODE experimental pipeline
ENST00000503677.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000514767.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667648.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667648.1	GENCODE experimental pipeline
ENST00000659431.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663188.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654776.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665640.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000515660.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000515660.6	GENCODE experimental pipeline
ENST00000653020.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657902.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664977.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667027.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654552.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656759.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668469.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669092.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000507817.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658590.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656713.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667508.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663070.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663070.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000663129.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669490.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661067.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661504.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667430.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658671.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663333.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000505488.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663197.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654169.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658215.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666084.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668736.1	Assembled from SLRseq reads (SRP049776)
ENST00000509524.5	alternative 5' UTR
ENST00000326866.5	MANE_select
ENST00000394461.2	GENCODE experimental pipeline
ENST00000332517.4	MANE_select
ENST00000666556.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661756.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658558.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658558.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000660215.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663042.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658544.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663842.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660255.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662356.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667086.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664177.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659977.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657685.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655286.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662888.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666759.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657654.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656246.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000503458.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667883.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667802.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667003.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666634.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663631.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667271.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664234.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000624757.1	confirm experimentally
ENST00000505178.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000505178.2	GENCODE experimental pipeline
ENST00000504165.1	GENCODE experimental pipeline
ENST00000659127.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660244.1	Assembled from SLRseq reads (SRP049776)
ENST00000657714.1	Assembled from SLRseq reads (SRP049776)
ENST00000656003.1	Assembled from SLRseq reads (SRP049776)
ENST00000506276.5	GENCODE experimental pipeline
ENST00000511785.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661788.1	Assembled from SLRseq reads (SRP049776)
ENST00000503609.1	GENCODE experimental pipeline
ENST00000524583.5	QC splicing correct
ENST00000226798.9	MANE_select
ENST00000533157.5	QC splicing correct
ENST00000531991.6	QC splicing correct
ENST00000504750.6	MANE_select
ENST00000328278.4	MANE_select
ENST00000296824.4	MANE_select
ENST00000441693.2	alternative 5' UTR
ENST00000264932.11	MANE_select
ENST00000507522.1	QC splicing correct
ENST00000651543.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000512642.1	GENCODE experimental pipeline
ENST00000264933.9	MANE_select
ENST00000505113.6	EnsCodingFull|3P|XLOC_055527|TCONS_00218036:0.667696
ENST00000505113.6	Inferred contiguity up to upper TSS via 3 exons. Supported by PLAR model and intron data
ENST00000505113.6	See CCDS-1105
ENST00000675395.1	Inferred using intron data. NM_020731.4 extended up to upper TSS by infernce. Note cassette exon which is not well conserved is included in this isoform
ENST00000652417.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000511487.1	GENCODE experimental pipeline
ENST00000510441.1	GENCODE experimental pipeline
ENST00000512944.6	MANE_select
ENST00000508022.1	alternative 5' UTR
ENST00000509294.1	GENCODE experimental pipeline
ENST00000510714.1	CAGE supported TSS
ENST00000342584.3	CAGE supported TSS
ENST00000510604.1	CAGE supported TSS
ENST00000264938.8	MANE_select
ENST00000658086.1	Assembled from SLRseq reads (SRP049776)
ENST00000658225.1	Assembled from SLRseq reads (SRP049776)
ENST00000667998.1	Assembled from SLRseq reads (SRP049776)
ENST00000667376.1	Assembled from SLRseq reads (SRP049776)
ENST00000607005.6	Assembled from SLRseq reads (SRP049776)
ENST00000655313.1	Assembled from SLRseq reads (SRP049776)
ENST00000668009.1	Assembled from SLRseq reads (SRP049776)
ENST00000652670.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000515085.1	GENCODE experimental pipeline
ENST00000264935.6	MANE_select
ENST00000499639.2	GENCODE experimental pipeline
ENST00000360578.7	MANE_select
ENST00000508859.8	MANE_select
ENST00000508859.8	QC splicing correct
ENST00000508859.8	confirm experimentally
ENST00000652055.1	alternative 5' UTR
ENST00000651083.1	alternative 5' UTR
ENST00000503758.6	QC splicing correct
ENST00000493082.5	QC splicing correct
ENST00000467963.6	MANE_select
ENST00000166345.8	MANE_select
ENST00000513435.1	GENCODE experimental pipeline
ENST00000508430.1	GENCODE experimental pipeline
ENST00000662823.1	Assembled from SLRseq reads (SRP049776)
ENST00000507989.1	GENCODE experimental pipeline
ENST00000511936.1	GENCODE experimental pipeline
ENST00000296849.10	MANE_select
ENST00000264930.10	MANE_select
ENST00000264930.10	QC splicing correct
ENST00000264930.10	non canonical conserved
ENST00000634447.1	non canonical conserved
ENST00000510943.3	non canonical TEC
ENST00000512572.1	GENCODE experimental pipeline
ENST00000304460.11	MANE_select
ENST00000324642.4	MANE_select
ENST00000666708.1	CAGE supported TSS
ENST00000310581.10	MANE_select
ENST00000320895.10	MANE_select
ENST00000507195.5	\
ENST00000656081.1	Assembled from SLRseq reads (SRP049776)
ENST00000653645.1	Assembled from SLRseq reads (SRP049776)
ENST00000668064.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670452.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667031.1	Assembled from SLRseq reads (SRP049776)
ENST00000523692.1	alternative 5' UTR
ENST00000624349.1	confirm experimentally
ENST00000270349.12	MANE_select
ENST00000270349.12	QC splicing correct
ENST00000283415.4	MANE_select
ENST00000652578.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000505059.7	MANE_select
ENST00000505059.7	QC splicing correct
ENST00000505818.1	alternative 5' UTR
ENST00000508987.1	alternative 5' UTR
ENST00000382647.7	QC splicing correct
ENST00000382647.7	alternative 5' UTR
ENST00000510999.1	alternative 5' UTR
ENST00000274137.10	MANE_select
ENST00000623526.1	confirm experimentally
ENST00000231357.7	MANE_select
ENST00000513692.5	alternative 5' UTR
ENST00000505790.5	alternative 5' UTR
ENST00000662909.1	Assembled from SLRseq reads (SRP049776)
ENST00000669344.1	Assembled from SLRseq reads (SRP049776)
ENST00000668132.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660811.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652866.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660942.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000511693.1	GENCODE experimental pipeline
ENST00000653000.1	Assembled from SLRseq reads (SRP049776)
ENST00000513419.1	GENCODE experimental pipeline
ENST00000660145.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668334.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657760.1	Assembled from SLRseq reads (SRP049776)
ENST00000660496.1	Assembled from SLRseq reads (SRP049776)
ENST00000658890.1	Assembled from SLRseq reads (SRP049776)
ENST00000663791.1	Assembled from SLRseq reads (SRP049776)
ENST00000511698.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000511698.2	GENCODE experimental pipeline
ENST00000302057.6	MANE_select
ENST00000302057.6	alternative 3' UTR
ENST00000650439.1	alternative 3' UTR
ENST00000397835.4	QC splicing correct
ENST00000397835.4	confirm experimentally
ENST00000652017.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000664294.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000515086.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000515086.2	GENCODE experimental pipeline
ENST00000652864.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662836.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000512521.1	GENCODE experimental pipeline
ENST00000302006.4	MANE_select
ENST00000513859.1	GENCODE experimental pipeline
ENST00000666998.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000503415.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000503415.2	GENCODE experimental pipeline
ENST00000651524.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000661208.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653036.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000513925.1	GENCODE experimental pipeline
ENST00000505404.1	QC splicing correct
ENST00000511721.1	GENCODE experimental pipeline
ENST00000667766.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659550.1	Assembled from RACEseq reads
ENST00000658399.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657166.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668023.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662011.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656591.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670808.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656049.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666520.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654932.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666689.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000507599.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660582.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000511514.1	GENCODE experimental pipeline
ENST00000654665.1	Assembled from SLRseq reads (SRP049776)
ENST00000653379.1	Assembled from SLRseq reads (SRP049776)
ENST00000656100.1	Assembled from SLRseq reads (SRP049776)
ENST00000512155.2	Assembled from SLRseq reads (SRP049776)
ENST00000274181.7	MANE_select
ENST00000669435.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000296564.9	MANE_select
ENST00000296564.9	non canonical U12
ENST00000659085.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000624837.1	confirm experimentally
ENST00000507444.1	GENCODE experimental pipeline
ENST00000255764.4	MANE_select
ENST00000653641.1	Assembled from SLRseq reads (SRP049776)
ENST00000399816.4	MANE_select
ENST00000513844.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000507628.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659049.1	Assembled from SLRseq reads (SRP049776)
ENST00000668899.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666121.1	Assembled from SLRseq reads (SRP049776)
ENST00000652158.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000665924.1	Assembled from SLRseq reads (SRP049776)
ENST00000667226.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667226.1	Assembled from SLRseq reads (SRP049776)
ENST00000660957.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660957.2	Extended with Assembled from SLRseq reads (SRP049776)
ENST00000664093.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664093.1	Assembled from SLRseq reads (SRP049776)
ENST00000661215.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657872.1	Assembled from SLRseq reads (SRP049776)
ENST00000659719.1	Assembled from SLRseq reads (SRP049776)
ENST00000671065.1	Assembled from SLRseq reads (SRP049776)
ENST00000659245.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659245.1	Assembled from SLRseq reads (SRP049776)
ENST00000658539.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658539.1	Assembled from SLRseq reads (SRP049776)
ENST00000658850.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669289.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659556.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000264670.11	MANE_select
ENST00000506139.5	GENCODE experimental pipeline
ENST00000274192.7	MANE_select
ENST00000503989.1	GENCODE experimental pipeline
ENST00000664592.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667865.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000514788.1	GENCODE experimental pipeline
ENST00000230859.8	CAGE supported TSS
ENST00000230859.8	MANE_select
ENST00000515721.1	alternative 5' UTR
ENST00000660855.1	Assembled from SLRseq reads (SRP049776)
ENST00000652281.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000651243.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000651243.2	Assembled from SLRseq reads (SRP049776)
ENST00000655466.1	Assembled from SLRseq reads (SRP049776)
ENST00000510622.1	GENCODE experimental pipeline
ENST00000510622.1	QC splicing correct
ENST00000660096.1	Assembled from SLRseq reads (SRP049776)
ENST00000650863.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000650671.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000512746.1	GENCODE experimental pipeline
ENST00000504494.1	GENCODE experimental pipeline
ENST00000666886.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000513219.1	GENCODE experimental pipeline
ENST00000657298.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655220.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000338316.9	MANE_select
ENST00000513693.1	GENCODE experimental pipeline
ENST00000514105.2	QC splicing correct
ENST00000399810.7	MANE_select
ENST00000509627.1	GENCODE experimental pipeline
ENST00000514220.5	GENCODE experimental pipeline
ENST00000440940.7	MANE_select
ENST00000502550.5	alternative 5' UTR
ENST00000506877.1	alternative 5' UTR
ENST00000512217.5	alternative 5' UTR
ENST00000506115.1	GENCODE experimental pipeline
ENST00000264669.10	MANE_select
ENST00000504695.1	alternative 5' UTR
ENST00000669941.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000623003.1	confirm experimentally
ENST00000624798.1	confirm experimentally
ENST00000654773.1	Assembled from SLRseq reads (SRP049776)
ENST00000667556.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669566.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660398.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669529.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669539.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669668.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000502001.2	GENCODE experimental pipeline
ENST00000664641.1	Assembled from SLRseq reads (SRP049776)
ENST00000670196.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652260.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000657075.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659580.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654467.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000623979.1	confirm experimentally
ENST00000625179.1	confirm experimentally
ENST00000624775.1	confirm experimentally
ENST00000622919.1	confirm experimentally
ENST00000623220.1	confirm experimentally
ENST00000623386.1	confirm experimentally
ENST00000623014.1	confirm experimentally
ENST00000624223.1	confirm experimentally
ENST00000669656.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651480.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000624494.1	confirm experimentally
ENST00000382496.10	MANE_select
ENST00000652226.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000513968.4	alternative 5' UTR
ENST00000515377.1	GENCODE experimental pipeline
ENST00000655411.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000504182.2	GENCODE experimental pipeline
ENST00000382492.4	MANE_select
ENST00000514078.1	alternative 5' UTR
ENST00000506620.1	alternative 5' UTR
ENST00000660091.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669717.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654793.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661300.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650908.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000623143.1	confirm experimentally
ENST00000624959.1	confirm experimentally
ENST00000624400.1	confirm experimentally
ENST00000506299.1	GENCODE experimental pipeline
ENST00000623704.1	confirm experimentally
ENST00000624258.1	confirm experimentally
ENST00000511437.6	MANE_select
ENST00000506108.2	QC splicing correct
ENST00000509915.1	GENCODE experimental pipeline
ENST00000280326.9	MANE_select
ENST00000296658.4	MANE_select
ENST00000623897.1	confirm experimentally
ENST00000274140.10	MANE_select
ENST00000503804.5	alternative 5' UTR
ENST00000274134.5	MANE_select
ENST00000510562.1	GENCODE experimental pipeline
ENST00000651900.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000506021.4	GENCODE experimental pipeline
ENST00000624673.1	confirm experimentally
ENST00000625015.1	confirm experimentally
ENST00000296657.7	MANE_select
ENST00000296657.7	QC splicing correct
ENST00000296657.7	not best-in-genome evidence
ENST00000504806.5	QC splicing correct
ENST00000504806.5	not best-in-genome evidence
ENST00000506304.1	GENCODE experimental pipeline
ENST00000623327.1	confirm experimentally
ENST00000623397.1	confirm experimentally
ENST00000230895.11	MANE_select
ENST00000510546.1	GENCODE experimental pipeline
ENST00000503953.1	GENCODE experimental pipeline
ENST00000304623.13	MANE_select
ENST00000513598.5	alternative 5' UTR
ENST00000513051.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664069.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658959.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000513283.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000265104.5	MANE_select
ENST00000681290.1	CAGE supported TSS
ENST00000681290.1	upstream ATG
ENST00000504001.3	QC splicing correct
ENST00000503244.2	Assembled from SLRseq reads (SRP049776)
ENST00000344204.9	MANE_select
ENST00000669641.1	Assembled from SLRseq reads (SRP049776)
ENST00000274217.4	FLJ11127
ENST00000274217.4	MANE_select
ENST00000513825.1	novel transcript
ENST00000506258.2	GENCODE experimental pipeline
ENST00000506258.2	putative novel transcript
ENST00000284274.5	MANE_select
ENST00000284268.8	LR annotation
ENST00000284268.8	MANE_select
ENST00000505140.1	not organism-supported
ENST00000654896.1	Assembled from SLRseq reads (SRP049776)
ENST00000659482.1	Assembled from SLRseq reads (SRP049776)
ENST00000659286.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651224.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000502680.1	GENCODE experimental pipeline
ENST00000671652.1	Assembled from SLRseq reads (SRP049776)
ENST00000504595.2	MANE_select
ENST00000509228.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671066.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000332432.9	MANE_select
ENST00000332432.9	QC splicing correct
ENST00000502834.1	GENCODE experimental pipeline
ENST00000308683.3	MANE_select
ENST00000306320.10	MANE_select
ENST00000653650.1	Assembled from SLRseq reads (SRP049776)
ENST00000513610.6	MANE_select
ENST00000505695.5	alternative 5' UTR
ENST00000507288.1	GENCODE experimental pipeline
ENST00000606445.1	alternative 5' UTR
ENST00000322611.4	MANE_select
ENST00000655365.1	Assembled from SLRseq reads (SRP049776)
ENST00000668327.1	Assembled from SLRseq reads (SRP049776)
ENST00000661332.1	Assembled from SLRseq reads (SRP049776)
ENST00000665920.1	Assembled from SLRseq reads (SRP049776)
ENST00000399760.2	FLJ34047
ENST00000665653.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665489.1	Assembled from SLRseq reads (SRP049776)
ENST00000667677.1	Assembled from SLRseq reads (SRP049776)
ENST00000653016.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000511182.1	GENCODE experimental pipeline
ENST00000659183.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671029.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652939.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663823.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668161.1	Assembled from SLRseq reads (SRP049776)
ENST00000668135.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666256.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669610.1	Assembled from SLRseq reads (SRP049776)
ENST00000653381.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659626.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669953.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658949.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663179.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653252.1	Assembled from SLRseq reads (SRP049776)
ENST00000600799.3	MANE_select
ENST00000598383.3	MANE_select
ENST00000668703.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665617.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000514771.6	CAGE supported TSS
ENST00000662053.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670782.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658985.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652872.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653777.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665296.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652301.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000655908.1	Assembled from SLRseq reads (SRP049776)
ENST00000654406.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657374.1	Assembled from SLRseq reads (SRP049776)
ENST00000661046.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662878.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000382275.6	MANE_select
ENST00000507958.5	alternative 5' UTR
ENST00000515257.6	QC splicing correct
ENST00000652475.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000671155.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668626.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659986.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657947.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664531.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657383.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665581.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667653.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664411.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668363.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659281.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661358.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653395.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660596.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668829.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666214.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662082.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653469.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654310.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656809.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660152.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662354.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663898.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666245.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661443.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665164.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655312.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665750.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663691.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667696.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661008.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657737.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664874.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668352.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660427.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660453.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660211.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664930.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661497.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654483.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667015.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669224.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662556.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659352.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660411.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662453.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667733.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000512688.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665740.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670749.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656908.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667230.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656233.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663927.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661226.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669262.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655570.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658934.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652820.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666241.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665726.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666246.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657864.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659988.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668593.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669525.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654633.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000671578.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655853.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661281.1	Assembled from SLRseq reads (SRP049776)
ENST00000663482.1	Assembled from SLRseq reads (SRP049776)
ENST00000503488.2	QC splicing correct
ENST00000503488.2	not best-in-genome evidence
ENST00000667480.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000652767.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000623455.1	confirm experimentally
ENST00000504376.6	alternative 5' UTR
ENST00000382254.6	MANE_select
ENST00000524042.1	QC splicing correct
ENST00000524042.1	not best-in-genome evidence
ENST00000664121.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668771.1	Assembled from SLRseq reads (SRP049776)
ENST00000665075.1	Assembled from SLRseq reads (SRP049776)
ENST00000659392.1	Assembled from SLRseq reads (SRP049776)
ENST00000669949.1	Assembled from SLRseq reads (SRP049776)
ENST00000660998.1	Assembled from SLRseq reads (SRP049776)
ENST00000507674.1	GENCODE experimental pipeline
ENST00000507674.1	QC splicing correct
ENST00000502755.5	alternative 5' UTR
ENST00000296682.4	MANE_select
ENST00000652008.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000652008.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000657726.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666970.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671562.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000264463.8	MANE_select
ENST00000510391.1	GENCODE experimental pipeline
ENST00000662665.1	Assembled from SLRseq reads (SRP049776)
ENST00000651142.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000507600.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670589.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662466.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658074.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000507926.1	QC splicing correct
ENST00000658114.1	Assembled from SLRseq reads (SRP049776)
ENST00000668718.1	Assembled from SLRseq reads (SRP049776)
ENST00000651229.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000231021.9	MANE_select
ENST00000513289.5	alternative 5' UTR
ENST00000511822.1	alternative 5' UTR
ENST00000655107.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659077.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000514844.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657424.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653835.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657173.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660307.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669423.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659860.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652841.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656783.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000510165.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670554.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665451.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667624.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667420.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660639.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668406.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664566.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659489.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000503107.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670840.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667264.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657375.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654039.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668103.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664501.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661698.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655438.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658312.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671061.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000510512.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650976.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000664667.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000512849.1	QC splicing correct
ENST00000653909.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660682.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666077.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670424.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658670.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658190.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656922.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000602801.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666790.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671215.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669295.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000565798.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000565798.3	non canonical TEC
ENST00000661619.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656794.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664117.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651494.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000666312.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658621.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655290.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660483.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668461.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657377.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655577.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653940.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659417.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668326.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669821.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664589.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669258.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671200.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654073.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668096.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664538.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669028.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656393.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662266.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667811.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659199.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658307.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000506492.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658396.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669150.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654399.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000623357.1	confirm experimentally
ENST00000667165.1	Assembled from SLRseq reads (SRP049776)
ENST00000659953.1	Assembled from SLRseq reads (SRP049776)
ENST00000519101.1	not organism-supported
ENST00000265071.3	MANE_select
ENST00000344624.8	MANE_select
ENST00000510178.1	tandem repeats in the fourth exon
ENST00000507438.5	alternative 5' UTR
ENST00000325366.14	FLJ11193
ENST00000325366.14	MANE_select
ENST00000624768.1	confirm experimentally
ENST00000438447.2	MANE_select
ENST00000513910.1	alternative 5' UTR
ENST00000509750.1	GENCODE experimental pipeline
ENST00000265070.7	MANE_select
ENST00000382142.8	MANE_select
ENST00000265069.13	MANE_select
ENST00000506237.5	alternative 5' UTR
ENST00000512913.5	alternative 5' UTR
ENST00000265073.9	MANE_select
ENST00000515355.5	alternative 5' UTR
ENST00000502897.5	alternative 5' UTR
ENST00000510442.1	alternative 5' UTR
ENST00000657349.1	Assembled from SLRseq reads (SRP049776)
ENST00000265074.13	MANE_select
ENST00000415167.2	NP_000899.1
ENST00000507141.1	GENCODE experimental pipeline
ENST00000666525.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666525.1	GENCODE experimental pipeline
ENST00000505339.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657441.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000510327.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652363.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000655122.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000511054.1	GENCODE experimental pipeline
ENST00000661759.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667183.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000502553.5	alternative 5' UTR
ENST00000514259.5	alternative 5' UTR
ENST00000455217.6	GENCODE experimental pipeline
ENST00000265112.8	MANE_select
ENST00000504830.6	MANE_select
ENST00000330120.5	MANE_select
ENST00000296589.9	MANE_select
ENST00000335606.11	MANE_select
ENST00000514195.1	non canonical polymorphism
ENST00000502637.5	GENCODE experimental pipeline
ENST00000382065.8	CAGE supported TSS
ENST00000382065.8	MANE_select
ENST00000512782.1	QC splicing correct
ENST00000658746.1	Assembled from SLRseq reads (SRP049776)
ENST00000265109.8	MANE_select
ENST00000265109.8	alternative 5' UTR
ENST00000514527.5	alternative 5' UTR
ENST00000513974.5	alternative 5' UTR
ENST00000514873.5	alternative 5' UTR
ENST00000503673.5	alternative 5' UTR
ENST00000504052.5	alternative 5' UTR
ENST00000512305.5	alternative 5' UTR
ENST00000514036.5	alternative 5' UTR
ENST00000508315.5	alternative 5' UTR
ENST00000512625.5	alternative 5' UTR
ENST00000382038.7	MANE_select
ENST00000341754.8	alternative 5' UTR
ENST00000336767.6	MANE_select
ENST00000648817.1	CAGE supported TSS
ENST00000648817.1	LR annotation
ENST00000648817.1	MANE_select
ENST00000231420.11	MANE_select
ENST00000618457.5	MANE_select
ENST00000514206.5	alternative 5' UTR
ENST00000509839.5	alternative 5' UTR
ENST00000503330.5	alternative 5' UTR
ENST00000504500.5	alternative 5' UTR
ENST00000515839.1	alternative 5' UTR
ENST00000282469.10	FLJ23577
ENST00000356031.8	MANE_select
ENST00000440995.6	GENCODE experimental pipeline
ENST00000504054.1	GENCODE experimental pipeline
ENST00000506526.5	alternative 5' UTR
ENST00000511031.1	GENCODE experimental pipeline
ENST00000515665.1	alternative 5' UTR
ENST00000303115.8	MANE_select
ENST00000651391.1	MANE_select
ENST00000651391.1	genebuild_only_MANE
ENST00000513623.5	alternative 5' UTR
ENST00000503269.1	GENCODE experimental pipeline
ENST00000274278.8	MANE_select
ENST00000507113.5	GENCODE experimental pipeline
ENST00000282507.8	MANE_select
ENST00000513300.5	GENCODE experimental pipeline
ENST00000515131.1	alternative 5' UTR
ENST00000296603.5	MANE_select
ENST00000503535.1	Final 58 bp of EST evidence does not align to this or any region of the genome
ENST00000274255.11	MANE_select
ENST00000381937.9	MANE_select
ENST00000397338.5	FLJ30596
ENST00000506945.5	GENCODE experimental pipeline
ENST00000506945.5	alternative 5' UTR
ENST00000502355.5	QC splicing correct
ENST00000511088.1	GENCODE experimental pipeline
ENST00000511088.1	alternative 5' UTR
ENST00000296604.8	FLJ25422
ENST00000296604.8	MANE_select
ENST00000505865.1	alternative 5' UTR
ENST00000653627.1	Assembled from SLRseq reads (SRP049776)
ENST00000680318.1	CAGE supported TSS
ENST00000680318.1	alternative 5' UTR
ENST00000680318.1	slrseq_align_id:3706921|asmbl_197086_PASA_cluster_17435
ENST00000681909.1	intropolis_filtered
ENST00000513903.5	alternative 5' UTR
ENST00000681795.1	Snaptron_GTEX
ENST00000681795.1	intropolis_filtered
ENST00000680205.1	slrseq_align_id:3706941|asmbl_197106_PASA_cluster_17435
ENST00000680064.1	slrseq_align_id:3706936|asmbl_197101_PASA_cluster_17435
ENST00000680878.1	slrseq_align_id:3706940|asmbl_197105_PASA_cluster_17435
ENST00000680125.1	slrseq_align_id:3706923|asmbl_197088_PASA_cluster_17435
ENST00000612708.5	slrseq_align_id:3706935|asmbl_197100_PASA_cluster_17435
ENST00000681633.1	slrseq_align_id:3706932|asmbl_197097_PASA_cluster_17435
ENST00000680876.1	slrseq_align_id:3706933|asmbl_197098_PASA_cluster_17435
ENST00000680232.1	slrseq_align_id:3706931|asmbl_197096_PASA_cluster_17435
ENST00000681776.1	alternative 5' UTR
ENST00000502864.6	slrseq_align_id:3706944|asmbl_197109PASA_cluster_17435_
ENST00000681775.1	slrseq_align_id:3706945|asmbl_197110_PASA_cluster_17435
ENST00000679784.1	slrseq_align_id:3706928|asmbl_197093_PASA_cluster_17435
ENST00000680048.1	slrseq_align_id:3706927|asmbl_197092_PASA_cluster_17435
ENST00000680655.1	slrseq_align_id:3706925|asmbl_197090_PASA_cluster_17435
ENST00000681926.1	alternative 5' UTR
ENST00000681926.1	slrseq_align_id:3706937|asmbl_197102_PASA_cluster_17435
ENST00000679958.1	Snaptron_GTEX
ENST00000679958.1	intropolis_filtered
ENST00000265113.9	MANE_select
ENST00000504121.5	alternative 5' UTR
ENST00000512374.1	NP_001160168.1
ENST00000506725.1	alternative 5' UTR
ENST00000680711.1	Snaptron_GTEX
ENST00000680711.1	intropolis_filtered
ENST00000613445.5	alternative 5' UTR
ENST00000613445.5	slrseq_align_id:3706929|asmbl_197094_PASA_cluster_17435
ENST00000679983.1	alternative 5' UTR
ENST00000679983.1	slrseq_align_id:3706919|asmbl_197084_PASA_cluster_17435
ENST00000505202.5	alternative 5' UTR
ENST00000681814.1	slrseq_align_id:3706938|asmbl_197103_PASA_cluster_17435
ENST00000679992.1	alternative 5' UTR
ENST00000679992.1	slrseq_align_id:3706922|asmbl_197087_PASA_cluster_17435
ENST00000381918.4	alternative 5' UTR
ENST00000381918.4	slrseq_align_id:3706920|asmbl_197085_PASA_cluster_17435
ENST00000513646.1	alternative 5' UTR
ENST00000681848.1	Snaptron_GTEX
ENST00000681848.1	intropolis_filtered
ENST00000680212.1	Snaptron_GTEX
ENST00000680212.1	intropolis_filtered
ENST00000680908.1	Snaptron_GTEX
ENST00000680908.1	intropolis_filtered
ENST00000680527.1	Snaptron_GTEX
ENST00000680527.1	intropolis_filtered
ENST00000679423.1	Snaptron_GTEX
ENST00000679423.1	intropolis_filtered
ENST00000681666.1	Snaptron_GTEX
ENST00000681666.1	intropolis_filtered
ENST00000681388.1	Snaptron_GTEX
ENST00000681388.1	intropolis_filtered
ENST00000681623.1	Snaptron_GTEX
ENST00000681623.1	intropolis_filtered
ENST00000681726.1	Snaptron_GTEX
ENST00000681726.1	intropolis_filtered
ENST00000680016.1	Snaptron_GTEX
ENST00000680016.1	intropolis_filtered
ENST00000624112.2	slrseq_align_id:3706930|asmbl_197095_PASA_cluster_17435
ENST00000681373.1	Snaptron_GTEX
ENST00000681373.1	intropolis_filtered
ENST00000681701.1	Snaptron_GTEX
ENST00000681701.1	intropolis_filtered
ENST00000679487.1	Snaptron_GTEX
ENST00000679487.1	intropolis_filtered
ENST00000680835.1	Snaptron_GTEX
ENST00000680835.1	intropolis_filtered
ENST00000681440.1	Snaptron_GTEX
ENST00000681440.1	intropolis_filtered
ENST00000681854.1	Snaptron_GTEX
ENST00000681854.1	intropolis_filtered
ENST00000680890.1	Snaptron_GTEX
ENST00000680890.1	intropolis_filtered
ENST00000681480.1	Snaptron_GTEX
ENST00000681480.1	intropolis_filtered
ENST00000679384.1	Snaptron_GTEX
ENST00000679384.1	intropolis_filtered
ENST00000680369.1	Snaptron_GTEX
ENST00000680369.1	intropolis_filtered
ENST00000679852.1	Snaptron_GTEX
ENST00000679852.1	intropolis_filtered
ENST00000680568.1	slrseq_align_id:3706942|asmbl_197107_PASA_cluster_17435
ENST00000512329.2	Assembled from SLRseq reads (SRP049776)
ENST00000659180.1	Assembled from SLRseq reads (SRP049776)
ENST00000282516.13	MANE_select
ENST00000508244.5	NP_075561.3
ENST00000651892.2	CAGE supported TSS
ENST00000651892.2	MANE_select
ENST00000650795.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000659285.1	Assembled from SLRseq reads (SRP049776)
ENST00000231498.8	MANE_select
ENST00000504564.1	GENCODE experimental pipeline
ENST00000265107.9	MANE_select
ENST00000514532.3	Assembled from SLRseq reads (SRP049776)
ENST00000655756.1	Assembled from SLRseq reads (SRP049776)
ENST00000326524.7	MANE_select
ENST00000515058.5	CCDS3923.1
ENST00000510177.5	alternative 5' UTR
ENST00000502572.1	alternative 5' UTR
ENST00000669619.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666505.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000513039.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652286.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000669275.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662564.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671526.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000508853.1	GENCODE experimental pipeline
ENST00000322350.10	MANE_select
ENST00000506135.5	alternative 5' UTR
ENST00000514476.1	alternative 5' UTR
ENST00000505267.2	QC splicing correct
ENST00000656982.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653716.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671615.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000510137.1	GENCODE experimental pipeline
ENST00000453190.7	MANE_select
ENST00000453190.7	alternative 5' UTR
ENST00000506990.5	alternative 5' UTR
ENST00000511561.1	alternative 5' UTR
ENST00000670079.1	Assembled from SLRseq reads (SRP049776)
ENST00000660661.1	Assembled from SLRseq reads (SRP049776)
ENST00000652922.1	Assembled from SLRseq reads (SRP049776)
ENST00000666123.1	Assembled from SLRseq reads (SRP049776)
ENST00000658674.1	Assembled from SLRseq reads (SRP049776)
ENST00000671056.1	Assembled from SLRseq reads (SRP049776)
ENST00000670215.1	Assembled from SLRseq reads (SRP049776)
ENST00000671098.1	Assembled from SLRseq reads (SRP049776)
ENST00000657740.1	Assembled from SLRseq reads (SRP049776)
ENST00000661968.1	Assembled from SLRseq reads (SRP049776)
ENST00000669394.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662290.1	Assembled from SLRseq reads (SRP049776)
ENST00000636516.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654447.1	Assembled from SLRseq reads (SRP049776)
ENST00000660306.1	Assembled from SLRseq reads (SRP049776)
ENST00000514586.1	GENCODE experimental pipeline
ENST00000274276.8	MANE_select
ENST00000357387.8	MANE_select
ENST00000659554.1	Assembled from RACEseq reads
ENST00000512982.4	CAGE supported TSS
ENST00000512982.4	LR annotation
ENST00000512982.4	MANE_select
ENST00000646045.2	CAGE supported TSS
ENST00000646045.2	LR annotation
ENST00000515010.5	alternative 5' UTR
ENST00000510188.1	alternative 5' UTR
ENST00000512138.1	alternative 5' UTR
ENST00000506557.5	alternative 5' UTR
ENST00000509072.5	alternative 5' UTR
ENST00000504542.1	alternative 5' UTR
ENST00000263408.5	MANE_select
ENST00000320816.11	MANE_select
ENST00000511792.5	alternative 5' UTR
ENST00000503513.5	alternative 5' UTR
ENST00000515700.5	alternative 5' UTR
ENST00000603514.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000604954.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000637924.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000508437.1	GENCODE experimental pipeline
ENST00000665809.1	Assembled from SLRseq reads (SRP049776)
ENST00000648975.1	CAGE supported TSS
ENST00000337702.5	MANE_select
ENST00000302472.4	MANE_select
ENST00000274242.10	MANE_select
ENST00000511787.1	GENCODE experimental pipeline
ENST00000509877.5	novel protein
ENST00000381677.4	GENCODE experimental pipeline
ENST00000254691.10	MANE_select
ENST00000313164.10	MANE_select
ENST00000489457.1	GENCODE experimental pipeline
ENST00000399564.5	MANE_select
ENST00000337836.10	MANE_select
ENST00000337836.10	alternative 5' UTR
ENST00000263413.7	gomi
ENST00000417809.1	GENCODE experimental pipeline
ENST00000417809.1	alternative 5' UTR
ENST00000433294.1	GENCODE experimental pipeline
ENST00000433294.1	QC splicing correct
ENST00000433294.1	alternative 5' UTR
ENST00000377801.8	MANE_select
ENST00000196371.10	MANE_select
ENST00000651810.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000654321.1	Assembled from SLRseq reads (SRP049776)
ENST00000508458.2	GENCODE experimental pipeline- initial annotator
ENST00000381647.7	MANE_select
ENST00000281623.8	MANE_select
ENST00000230882.9	MANE_select
ENST00000361970.10	MANE_select
ENST00000514985.6	MANE_select
ENST00000511224.5	alternative 5' UTR
ENST00000506577.5	alternative 5' UTR
ENST00000507920.5	QC splicing correct
ENST00000514218.5	alternative 5' UTR
ENST00000510965.1	alternative 5' UTR
ENST00000515626.5	alternative 5' UTR
ENST00000653383.1	Assembled from SLRseq reads (SRP049776)
ENST00000668084.1	Assembled from SLRseq reads (SRP049776)
ENST00000651306.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000659142.1	Assembled from SLRseq reads (SRP049776)
ENST00000655830.1	Assembled from SLRseq reads (SRP049776)
ENST00000657195.1	Assembled from SLRseq reads (SRP049776)
ENST00000657056.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654466.1	Assembled from SLRseq reads (SRP049776)
ENST00000503152.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665537.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000509036.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662658.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662658.1	GENCODE experimental pipeline
ENST00000666188.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668110.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000506791.1	GENCODE experimental pipeline
ENST00000506791.1	QC splicing correct
ENST00000663251.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000616064.2	MANE_select
ENST00000657793.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658237.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659040.1	Assembled from SLRseq reads (SRP049776)
ENST00000669102.1	Assembled from SLRseq reads (SRP049776)
ENST00000508795.1	QC splicing correct
ENST00000507393.1	GENCODE experimental pipeline
ENST00000515326.5	alternative 5' UTR
ENST00000508259.5	alternative 5' UTR
ENST00000505606.6	alternative 5' UTR
ENST00000509634.5	alternative 5' UTR
ENST00000509341.5	alternative 5' UTR
ENST00000326035.6	MANE_select
ENST00000512796.1	alternative 5' UTR
ENST00000325110.11	MANE_select
ENST00000511774.1	alternative 5' UTR
ENST00000361115.4	MANE_select
ENST00000513525.1	GENCODE experimental pipeline
ENST00000500337.6	alternative 5' UTR
ENST00000397080.8	MANE_select
ENST00000512085.5	alternative 5' UTR
ENST00000506860.1	alternative 5' UTR
ENST00000664081.1	Assembled from SLRseq reads (SRP049776)
ENST00000306862.7	MANE_select
ENST00000503655.2	QC splicing correct
ENST00000509489.1	GENCODE experimental pipeline
ENST00000306846.8	MANE_select
ENST00000338972.8	CCDS3948.1
ENST00000338972.8	NP_899152.1
ENST00000514514.5	QC splicing correct
ENST00000504639.5	QC splicing correct
ENST00000511321.5	alternative 5' UTR
ENST00000508537.1	alternative 5' UTR
ENST00000515338.1	alternative 5' UTR
ENST00000513560.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656020.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000515466.1	GENCODE experimental pipeline
ENST00000503484.6	Assembled from SLRseq reads (SRP049776)
ENST00000668986.1	Assembled from SLRseq reads (SRP049776)
ENST00000506247.1	GENCODE experimental pipeline
ENST00000505678.6	QC splicing correct
ENST00000505678.6	alternative 5' UTR
ENST00000512422.5	alternative 5' UTR
ENST00000670904.1	alternative 5' UTR
ENST00000653251.1	alternative 5' UTR
ENST00000344920.9	MANE_select
ENST00000344920.9	alternative 5' UTR
ENST00000512996.6	QC splicing correct
ENST00000671668.1	alternative 5' UTR
ENST00000662525.1	alternative 5' UTR
ENST00000669601.1	alternative 5' UTR
ENST00000656666.1	alternative 5' UTR
ENST00000515208.1	GENCODE experimental pipeline
ENST00000515208.1	alternative 5' UTR
ENST00000503651.2	GENCODE experimental pipeline
ENST00000503059.1	QC splicing correct
ENST00000264664.5	MANE_select
ENST00000513107.1	alternative 5' UTR
ENST00000671607.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000510758.1	GENCODE experimental pipeline
ENST00000505050.1	GENCODE experimental pipeline
ENST00000656315.1	Assembled from RACEseq reads
ENST00000659161.1	Assembled from SLRseq reads (SRP049776)
ENST00000507110.6	MANE_select
ENST00000230914.4	QC splicing correct
ENST00000671050.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000303230.6	MANE_select
ENST00000638054.1	infant_bam fetal_bam
ENST00000510987.1	GENCODE experimental pipeline
ENST00000303221.10	MANE_select
ENST00000514111.1	GENCODE experimental pipeline
ENST00000281631.10	MANE_select
ENST00000515166.5	QC splicing correct
ENST00000506534.2	GENCODE experimental pipeline
ENST00000558403.1	QC splicing correct
ENST00000230658.12	MANE_select
ENST00000511384.1	not organism-supported
ENST00000666280.1	Assembled from SLRseq reads (SRP049776)
ENST00000670789.1	Assembled from SLRseq reads (SRP049776)
ENST00000274311.3	MANE_select
ENST00000282588.7	MANE_select
ENST00000650673.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000514262.5	QC splicing correct
ENST00000513737.5	QC splicing correct
ENST00000652796.1	Assembled from SLRseq reads (SRP049776)
ENST00000662246.1	Assembled from SLRseq reads (SRP049776)
ENST00000503810.6	QC splicing correct
ENST00000296585.10	MANE_select
ENST00000652284.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000396954.8	MANE_select
ENST00000450852.8	NMD exception
ENST00000361377.8	NMD exception
ENST00000361377.8	alternative 3' UTR
ENST00000510818.6	NMD exception
ENST00000510818.6	QC splicing correct
ENST00000510818.6	alternative 3' UTR
ENST00000508922.5	NMD exception
ENST00000508922.5	QC splicing correct
ENST00000508922.5	alternative 3' UTR
ENST00000582677.5	NMD exception
ENST00000582677.5	alternative 3' UTR
ENST00000584946.5	NMD exception
ENST00000584946.5	alternative 3' UTR
ENST00000527216.5	NMD exception
ENST00000527216.5	alternative 5' UTR
ENST00000655901.1	Assembled from SLRseq reads (SRP049776)
ENST00000671496.1	Assembled from SLRseq reads (SRP049776)
ENST00000658778.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656188.1	Assembled from SLRseq reads (SRP049776)
ENST00000660072.1	Assembled from SLRseq reads (SRP049776)
ENST00000667672.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000670486.1	Assembled from SLRseq reads (SRP049776)
ENST00000256759.8	MANE_select
ENST00000296684.10	MANE_select
ENST00000673597.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000673580.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000673580.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000672395.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000504552.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671867.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000511953.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000672960.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000504924.6	MANE_select
ENST00000663609.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000665899.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653566.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655801.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654906.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667636.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665869.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664079.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662351.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659703.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667992.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000523194.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000523194.7	QC splicing correct
ENST00000665795.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662022.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657771.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000512618.5	GENCODE experimental pipeline
ENST00000670528.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658828.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658828.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657274.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000504609.3	GENCODE experimental pipeline
ENST00000504609.3	QC splicing correct
ENST00000302005.3	MANE_select
ENST00000381410.5	MANE_select
ENST00000624221.1	confirm experimentally
ENST00000662448.1	Assembled from SLRseq reads (SRP049776)
ENST00000381405.5	MANE_select
ENST00000371487.7	GENCODE experimental pipeline
ENST00000609792.1	nested 454 RNA-Seq supported
ENST00000231009.3	MANE_select
ENST00000274306.7	MANE_select
ENST00000381375.7	MANE_select
ENST00000296733.5	FLJ37927
ENST00000515370.1	GENCODE experimental pipeline
ENST00000503787.6	MANE_select
ENST00000513312.3	MANE_select
ENST00000513468.5	QC splicing correct
ENST00000282572.5	MANE_select
ENST00000251636.10	MANE_select
ENST00000230640.10	MANE_select
ENST00000307259.9	MANE_select
ENST00000396865.7	MANE_select
ENST00000396865.7	alternative 5' UTR
ENST00000512595.5	GENCODE experimental pipeline
ENST00000511233.5	QC splicing correct
ENST00000503817.5	GENCODE experimental pipeline
ENST00000503891.5	alternative 5' UTR
ENST00000513993.5	alternative 5' UTR
ENST00000506624.5	alternative 5' UTR
ENST00000507109.5	alternative 5' UTR
ENST00000513275.5	alternative 5' UTR
ENST00000505374.6	MANE_select
ENST00000503129.5	QC splicing correct
ENST00000652347.1	CAGE supported TSS
ENST00000652347.1	LR annotation
ENST00000652039.1	CAGE supported TSS
ENST00000490985.5	CAGE supported TSS
ENST00000381298.7	MANE_select
ENST00000651614.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000502326.7	QC splicing correct
ENST00000502326.7	alternative 5' UTR
ENST00000381294.7	NP_001177910.1
ENST00000381293.6	GENCODE experimental pipeline
ENST00000522633.2	NMD exception
ENST00000423954.3	NMD likely if extended
ENST00000577363.1	NMD likely if extended
ENST00000341048.9	MANE_select
ENST00000504958.6	QC splicing correct
ENST00000504349.1	GENCODE experimental pipeline
ENST00000665339.1	Assembled from SLRseq reads (SRP049776)
ENST00000511661.3	Assembled from SLRseq reads (SRP049776)
ENST00000653172.1	Assembled from SLRseq reads (SRP049776)
ENST00000652205.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000431789.1	GENCODE experimental pipeline
ENST00000438117.2	GENCODE experimental pipeline
ENST00000399503.4	MANE_select
ENST00000285947.5	MANE_select
ENST00000480414.1	QC splicing correct
ENST00000423328.1	GENCODE experimental pipeline
ENST00000381199.8	MANE_select
ENST00000409421.5	GENCODE experimental pipeline
ENST00000336942.9	QC splicing correct
ENST00000546593.5	QC splicing correct
ENST00000440000.5	QC splicing correct
ENST00000497185.2	QC splicing correct
ENST00000506184.7	MANE_select
ENST00000664944.1	Assembled from SLRseq reads (SRP049776)
ENST00000423391.3	MANE_select
ENST00000513392.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667799.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663255.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670275.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670663.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660175.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654759.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658534.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000509844.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670346.1	Assembled from SLRseq reads (SRP049776)
ENST00000671639.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668787.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661344.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661072.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659991.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000505861.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000505861.3	QC splicing correct
ENST00000660090.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661833.1	Assembled from SLRseq reads (SRP049776)
ENST00000274289.8	MANE_select
ENST00000502276.5	alternative 5' UTR
ENST00000396776.6	FLJ33641
ENST00000511930.1	alternative 5' UTR
ENST00000504333.1	GENCODE experimental pipeline
ENST00000282878.6	MANE_select
ENST00000340635.11	MANE_select
ENST00000505453.1	QC splicing correct
ENST00000505453.1	alternative 5' UTR
ENST00000505507.6	alternative 5' UTR
ENST00000514552.5	alternative 5' UTR
ENST00000661844.1	Assembled from SLRseq reads (SRP049776)
ENST00000667192.1	Assembled from SLRseq reads (SRP049776)
ENST00000663388.1	Assembled from SLRseq reads (SRP049776)
ENST00000506884.2	Assembled from SLRseq reads (SRP049776)
ENST00000664492.1	Assembled from SLRseq reads (SRP049776)
ENST00000265036.10	MANE_select
ENST00000453022.6	NP_001138680.1
ENST00000664253.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000508821.6	MANE_select
ENST00000505959.5	GENCODE experimental pipeline
ENST00000511799.5	alternative 5' UTR
ENST00000507047.5	alternative 5' UTR
ENST00000676185.1	MANE_select
ENST00000296597.10	MANE_select
ENST00000339020.8	MANE_select
ENST00000339020.8	alternative 5' UTR
ENST00000511794.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661728.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000503882.1	GENCODE experimental pipeline
ENST00000659829.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000252744.6	MANE_select
ENST00000252744.6	QC splicing correct
ENST00000252744.6	confirm experimentally
ENST00000671203.1	Assembled from SLRseq reads (SRP049776)
ENST00000666506.1	Assembled from SLRseq reads (SRP049776)
ENST00000663605.1	Assembled from SLRseq reads (SRP049776)
ENST00000666004.1	Assembled from SLRseq reads (SRP049776)
ENST00000654772.1	Assembled from SLRseq reads (SRP049776)
ENST00000659478.1	Assembled from SLRseq reads (SRP049776)
ENST00000665180.1	Assembled from SLRseq reads (SRP049776)
ENST00000657803.1	Assembled from SLRseq reads (SRP049776)
ENST00000659260.1	Assembled from SLRseq reads (SRP049776)
ENST00000669536.1	Assembled from SLRseq reads (SRP049776)
ENST00000507461.2	Assembled from SLRseq reads (SRP049776)
ENST00000668566.1	Assembled from SLRseq reads (SRP049776)
ENST00000667197.1	Assembled from SLRseq reads (SRP049776)
ENST00000668061.1	Assembled from SLRseq reads (SRP049776)
ENST00000666908.1	Assembled from SLRseq reads (SRP049776)
ENST00000505642.6	Assembled from SLRseq reads (SRP049776)
ENST00000658416.1	Assembled from SLRseq reads (SRP049776)
ENST00000671321.1	Assembled from SLRseq reads (SRP049776)
ENST00000658355.1	Assembled from SLRseq reads (SRP049776)
ENST00000668865.1	Assembled from SLRseq reads (SRP049776)
ENST00000668597.1	Assembled from SLRseq reads (SRP049776)
ENST00000510414.3	Assembled from SLRseq reads (SRP049776)
ENST00000665322.1	Assembled from SLRseq reads (SRP049776)
ENST00000656556.1	Assembled from SLRseq reads (SRP049776)
ENST00000655479.1	Assembled from SLRseq reads (SRP049776)
ENST00000669357.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000511474.1	GENCODE experimental pipeline
ENST00000660195.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000675085.1	align_id:3708266|asmbl_198431
ENST00000514082.6	align_id:1357226|asmbl_77129
ENST00000514082.6	pacbio_cs_merged_multi
ENST00000407818.8	MANE_select
ENST00000674632.1	align_id:3708266|asmbl_198431
ENST00000674916.1	align_id:3708279|asmbl_198444
ENST00000676413.1	align_id:3708273|asmbl_198438
ENST00000676122.1	align_id:3708278|asmbl_198443
ENST00000674751.1	align_id:3708274|asmbl_198439
ENST00000381103.7	GENCODE experimental pipeline
ENST00000381103.7	upstream ATG
ENST00000676271.1	align_id:3708271|asmbl_198436
ENST00000674733.1	align_id:3708265|asmbl_198430
ENST00000512006.2	GENCODE experimental pipeline
ENST00000512006.2	QC splicing correct
ENST00000675534.1	align_id:3708281|asmbl_198446
ENST00000675387.1	align_id:3708280|asmbl_198445
ENST00000651114.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000199320.9	MANE_select
ENST00000514647.5	alternative 5' UTR
ENST00000424533.5	non canonical U12
ENST00000505902.5	alternative 5' UTR
ENST00000325324.11	FLJ10834
ENST00000325324.11	MANE_select
ENST00000506200.5	alternative 5' UTR
ENST00000409296.7	CCDS47217.1
ENST00000409296.7	FLJ59791
ENST00000409296.7	NP_001128251.1
ENST00000413749.2	QC splicing correct
ENST00000409534.1	CAGE supported TSS
ENST00000409534.1	DKFZp686E10165
ENST00000409534.1	GENCODE experimental pipeline
ENST00000334994.6	CCDS47218.1
ENST00000334994.6	MANE_select
ENST00000448151.2	CAGE supported TSS
ENST00000491184.2	CAGE supported TSS
ENST00000491184.2	GENCODE experimental pipeline
ENST00000663610.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000323865.5	MANE_select
ENST00000506598.1	alternative 5' UTR
ENST00000389100.9	MANE_select
ENST00000504296.1	alternative 5' UTR
ENST00000334025.3	MANE_select
ENST00000505263.1	QC splicing correct
ENST00000389074.6	MANE_select
ENST00000513458.9	MANE_select
ENST00000513458.9	NP_776190.1
ENST00000651194.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000381070.8	MANE_select
ENST00000508024.1	GENCODE experimental pipeline
ENST00000381055.8	MANE_select
ENST00000514814.5	alternative 5' UTR
ENST00000396679.6	MANE_select
ENST00000506282.6	QC splicing correct
ENST00000502997.5	alternative 5' UTR
ENST00000508311.1	5' 69 bp of evidence does not align to this or any region of the human reference genome
ENST00000261308.10	MANE_select
ENST00000231524.14	MANE_select
ENST00000506400.1	GENCODE experimental pipeline
ENST00000513794.1	alternative 5' UTR
ENST00000399438.8	MANE_select
ENST00000510585.3	MANE_select
ENST00000514404.1	not organism-supported
ENST00000381007.9	MANE_select
ENST00000506816.1	alternative 5' UTR
ENST00000380985.10	MANE_select
ENST00000511299.5	GENCODE experimental pipeline
ENST00000509935.2	QC splicing correct
ENST00000515595.1	GENCODE experimental pipeline
ENST00000284037.10	MANE_select
ENST00000663947.1	Assembled from RACEseq reads
ENST00000651719.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000521691.5	alternative 5' UTR
ENST00000334121.11	MANE_select
ENST00000509924.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669604.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654396.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665668.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668202.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668388.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000510964.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661731.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661969.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661586.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663200.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666197.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665775.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652255.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000508486.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000508486.3	GENCODE experimental pipeline
ENST00000403625.6	QC splicing correct
ENST00000436277.5	alternative 5' UTR
ENST00000451496.1	GENCODE experimental pipeline
ENST00000256447.5	MANE_select
ENST00000515077.1	GENCODE experimental pipeline
ENST00000653057.1	Assembled from SLRseq reads (SRP049776)
ENST00000668508.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000659965.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669754.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660658.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660629.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670004.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000515227.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660391.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000504068.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670173.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667775.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653448.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669367.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669333.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657280.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657465.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000507298.1	GENCODE experimental pipeline
ENST00000507298.1	QC splicing correct
ENST00000521381.6	MANE_select
ENST00000521657.5	alternative 5' UTR
ENST00000520675.1	not organism-supported
ENST00000523807.5	alternative 5' UTR
ENST00000668654.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663729.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000515199.1	GENCODE experimental pipeline
ENST00000668535.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000503268.2	Assembled from SLRseq reads (SRP049776)
ENST00000654078.1	Assembled from SLRseq reads (SRP049776)
ENST00000513197.1	GENCODE experimental pipeline
ENST00000396591.8	MANE_select
ENST00000511158.1	GENCODE experimental pipeline
ENST00000256442.10	MANE_select
ENST00000508407.5	GENCODE experimental pipeline
ENST00000283006.7	MANE_select
ENST00000256441.5	MANE_select
ENST00000512880.5	QC splicing correct
ENST00000602380.1	QC splicing correct
ENST00000256443.8	MANE_select
ENST00000514676.5	QC splicing correct
ENST00000508726.5	QC splicing correct
ENST00000396496.7	MANE_select
ENST00000383374.6	QC splicing correct
ENST00000380822.9	MANE_select
ENST00000502819.5	QC splicing correct
ENST00000512561.5	QC splicing correct
ENST00000506736.1	alternative 5' UTR
ENST00000217893.10	MANE_select
ENST00000503245.5	alternative 5' UTR
ENST00000504109.5	alternative 5' UTR
ENST00000361732.6	alternative 5' UTR
ENST00000507927.5	alternative 5' UTR
ENST00000354868.10	MANE_select
ENST00000354868.10	alternative 5' UTR
ENST00000521422.5	NP_579918
ENST00000354312.7	alternative 5' UTR
ENST00000345306.10	alternative 5' UTR
ENST00000506564.5	alternative 5' UTR
ENST00000305138.8	alternative 5' UTR
ENST00000513214.1	GENCODE experimental pipeline
ENST00000647531.1	alternative 5' UTR
ENST00000645446.1	alternative 5' UTR
ENST00000325631.10	LR annotation
ENST00000325631.10	MANE_select
ENST00000515844.1	alternative 5' UTR
ENST00000512803.5	alternative 5' UTR
ENST00000413223.3	GENCODE experimental pipeline
ENST00000355237.6	alternative 5' UTR
ENST00000681041.1	alternative 5' UTR
ENST00000396442.7	MANE_select
ENST00000396442.7	alternative 5' UTR
ENST00000681586.1	CAGE supported TSS
ENST00000681586.1	alternative 5' UTR
ENST00000680027.1	CAGE supported TSS
ENST00000680027.1	alternative 5' UTR
ENST00000680496.1	CAGE supported TSS
ENST00000680496.1	alternative 5' UTR
ENST00000538151.2	overlapping uORF
ENST00000380729.8	MANE_select
ENST00000380729.8	alternative 5' UTR
ENST00000511629.6	QC splicing correct
ENST00000510979.5	alternative 5' UTR
ENST00000505737.2	QC splicing correct
ENST00000513959.2	QC splicing correct
ENST00000380750.8	MANE_select
ENST00000506734.5	Genoscope mRNA only
ENST00000506734.5	QC splicing correct
ENST00000380743.9	MANE_select
ENST00000511162.1	alternative 5' UTR
ENST00000317633.14	MANE_select
ENST00000512868.6	alternative 5' UTR
ENST00000380707.9	MANE_select
ENST00000517649.6	MANE_select
ENST00000523981.5	NP_075043.1
ENST00000330280.11	alternative 5' UTR
ENST00000518898.6	QC splicing correct
ENST00000521602.2	QC splicing correct
ENST00000671145.1	Assembled from SLRseq reads (SRP049776)
ENST00000358731.9	MANE_select
ENST00000508157.3	GENCODE experimental pipeline
ENST00000512218.6	GENCODE experimental pipeline
ENST00000340941.11	MANE_select
ENST00000505435.3	GENCODE experimental pipeline
ENST00000296777.5	MANE_select
ENST00000660186.1	Assembled from RACEseq reads
ENST00000296755.12	MANE_select
ENST00000504492.1	GENCODE experimental pipeline
ENST00000261413.10	MANE_select
ENST00000380639.10	MANE_select
ENST00000318442.6	MANE_select
ENST00000662691.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663630.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659888.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000518279.5	non canonical conserved
ENST00000506351.6	NP_694858.1
ENST00000430046.7	MANE_select
ENST00000507345.6	QC splicing correct
ENST00000454765.7	MANE_select
ENST00000296776.6	MANE_select
ENST00000296776.6	MGC13034
ENST00000664281.1	Assembled from SLRseq reads (SRP049776)
ENST00000654696.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667953.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661414.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663515.1	Assembled from SLRseq reads (SRP049776)
ENST00000615637.3	MANE_select
ENST00000615637.3	NP_004463.1
ENST00000678135.1	QC splicing correct
ENST00000507081.6	QC splicing correct
ENST00000509708.2	GENCODE experimental pipeline
ENST00000509708.2	QC splicing correct
ENST00000296785.8	MANE_select
ENST00000504641.1	GENCODE experimental pipeline
ENST00000513824.5	alternative 5' UTR
ENST00000509005.5	GENCODE experimental pipeline
ENST00000296792.9	MANE_select
ENST00000508686.1	alternative 5' UTR
ENST00000509848.5	alternative 5' UTR
ENST00000506717.1	GENCODE experimental pipeline
ENST00000663633.1	Assembled from SLRseq reads (SRP049776)
ENST00000507781.1	LINC01157
ENST00000657957.1	Assembled from SLRseq reads (SRP049776)
ENST00000651573.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000507890.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000507890.2	GENCODE experimental pipeline
ENST00000512458.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669685.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669685.1	GENCODE experimental pipeline
ENST00000665644.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659684.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655255.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657940.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651656.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000662472.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657950.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671086.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659118.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654284.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000508083.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667290.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654749.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667820.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000506612.1	GENCODE experimental pipeline
ENST00000302351.9	MANE_select
ENST00000510316.5	GENCODE experimental pipeline
ENST00000651128.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000509284.1	GENCODE experimental pipeline
ENST00000508331.1	alternative 5' UTR
ENST00000509127.2	QC splicing correct
ENST00000509127.2	alternative 5' UTR
ENST00000261416.12	MANE_select
ENST00000296805.8	MANE_select
ENST00000506778.1	GENCODE experimental pipeline
ENST00000610426.5	MANE_select
ENST00000514215.5	alternative 5' UTR
ENST00000510496.5	GENCODE experimental pipeline
ENST00000510609.5	alternative 5' UTR
ENST00000513277.5	alternative 5' UTR
ENST00000514200.5	alternative 5' UTR
ENST00000506954.1	alternative 5' UTR
ENST00000657368.1	Assembled from SLRseq reads (SRP049776)
ENST00000652361.2	MANE_select
ENST00000504022.1	not organism-supported
ENST00000506364.6	CAGE supported TSS
ENST00000506364.6	MANE_select
ENST00000501886.2	GENCODE experimental pipeline
ENST00000511206.5	alternative 5' UTR
ENST00000287936.9	MANE_select
ENST00000681410.1	alternative 5' UTR
ENST00000442032.2	alternative 5' UTR
ENST00000509085.5	GENCODE experimental pipeline
ENST00000511986.1	GENCODE experimental pipeline
ENST00000644445.1	alternative 3' UTR
ENST00000644072.2	CAGE supported TSS
ENST00000644072.2	LR annotation
ENST00000261415.12	alternative 3' UTR
ENST00000642809.1	alternative 3' UTR
ENST00000642225.1	alternative 3' UTR
ENST00000405807.10	NP_001123577.1
ENST00000643780.2	MANE_select
ENST00000643780.2	alternative 3' UTR
ENST00000643158.1	alternative 3' UTR
ENST00000646511.1	alternative 3' UTR
ENST00000506928.5	confirm experimentally
ENST00000506928.5	non canonical TEC
ENST00000514296.5	alternative 5' UTR
ENST00000601380.4	MANE_select
ENST00000601380.4	QC splicing correct
ENST00000601380.4	confirm experimentally
ENST00000672135.1	alternative 3' UTR
ENST00000673225.1	alternative 3' UTR
ENST00000428202.7	MANE_select
ENST00000514838.6	GENCODE experimental pipeline
ENST00000514838.6	QC splicing correct
ENST00000503835.5	alternative 5' UTR
ENST00000502826.5	alternative 5' UTR
ENST00000506164.5	alternative 5' UTR
ENST00000503652.1	GENCODE experimental pipeline
ENST00000502798.7	MANE_select
ENST00000502589.1	QC splicing correct
ENST00000274364.11	MANE_select
ENST00000514579.1	GENCODE experimental pipeline
ENST00000296641.5	MANE_select
ENST00000504899.1	GENCODE experimental pipeline
ENST00000319211.5	MANE_select
ENST00000296677.5	MANE_select
ENST00000317593.9	MANE_select
ENST00000317593.9	alternative 3' UTR
ENST00000317593.9	alternative 5' UTR
ENST00000274368.9	MANE_select
ENST00000312916.12	MANE_select
ENST00000255198.3	MANE_select
ENST00000511587.1	alternative 5' UTR
ENST00000508401.1	GENCODE experimental pipeline
ENST00000264917.10	MANE_select
ENST00000502945.1	alternative 5' UTR
ENST00000296679.9	MANE_select
ENST00000515253.5	GENCODE experimental pipeline
ENST00000306422.5	MANE_select
ENST00000380377.9	MANE_select
ENST00000651106.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000523413.2	QC splicing correct
ENST00000658162.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000255194.11	MANE_select
ENST00000665502.1	Assembled from SLRseq reads (SRP049776)
ENST00000618166.4	NP_001277158.1
ENST00000621999.5	MANE_select
ENST00000515007.6	alternative 5' UTR
ENST00000380345.7	MANE_select
ENST00000380345.7	genebuild_only_MANE
ENST00000264914.10	LR annotation
ENST00000264914.10	MANE_select
ENST00000521117.1	alternative 5' UTR
ENST00000255189.8	MANE_select
ENST00000523201.1	QC splicing correct
ENST00000255192.8	MANE_select
ENST00000274353.10	MANE_select
ENST00000396137.5	MANE_select
ENST00000334082.11	MANE_select
ENST00000446378.3	MANE_select
ENST00000665156.1	Assembled from SLRseq reads (SRP049776)
ENST00000666192.1	Assembled from SLRseq reads (SRP049776)
ENST00000658809.1	Assembled from SLRseq reads (SRP049776)
ENST00000512528.3	MANE_select
ENST00000350881.6	MANE_select
ENST00000511733.1	GENCODE experimental pipeline
ENST00000661210.1	Assembled from SLRseq reads (SRP049776)
ENST00000665368.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000509193.5	NP_001167542.1
ENST00000507668.7	MANE_select
ENST00000507668.7	NP_001167543.1
ENST00000511881.1	alternative 5' UTR
ENST00000296739.6	MANE_select
ENST00000510158.5	alternative 5' UTR
ENST00000505560.5	MANE_select
ENST00000505560.5	alternative 5' UTR
ENST00000666568.1	Assembled from SLRseq reads (SRP049776)
ENST00000504300.2	Assembled from SLRseq reads (SRP049776)
ENST00000508000.6	Assembled from SLRseq reads (SRP049776)
ENST00000282226.5	MANE_select
ENST00000338682.8	MANE_select
ENST00000508916.1	alternative 5' UTR
ENST00000515871.1	GENCODE experimental pipeline
ENST00000439211.7	MANE_select
ENST00000505337.5	alternative 3' UTR
ENST00000604882.2	not best-in-genome evidence
ENST00000670357.1	non canonical U12
ENST00000265081.7	LR annotation
ENST00000265081.7	MANE_select
ENST00000265081.7	non canonical U12
ENST00000667069.1	non canonical U12
ENST00000512531.1	QC splicing correct
ENST00000658259.1	CAGE supported TSS
ENST00000658259.1	non canonical U12
ENST00000660640.1	Assembled from RACEseq reads
ENST00000667579.1	Assembled from SLRseq reads (SRP049776)
ENST00000265080.9	MANE_select
ENST00000663674.1	Assembled from SLRseq reads (SRP049776)
ENST00000660242.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670957.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669977.1	Assembled from SLRseq reads (SRP049776)
ENST00000656836.1	Assembled from SLRseq reads (SRP049776)
ENST00000665093.1	Assembled from SLRseq reads (SRP049776)
ENST00000663467.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000511719.5	alternative 5' UTR
ENST00000254035.9	MANE_select
ENST00000424301.6	alternative 5' UTR
ENST00000407610.8	MANE_select
ENST00000254037.6	alternative 5' UTR
ENST00000380199.9	alternative 5' UTR
ENST00000438268.2	alternative 5' UTR
ENST00000307624.8	MANE_select
ENST00000670393.1	Assembled from RACEseq reads
ENST00000512923.5	Genoscope mRNA only
ENST00000512923.5	QC splicing correct
ENST00000504174.5	QC splicing correct
ENST00000659627.1	Assembled from SLRseq reads (SRP049776)
ENST00000282185.8	MANE_select
ENST00000355178.8	alternative 5' UTR
ENST00000510085.1	alternative 5' UTR
ENST00000458350.7	alternative 5' UTR
ENST00000513443.5	GENCODE experimental pipeline
ENST00000296674.13	MANE_select
ENST00000651545.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000510019.5	GENCODE experimental pipeline
ENST00000654717.1	Assembled from SLRseq reads (SRP049776)
ENST00000627179.2	Assembled from SLRseq reads (SRP049776)
ENST00000504916.1	GENCODE experimental pipeline
ENST00000502346.2	MANE_select
ENST00000396027.9	CAGE supported TSS
ENST00000396027.9	MANE_select
ENST00000511817.1	alternative 5' UTR
ENST00000265077.8	MANE_select
ENST00000512090.1	GENCODE experimental pipeline
ENST00000274341.9	MANE_select
ENST00000503117.1	NAGNAG splice site
ENST00000515590.1	QC splicing correct
ENST00000296591.10	MANE_select
ENST00000296591.10	alternative 5' UTR
ENST00000661965.1	Assembled from SLRseq reads (SRP049776)
ENST00000653332.1	Assembled from SLRseq reads (SRP049776)
ENST00000670929.1	Assembled from SLRseq reads (SRP049776)
ENST00000661098.1	Assembled from SLRseq reads (SRP049776)
ENST00000502253.2	Assembled from SLRseq reads (SRP049776)
ENST00000654215.1	Assembled from SLRseq reads (SRP049776)
ENST00000666514.1	Assembled from SLRseq reads (SRP049776)
ENST00000247655.4	MANE_select
ENST00000509578.1	alternative 3' UTR
ENST00000670908.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000503843.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665185.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000274376.11	MANE_select
ENST00000504878.1	GENCODE experimental pipeline
ENST00000256897.9	MANE_select
ENST00000655396.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000504287.1	GENCODE experimental pipeline
ENST00000511417.2	Assembled from SLRseq reads (SRP049776)
ENST00000511417.2	GENCODE experimental pipeline
ENST00000662579.1	Assembled from SLRseq reads (SRP049776)
ENST00000667965.1	Assembled from SLRseq reads (SRP049776)
ENST00000668454.1	Assembled from SLRseq reads (SRP049776)
ENST00000655360.1	Assembled from SLRseq reads (SRP049776)
ENST00000659578.1	Assembled from SLRseq reads (SRP049776)
ENST00000296595.11	MANE_select
ENST00000296595.11	MGC33214
ENST00000512429.5	GENCODE experimental pipeline
ENST00000501869.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658478.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658478.1	Assembled from SLRseq reads (SRP049776)
ENST00000664347.1	Assembled from SLRseq reads (SRP049776)
ENST00000666577.1	Assembled from SLRseq reads (SRP049776)
ENST00000654762.1	Assembled from SLRseq reads (SRP049776)
ENST00000658094.1	Assembled from SLRseq reads (SRP049776)
ENST00000669353.1	Assembled from SLRseq reads (SRP049776)
ENST00000663476.1	Assembled from SLRseq reads (SRP049776)
ENST00000661627.1	Assembled from SLRseq reads (SRP049776)
ENST00000664546.1	Assembled from SLRseq reads (SRP049776)
ENST00000663490.1	Assembled from SLRseq reads (SRP049776)
ENST00000656903.1	Assembled from SLRseq reads (SRP049776)
ENST00000661377.1	Assembled from SLRseq reads (SRP049776)
ENST00000653918.1	Assembled from SLRseq reads (SRP049776)
ENST00000668471.1	Assembled from SLRseq reads (SRP049776)
ENST00000659093.1	Assembled from SLRseq reads (SRP049776)
ENST00000504636.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666808.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655966.1	Assembled from SLRseq reads (SRP049776)
ENST00000664462.1	Assembled from SLRseq reads (SRP049776)
ENST00000670030.1	Assembled from SLRseq reads (SRP049776)
ENST00000660783.1	Assembled from SLRseq reads (SRP049776)
ENST00000662970.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661351.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671394.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671394.1	Assembled from SLRseq reads (SRP049776)
ENST00000670451.1	Assembled from SLRseq reads (SRP049776)
ENST00000670873.1	Assembled from SLRseq reads (SRP049776)
ENST00000658611.1	Assembled from SLRseq reads (SRP049776)
ENST00000657972.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653898.1	Assembled from SLRseq reads (SRP049776)
ENST00000667139.1	Assembled from SLRseq reads (SRP049776)
ENST00000656152.1	Assembled from SLRseq reads (SRP049776)
ENST00000659938.1	Assembled from SLRseq reads (SRP049776)
ENST00000669465.1	Assembled from SLRseq reads (SRP049776)
ENST00000659215.1	Assembled from SLRseq reads (SRP049776)
ENST00000665926.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667511.1	Assembled from SLRseq reads (SRP049776)
ENST00000507736.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000496733.6	QC splicing correct
ENST00000513694.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000510087.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669796.1	Assembled from SLRseq reads (SRP049776)
ENST00000668037.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657617.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659005.1	Assembled from SLRseq reads (SRP049776)
ENST00000667127.1	Assembled from SLRseq reads (SRP049776)
ENST00000668128.1	Assembled from SLRseq reads (SRP049776)
ENST00000657491.1	Assembled from SLRseq reads (SRP049776)
ENST00000653183.1	Assembled from SLRseq reads (SRP049776)
ENST00000665319.1	Assembled from SLRseq reads (SRP049776)
ENST00000656195.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665517.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000504034.2	QC splicing correct
ENST00000662192.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669424.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669424.1	Assembled from SLRseq reads (SRP049776)
ENST00000670494.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670494.1	Assembled from SLRseq reads (SRP049776)
ENST00000664240.1	Assembled from SLRseq reads (SRP049776)
ENST00000662060.1	Assembled from SLRseq reads (SRP049776)
ENST00000665062.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665062.1	Assembled from SLRseq reads (SRP049776)
ENST00000665865.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665865.1	Assembled from SLRseq reads (SRP049776)
ENST00000668089.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668089.1	Assembled from SLRseq reads (SRP049776)
ENST00000656755.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666297.1	Assembled from SLRseq reads (SRP049776)
ENST00000513805.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000509405.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000508885.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659156.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000506664.6	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000663994.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000505030.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000511014.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666342.1	Assembled from SLRseq reads (SRP049776)
ENST00000509265.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000509265.2	Assembled from SLRseq reads (SRP049776)
ENST00000663276.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663276.1	Assembled from SLRseq reads (SRP049776)
ENST00000666195.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666195.1	Assembled from SLRseq reads (SRP049776)
ENST00000658935.1	Assembled from SLRseq reads (SRP049776)
ENST00000661688.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661688.1	Assembled from SLRseq reads (SRP049776)
ENST00000509783.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000515885.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662146.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000513026.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671230.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655936.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652822.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657578.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659116.1	Assembled from SLRseq reads (SRP049776)
ENST00000661038.1	Assembled from SLRseq reads (SRP049776)
ENST00000663453.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663453.1	Assembled from SLRseq reads (SRP049776)
ENST00000653354.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659756.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666338.1	Assembled from SLRseq reads (SRP049776)
ENST00000504921.7	MANE_select
ENST00000424173.6	NP_001124477.1
ENST00000637481.1	NAGNAG splice site
ENST00000636998.1	NAGNAG splice site
ENST00000636998.1	alternative 5' UTR
ENST00000625674.2	NAGNAG splice site
ENST00000625674.2	alternative 5' UTR
ENST00000437473.6	NAGNAG splice site
ENST00000437473.6	alternative 5' UTR
ENST00000514028.5	alternative 5' UTR
ENST00000510942.5	NAGNAG splice site
ENST00000506554.5	GENCODE experimental pipeline
ENST00000506554.5	QC splicing correct
ENST00000637732.1	NAGNAG splice site
ENST00000637732.1	alternative 5' UTR
ENST00000629612.2	NAGNAG splice site
ENST00000636294.1	NAGNAG splice site
ENST00000636294.1	alternative 5' UTR
ENST00000627659.2	NAGNAG splice site
ENST00000508569.5	alternative 5' UTR
ENST00000503554.4	CAGE supported TSS
ENST00000626391.2	NP_001180278.1
ENST00000513252.5	alternative 5' UTR
ENST00000506716.5	alternative 5' UTR
ENST00000631026.2	alternative 5' UTR
ENST00000502831.5	NAGNAG splice site
ENST00000502831.5	alternative 5' UTR
ENST00000507984.5	NAGNAG splice site
ENST00000507984.5	alternative 5' UTR
ENST00000502983.5	alternative 5' UTR
ENST00000508610.5	NAGNAG splice site
ENST00000508610.5	alternative 5' UTR
ENST00000636541.1	NAGNAG splice site
ENST00000636541.1	alternative 5' UTR
ENST00000503075.1	NAGNAG splice site
ENST00000503075.1	alternative 5' UTR
ENST00000511086.1	NAGNAG splice site
ENST00000509373.1	alternative 5' UTR
ENST00000515093.1	NAGNAG splice site
ENST00000509349.1	NAGNAG splice site
ENST00000509349.1	QC splicing correct
ENST00000512585.5	QC splicing correct
ENST00000505109.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658838.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652458.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000668800.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666691.1	Assembled from SLRseq reads (SRP049776)
ENST00000670522.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658685.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000524094.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667644.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664570.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660853.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669667.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000283122.8	MANE_select
ENST00000624106.1	confirm experimentally
ENST00000546238.2	confirm experimentally
ENST00000316610.7	LOC153364
ENST00000316610.7	MANE_select
ENST00000505345.5	GENCODE experimental pipeline
ENST00000651687.1	MANE_select
ENST00000651687.1	genebuild_only_MANE
ENST00000500869.6	GENCODE experimental pipeline
ENST00000315948.11	MANE_select
ENST00000405460.9	CAGE supported TSS
ENST00000405460.9	LR annotation
ENST00000405460.9	MANE_select
ENST00000640403.1	CAGE supported TSS
ENST00000640779.1	NAGNAG splice site
ENST00000638585.1	NMD likely if extended
ENST00000640815.1	CAGE supported TSS
ENST00000639821.1	CAGE supported TSS
ENST00000639707.1	CAGE supported TSS
ENST00000639707.1	alternative 5' UTR
ENST00000639707.1	upstream ATG
ENST00000640369.1	CAGE supported TSS
ENST00000640369.1	alternative 5' UTR
ENST00000664701.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649392.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648137.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653155.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668775.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660484.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654784.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649447.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000670581.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000513626.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660900.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000265138.4	MANE_select
ENST00000656345.1	Assembled from SLRseq reads (SRP049776)
ENST00000661720.1	Assembled from SLRseq reads (SRP049776)
ENST00000664873.1	Assembled from SLRseq reads (SRP049776)
ENST00000664205.1	Assembled from SLRseq reads (SRP049776)
ENST00000651690.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000654730.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661841.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660177.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671434.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000511323.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651096.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000657025.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671235.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000512210.5	non canonical TEC
ENST00000651927.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000663805.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653598.1	Assembled from SLRseq reads (SRP049776)
ENST00000671683.1	Assembled from SLRseq reads (SRP049776)
ENST00000664017.1	Assembled from SLRseq reads (SRP049776)
ENST00000654055.1	Assembled from SLRseq reads (SRP049776)
ENST00000666791.1	Assembled from SLRseq reads (SRP049776)
ENST00000656231.1	Assembled from SLRseq reads (SRP049776)
ENST00000656921.1	Assembled from SLRseq reads (SRP049776)
ENST00000671432.1	Assembled from SLRseq reads (SRP049776)
ENST00000671514.1	Assembled from SLRseq reads (SRP049776)
ENST00000665798.1	Assembled from SLRseq reads (SRP049776)
ENST00000659336.1	Assembled from SLRseq reads (SRP049776)
ENST00000666033.1	Assembled from SLRseq reads (SRP049776)
ENST00000669221.1	Assembled from SLRseq reads (SRP049776)
ENST00000653419.1	Assembled from SLRseq reads (SRP049776)
ENST00000653133.1	Assembled from SLRseq reads (SRP049776)
ENST00000661661.1	Assembled from SLRseq reads (SRP049776)
ENST00000664135.1	Assembled from SLRseq reads (SRP049776)
ENST00000658662.1	Assembled from SLRseq reads (SRP049776)
ENST00000654431.1	Assembled from SLRseq reads (SRP049776)
ENST00000656155.1	Assembled from SLRseq reads (SRP049776)
ENST00000667752.1	Assembled from SLRseq reads (SRP049776)
ENST00000661345.1	Assembled from SLRseq reads (SRP049776)
ENST00000654617.1	Assembled from SLRseq reads (SRP049776)
ENST00000510254.6	Assembled from SLRseq reads (SRP049776)
ENST00000659381.1	Assembled from SLRseq reads (SRP049776)
ENST00000659983.1	Assembled from SLRseq reads (SRP049776)
ENST00000656079.1	Assembled from SLRseq reads (SRP049776)
ENST00000606233.6	Assembled from SLRseq reads (SRP049776)
ENST00000656357.1	Assembled from SLRseq reads (SRP049776)
ENST00000670457.1	Assembled from SLRseq reads (SRP049776)
ENST00000665095.1	Assembled from SLRseq reads (SRP049776)
ENST00000606188.2	Assembled from SLRseq reads (SRP049776)
ENST00000665725.1	Assembled from SLRseq reads (SRP049776)
ENST00000654862.1	Assembled from SLRseq reads (SRP049776)
ENST00000660272.1	Assembled from SLRseq reads (SRP049776)
ENST00000665047.1	Assembled from SLRseq reads (SRP049776)
ENST00000657648.1	Assembled from SLRseq reads (SRP049776)
ENST00000669203.1	Assembled from SLRseq reads (SRP049776)
ENST00000664241.1	Assembled from SLRseq reads (SRP049776)
ENST00000664359.1	Assembled from SLRseq reads (SRP049776)
ENST00000663076.1	Assembled from SLRseq reads (SRP049776)
ENST00000671166.1	Assembled from SLRseq reads (SRP049776)
ENST00000666995.1	Assembled from SLRseq reads (SRP049776)
ENST00000513055.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653284.1	Assembled from SLRseq reads (SRP049776)
ENST00000655454.1	Assembled from SLRseq reads (SRP049776)
ENST00000503134.6	Assembled from SLRseq reads (SRP049776)
ENST00000653510.1	Assembled from SLRseq reads (SRP049776)
ENST00000655613.1	Assembled from SLRseq reads (SRP049776)
ENST00000664168.1	Assembled from SLRseq reads (SRP049776)
ENST00000653643.1	Assembled from SLRseq reads (SRP049776)
ENST00000661182.1	Assembled from SLRseq reads (SRP049776)
ENST00000670690.1	Assembled from SLRseq reads (SRP049776)
ENST00000668988.1	Assembled from SLRseq reads (SRP049776)
ENST00000606696.6	Assembled from SLRseq reads (SRP049776)
ENST00000661573.1	Assembled from SLRseq reads (SRP049776)
ENST00000659013.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000327111.8	MANE_select
ENST00000506162.1	GENCODE experimental pipeline
ENST00000395965.8	DKFZp564D172
ENST00000395965.8	MANE_select
ENST00000656848.1	Assembled from SLRseq reads (SRP049776)
ENST00000656321.1	Assembled from SLRseq reads (SRP049776)
ENST00000606183.4	MANE_select
ENST00000671167.1	Assembled from SLRseq reads (SRP049776)
ENST00000505668.1	XR_040970.1
ENST00000657563.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000513200.7	MGC34713
ENST00000513200.7	QC splicing correct
ENST00000513200.7	non-canonical splice donor site between exons 8 and 9
ENST00000504117.1	non-canonical splice sites between exons 2 and 3
ENST00000514061.2	QC splicing correct
ENST00000265140.10	MANE_select
ENST00000504099.5	alternative 5' UTR
ENST00000514040.1	Genoscope mRNA only
ENST00000514040.1	QC splicing correct
ENST00000506568.8	QC splicing correct
ENST00000514780.5	GENCODE experimental pipeline
ENST00000283357.10	MANE_select
ENST00000283357.10	non-canonical splice donor site between exons 2 and 3
ENST00000507832.5	non-canonical splice donor site between exons 1 and 2
ENST00000513110.1	QC splicing correct
ENST00000649566.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000358746.7	MANE_select
ENST00000513823.5	alternative 5' UTR
ENST00000380009.9	MANE_select
ENST00000504763.1	GENCODE experimental pipeline
ENST00000380007.3	MANE_select
ENST00000511684.5	alternative 5' UTR
ENST00000380005.9	CCDS47248.1
ENST00000380005.9	MANE_select
ENST00000513950.2	GENCODE experimental pipeline
ENST00000513950.2	QC splicing correct
ENST00000274432.13	MANE_select
ENST00000512486.5	QC splicing correct
ENST00000513235.2	Assembled from SLRseq reads (SRP049776)
ENST00000379982.8	MANE_select
ENST00000502541.1	QC splicing correct
ENST00000508780.5	alternative 3' UTR
ENST00000507605.1	QC splicing correct
ENST00000237858.11	MANE_select
ENST00000379979.8	alternative 3' UTR
ENST00000505427.1	alternative 3' UTR
ENST00000512469.2	alternative 3' UTR
ENST00000656444.1	Assembled from SLRseq reads (SRP049776)
ENST00000357880.8	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000357880.8	alternative 5' UTR
ENST00000503091.1	GENCODE experimental pipeline
ENST00000237853.9	MANE_select
ENST00000311106.8	MANE_select
ENST00000509190.1	alternative 5' UTR
ENST00000338252.7	P20810-2.4
ENST00000508830.5	NP_001741.4
ENST00000395812.6	NP_001035905.1
ENST00000674702.1	NAGNAG splice site
ENST00000675179.1	MANE_select
ENST00000674984.1	NP_001035907.1
ENST00000309190.9	P20810-4.4
ENST00000510156.5	alternative 5' UTR
ENST00000508117.6	non canonical TEC
ENST00000508117.6	non-canonical splice sites between exons 5 and 6
ENST00000511782.5	alternative 5' UTR
ENST00000675033.1	alternative 5' UTR
ENST00000348386.7	P20810-3.4
ENST00000508579.5	GENCODE experimental pipeline
ENST00000503828.5	alternative 5' UTR
ENST00000515663.5	CAGE supported TSS
ENST00000675734.1	NAGNAG splice site
ENST00000502568.1	GENCODE experimental pipeline
ENST00000443439.7	MANE_select
ENST00000512852.1	GENCODE experimental pipeline
ENST00000507154.1	alternative 5' UTR
ENST00000512856.1	GENCODE experimental pipeline
ENST00000512856.1	Genoscope mRNA only
ENST00000512856.1	QC splicing correct
ENST00000667085.1	Assembled from SLRseq reads (SRP049776)
ENST00000665723.1	Assembled from SLRseq reads (SRP049776)
ENST00000660209.1	Assembled from SLRseq reads (SRP049776)
ENST00000656950.1	Assembled from SLRseq reads (SRP049776)
ENST00000659319.1	Assembled from SLRseq reads (SRP049776)
ENST00000655392.1	Assembled from SLRseq reads (SRP049776)
ENST00000660988.1	Assembled from SLRseq reads (SRP049776)
ENST00000663822.1	Assembled from SLRseq reads (SRP049776)
ENST00000665421.1	Assembled from SLRseq reads (SRP049776)
ENST00000669694.1	Assembled from SLRseq reads (SRP049776)
ENST00000510373.5	alternative 5' UTR
ENST00000437043.8	MANE_select
ENST00000508077.1	GENCODE experimental pipeline
ENST00000395784.1	GENCODE experimental pipeline
ENST00000231368.10	MANE_select
ENST00000504578.2	GENCODE experimental pipeline
ENST00000274382.9	MANE_select
ENST00000512378.1	not organism-supported
ENST00000283109.8	MANE_select
ENST00000511293.1	GENCODE experimental pipeline
ENST00000654632.1	Assembled from SLRseq reads (SRP049776)
ENST00000505796.1	GENCODE experimental pipeline
ENST00000657058.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668863.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668472.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656559.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663326.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659033.1	Assembled from SLRseq reads (SRP049776)
ENST00000669006.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666358.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000502324.2	Assembled from SLRseq reads (SRP049776)
ENST00000671389.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000505908.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000505908.2	QC splicing correct
ENST00000308234.11	NP_001012779.2
ENST00000507054.1	QC splicing correct
ENST00000513185.3	MANE_select
ENST00000498871.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668195.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657458.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652853.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000614616.5	MANE_select
ENST00000614616.5	NP_001261.2
ENST00000670964.1	Assembled from SLRseq reads (SRP049776)
ENST00000510302.1	GENCODE experimental pipeline
ENST00000653556.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669620.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653128.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655175.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667726.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669888.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658450.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659740.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670187.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657549.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660230.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000511468.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000511468.2	GENCODE experimental pipeline
ENST00000663954.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669567.1	Assembled from SLRseq reads (SRP049776)
ENST00000312637.5	MANE_select
ENST00000231461.10	MANE_select
ENST00000451528.2	NP_778222.1
ENST00000506058.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000310954.7	MANE_select
ENST00000506729.6	MANE_select
ENST00000511588.1	alternative 3' UTR
ENST00000379807.7	alternative 3' UTR
ENST00000660106.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662437.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658823.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669204.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670038.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654003.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000505654.1	alternative 5' UTR
ENST00000512073.1	alternative 5' UTR
ENST00000511839.5	alternative 5' UTR
ENST00000511477.5	alternative 5' UTR
ENST00000506006.1	alternative 5' UTR
ENST00000509832.5	alternative 5' UTR
ENST00000438793.7	NP_001170777.1
ENST00000304400.11	NP_000910.2
ENST00000504691.1	GENCODE experimental pipeline
ENST00000399004.7	MANE_select
ENST00000515845.5	alternative 5' UTR
ENST00000507921.5	GENCODE experimental pipeline
ENST00000358359.8	MANE_select
ENST00000319933.7	LOC90355
ENST00000319933.7	MANE_select
ENST00000515669.5	alternative 5' UTR
ENST00000510890.1	alternative 5' UTR
ENST00000230792.7	MANE_select
ENST00000637582.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670561.1	Assembled from SLRseq reads (SRP049776)
ENST00000665271.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662211.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000666455.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666145.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000671304.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000505824.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000505824.6	GENCODE experimental pipeline
ENST00000659174.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000506976.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656667.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658334.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000523434.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660068.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662678.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653846.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656243.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661290.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651720.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000669785.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659751.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669636.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000518276.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665963.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661979.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657922.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000333274.11	MANE_select
ENST00000509503.1	GENCODE experimental pipeline
ENST00000653896.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000542267.7	MANE_select
ENST00000662770.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000281092.9	MANE_select
ENST00000655943.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000654789.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000361189.7	MANE_select
ENST00000261483.5	MANE_select
ENST00000455884.7	MANE_select
ENST00000515363.2	not organism-supported
ENST00000511883.6	alternative 5' UTR
ENST00000515278.6	alternative 5' UTR
ENST00000503527.6	GENCODE experimental pipeline
ENST00000506890.1	GENCODE experimental pipeline
ENST00000513807.5	alternative 5' UTR
ENST00000355943.8	MANE_select
ENST00000504098.1	alternative 5' UTR
ENST00000509432.1	GENCODE experimental pipeline
ENST00000344895.4	MANE_select
ENST00000507269.3	not organism-supported
ENST00000513710.4	CAGE supported TSS
ENST00000508074.5	alternative 5' UTR
ENST00000512453.5	alternative 5' UTR
ENST00000282356.9	MANE_select
ENST00000296632.8	MANE_select
ENST00000512160.5	alternative 3' UTR
ENST00000505803.5	alternative 5' UTR
ENST00000666013.1	Assembled from SLRseq reads (SRP049776)
ENST00000654777.1	Assembled from SLRseq reads (SRP049776)
ENST00000514515.5	GENCODE experimental pipeline
ENST00000257435.12	MANE_select
ENST00000257435.12	alternative 5' UTR
ENST00000446294.6	alternative 5' UTR
ENST00000395634.7	NP_001135947.1
ENST00000450761.6	alternative 5' UTR
ENST00000419114.6	alternative 5' UTR
ENST00000509427.5	alternative 5' UTR
ENST00000453526.6	alternative 5' UTR
ENST00000455559.6	alternative 5' UTR
ENST00000508870.5	alternative 5' UTR
ENST00000513100.5	alternative 5' UTR
ENST00000508161.5	alternative 5' UTR
ENST00000507032.2	alternative 5' UTR
ENST00000261486.6	MANE_select
ENST00000261486.6	NP_071423.3
ENST00000663232.1	Assembled from SLRseq reads (SRP049776)
ENST00000413221.7	Assembled from SLRseq reads (SRP049776)
ENST00000514411.1	confirm experimentally
ENST00000663305.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653123.1	Assembled from SLRseq reads (SRP049776)
ENST00000513687.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667476.1	Assembled from SLRseq reads (SRP049776)
ENST00000509732.5	alternative 5' UTR
ENST00000257430.9	MANE_select
ENST00000508376.6	alternative 5' UTR
ENST00000512211.6	alternative 5' UTR
ENST00000505459.6	MANE_select
ENST00000282999.7	GENCODE experimental pipeline
ENST00000379638.9	MANE_select
ENST00000513585.6	GENCODE experimental pipeline
ENST00000389063.3	MANE_select
ENST00000512751.5	NMD likely if extended
ENST00000408903.7	MANE_select
ENST00000390666.4	MANE_select
ENST00000161863.9	MANE_select
ENST00000515883.5	GENCODE experimental pipeline
ENST00000660812.1	Assembled from SLRseq reads (SRP049776)
ENST00000512927.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000512097.9	downstream ATG
ENST00000673685.1	CAGE supported TSS
ENST00000673685.1	MANE_select
ENST00000503706.5	NP_740721.1
ENST00000514115.6	Assembled from SLRseq reads (SRP049776)
ENST00000513154.6	MANE_select
ENST00000510222.1	GENCODE experimental pipeline
ENST00000511701.1	GENCODE experimental pipeline
ENST00000511701.1	QC splicing correct
ENST00000419445.6	MANE_select
ENST00000379611.10	MANE_select
ENST00000274457.5	MANE_select
ENST00000427199.3	MANE_select
ENST00000513729.1	GENCODE experimental pipeline
ENST00000668244.1	Assembled from SLRseq reads (SRP049776)
ENST00000508517.2	Assembled from SLRseq reads (SRP049776)
ENST00000456936.4	MANE_select
ENST00000503010.1	GENCODE experimental pipeline
ENST00000512900.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848).ID: align_id:1358755|asmbl_78658
ENST00000512900.2	pacbio_capture_seq_hsUndeter : m150425_160559_42137_c100813572550000001823175210081501_s1_p0_157013_ccs ; pacbio_capture_seq_hsLiver : m150412_085953_42137_c100785502550000001823156308111540_s1_p0_8180_ccs, m150311_194828_42137_c100761072550000001823160007221535_s1_p0_102519_ccs, m150425_160559_42137_c100813572550000001823175210081501_s1_p0_133631_ccs, m150418_193825_42137_c100813522550000001823175210081555_s1_p0_25227_ccs, m150414_204510_42137_c100793412550000001823172010081555_s1_p0_32756_ccs, m150412_131857_42137_c100785502550000001823156308111541_s1_p0_130009_ccs, m150424_203641_42137_c100813372550000001823175210081565_s1_p0_82362_ccs, m150426_134437_42137_c100813572550000001823175210081506_s1_p0_139646_ccs, m150424_073901_42137_c100813372550000001823175210081562_s1_p0_32650_ccs ;
ENST00000653181.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666278.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000505098.1	not organism-supported
ENST00000250535.5	MANE_select
ENST00000509910.2	MANE_select
ENST00000316788.12	MANE_select
ENST00000506430.2	QC splicing correct
ENST00000666259.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000357872.9	FLJ90650
ENST00000357872.9	MANE_select
ENST00000274458.9	MANE_select
ENST00000515539.5	GENCODE experimental pipeline
ENST00000343348.11	MANE_select
ENST00000510263.5	alternative 5' UTR
ENST00000515009.5	alternative 5' UTR
ENST00000509665.1	alternative 5' UTR
ENST00000663913.1	Assembled from SLRseq reads (SRP049776)
ENST00000660260.1	Assembled from SLRseq reads (SRP049776)
ENST00000660166.1	Assembled from SLRseq reads (SRP049776)
ENST00000655160.1	Assembled from SLRseq reads (SRP049776)
ENST00000666584.1	Assembled from SLRseq reads (SRP049776)
ENST00000649105.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000661774.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000509367.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657852.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666478.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667067.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660173.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666092.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665746.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661749.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659881.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659234.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654806.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653787.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662796.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660915.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661194.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667817.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655008.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000515704.1	not organism-supported
ENST00000666304.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000510708.6	MANE_select
ENST00000515439.7	QC splicing correct
ENST00000506980.2	QC splicing correct
ENST00000504820.2	Assembled from SLRseq reads (SRP049776)
ENST00000503802.5	alternative 5' UTR
ENST00000274456.6	NP_001071122.1
ENST00000503646.1	alternative 5' UTR
ENST00000504771.3	MANE_select
ENST00000504771.3	bodymap data confirmed
ENST00000415806.2	QC splicing correct
ENST00000442060.7	QC splicing correct
ENST00000510025.7	CAGE supported TSS
ENST00000510025.7	LR annotation
ENST00000510025.7	MANE_select
ENST00000414835.7	CAGE supported TSS
ENST00000414835.7	LR annotation
ENST00000508788.5	NMD likely if extended
ENST00000509514.5	GENCODE experimental pipeline
ENST00000509951.5	Genoscope mRNA only
ENST00000661834.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000407149.7	MANE_select
ENST00000379551.2	NP_057728.1
ENST00000509923.1	alternative 5' UTR
ENST00000661647.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671264.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000597452.4	Assembled from SLRseq reads (SRP049776)
ENST00000433406.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658417.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000594690.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668258.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000623862.1	confirm experimentally
ENST00000321339.3	MANE_select
ENST00000339397.5	MANE_select
ENST00000231004.5	MANE_select
ENST00000667709.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000296600.5	MANE_select
ENST00000504912.1	alternative 5' UTR
ENST00000505843.1	alternative 5' UTR
ENST00000514925.1	upstream uORF
ENST00000509403.6	upstream ATG
ENST00000505209.1	GENCODE experimental pipeline
ENST00000514467.5	alternative 5' UTR
ENST00000506272.5	alternative 5' UTR
ENST00000508681.5	alternative 5' UTR
ENST00000514497.6	alternative 5' UTR
ENST00000261367.11	GENCODE experimental pipeline
ENST00000261368.13	MANE_select
ENST00000509652.1	alternative 5' UTR
ENST00000655818.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649085.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000514657.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659891.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656860.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669389.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000379516.7	MANE_select
ENST00000505934.5	GENCODE experimental pipeline
ENST00000514949.1	GENCODE experimental pipeline
ENST00000261369.9	MANE_select
ENST00000506996.5	alternative 3' UTR
ENST00000306442.5	MANE_select
ENST00000506859.1	GENCODE experimental pipeline
ENST00000407847.5	MANE_select
ENST00000676068.1	align_id:3712298|asmbl_202463
ENST00000306467.10	FLJ36090
ENST00000306467.10	MANE_select
ENST00000676384.1	align_id:3712302|asmbl_202467
ENST00000675564.1	align_id:3712301|asmbl_202466
ENST00000675283.1	align_id:3712288|asmbl_202453
ENST00000675003.1	align_id:3712296|asmbl_202461
ENST00000675852.1	align_id:3712290|asmbl_202455
ENST00000675442.1	align_id:3712295|asmbl_202460
ENST00000508442.7	align_id:3712283|asmbl_202448
ENST00000675686.1	GENCODE experimental pipeline
ENST00000675686.1	align_id:3712284|asmbl_202449
ENST00000674667.1	align_id:3712293|asmbl_202458
ENST00000674620.1	align_id:3712291|asmbl_202456
ENST00000675814.1	align_id:3712287|asmbl_202452
ENST00000675330.1	align_id:3712289|asmbl_202454
ENST00000675104.1	align_id:3712294|asmbl_202459
ENST00000328236.10	alternative 5' UTR
ENST00000306481.11	GENCODE experimental pipeline
ENST00000306481.11	align_id:3712285|asmbl_202450
ENST00000674684.1	align_id:3712297|asmbl_202462
ENST00000675444.1	align_id:3712299|asmbl_202464
ENST00000503049.2	align_id:3712300|asmbl_202465
ENST00000675409.1	align_id:3712303|asmbl_202468
ENST00000623961.1	confirm experimentally
ENST00000521364.5	NP_001026982.1
ENST00000662643.1	Assembled from SLRseq reads (SRP049776)
ENST00000657766.1	Assembled from SLRseq reads (SRP049776)
ENST00000653233.1	Assembled from SLRseq reads (SRP049776)
ENST00000656386.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000502809.1	GENCODE experimental pipeline
ENST00000503145.1	GENCODE experimental pipeline
ENST00000509799.5	GENCODE experimental pipeline
ENST00000509799.5	alternative 5' UTR
ENST00000513986.1	GENCODE experimental pipeline
ENST00000513986.1	alternative 5' UTR
ENST00000653110.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671535.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655934.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656272.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655986.1	Assembled from SLRseq reads (SRP049776)
ENST00000651847.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000667560.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000285689.8	MANE_select
ENST00000648070.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000624769.1	confirm experimentally
ENST00000409134.8	MANE_select
ENST00000409134.8	NP_001173.2
ENST00000458249.6	alternative 3' UTR
ENST00000638008.1	alternative 3' UTR
ENST00000636225.1	alternative 3' UTR
ENST00000509459.6	alternative 3' UTR
ENST00000297540.5	MANE_select
ENST00000357147.4	FLJ27505
ENST00000357147.4	MANE_select
ENST00000509185.2	GENCODE experimental pipeline
ENST00000261366.10	MANE_select
ENST00000308660.6	MANE_select
ENST00000624912.1	confirm experimentally
ENST00000656996.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000656856.1	Assembled from SLRseq reads (SRP049776)
ENST00000659841.1	Assembled from SLRseq reads (SRP049776)
ENST00000660668.1	Assembled from SLRseq reads (SRP049776)
ENST00000670868.1	Assembled from SLRseq reads (SRP049776)
ENST00000654401.1	Assembled from SLRseq reads (SRP049776)
ENST00000652915.1	Assembled from SLRseq reads (SRP049776)
ENST00000653631.1	Assembled from SLRseq reads (SRP049776)
ENST00000503335.7	MANE_select
ENST00000503335.7	alternative 5' UTR
ENST00000508365.5	alternative 5' UTR
ENST00000515002.1	GENCODE experimental pipeline
ENST00000296666.13	MANE_select
ENST00000512635.2	QC splicing correct
ENST00000395322.3	alternative 5' UTR
ENST00000512352.1	QC splicing correct
ENST00000514853.4	QC splicing correct
ENST00000514853.4	upstream ATG
ENST00000507509.1	GENCODE experimental pipeline
ENST00000499346.7	Assembled from SLRseq reads (SRP049776)
ENST00000514409.6	Assembled from SLRseq reads (SRP049776)
ENST00000661296.1	Assembled from SLRseq reads (SRP049776)
ENST00000657475.1	Assembled from SLRseq reads (SRP049776)
ENST00000660408.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000660180.1	Assembled from SLRseq reads (SRP049776)
ENST00000665302.1	Assembled from SLRseq reads (SRP049776)
ENST00000661552.1	Assembled from SLRseq reads (SRP049776)
ENST00000659990.1	Assembled from SLRseq reads (SRP049776)
ENST00000665599.1	Assembled from SLRseq reads (SRP049776)
ENST00000501702.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000501702.7	Assembled from SLRseq reads (SRP049776)
ENST00000659415.1	Assembled from SLRseq reads (SRP049776)
ENST00000668265.1	Assembled from SLRseq reads (SRP049776)
ENST00000657683.1	Assembled from SLRseq reads (SRP049776)
ENST00000668567.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668567.1	Assembled from SLRseq reads (SRP049776)
ENST00000656154.1	Assembled from SLRseq reads (SRP049776)
ENST00000663976.1	Assembled from SLRseq reads (SRP049776)
ENST00000656563.1	Assembled from SLRseq reads (SRP049776)
ENST00000664006.1	Assembled from SLRseq reads (SRP049776)
ENST00000663841.1	Assembled from SLRseq reads (SRP049776)
ENST00000655628.1	Assembled from SLRseq reads (SRP049776)
ENST00000654888.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654888.1	Assembled from SLRseq reads (SRP049776)
ENST00000606251.2	Assembled from SLRseq reads (SRP049776)
ENST00000262461.7	MANE_select
ENST00000262464.9	MANE_select
ENST00000262464.9	genebuild_only_MANE
ENST00000502468.5	GENCODE experimental pipeline
ENST00000262462.9	MANE_select
ENST00000395266.5	alternative 5' UTR
ENST00000506176.1	alternative 5' UTR
ENST00000173527.6	MANE_select
ENST00000514194.5	GENCODE experimental pipeline
ENST00000665595.1	Assembled from RACEseq reads
ENST00000661962.1	Assembled from SLRseq reads (SRP049776)
ENST00000502827.1	GENCODE experimental pipeline
ENST00000653455.1	Assembled from SLRseq reads (SRP049776)
ENST00000661736.1	Assembled from SLRseq reads (SRP049776)
ENST00000655036.1	Assembled from SLRseq reads (SRP049776)
ENST00000670057.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000564719.2	MANE_select
ENST00000305031.5	MANE_select
ENST00000661392.1	Assembled from SLRseq reads (SRP049776)
ENST00000304043.10	MANE_select
ENST00000508495.5	GENCODE experimental pipeline
ENST00000379380.9	MANE_select
ENST00000505065.2	MANE_select
ENST00000503291.5	GENCODE experimental pipeline
ENST00000509018.6	MANE_select
ENST00000513227.5	GENCODE experimental pipeline
ENST00000503398.2	NMD likely if extended
ENST00000503398.2	QC splicing correct
ENST00000307968.11	NP_001008738.2
ENST00000307954.12	GENCODE experimental pipeline
ENST00000510461.6	MANE_select
ENST00000442687.6	MANE_select
ENST00000652469.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000652469.1	ID: align_id:3712780|asmbl_202945
ENST00000652469.1	SLR-seq_HsBN_lib8 : HsBN_lib8:Read_370841-Barcode=BC180:length=770 ; SLR-seq_HsBN_lib10 : HsBN_lib10:Read_282967-Barcode=BC041:length=572 ; SLR-seq_HsBN_lib12 : HsBN_lib12:Read_453077-Barcode=BC023:length=502, HsBN_lib12:Read_117260-Barcode=BC097:length=2501, HsBN_lib12:Read_495713-Barcode=BC021:length=647 ; SLR-seq_HsBN_lib7 : HsBN_lib7:Read_427411-Barcode=BC003:length=866, HsBN_lib7:Read_375213-Barcode=BC012:length=549 ; SLR-seq_TB0000033 : TB0000033-DNA_A01-LRAAD-01:Read_400429-Barcode=BC349:length=924, TB0000033-DNA_A01-LRAAD-01:Read_326635-Barcode=BC167:length=507 ; SLR-seq_TB0000032 : TB0000032-DNA_A01-LRAAD-01:Read_276248-Barcode=BC032:length=1055 ; SLR-seq_TB0000034 : TB0000034-DNA_A01-LRAAD-01:Read_292533-Barcode=BC065:length=561, TB0000034-DNA_A01-LRAAD-01:Read_333838-Barcode=BC158:length=1326 ; SLR-seq_HsBN_lib6 : HsBN_lib6:Read_345111-Barcode=BC093:length=607, HsBN_lib6:Read_181822-Barcode=BC281:length=1932 ; SLR-seq_HsBN_lib9 : HsBN_lib9:Read_288035-Barcode=BC211:length=611 ; SLR-seq_TB0000035 : TB0000035-DNA_A01-LRAAD-01:Read_385977-Barcode=BC308:length=815 ;
ENST00000651883.2	LR annotation
ENST00000651883.2	MANE_select
ENST00000379244.5	GENCODE experimental pipeline
ENST00000379240.5	GENCODE experimental pipeline
ENST00000416557.5	QC splicing correct
ENST00000477640.1	GENCODE experimental pipeline
ENST00000424244.1	GENCODE experimental pipeline
ENST00000296870.3	MANE_select
ENST00000296871.4	MANE_select
ENST00000360568.8	CAGE supported TSS
ENST00000360568.8	MANE_select
ENST00000379086.5	variant 4; alternatively spliced in 5' UTR
ENST00000166534.8	variant 3; alternatively spliced in 5' UTR
ENST00000379100.7	alternative 5' UTR
ENST00000253754.8	MANE_select
ENST00000418373.1	GENCODE experimental pipeline
ENST00000200652.4	MANE_select
ENST00000425923.1	NMD likely if extended
ENST00000669845.1	Assembled from SLRseq reads (SRP049776)
ENST00000453876.1	Added 9/1/07 by jm12
ENST00000649993.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000666504.1	Assembled from SLRseq reads (SRP049776)
ENST00000668364.1	Assembled from SLRseq reads (SRP049776)
ENST00000245407.8	MANE_select
ENST00000437841.6	QC splicing correct
ENST00000461203.5	novel transcript
ENST00000454380.1	GENCODE experimental pipeline
ENST00000422204.1	GENCODE experimental pipeline
ENST00000679762.1	Snaptron_GTEX
ENST00000679762.1	intropolis
ENST00000681634.1	Snaptron_GTEX
ENST00000681634.1	intropolis
ENST00000443093.2	GENCODE experimental pipeline
ENST00000680594.1	Snaptron_GTEX
ENST00000680594.1	intropolis
ENST00000679964.1	Snaptron_GTEX
ENST00000679964.1	intropolis
ENST00000679786.1	Snaptron_GTEX
ENST00000679786.1	intropolis
ENST00000679945.1	Snaptron_GTEX
ENST00000679945.1	intropolis
ENST00000681049.1	Snaptron_GTEX
ENST00000681049.1	intropolis
ENST00000680380.1	Snaptron_GTEX
ENST00000680380.1	intropolis
ENST00000245414.9	MANE_select
ENST00000405885.6	alternative 5' UTR
ENST00000680139.1	Snaptron_GTEX
ENST00000680139.1	intropolis
ENST00000681240.1	Snaptron_GTEX
ENST00000681240.1	intropolis
ENST00000681336.1	Snaptron_GTEX
ENST00000681336.1	intropolis
ENST00000680562.1	Snaptron_GTEX
ENST00000680562.1	intropolis
ENST00000681694.1	Snaptron_GTEX
ENST00000681694.1	intropolis
ENST00000681595.1	Snaptron_GTEX
ENST00000681595.1	intropolis
ENST00000679743.1	Snaptron_GTEX
ENST00000679743.1	intropolis
ENST00000681715.1	Snaptron_GTEX
ENST00000681715.1	intropolis
ENST00000679860.1	Snaptron_GTEX
ENST00000679860.1	intropolis
ENST00000681197.1	Snaptron_GTEX
ENST00000681197.1	intropolis
ENST00000681458.1	Snaptron_GTEX
ENST00000681458.1	intropolis
ENST00000679700.1	Snaptron_GTEX
ENST00000679700.1	intropolis
ENST00000681749.1	Snaptron_GTEX
ENST00000681749.1	intropolis
ENST00000680237.1	NAGNAG splice site
ENST00000680237.1	Snaptron_GTEX
ENST00000680237.1	intropolis
ENST00000458069.5	QC splicing correct
ENST00000458069.5	alternative 5' UTR
ENST00000679633.1	Snaptron_GTEX
ENST00000679633.1	intropolis
ENST00000439555.2	GENCODE experimental pipeline
ENST00000679820.1	Snaptron_GTEX
ENST00000679820.1	intropolis
ENST00000679620.1	Snaptron_GTEX
ENST00000679620.1	intropolis
ENST00000476613.1	alternative 5' UTR
ENST00000681573.1	Snaptron_GTEX
ENST00000681573.1	intropolis
ENST00000679499.1	Snaptron_GTEX
ENST00000679499.1	intropolis
ENST00000680352.1	Snaptron_GTEX
ENST00000680352.1	intropolis
ENST00000679440.1	Snaptron_GTEX
ENST00000679440.1	alternative 5' UTR
ENST00000679440.1	intropolis
ENST00000681584.1	Snaptron_GTEX
ENST00000681584.1	alternative 5' UTR
ENST00000681584.1	intropolis
ENST00000680796.1	Snaptron_GTEX
ENST00000680796.1	alternative 5' UTR
ENST00000680796.1	intropolis
ENST00000463784.6	Snaptron_GTEX
ENST00000463784.6	alternative 5' UTR
ENST00000463784.6	intropolis
ENST00000680848.1	CAGE supported TSS
ENST00000680848.1	Snaptron_GTEX
ENST00000680848.1	alternative 5' UTR
ENST00000680848.1	intropolis
ENST00000679522.1	CAGE supported TSS
ENST00000679522.1	Snaptron_GTEX
ENST00000679522.1	alternative 5' UTR
ENST00000679522.1	intropolis
ENST00000681603.1	CAGE supported TSS
ENST00000681603.1	Snaptron_GTEX
ENST00000681603.1	alternative 5' UTR
ENST00000681603.1	intropolis
ENST00000679500.1	Snaptron_GTEX
ENST00000679500.1	intropolis
ENST00000231454.6	MANE_select
ENST00000416135.5	GENCODE experimental pipeline
ENST00000533482.5	isoform 2
ENST00000378823.8	CAGE supported TSS
ENST00000378823.8	LR annotation
ENST00000378823.8	MANE_select
ENST00000378823.8	isoform 1
ENST00000453394.5	GENCODE experimental pipeline
ENST00000453394.5	QC splicing correct
ENST00000434288.1	GENCODE experimental pipeline
ENST00000651249.1	alternative 3' UTR
ENST00000435042.1	GENCODE experimental pipeline
ENST00000304506.7	MANE_select
ENST00000231449.7	MANE_select
ENST00000495905.1	GENCODE experimental pipeline
ENST00000403231.6	MANE_select
ENST00000450441.5	GENCODE experimental pipeline
ENST00000428744.1	GENCODE experimental pipeline
ENST00000378731.6	FLJ16793
ENST00000378731.6	MANE_select
ENST00000378719.7	MANE_select
ENST00000378721.8	GENCODE experimental pipeline
ENST00000378706.5	GENCODE experimental pipeline
ENST00000453480.5	GENCODE experimental pipeline
ENST00000378693.4	MANE_select
ENST00000378679.8	MANE_select
ENST00000378676.1	GENCODE experimental pipeline
ENST00000495680.2	NMD likely if extended
ENST00000378670.8	MANE_select
ENST00000296877.3	MANE_select
ENST00000265343.10	MANE_select
ENST00000509437.6	MANE_select
ENST00000655591.1	Assembled from SLRseq reads (SRP049776)
ENST00000665702.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000304858.7	MANE_select
ENST00000265342.12	MANE_select
ENST00000513561.1	GENCODE experimental pipeline
ENST00000231512.5	MANE_select
ENST00000265333.8	MANE_select
ENST00000342854.10	MANE_select
ENST00000518887.5	alternative 5' UTR
ENST00000521639.5	alternative 5' UTR
ENST00000522375.5	alternative 5' UTR
ENST00000378560.8	NP_963965.1
ENST00000520958.5	NP_963963
ENST00000520958.5	NP_998813
ENST00000520958.5	alternative 5' UTR
ENST00000518915.5	NP_963964
ENST00000353411.11	MANE_select
ENST00000517625.5	alternative 5' UTR
ENST00000522855.5	alternative 5' UTR
ENST00000519321.5	alternative 5' UTR
ENST00000520417.1	alternative 5' UTR
ENST00000523359.1	alternative 5' UTR
ENST00000481195.6	MANE_select
ENST00000265334.9	MANE_select
ENST00000265339.7	MANE_select
ENST00000503470.1	GENCODE experimental pipeline
ENST00000458198.3	MANE_select
ENST00000657528.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000515627.2	GENCODE experimental pipeline
ENST00000431355.2	alternative 5' UTR
ENST00000361895.6	NAGNAG splice site
ENST00000402835.5	GENCODE experimental pipeline
ENST00000402835.5	alternative 5' UTR
ENST00000681547.1	align_id:3713220|asmbl_203385
ENST00000680418.1	align_id:3713219|asmbl_203384
ENST00000395003.5	alternative 5' UTR
ENST00000681820.1	align_id:3713216|asmbl_203381
ENST00000681792.1	align_id:3713223|asmbl_203388
ENST00000512386.6	align_id:3713217|asmbl_203382
ENST00000612830.2	align_id:3713215|asmbl_203380
ENST00000681019.1	align_id:3713218|asmbl_203383
ENST00000681498.1	align_id:3713222|asmbl_203387
ENST00000681498.1	alternative 5' UTR
ENST00000470876.1	FLJ21348
ENST00000402673.7	MANE_select
ENST00000507419.5	GENCODE experimental pipeline
ENST00000439578.5	alternative 5' UTR
ENST00000505758.5	alternative 5' UTR
ENST00000502286.1	alternative 5' UTR
ENST00000398844.7	MANE_select
ENST00000678771.1	NAGNAG splice site
ENST00000297156.4	MANE_select
ENST00000514518.1	GENCODE experimental pipeline
ENST00000507392.5	non canonical conserved
ENST00000452510.7	MANE_select
ENST00000452510.7	non canonical conserved
ENST00000452510.7	non-canonical spice between exons 19 and 20
ENST00000338051.4	alternative 5' UTR
ENST00000394976.4	FLJ37562
ENST00000394976.4	MANE_select
ENST00000504727.1	GENCODE experimental pipeline
ENST00000435259.2	alternative 5' UTR
ENST00000508791.1	alternative 5' UTR
ENST00000358387.9	MANE_select
ENST00000506916.1	GENCODE experimental pipeline
ENST00000508810.1	GENCODE experimental pipeline
ENST00000254908.11	MANE_select
ENST00000282611.8	MANE_select
ENST00000265340.12	MANE_select
ENST00000506438.5	alternative 5' UTR
ENST00000507253.5	alternative 5' UTR
ENST00000502676.1	alternative 5' UTR
ENST00000624272.3	GENCODE experimental pipeline
ENST00000510038.1	alternative 5' UTR
ENST00000503143.3	MANE_select
ENST00000537858.2	MANE_select
ENST00000314744.6	MANE_select
ENST00000512158.6	MANE_select
ENST00000506592.1	GENCODE experimental pipeline
ENST00000638019.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670246.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000637197.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656373.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000274520.2	MANE_select
ENST00000274507.6	MANE_select
ENST00000297158.11	non canonical TEC
ENST00000442011.7	MANE_select
ENST00000508767.5	GENCODE experimental pipeline
ENST00000508767.5	non canonical TEC
ENST00000508767.5	non-canonical acceptor splice site between exon 2 and 3
ENST00000503087.1	GENCODE experimental pipeline
ENST00000545279.6	MANE_select
ENST00000507118.5	alternative 5' UTR
ENST00000511116.5	alternative 5' UTR
ENST00000509297.6	alternative 5' UTR
ENST00000515005.1	alternative 5' UTR
ENST00000506223.1	alternative 5' UTR
ENST00000607574.2	CAGE supported TSS
ENST00000607574.2	MANE_select
ENST00000513104.6	MANE_select
ENST00000513958.1	GENCODE experimental pipeline
ENST00000514282.1	GENCODE experimental pipeline
ENST00000653158.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000511165.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000511165.6	GENCODE experimental pipeline
ENST00000666378.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665110.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446720.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446720.3	GENCODE experimental pipeline
ENST00000657590.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658501.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660537.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659712.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662288.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662288.1	Assembled from SLRseq reads (SRP049776)
ENST00000656447.1	Assembled from SLRseq reads (SRP049776)
ENST00000667761.1	Assembled from SLRseq reads (SRP049776)
ENST00000394945.6	MANE_select
ENST00000505690.1	alternative 5' UTR
ENST00000309755.9	MANE_select
ENST00000505853.1	GENCODE experimental pipeline
ENST00000314940.7	MANE_select
ENST00000661977.1	Assembled from SLRseq reads (SRP049776)
ENST00000514616.6	Assembled from SLRseq reads (SRP049776)
ENST00000666934.1	Assembled from SLRseq reads (SRP049776)
ENST00000508281.3	Assembled from SLRseq reads (SRP049776)
ENST00000670115.1	Assembled from SLRseq reads (SRP049776)
ENST00000239926.9	MANE_select
ENST00000515645.1	GENCODE experimental pipeline
ENST00000508638.5	GENCODE experimental pipeline
ENST00000508883.6	MANE_select
ENST00000502810.5	GENCODE experimental pipeline
ENST00000290431.5	NP_055201.2
ENST00000514310.5	alternative 5' UTR
ENST00000502471.5	alternative 5' UTR
ENST00000509596.5	alternative 5' UTR
ENST00000508403.5	alternative 5' UTR
ENST00000505961.1	alternative 5' UTR
ENST00000506684.6	MANE_select
ENST00000265191.4	MANE_select
ENST00000254900.10	MANE_select
ENST00000441656.5	GENCODE experimental pipeline
ENST00000511898.1	GENCODE experimental pipeline
ENST00000394894.8	MANE_select
ENST00000394886.7	MANE_select
ENST00000274721.8	MANE_select
ENST00000323760.11	MANE_select
ENST00000648466.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000513970.5	alternative 5' UTR
ENST00000503022.5	alternative 5' UTR
ENST00000510119.1	GENCODE experimental pipeline
ENST00000512180.5	CAGE supported TSS
ENST00000512180.5	non canonical conserved
ENST00000511595.5	CAGE supported TSS
ENST00000434981.6	alternative 5' UTR
ENST00000239906.10	MANE_select
ENST00000505136.1	not organism-supported
ENST00000504539.1	GENCODE experimental pipeline
ENST00000314358.10	MANE_select
ENST00000378339.7	MANE_select
ENST00000506158.5	GENCODE experimental pipeline
ENST00000512126.5	GENCODE experimental pipeline
ENST00000239938.5	LR annotation
ENST00000239938.5	MANE_select
ENST00000499810.6	GENCODE experimental pipeline
ENST00000360541.10	MANE_select
ENST00000503014.5	GENCODE experimental pipeline
ENST00000572514.5	alternative 5' UTR
ENST00000677066.1	alternative 5' UTR
ENST00000678051.1	align_id:3713752|asmbl_203917
ENST00000678384.1	align_id:3713725|asmbl_203890
ENST00000677553.1	align_id:3713728|asmbl_203893
ENST00000678794.1	align_id:3713753|asmbl_203918
ENST00000297185.9	CAGE supported TSS
ENST00000297185.9	LR annotation
ENST00000297185.9	MANE_select
ENST00000677527.1	align_id:3713727|asmbl_203892
ENST00000677988.1	align_id:3713722|asmbl_203887
ENST00000649578.2	align_id:3713763|asmbl_203928
ENST00000678300.1	align_id:3713723|asmbl_203888
ENST00000677425.1	align_id:3713777|asmbl_203942
ENST00000677064.1	align_id:3713786|asmbl_203951
ENST00000677693.1	align_id:3713799|asmbl_203964
ENST00000649692.2	align_id:3713798|asmbl_203963
ENST00000678551.1	align_id:3713785|asmbl_203950
ENST00000678551.1	non canonical U12
ENST00000524109.2	align_id:3713783|asmbl_203948
ENST00000507115.6	align_id:1359499|asmbl_79402
ENST00000508003.2	align_id:1359500|asmbl_79403
ENST00000517980.5	alternative 5' UTR
ENST00000522227.5	alternative 5' UTR
ENST00000524127.5	alternative 5' UTR
ENST00000523912.5	alternative 5' UTR
ENST00000520339.5	alternative 5' UTR
ENST00000302763.12	MANE_select
ENST00000519113.5	alternative 5' UTR
ENST00000520158.5	alternative 5' UTR
ENST00000518381.5	alternative 5' UTR
ENST00000520260.5	alternative 5' UTR
ENST00000523298.5	alternative 5' UTR
ENST00000520865.5	alternative 5' UTR
ENST00000519634.5	alternative 5' UTR
ENST00000517533.5	alternative 5' UTR
ENST00000523685.5	alternative 5' UTR
ENST00000519768.5	alternative 5' UTR
ENST00000517656.5	alternative 5' UTR
ENST00000521683.5	alternative 5' UTR
ENST00000521640.5	alternative 5' UTR
ENST00000519116.5	alternative 5' UTR
ENST00000520522.1	alternative 5' UTR
ENST00000274711.7	MANE_select
ENST00000394817.7	MANE_select
ENST00000265195.9	alternative 5' UTR
ENST00000509534.5	GENCODE experimental pipeline
ENST00000508639.5	alternative 5' UTR
ENST00000513453.5	alternative 5' UTR
ENST00000505830.5	alternative 5' UTR
ENST00000505353.1	alternative 5' UTR
ENST00000512107.5	alternative 5' UTR
ENST00000514694.5	alternative 5' UTR
ENST00000504203.5	alternative 5' UTR
ENST00000502929.5	alternative 5' UTR
ENST00000502929.5	non canonical TEC
ENST00000502929.5	non-canonical acceptor splice site between exons 4 and 5
ENST00000394800.6	GENCODE experimental pipeline
ENST00000509644.5	alternative 5' UTR
ENST00000505016.2	alternative 5' UTR
ENST00000502394.1	QC splicing correct
ENST00000502394.1	alternative 5' UTR
ENST00000513678.5	alternative 5' UTR
ENST00000504045.5	alternative 5' UTR
ENST00000510056.5	GENCODE experimental pipeline
ENST00000394805.8	MANE_select
ENST00000618441.5	alternative 5' UTR
ENST00000508689.1	alternative 5' UTR
ENST00000514488.1	alternative 5' UTR
ENST00000503340.1	alternative 5' UTR
ENST00000504023.1	alternative 5' UTR
ENST00000512040.1	NMD likely if extended
ENST00000507755.5	alternative 5' UTR
ENST00000265192.9	MANE_select
ENST00000511381.1	not organism-supported
ENST00000511706.5	GENCODE experimental pipeline
ENST00000394795.6	alternative 5' UTR
ENST00000510080.1	alternative 5' UTR
ENST00000348729.8	MANE_select
ENST00000504513.1	GENCODE experimental pipeline
ENST00000302125.9	MANE_select
ENST00000434752.4	MANE_select
ENST00000450845.7	MANE_select
ENST00000509959.5	GENCODE experimental pipeline
ENST00000507779.2	not organism-supported
ENST00000515559.2	GENCODE experimental pipeline
ENST00000302060.10	MANE_select
ENST00000514052.1	GENCODE experimental pipeline
ENST00000515581.5	alternative 5' UTR
ENST00000515277.5	alternative 5' UTR
ENST00000512473.5	alternative 5' UTR
ENST00000510908.1	gene fragments AC142391.1-001 and AC138517.3-001 are part of the same gene; an assembly gap between them contains one or more exons
ENST00000515823.1	gene fragments AC142391.1-001 and AC138517.3-001 are part of the same gene; an assembly gap between them contains one or more exons
ENST00000330794.9	CAGE supported TSS
ENST00000330794.9	LR annotation
ENST00000330794.9	MANE_select
ENST00000652271.1	alternative 5' UTR
ENST00000651699.1	CAGE supported TSS
ENST00000651699.1	alternative 5' UTR
ENST00000657350.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000511725.5	alternative 5' UTR
ENST00000505007.5	alternative 5' UTR
ENST00000398733.8	MANE_select
ENST00000505548.5	NP_862821.1
ENST00000502295.1	alternative 5' UTR
ENST00000504944.1	alternative 5' UTR
ENST00000302517.8	MANE_select
ENST00000507139.5	alternative 5' UTR
ENST00000504844.1	alternative 5' UTR
ENST00000502336.5	alternative 5' UTR
ENST00000520967.1	alternative 5' UTR
ENST00000511048.1	alternative 5' UTR
ENST00000512816.1	alternative 5' UTR
ENST00000509238.1	alternative 5' UTR
ENST00000502716.1	alternative 5' UTR
ENST00000503511.1	alternative 5' UTR
ENST00000511457.1	alternative 5' UTR
ENST00000511591.1	alternative 5' UTR
ENST00000657032.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000515306.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663789.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666513.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000274710.4	MANE_select
ENST00000651792.1	non canonical conserved
ENST00000361474.6	MANE_select
ENST00000340391.8	CAGE supported TSS
ENST00000663778.1	Assembled from SLRseq reads (SRP049776)
ENST00000660071.1	Assembled from SLRseq reads (SRP049776)
ENST00000654348.1	Assembled from SLRseq reads (SRP049776)
ENST00000671132.1	Assembled from SLRseq reads (SRP049776)
ENST00000656599.1	Assembled from SLRseq reads (SRP049776)
ENST00000522747.6	Assembled from SLRseq reads (SRP049776)
ENST00000653092.1	Assembled from SLRseq reads (SRP049776)
ENST00000521563.6	Assembled from SLRseq reads (SRP049776)
ENST00000499203.7	Assembled from SLRseq reads (SRP049776)
ENST00000659960.1	Assembled from SLRseq reads (SRP049776)
ENST00000659306.1	Assembled from SLRseq reads (SRP049776)
ENST00000671248.1	Assembled from SLRseq reads (SRP049776)
ENST00000518790.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668151.1	Assembled from SLRseq reads (SRP049776)
ENST00000502351.1	GENCODE experimental pipeline
ENST00000331327.5	MANE_select
ENST00000333305.5	MANE_select
ENST00000509589.5	GENCODE experimental pipeline
ENST00000261811.6	MANE_select
ENST00000261811.6	ORF1-FL49
ENST00000261813.9	MANE_select
ENST00000230990.7	MANE_select
ENST00000506757.7	MANE_select
ENST00000507521.1	GENCODE experimental pipeline
ENST00000666403.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000360839.7	MANE_select
ENST00000412116.5	GENCODE experimental pipeline
ENST00000462121.1	GENCODE experimental pipeline
ENST00000532219.5	NP_065741.3
ENST00000437495.1	not organism-supported
ENST00000336283.8	upstream ATG
ENST00000310331.3	MANE_select
ENST00000357560.9	MANE_select
ENST00000511201.2	GENCODE experimental pipeline
ENST00000623481.3	CAGE supported TSS
ENST00000323146.8	upstream uORF
ENST00000514199.1	alternative 5' UTR
ENST00000302014.11	MANE_select
ENST00000512545.1	GENCODE experimental pipeline
ENST00000252102.9	MANE_select
ENST00000512088.1	GENCODE experimental pipeline
ENST00000509217.6	GENCODE experimental pipeline
ENST00000394671.8	MANE_select
ENST00000417647.7	MANE_select
ENST00000417647.7	non canonical U12
ENST00000507593.5	GENCODE experimental pipeline
ENST00000515015.1	non canonical U12
ENST00000542735.2	MANE_select
ENST00000675355.1	NMD likely if extended
ENST00000431330.7	NP_001276022.1
ENST00000504156.7	LR annotation
ENST00000504156.7	MANE_select
ENST00000646229.1	NAGNAG splice site
ENST00000415192.6	NP_001276021.1
ENST00000643996.1	alternative 5' UTR
ENST00000509299.6	alternative 5' UTR
ENST00000230771.9	LR annotation
ENST00000230771.9	MANE_select
ENST00000646468.1	alternative 5' UTR
ENST00000645749.1	alternative 5' UTR
ENST00000274712.8	MANE_select
ENST00000655235.1	Assembled from SLRseq reads (SRP049776)
ENST00000660962.1	Assembled from SLRseq reads (SRP049776)
ENST00000378133.4	NP_113598.1
ENST00000504120.4	MANE_select
ENST00000504120.4	NP_061723.1
ENST00000394633.7	NP_113599.1
ENST00000378132.2	NP_113683.1
ENST00000526136.2	MANE_select
ENST00000526136.2	NP_061728.1
ENST00000520672.2	NP_113684.1
ENST00000532566.3	NP_113685.1
ENST00000522353.3	MANE_select
ENST00000522353.3	NP_061729.1
ENST00000614258.1	NP_113689.1
ENST00000529859.2	MANE_select
ENST00000529859.2	NP_061731.1
ENST00000527624.1	NP_114037.1
ENST00000527624.1	upstream ATG
ENST00000378123.4	NP_114062.1
ENST00000531613.2	MANE_select
ENST00000531613.2	NP_061734.1
ENST00000378122.4	NP_054724.1
ENST00000532602.2	MANE_select
ENST00000532602.2	NP_114063.1
ENST00000562220.2	NP_114065.1
ENST00000307360.6	MANE_select
ENST00000307360.6	NP_061724.1
ENST00000506939.6	NP_114066.1
ENST00000506751.2	Transcribed as part of the 3' UTR of PCDHA10 variant 3 (OTTHUMT00000477562)
ENST00000616325.1	NP_114067.1
ENST00000398640.7	MANE_select
ENST00000398640.7	NP_061725.1
ENST00000613593.1	NP_114070.1
ENST00000613593.1	upstream ATG
ENST00000398631.3	MANE_select
ENST00000398631.3	NP_061726.1
ENST00000289272.3	MANE_select
ENST00000289272.3	NP_061727.1
ENST00000409494.5	GENCODE experimental pipeline
ENST00000617769.1	NP_114071.1
ENST00000253807.3	MANE_select
ENST00000253807.3	NP_061721.2
ENST00000409700.4	NP_114088.2
ENST00000615316.1	NP_114089.1
ENST00000289269.7	MANE_select
ENST00000289269.7	NP_061722.1
ENST00000656356.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000306549.6	MANE_select
ENST00000306549.6	NP_037472.2
ENST00000194155.7	MANE_select
ENST00000194155.7	NP_061759.1
ENST00000660221.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000231130.3	MANE_select
ENST00000231130.3	NP_061760.1
ENST00000194152.4	MANE_select
ENST00000194152.4	NP_061761.1
ENST00000231134.8	MANE_select
ENST00000231134.8	NP_056484.1
ENST00000665155.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000624424.1	non canonical TEC
ENST00000231136.4	MANE_select
ENST00000231136.4	NP_061762.1
ENST00000231137.6	MANE_select
ENST00000231137.6	NP_061763.1
ENST00000239444.4	MANE_select
ENST00000609684.3	MANE_select
ENST00000609684.3	NP_066008.2
ENST00000316105.7	MANE_select
ENST00000316105.7	NP_061992.3
ENST00000239446.6	MANE_select
ENST00000239446.6	NP_061753.1
ENST00000354757.5	MANE_select
ENST00000354757.5	NP_061754.1
ENST00000624949.1	Swiss-Prot isoform Q9Y5F1-2.1
ENST00000239450.4	MANE_select
ENST00000239450.4	NP_061755.1
ENST00000341948.6	MANE_select
ENST00000341948.6	NP_061756.1
ENST00000239449.7	MANE_select
ENST00000239449.7	NP_061757.1
ENST00000231173.6	MANE_select
ENST00000231173.6	NP_061758.1
ENST00000313368.8	MANE_select
ENST00000624761.1	alternative 5' UTR
ENST00000239451.7	MANE_select
ENST00000670972.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000378105.4	NP_114382.1
ENST00000517417.2	NP_061735.1
ENST00000528330.2	NP_114398.1
ENST00000394576.3	MANE_select
ENST00000394576.3	NP_061738.1
ENST00000619750.1	NP_114400.1
ENST00000253812.8	MANE_select
ENST00000253812.8	NP_061739.2
ENST00000611598.1	NP_115266.1
ENST00000523390.1	NP_061745.1
ENST00000571252.3	MANE_select
ENST00000571252.3	NP_061740.2
ENST00000612927.1	NP_114442.2
ENST00000622527.1	NP_115267.1
ENST00000522605.1	NP_061746.1
ENST00000611914.1	NP_114443.1
ENST00000518069.1	NP_061741.1
ENST00000576222.2	MANE_select
ENST00000576222.2	NP_061747.1
ENST00000618934.1	NP_115268.1
ENST00000517434.3	MANE_select
ENST00000517434.3	NP_061742.1
ENST00000610583.1	NP_114475.1
ENST00000617050.1	NP_114476.1
ENST00000518325.2	MANE_select
ENST00000518325.2	NP_061743.1
ENST00000615384.1	NP_115269.1
ENST00000519479.2	MANE_select
ENST00000519479.2	NP_003727.1
ENST00000610569.1	NP_054723.1
ENST00000398604.3	MANE_select
ENST00000398604.3	NP_114477.1
ENST00000621169.1	NP_115270.1
ENST00000617380.1	NP_061748.1
ENST00000616887.1	NP_114478.1
ENST00000573521.1	NP_061744.1
ENST00000616430.1	NP_115271.1
ENST00000520790.1	NP_061749.1
ENST00000612503.1	NP_114479.1
ENST00000398610.2	NP_061736.1
ENST00000398594.4	MANE_select
ENST00000398594.4	NP_061750.1
ENST00000622044.1	NP_114480.1
ENST00000398587.7	MANE_select
ENST00000398587.7	NP_061737.1
ENST00000518882.2	NP_114481.1
ENST00000252085.4	MANE_select
ENST00000252085.4	NP_003726.1
ENST00000613314.1	NP_115265.1
ENST00000611950.1	NP_115778.1
ENST00000308177.5	MANE_select
ENST00000308177.5	NP_002579.2
ENST00000617641.4	NP_115779.1
ENST00000617094.1	NP_115782.1
ENST00000306593.1	NP_061751.1
ENST00000252087.3	MANE_select
ENST00000252087.3	NP_061752.1
ENST00000610789.1	NP_115783.1
ENST00000476339.1	FLJ36945
ENST00000389054.8	AT-AC splicing between exons 11 and 12, 24 and 25
ENST00000389054.8	MANE_select
ENST00000389054.8	non canonical U12
ENST00000647433.1	NP_001300936.1
ENST00000647433.1	non canonical U12
ENST00000448451.6	alternative 5' UTR
ENST00000643718.1	alternative 5' UTR
ENST00000643718.1	non canonical TEC
ENST00000518047.5	AT-AC splicing between exons 11 and 12, 24 and 25
ENST00000518047.5	gomi
ENST00000518047.5	non canonical U12
ENST00000468119.3	g/ga ag\\\\ splicing between exons 1 and 2
ENST00000468119.3	non canonical TEC
ENST00000643312.1	CAGE supported TSS
ENST00000523100.5	non canonical U12
ENST00000305264.8	MANE_select
ENST00000297164.8	MANE_select
ENST00000435817.7	MANE_select
ENST00000508305.5	GENCODE experimental pipeline
ENST00000239440.9	MANE_select
ENST00000513878.5	GENCODE experimental pipeline
ENST00000653358.1	Assembled from SLRseq reads (SRP049776)
ENST00000663050.1	Assembled from SLRseq reads (SRP049776)
ENST00000654432.1	Assembled from SLRseq reads (SRP049776)
ENST00000287008.8	MANE_select
ENST00000503492.5	GENCODE experimental pipeline
ENST00000659661.1	Assembled from SLRseq reads (SRP049776)
ENST00000654307.1	Assembled from SLRseq reads (SRP049776)
ENST00000432126.7	MANE_select
ENST00000508751.1	GENCODE experimental pipeline
ENST00000231484.4	MANE_select
ENST00000231484.4	NP_057664.1
ENST00000510041.1	alternative 5' UTR
ENST00000511961.5	alternative 5' UTR
ENST00000506822.5	alternative 5' UTR
ENST00000513019.5	alternative 5' UTR
ENST00000394520.7	MANE_select
ENST00000394514.6	NP_899645.1
ENST00000507163.5	alternative 5' UTR
ENST00000506004.5	alternative 5' UTR
ENST00000507291.1	alternative 5' UTR
ENST00000513454.5	GENCODE experimental pipeline
ENST00000311337.11	MANE_select
ENST00000500692.6	alternative 5' UTR
ENST00000503794.5	alternative 5' UTR
ENST00000504139.5	GENCODE experimental pipeline
ENST00000505689.5	GENCODE experimental pipeline
ENST00000510194.5	alternative 5' UTR
ENST00000503229.5	alternative 5' UTR
ENST00000504424.1	alternative 5' UTR
ENST00000253814.6	MANE_select
ENST00000434127.3	MANE_select
ENST00000668207.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000337706.7	MANE_select
ENST00000407758.5	GENCODE experimental pipeline
ENST00000441680.6	I have extended the 5' and 3' ends of this transcipt using Affy08248A11
ENST00000419524.6	Affy08248D11
ENST00000419524.6	encode_confirmed
ENST00000419524.6	exons_1-4
ENST00000659517.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655828.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660053.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666438.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667174.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666274.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652991.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666541.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658459.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665462.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432677.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669649.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660321.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652722.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000658361.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664609.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667247.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662893.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654654.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654613.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658433.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659596.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659959.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668371.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670541.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666936.1	Assembled from SLRseq reads (SRP049776)
ENST00000645722.2	MANE_select
ENST00000274498.9	CAGE supported TSS
ENST00000274498.9	LR annotation
ENST00000475287.2	CAGE supported TSS
ENST00000451259.1	CAGE supported TSS
ENST00000469131.6	CAGE supported TSS
ENST00000464838.1	GENCODE experimental pipeline
ENST00000425417.2	non canonical TEC
ENST00000394464.7	CAGE supported TSS
ENST00000394464.7	LR annotation
ENST00000394464.7	MANE_select
ENST00000504572.5	alternative 5' UTR
ENST00000394466.6	alternative 5' UTR
ENST00000503201.1	alternative 5' UTR
ENST00000510170.5	alternative 5' UTR
ENST00000508760.5	alternative 5' UTR
ENST00000514699.1	alternative 5' UTR
ENST00000502500.1	alternative 5' UTR
ENST00000661034.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667084.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669728.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661617.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000274496.10	MANE_select
ENST00000448443.6	alternative 5' UTR
ENST00000519064.5	alternative 5' UTR
ENST00000522203.5	alternative 5' UTR
ENST00000512467.6	MANE_select
ENST00000507359.3	alternative 5' UTR
ENST00000649345.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000659832.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000661692.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653996.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000512571.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656171.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000505416.5	GENCODE experimental pipeline
ENST00000377976.3	(transcript choice is easy but the start  and end points may not be but this matches mus)
ENST00000377976.3	MANE_select
ENST00000359120.9	MANE_select
ENST00000511217.1	alternative 3' UTR
ENST00000311450.9	MANE_select
ENST00000674181.1	Assembled from SLRseq reads (SRP049776)
ENST00000674471.1	Assembled from SLRseq reads (SRP049776)
ENST00000506231.6	Assembled from RACEseq reads
ENST00000506231.6	Assembled from SLRseq reads (SRP049776)
ENST00000674158.1	Assembled from SLRseq reads (SRP049776)
ENST00000674191.1	Assembled from SLRseq reads (SRP049776)
ENST00000674383.1	Assembled from SLRseq reads (SRP049776)
ENST00000674447.1	Assembled from SLRseq reads (SRP049776)
ENST00000674270.1	Assembled from SLRseq reads (SRP049776)
ENST00000674290.1	Assembled from SLRseq reads (SRP049776)
ENST00000674479.1	Assembled from SLRseq reads (SRP049776)
ENST00000674309.1	Assembled from SLRseq reads (SRP049776)
ENST00000674218.1	Assembled from SLRseq reads (SRP049776)
ENST00000674467.1	Assembled from SLRseq reads (SRP049776)
ENST00000674170.1	Assembled from SLRseq reads (SRP049776)
ENST00000674174.1	Assembled from SLRseq reads (SRP049776)
ENST00000674174.1	alternative 5' UTR
ENST00000394434.7	MANE_select
ENST00000674277.1	Assembled from SLRseq reads (SRP049776)
ENST00000674398.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674398.1	Assembled from SLRseq reads (SRP049776)
ENST00000674398.1	NAGNAG splice site
ENST00000504323.6	Assembled from RACEseq reads
ENST00000510191.5	overlapping uORF
ENST00000674310.1	Assembled from SLRseq reads (SRP049776)
ENST00000512412.2	Assembled from SLRseq reads (SRP049776)
ENST00000674417.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674417.1	Assembled from SLRseq reads (SRP049776)
ENST00000674412.1	Assembled from SLRseq reads (SRP049776)
ENST00000674450.1	Assembled from SLRseq reads (SRP049776)
ENST00000618084.2	Assembled from SLRseq reads (SRP049776)
ENST00000505223.6	Assembled from SLRseq reads (SRP049776)
ENST00000265271.7	MANE_select
ENST00000646991.2	CAGE supported TSS
ENST00000646991.2	LR annotation
ENST00000646991.2	MANE_select
ENST00000507391.1	GENCODE experimental pipeline
ENST00000679501.1	align_id:3715041|asmbl_205206
ENST00000549332.1	not organism-supported
ENST00000394411.9	CAGE supported TSS
ENST00000394411.9	MANE_select
ENST00000394411.9	alternative 5' UTR
ENST00000512639.5	GENCODE experimental pipeline
ENST00000512984.1	GENCODE experimental pipeline
ENST00000522831.1	NMD likely if extended
ENST00000660170.1	Assembled from SLRseq reads (SRP049776)
ENST00000397936.8	MANE_select
ENST00000398523.3	GENCODE experimental pipeline
ENST00000343218.10	MANE_select
ENST00000512722.1	alternative 5' UTR
ENST00000616793.5	MANE_select
ENST00000616793.5	genebuild_only_MANE
ENST00000265272.9	KIAA0555
ENST00000662767.1	Assembled from SLRseq reads (SRP049776)
ENST00000296695.10	MANE_select
ENST00000296694.5	MANE_select
ENST00000318315.5	MANE_select
ENST00000521206.5	alternative 5' UTR
ENST00000398454.5	NP_001121171.1
ENST00000359874.7	NP_001121170.1
ENST00000256084.8	MANE_select
ENST00000671159.1	Assembled from SLRseq reads (SRP049776)
ENST00000667608.1	Assembled from SLRseq reads (SRP049776)
ENST00000661004.1	Assembled from SLRseq reads (SRP049776)
ENST00000657331.1	Assembled from SLRseq reads (SRP049776)
ENST00000665055.1	Assembled from SLRseq reads (SRP049776)
ENST00000669063.1	Assembled from SLRseq reads (SRP049776)
ENST00000501695.4	Assembled from SLRseq reads (SRP049776)
ENST00000648571.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000661905.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000667841.1	Assembled from SLRseq reads (SRP049776)
ENST00000665452.1	Assembled from SLRseq reads (SRP049776)
ENST00000655946.1	Assembled from SLRseq reads (SRP049776)
ENST00000661718.1	Assembled from SLRseq reads (SRP049776)
ENST00000669375.1	Assembled from SLRseq reads (SRP049776)
ENST00000663936.1	Assembled from SLRseq reads (SRP049776)
ENST00000356972.1	NP_001001325.1
ENST00000514389.5	alternative 5' UTR
ENST00000325630.3	MANE_select
ENST00000513133.2	CAGE supported TSS
ENST00000638089.2	CAGE supported TSS
ENST00000638089.2	MANE_select
ENST00000398450.5	MANE_select
ENST00000398450.5	genebuild_only_MANE
ENST00000514394.1	GENCODE experimental pipeline
ENST00000274565.5	MANE_select
ENST00000377906.2	MANE_select
ENST00000340253.10	MANE_select
ENST00000517929.5	NP_001035262.2
ENST00000377888.8	MANE_select
ENST00000305988.6	MANE_select
ENST00000504690.5	GENCODE experimental pipeline
ENST00000515425.6	MANE_select
ENST00000512049.5	GENCODE experimental pipeline
ENST00000515304.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668914.1	Assembled from SLRseq reads (SRP049776)
ENST00000326685.11	AM393682
ENST00000309868.12	MANE_select
ENST00000506113.5	alternative 5' UTR
ENST00000296721.9	MANE_select
ENST00000648705.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000329271.8	MANE_select
ENST00000416916.2	GENCODE experimental pipeline
ENST00000274569.9	MANE_select
ENST00000261796.4	MANE_select
ENST00000505340.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000519898.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659590.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663766.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000509909.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661249.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653555.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000505254.6	has been annotated by HAVANA with transcripts not overlapping the MIR143. - gdr 23/09/2013
ENST00000656891.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660343.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655575.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000261798.10	CAGE supported TSS
ENST00000261798.10	LR annotation
ENST00000377843.8	MANE_select
ENST00000504676.5	CAGE supported TSS
ENST00000515435.5	CAGE supported TSS
ENST00000333677.7	MANE_select
ENST00000671378.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000309241.10	MANE_select
ENST00000255266.10	MANE_select
ENST00000286298.5	MANE_select
ENST00000433184.1	alternative 5' UTR
ENST00000503336.1	GENCODE experimental pipeline
ENST00000296736.4	MANE_select
ENST00000515406.2	alternative 5' UTR
ENST00000502717.6	MANE_select
ENST00000675795.1	MANE_select
ENST00000261799.9	MANE_select
ENST00000517957.1	alternative 5' UTR
ENST00000231656.13	MANE_select
ENST00000230671.7	MANE_select
ENST00000671881.1	CAGE supported TSS
ENST00000671881.1	LR annotation
ENST00000671881.1	MANE_select
ENST00000672479.1	alternative 5' UTR
ENST00000328668.8	MANE_select
ENST00000509146.1	alternative 5' UTR
ENST00000643257.2	LR annotation
ENST00000643257.2	MANE_select
ENST00000513538.2	GENCODE experimental pipeline
ENST00000427724.7	NAGNAG splice site
ENST00000523836.6	align_id:3715549|asmbl_205714
ENST00000518797.6	align_id:3715551|asmbl_205716
ENST00000524315.6	align_id:3715547|asmbl_205712
ENST00000670307.1	Assembled from SLRseq reads (SRP049776)
ENST00000401695.8	alternative 5' UTR
ENST00000407193.7	MANE_select
ENST00000521466.5	alternative 5' UTR
ENST00000312037.6	alternative 5' UTR
ENST00000642507.1	alternative 5' UTR
ENST00000642507.1	upstream ATG
ENST00000522491.1	alternative 5' UTR
ENST00000519157.1	alternative 5' UTR
ENST00000524161.1	alternative 5' UTR
ENST00000518299.1	alternative 5' UTR
ENST00000518346.1	alternative 5' UTR
ENST00000261797.7	MANE_select
ENST00000522122.1	alternative 5' UTR
ENST00000307662.5	MANE_select
ENST00000665257.1	Assembled from SLRseq reads (SRP049776)
ENST00000517768.6	MANE_select
ENST00000517768.6	alternative 5' UTR
ENST00000199814.9	MANE_select
ENST00000447771.6	non canonical TEC
ENST00000447998.7	MANE_select
ENST00000518015.5	alternative 5' UTR
ENST00000521533.1	alternative 5' UTR
ENST00000526627.2	MANE_select
ENST00000526627.2	upstream ATG
ENST00000648745.1	alternative 5' UTR
ENST00000394226.2	GENCODE experimental pipeline
ENST00000388825.9	MANE_select
ENST00000521591.6	MANE_select
ENST00000521591.6	alternative 5' UTR
ENST00000315050.11	alternative 5' UTR
ENST00000610535.5	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000518977.5	alternative 5' UTR
ENST00000520695.5	alternative 5' UTR
ENST00000521001.1	alternative 5' UTR
ENST00000354546.10	MANE_select
ENST00000523714.5	alternative 5' UTR
ENST00000519644.6	QC splicing correct
ENST00000519644.6	non-canonical splice donor site between exon 5 and 6
ENST00000517677.5	QC splicing correct
ENST00000517677.5	non canonical TEC
ENST00000521749.5	alternative 5' UTR
ENST00000520378.1	not organism-supported
ENST00000523164.1	alternative 5' UTR
ENST00000646541.1	gene LOC102242364 in myotis brandtii
ENST00000355417.7	DKFZP434C171
ENST00000355417.7	MANE_select
ENST00000357164.4	MANE_select
ENST00000335230.8	MANE_select
ENST00000335244.9	MANE_select
ENST00000647906.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000520111.5	alternative 5' UTR
ENST00000520701.5	alternative 5' UTR
ENST00000243389.8	MANE_select
ENST00000517945.5	alternative 5' UTR
ENST00000519829.2	alternative 5' UTR
ENST00000667894.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000231061.9	MANE_select
ENST00000538026.5	alternative 5' UTR
ENST00000539687.5	alternative 5' UTR
ENST00000522348.1	alternative 5' UTR
ENST00000663441.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000313115.11	MANE_select
ENST00000313115.11	genebuild_only_MANE
ENST00000523519.5	alternative 5' UTR
ENST00000520578.6	alternative 5' UTR
ENST00000627077.2	Ensembl_RNAseq_introns
ENST00000627077.2	Snaptron_GTEX
ENST00000627077.2	alternative 5' UTR
ENST00000627077.2	intropolis_filtered
ENST00000678976.1	Snaptron_GTEX
ENST00000678976.1	alternative 5' UTR
ENST00000678976.1	intropolis_filtered
ENST00000677408.1	Snaptron_GTEX
ENST00000677408.1	alternative 5' UTR
ENST00000677408.1	intropolis_filtered
ENST00000678070.1	Ensembl_RNAseq_introns
ENST00000678070.1	Snaptron_GTEX
ENST00000678070.1	alternative 5' UTR
ENST00000678070.1	intropolis_filtered
ENST00000678070.1	pacbio_capture_seq_m150414_074750_42137_c100793412550000001823172010081552_s1_p0_15775_ccs
ENST00000678964.1	long_read_pipeline_2
ENST00000678925.1	SLRseq_align_id:3715789|asmbl_205954
ENST00000678925.1	alternative 5' UTR
ENST00000678925.1	long_read_pipeline_2
ENST00000676978.1	long_read_pipeline_2
ENST00000677757.1	align_id:3715801|asmbl_205966
ENST00000677909.1	Snaptron_GTEX
ENST00000677909.1	intropolis_filtered
ENST00000522761.6	SLR-seq_TB0000032
ENST00000522761.6	alternative 5' UTR
ENST00000676827.1	alternative 5' UTR
ENST00000676827.1	pacbio_capture_seq_m150416_135158_42137_c100793272550000001823172010081556_s1_p0_35010_ccs
ENST00000520177.6	Nanopore_NA12878
ENST00000520177.6	intropolis_filtered
ENST00000676634.1	EST: BG502987.1
ENST00000676634.1	intropolis_filtered
ENST00000677602.1	slr-seq_hsbn_lib7
ENST00000678854.1	EST: BG503151.1
ENST00000676911.1	Snaptron_GTEX
ENST00000676911.1	intropolis_filtered
ENST00000520006.2	Snaptron_GTEX
ENST00000520006.2	alternative 5' UTR
ENST00000520006.2	intropolis_filtered
ENST00000507878.7	EST: BP341955.1
ENST00000676813.1	SLR-seq_HsBN_lib6
ENST00000676813.1	alternative 5' UTR
ENST00000677105.1	alternative 5' UTR
ENST00000677105.1	slr-seq_hsbn_lib9
ENST00000678101.1	SLR-seq_HsBN_lib11
ENST00000678101.1	alternative 5' UTR
ENST00000678910.1	intropolis_filtered
ENST00000678910.1	pacbio_capture_seq_m150425_052025_42137_c100813372550000001823175210081567_s1_p0_84742_ccs
ENST00000356245.8	MANE_select
ENST00000356245.8	alternative 5' UTR
ENST00000678904.1	long_read_pipeline_2
ENST00000677433.1	EST: BJ991454.1
ENST00000678369.1	slr-seq_hsbn_lib7
ENST00000677369.1	alternative 5' UTR
ENST00000677369.1	intropolis_filtered
ENST00000677284.1	alternative 5' UTR
ENST00000677284.1	intropolis_filtered
ENST00000677252.1	Snaptron_GTEX
ENST00000677252.1	intropolis_filtered
ENST00000678564.1	Nanopore_NA12878
ENST00000678564.1	alternative 3' UTR
ENST00000678564.1	intropolis_filtered
ENST00000676894.1	pacbio_capture_seq_m150416_005024_42137_c100793272550000001823172010081553_s1_p0_124433_ccs
ENST00000677923.1	alternative 5' UTR
ENST00000678153.1	intropolis_filtered
ENST00000678209.1	Snaptron_GTEX
ENST00000678209.1	intropolis_filtered
ENST00000678027.1	intropolis_filtered
ENST00000677126.1	intropolis_filtered
ENST00000677146.1	intropolis_filtered
ENST00000679057.1	intropolis_filtered
ENST00000678086.1	Snaptron_GTEX
ENST00000678086.1	intropolis_filtered
ENST00000678750.1	slr-seq_hsbn_lib11
ENST00000678372.1	intropolis_filtered
ENST00000677211.1	intropolis_filtered
ENST00000677687.1	intropolis_filtered
ENST00000676590.1	intropolis_filtered
ENST00000678500.1	intropolis_filtered
ENST00000679135.1	intropolis_filtered
ENST00000679004.1	Snaptron_GTEX
ENST00000679004.1	intropolis_filtered
ENST00000678726.1	Snaptron_GTEX
ENST00000678726.1	intropolis_filtered
ENST00000678194.1	Snaptron_GTEX
ENST00000678194.1	intropolis_filtered
ENST00000679207.1	slr-seq_hsbn_lib8
ENST00000679193.1	slr-seq_hsbn_lib11
ENST00000677854.1	intropolis_filtered
ENST00000678825.1	Snaptron_GTEX
ENST00000678825.1	intropolis_filtered
ENST00000678657.1	EST: BG120591.1
ENST00000678657.1	intropolis_filtered
ENST00000677241.1	EST: DB345836.1
ENST00000677608.1	intropolis_filtered
ENST00000676507.1	intropolis_filtered
ENST00000678612.1	intropolis_filtered
ENST00000677658.1	intropolis_filtered
ENST00000676899.1	Snaptron_GTEX
ENST00000676899.1	intropolis_filtered
ENST00000676715.1	EST: BG776892.1
ENST00000676715.1	Snaptron_GTEX
ENST00000676715.1	intropolis_filtered
ENST00000678295.1	alternative 3' UTR
ENST00000678295.1	intropolis_filtered
ENST00000676878.1	alternative 3' UTR
ENST00000676878.1	intropolis_filtered
ENST00000676734.1	alternative 3' UTR
ENST00000676734.1	intropolis_filtered
ENST00000274576.9	MANE_select
ENST00000524034.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670537.1	Assembled from SLRseq reads (SRP049776)
ENST00000667871.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663460.1	Assembled from SLRseq reads (SRP049776)
ENST00000663819.1	Assembled from SLRseq reads (SRP049776)
ENST00000255262.4	MANE_select
ENST00000659362.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663464.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665191.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653515.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000285900.10	MANE_select
ENST00000521843.6	NP_001244952.1
ENST00000448073.8	NP_001244951.1
ENST00000518783.1	NP_001244950.1
ENST00000351797.9	MANE_select
ENST00000522858.5	alternative 5' UTR
ENST00000520667.5	alternative 5' UTR
ENST00000522395.5	alternative 5' UTR
ENST00000523705.5	alternative 5' UTR
ENST00000519808.5	alternative 5' UTR
ENST00000518102.5	alternative 5' UTR
ENST00000522634.1	alternative 5' UTR
ENST00000517605.1	alternative 5' UTR
ENST00000524246.1	alternative 5' UTR
ENST00000439768.2	NP_001128509.1
ENST00000522782.6	MANE_select
ENST00000522782.6	alternative 5' UTR
ENST00000522177.1	alternative 5' UTR
ENST00000520899.1	alternative 5' UTR
ENST00000679729.1	alternative 5' UTR
ENST00000297107.11	MANE_select
ENST00000657704.1	Assembled from SLRseq reads (SRP049776)
ENST00000297109.11	MANE_select
ENST00000440364.6	NP_001124534.1
ENST00000426761.2	NP_001124535.1
ENST00000231121.3	MANE_select
ENST00000518297.6	MANE_select
ENST00000519931.5	alternative 5' UTR
ENST00000326080.10	MANE_select
ENST00000520461.1	alternative 5' UTR
ENST00000517876.5	alternative 5' UTR
ENST00000520472.5	alternative 5' UTR
ENST00000519211.5	alternative 5' UTR
ENST00000522458.5	alternative 5' UTR
ENST00000522458.5	non canonical TEC
ENST00000522458.5	non-canonical splice donor site at exon 2
ENST00000519903.5	alternative 5' UTR
ENST00000521450.5	alternative 5' UTR
ENST00000403027.6	alternative 5' UTR
ENST00000517568.5	alternative 5' UTR
ENST00000519430.5	alternative 5' UTR
ENST00000520671.5	alternative 5' UTR
ENST00000521583.5	alternative 5' UTR
ENST00000285896.11	MANE_select
ENST00000518028.5	alternative 5' UTR
ENST00000518775.5	alternative 5' UTR
ENST00000521402.1	alternative 5' UTR
ENST00000285873.8	MANE_select
ENST00000523037.6	MANE_select
ENST00000435029.6	MANE_select
ENST00000660390.1	Assembled from SLRseq reads (SRP049776)
ENST00000668848.1	Assembled from SLRseq reads (SRP049776)
ENST00000667906.1	Assembled from SLRseq reads (SRP049776)
ENST00000660436.1	Assembled from SLRseq reads (SRP049776)
ENST00000517913.5	NP_758447
ENST00000337851.9	MANE_select
ENST00000337851.9	NP_000328
ENST00000659143.1	Assembled from SLRseq reads (SRP049776)
ENST00000522232.3	MANE_select
ENST00000274532.7	MANE_select
ENST00000523175.6	MANE_select
ENST00000523175.6	NP_001092884
ENST00000339252.7	NP_036338
ENST00000518745.1	alternative 5' UTR
ENST00000307851.9	MANE_select
ENST00000286317.6	MANE_select
ENST00000524289.1	alternative 5' UTR
ENST00000422843.8	MANE_select
ENST00000302938.4	MANE_select
ENST00000620254.5	MANE_select
ENST00000519499.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000519499.2	TB0000035-DNA_A01-LRAAD-01:Read_139823-Barcode=BC203:length=2052, TB0000035-DNA_A01-LRAAD-01:Read_142804-Barcode=BC207:length=1956, TB0000035-DNA_A01-LRAAD-01:Read_93486-Barcode=BC136:length=2005, TB0000035-DNA_A01-LRAAD-01:Read_269050-Barcode=BC015:length=1445 ;
ENST00000312349.5	MANE_select
ENST00000520782.1	alternative 5' UTR
ENST00000257527.9	MANE_select
ENST00000257527.9	NP_150377
ENST00000435489.7	CAGE supported TSS
ENST00000435489.7	upstream ATG
ENST00000311946.8	CAGE supported TSS
ENST00000311946.8	MANE_select
ENST00000311946.8	upstream ATG
ENST00000265007.11	MANE_select
ENST00000409999.4	MANE_select
ENST00000231198.12	MANE_select
ENST00000286307.6	MANE_select
ENST00000411809.7	MANE_select
ENST00000662826.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668429.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652854.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666344.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000313708.11	MANE_select
ENST00000517335.2	Assembled from SLRseq reads (SRP049776)
ENST00000274542.6	FLJ31951
ENST00000519865.5	NP_001186312.1
ENST00000424310.7	MANE_select
ENST00000424310.7	alternative 5' UTR
ENST00000521606.6	NP_001186310.1
ENST00000518802.5	NP_001186309.1
ENST00000520638.1	NP_001186311.1
ENST00000296786.8	MANE_select
ENST00000648969.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000231228.3	MANE_select
ENST00000658947.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000523311.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653075.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000641205.1	alternative 5' UTR
ENST00000306675.5	CAGE supported TSS
ENST00000306675.5	MANE_select
ENST00000522793.5	alternative 5' UTR
ENST00000231238.10	MANE_select
ENST00000307063.9	MANE_select
ENST00000402432.4	MANE_select
ENST00000257536.13	MANE_select
ENST00000644313.1	alternative 5' UTR
ENST00000644313.1	upstream uORF
ENST00000652664.2	MANE_select
ENST00000652664.2	upstream ATG
ENST00000408953.4	MANE_select
ENST00000523213.1	alternative 5' UTR
ENST00000297151.9	MANE_select
ENST00000521826.5	alternative 5' UTR
ENST00000519349.5	alternative 5' UTR
ENST00000520664.1	alternative 5' UTR
ENST00000352433.10	MANE_select
ENST00000352433.10	alternative 5' UTR
ENST00000520452.5	alternative 5' UTR
ENST00000642502.1	CAGE supported TSS
ENST00000327245.10	MANE_select
ENST00000393959.6	MANE_select
ENST00000675773.1	alternative 5' UTR
ENST00000675081.1	CAGE supported TSS
ENST00000675303.1	alternative 5' UTR
ENST00000675381.1	CAGE supported TSS
ENST00000523730.1	alternative 5' UTR
ENST00000274545.10	MANE_select
ENST00000638112.1	alternative 5' UTR
ENST00000023897.10	alternative 5' UTR
ENST00000635096.1	alternative 5' UTR
ENST00000393943.10	MANE_select
ENST00000393943.10	alternative 5' UTR
ENST00000437025.6	alternative 5' UTR
ENST00000519621.2	alternative 5' UTR
ENST00000636573.1	alternative 5' UTR
ENST00000521339.5	alternative 5' UTR
ENST00000521339.5	upstream ATG
ENST00000637827.1	alternative 5' UTR
ENST00000634335.1	alternative 5' UTR
ENST00000635880.1	alternative 5' UTR
ENST00000625268.2	Assembled from SLRseq reads (SRP049776)
ENST00000639213.2	CAGE supported TSS
ENST00000639213.2	MANE_select
ENST00000638877.1	alternative 3' UTR
ENST00000646143.2	Assembled from SLRseq reads (SRP049776)
ENST00000657260.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000517722.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663711.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660514.1	Assembled from SLRseq reads (SRP049776)
ENST00000512163.5	confirm experimentally
ENST00000510097.5	alternative 5' UTR
ENST00000340828.7	MANE_select
ENST00000511490.4	QC splicing correct
ENST00000511490.4	alternative 5' UTR
ENST00000511490.4	non canonical TEC
ENST00000510664.5	non canonical conserved
ENST00000504553.2	confirm experimentally
ENST00000302764.9	MANE_select
ENST00000520345.5	non canonical TEC
ENST00000522094.5	alternative 5' UTR
ENST00000393915.9	MANE_select
ENST00000393915.9	SW:O75330-3
ENST00000432118.6	NP_001136029
ENST00000321757.11	MANE_select
ENST00000649938.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000670703.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519329.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654428.1	Assembled from SLRseq reads (SRP049776)
ENST00000664809.1	Assembled from SLRseq reads (SRP049776)
ENST00000523704.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671513.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519901.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669047.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662226.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000660218.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662566.1	Assembled from SLRseq reads (SRP049776)
ENST00000664544.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665085.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000519929.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647982.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000670497.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659460.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655559.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000523538.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663122.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665914.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656517.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658983.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655017.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000265293.9	MANE_select
ENST00000231572.8	MANE_select
ENST00000338333.5	MANE_select
ENST00000239231.7	MANE_select
ENST00000519560.6	MANE_select
ENST00000663926.1	Assembled from SLRseq reads (SRP049776)
ENST00000514811.1	GENCODE experimental pipeline
ENST00000511447.5	GENCODE experimental pipeline
ENST00000507092.5	GENCODE experimental pipeline
ENST00000508470.1	GENCODE experimental pipeline
ENST00000506574.5	alternative 5' UTR
ENST00000515224.5	alternative 5' UTR
ENST00000508247.5	alternative 5' UTR
ENST00000265295.9	MANE_select
ENST00000513941.5	alternative 5' UTR
ENST00000513795.1	alternative 5' UTR
ENST00000520908.7	CAGE supported TSS
ENST00000520908.7	LR annotation
ENST00000520908.7	MANE_select
ENST00000522138.1	NMD likely if extended
ENST00000523684.5	CAGE supported TSS
ENST00000519734.5	CAGE supported TSS
ENST00000519734.5	upstream uORF
ENST00000377365.4	MANE_select
ENST00000306268.8	LR annotation
ENST00000306268.8	MANE_select
ENST00000593851.5	MANE_select
ENST00000046794.10	MANE_select
ENST00000653905.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436248.4	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669914.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662473.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655223.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665008.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662612.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000377360.8	NP_001030010
ENST00000328939.9	MANE_select
ENST00000274629.9	MANE_select
ENST00000662627.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000521481.5	alternative 5' UTR
ENST00000521009.5	alternative 5' UTR
ENST00000519196.5	alternative 5' UTR
ENST00000522868.5	alternative 5' UTR
ENST00000518122.5	alternative 5' UTR
ENST00000265294.9	MANE_select
ENST00000265294.9	genebuild_only_MANE
ENST00000523189.6	MANE_select
ENST00000296921.6	MANE_select
ENST00000517671.5	alternative 5' UTR
ENST00000296930.10	MANE_select
ENST00000393820.2	NP_001032827
ENST00000274625.6	MANE_select
ENST00000650062.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000523047.4	MANE_select
ENST00000523047.4	NP_001276899.1
ENST00000517395.6	CAGE supported TSS
ENST00000517395.6	MANE_select
ENST00000176763.10	MANE_select
ENST00000398186.5	MANE_select
ENST00000393792.3	MANE_select
ENST00000311601.6	MANE_select
ENST00000660356.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652199.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000517916.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000369800.6	MANE_select
ENST00000666787.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650258.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000652842.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000239223.4	MANE_select
ENST00000657724.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660336.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000393784.8	MANE_select
ENST00000520326.5	NMD likely if extended
ENST00000667351.1	Assembled from SLRseq reads (SRP049776)
ENST00000519974.5	alternative 5' UTR
ENST00000521476.5	alternative 5' UTR
ENST00000265100.6	MANE_select
ENST00000519239.5	alternative 5' UTR
ENST00000519522.1	alternative 5' UTR
ENST00000519156.1	alternative 5' UTR
ENST00000519374.6	MANE_select
ENST00000517669.1	alternative 3' UTR
ENST00000296953.6	MANE_select
ENST00000520420.5	alternative 5' UTR
ENST00000523161.1	alternative 5' UTR
ENST00000351486.10	MANE_select
ENST00000329198.5	MANE_select
ENST00000265087.9	MANE_select
ENST00000663262.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655905.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657357.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667613.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654783.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519400.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662094.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663273.1	Assembled from SLRseq reads (SRP049776)
ENST00000653394.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659572.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000311086.9	MANE_select
ENST00000669001.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669001.1	Assembled from SLRseq reads (SRP049776)
ENST00000664033.1	Assembled from SLRseq reads (SRP049776)
ENST00000669486.1	Assembled from SLRseq reads (SRP049776)
ENST00000665162.1	Assembled from SLRseq reads (SRP049776)
ENST00000668825.1	Assembled from SLRseq reads (SRP049776)
ENST00000518902.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654172.1	Assembled from SLRseq reads (SRP049776)
ENST00000671054.1	Assembled from SLRseq reads (SRP049776)
ENST00000653465.1	Assembled from SLRseq reads (SRP049776)
ENST00000523617.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659366.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662807.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000265085.10	MANE_select
ENST00000340147.7	MANE_select
ENST00000303177.8	MANE_select
ENST00000519867.5	alternative 5' UTR
ENST00000521278.5	alternative 5' UTR
ENST00000519717.1	alternative 5' UTR
ENST00000649707.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000664184.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000239243.7	MANE_select
ENST00000510150.1	GENCODE experimental pipeline
ENST00000393752.3	MANE_select
ENST00000660847.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000507017.5	alternative 5' UTR
ENST00000321442.10	MANE_select
ENST00000506963.1	alternative 5' UTR
ENST00000515502.1	alternative 5' UTR
ENST00000509837.5	alternative 5' UTR
ENST00000512824.5	alternative 5' UTR
ENST00000393745.8	MANE_select
ENST00000393745.8	alternative 5' UTR
ENST00000514150.5	alternative 5' UTR
ENST00000502265.5	alternative 5' UTR
ENST00000515025.5	alternative 5' UTR
ENST00000515094.1	alternative 5' UTR
ENST00000265097.9	MANE_select
ENST00000658714.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671485.1	Assembled from SLRseq reads (SRP049776)
ENST00000510151.5	not best-in-genome evidence
ENST00000512862.5	not best-in-genome evidence
ENST00000515817.5	not best-in-genome evidence
ENST00000656489.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000663646.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654801.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658968.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000443967.5	FLJ44216
ENST00000429602.7	MANE_select
ENST00000429602.7	genebuild_only_MANE
ENST00000514128.1	non canonical TEC
ENST00000514128.1	non-canonical splice site between exons 1 and 2
ENST00000298569.9	KIAA1191
ENST00000298569.9	MANE_select
ENST00000510164.5	alternative 5' UTR
ENST00000506983.5	alternative 5' UTR
ENST00000310389.6	MANE_select
ENST00000614830.5	MANE_select
ENST00000621444.4	GENCODE experimental pipeline
ENST00000621444.4	NP_001243469.2
ENST00000616685.1	GENCODE experimental pipeline
ENST00000274787.3	MANE_select
ENST00000310418.9	MANE_select
ENST00000261942.7	MANE_select
ENST00000274811.9	MANE_select
ENST00000261944.9	alternative 5' UTR
ENST00000303991.5	KIAA1893
ENST00000303991.5	MANE_select
ENST00000393693.7	MANE_select
ENST00000393693.7	alternative 5' UTR
ENST00000506696.1	alternative 5' UTR
ENST00000647833.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000318682.11	MANE_select
ENST00000318682.11	genebuild_only_MANE
ENST00000510660.5	alternative 5' UTR
ENST00000504597.5	non canonical conserved
ENST00000508164.6	MANE_select
ENST00000504168.5	GENCODE experimental pipeline
ENST00000503045.5	GENCODE experimental pipeline
ENST00000507236.1	GENCODE experimental pipeline
ENST00000509580.2	GENCODE experimental pipeline
ENST00000329542.9	MANE_select
ENST00000292432.10	MANE_select
ENST00000511320.6	MANE_select
ENST00000511320.6	alternative 5' UTR
ENST00000506128.5	non canonical TEC
ENST00000512031.5	alternative 5' UTR
ENST00000509236.5	alternative 5' UTR
ENST00000507513.1	alternative 5' UTR
ENST00000428382.2	alternative 5' UTR
ENST00000506693.5	GENCODE experimental pipeline
ENST00000358149.8	MANE_select
ENST00000503425.5	GENCODE experimental pipeline
ENST00000503708.5	alternative 5' UTR
ENST00000393648.6	alternative 5' UTR
ENST00000514472.1	alternative 5' UTR
ENST00000502906.5	alternative 5' UTR
ENST00000292408.9	MANE_select
ENST00000510911.5	alternative 5' UTR
ENST00000507708.1	alternative 5' UTR
ENST00000513166.1	alternative 5' UTR
ENST00000510954.5	alternative 5' UTR
ENST00000508896.5	alternative 5' UTR
ENST00000439151.7	MANE_select
ENST00000508029.5	GENCODE experimental pipeline
ENST00000503056.5	GENCODE experimental pipeline
ENST00000504457.5	GENCODE experimental pipeline
ENST00000505395.5	GENCODE experimental pipeline
ENST00000657928.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000303251.11	MANE_select
ENST00000393611.6	alternative 5' UTR
ENST00000504395.1	alternative 5' UTR
ENST00000513063.5	alternative 5' UTR
ENST00000303204.9	MANE_select
ENST00000303127.12	MANE_select
ENST00000515209.5	GENCODE experimental pipeline
ENST00000408923.8	MANE_select
ENST00000504577.5	alternative 5' UTR
ENST00000512593.5	GENCODE experimental pipeline
ENST00000324417.6	MANE_select
ENST00000358571.3	MANE_select
ENST00000253496.4	MANE_select
ENST00000355472.10	MANE_select
ENST00000528793.5	non canonical TEC
ENST00000528793.5	non-canonical splice acceptor sites between exons 15 and 16
ENST00000507881.5	alternative 5' UTR
ENST00000323249.8	MANE_select
ENST00000502922.5	alternative 5' UTR
ENST00000510492.1	alternative 5' UTR
ENST00000393565.5	GENCODE experimental pipeline
ENST00000393565.5	Made from rat and mouse cDNAs
ENST00000514833.1	alternative 5' UTR
ENST00000355841.7	MANE_select
ENST00000506161.5	alternative 5' UTR
ENST00000506537.1	alternative 5' UTR
ENST00000510898.7	MANE_select
ENST00000510898.7	alternative 5' UTR
ENST00000510380.5	alternative 5' UTR
ENST00000506493.5	alternative 5' UTR
ENST00000502885.5	alternative 5' UTR
ENST00000509310.1	alternative 5' UTR
ENST00000510389.1	alternative 5' UTR
ENST00000330503.12	CAGE supported TSS
ENST00000330503.12	LR annotation
ENST00000330503.12	MANE_select
ENST00000514747.6	MANE_select
ENST00000332598.7	MANE_select
ENST00000029410.10	MANE_select
ENST00000507061.1	GENCODE experimental pipeline
ENST00000665249.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656340.1	Assembled from SLRseq reads (SRP049776)
ENST00000667415.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659722.1	Assembled from SLRseq reads (SRP049776)
ENST00000308304.2	MANE_select
ENST00000652706.2	Assembled from SLRseq reads (SRP049776)
ENST00000511189.3	Assembled from SLRseq reads (SRP049776)
ENST00000661980.1	Assembled from SLRseq reads (SRP049776)
ENST00000651840.2	Assembled from SLRseq reads (SRP049776)
ENST00000652338.2	Assembled from SLRseq reads (SRP049776)
ENST00000652181.2	Assembled from SLRseq reads (SRP049776)
ENST00000651969.2	Assembled from SLRseq reads (SRP049776)
ENST00000651447.2	Assembled from SLRseq reads (SRP049776)
ENST00000652571.2	Assembled from SLRseq reads (SRP049776)
ENST00000669380.1	Assembled from SLRseq reads (SRP049776)
ENST00000652262.2	Assembled from SLRseq reads (SRP049776)
ENST00000662167.1	Assembled from SLRseq reads (SRP049776)
ENST00000651248.2	Assembled from SLRseq reads (SRP049776)
ENST00000652760.2	Assembled from SLRseq reads (SRP049776)
ENST00000651496.2	Assembled from SLRseq reads (SRP049776)
ENST00000651413.2	Assembled from SLRseq reads (SRP049776)
ENST00000650901.1	alternative 3' UTR
ENST00000650901.1	alternative 5' UTR
ENST00000668044.1	Assembled from SLRseq reads (SRP049776)
ENST00000663123.1	Assembled from SLRseq reads (SRP049776)
ENST00000651697.2	Assembled from SLRseq reads (SRP049776)
ENST00000652694.2	Assembled from SLRseq reads (SRP049776)
ENST00000651417.2	Assembled from SLRseq reads (SRP049776)
ENST00000667131.1	Assembled from SLRseq reads (SRP049776)
ENST00000663505.1	Assembled from SLRseq reads (SRP049776)
ENST00000651398.2	Assembled from SLRseq reads (SRP049776)
ENST00000652464.2	Assembled from SLRseq reads (SRP049776)
ENST00000274605.6	MANE_select
ENST00000515098.5	alternative 5' UTR
ENST00000502814.5	alternative 5' UTR
ENST00000313386.9	FLJ22318
ENST00000313386.9	MANE_select
ENST00000507457.5	alternative 5' UTR
ENST00000508647.5	alternative 5' UTR
ENST00000274606.8	MANE_select
ENST00000314397.8	NP_001030005
ENST00000463439.3	MANE_select
ENST00000358344.8	MANE_select
ENST00000506259.5	alternative 5' UTR
ENST00000504898.5	alternative 5' UTR
ENST00000308158.10	MANE_select
ENST00000308158.10	MGC15875
ENST00000476170.2	GENCODE experimental pipeline
ENST00000681261.1	EnsCodingFragment|3P|XLOC_057596|TCONS_00230069:0.14492
ENST00000681261.1	upstream ATG
ENST00000679896.1	EnsCodingFragment|3P|XLOC_057596|TCONS_00230070:0.430724
ENST00000679896.1	PLAR_transcripts
ENST00000680268.1	EnsCodingFragment|3P|XLOC_057596|TCONS_00230072:0.676767
ENST00000680889.1	EnsCodingFragment|3P|XLOC_057596|TCONS_00230073:7.55298
ENST00000680889.1	PLAR_transcripts
ENST00000407622.3	EnsCodingFragment|3P|XLOC_057596|TCONS_00230074:0.171296
ENST00000390654.8	MANE_select
ENST00000679888.1	align_id:3717724|asmbl_207889
ENST00000484750.1	GENCODE experimental pipeline
ENST00000316308.9	MANE_select
ENST00000671317.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000335815.7	MANE_select
ENST00000520331.5	alternative 5' UTR
ENST00000322434.8	MANE_select
ENST00000520377.1	alternative 5' UTR
ENST00000520660.5	alternative 5' UTR
ENST00000361362.7	MANE_select
ENST00000520805.5	alternative 5' UTR
ENST00000520301.5	alternative 5' UTR
ENST00000523286.1	alternative 5' UTR
ENST00000519564.2	MANE_select
ENST00000519564.2	alternative 5' UTR
ENST00000517717.3	CAGE supported TSS
ENST00000517717.3	LR annotation
ENST00000517717.3	MANE_select
ENST00000522442.1	alternative 5' UTR
ENST00000444149.7	MANE_select
ENST00000444149.7	NP_001129588
ENST00000521285.1	alternative 5' UTR
ENST00000315475.7	MANE_select
ENST00000251582.12	MANE_select
ENST00000518335.3	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000319449.9	MANE_select
ENST00000393438.6	alternative 5' UTR
ENST00000503514.1	GENCODE experimental pipeline
ENST00000502434.1	GENCODE experimental pipeline
ENST00000442819.6	alternative 5' UTR
ENST00000356731.9	alternative 5' UTR
ENST00000503105.5	GENCODE experimental pipeline
ENST00000504779.6	alternative 5' UTR
ENST00000505811.5	alternative 5' UTR
ENST00000504348.5	alternative 5' UTR
ENST00000513225.5	alternative 5' UTR
ENST00000515158.5	alternative 5' UTR
ENST00000521116.5	alternative 5' UTR
ENST00000515714.5	alternative 5' UTR
ENST00000503664.1	alternative 5' UTR
ENST00000513230.1	alternative 5' UTR
ENST00000522256.1	alternative 5' UTR
ENST00000508188.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661598.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000376974.5	MANE_select
ENST00000681674.1	align_id:3718008|asmbl_208173
ENST00000681674.1	alternative 5' UTR
ENST00000681712.1	align_id:3718015|asmbl_208180
ENST00000681712.1	alternative 5' UTR
ENST00000681903.1	align_id:3718009|asmbl_208174
ENST00000680406.1	NAGNAG splice site
ENST00000680406.1	align_id:3718045|asmbl_208210
ENST00000502296.6	align_id:1360874|asmbl_80777
ENST00000502296.6	alternative 5' UTR
ENST00000504734.5	alternative 5' UTR
ENST00000452673.6	alternative 5' UTR
ENST00000680614.1	align_id:3718039|asmbl_208204
ENST00000680504.1	align_id:3718043|asmbl_208208
ENST00000681265.1	align_id:3718042|asmbl_208207
ENST00000680894.1	align_id:3718038|asmbl_208203
ENST00000681894.1	align_id:3718036|asmbl_208201
ENST00000679395.1	align_id:3718037|asmbl_208202
ENST00000681504.1	align_id:3718032|asmbl_208197
ENST00000679642.1	align_id:3718034|asmbl_208199
ENST00000679719.1	align_id:3718030|asmbl_208195
ENST00000679523.1	align_id:3718031|asmbl_208196
ENST00000680985.1	align_id:3718024|asmbl_208189
ENST00000680837.1	align_id:3718026|asmbl_208191
ENST00000680827.1	align_id:3718022|asmbl_208187
ENST00000681576.1	align_id:3718025|asmbl_208190
ENST00000680984.1	GENCODE experimental pipeline
ENST00000680984.1	align_id:3718028|asmbl_208193
ENST00000680042.1	align_id:3718010|asmbl_208175
ENST00000681762.1	align_id:3718029|asmbl_208194
ENST00000502498.6	align_id:3718046|asmbl_208211
ENST00000681476.1	align_id:3718013|asmbl_208178
ENST00000681476.1	alternative 5' UTR
ENST00000681072.1	align_id:3718011|asmbl_208176
ENST00000681072.1	alternative 5' UTR
ENST00000247461.9	MANE_select
ENST00000502673.6	alternative 5' UTR
ENST00000502673.6	compmerge.5282.pooled.chr5
ENST00000513246.6	alternative 5' UTR
ENST00000680618.1	align_id:3718016|asmbl_208181
ENST00000680618.1	alternative 5' UTR
ENST00000680092.1	align_id:3718017|asmbl_208182
ENST00000681733.1	align_id:3718012|asmbl_208177
ENST00000679471.1	align_id:3718018|asmbl_208183
ENST00000679527.1	align_id:3718040|asmbl_208205
ENST00000680006.1	align_id:3718019|asmbl_208184
ENST00000681398.1	align_id:3718023|asmbl_208188
ENST00000681431.1	align_id:3718021|asmbl_208186
ENST00000680013.1	align_id:3718007|asmbl_208172
ENST00000681076.1	align_id:3718044|asmbl_208209
ENST00000681168.1	align_id:3718014|asmbl_208179
ENST00000509563.2	alternative 5' UTR
ENST00000681342.1	align_id:3718027|asmbl_208192
ENST00000292599.4	MANE_select
ENST00000292596.15	MANE_select
ENST00000401985.3	GENCODE experimental pipeline
ENST00000292591.12	MANE_select
ENST00000514093.5	alternative 5' UTR
ENST00000422245.5	alternative 5' UTR
ENST00000453046.5	alternative 5' UTR
ENST00000389805.9	MANE_select
ENST00000510187.5	GENCODE experimental pipeline
ENST00000292586.11	MANE_select
ENST00000499601.2	GENCODE experimental pipeline
ENST00000355235.8	MANE_select
ENST00000524222.2	non canonical TEC
ENST00000521389.6	MANE_select
ENST00000520911.5	non canonical TEC
ENST00000510240.1	GENCODE experimental pipeline
ENST00000624942.1	confirm experimentally
ENST00000361132.9	MANE_select
ENST00000393371.6	alternative 5' UTR
ENST00000452135.7	MANE_select
ENST00000523583.1	alternative 5' UTR
ENST00000504573.1	GENCODE experimental pipeline
ENST00000253778.13	MANE_select
ENST00000662761.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000507681.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000261951.9	MANE_select
ENST00000502447.1	alternative 5' UTR
ENST00000292641.4	MANE_select
ENST00000261937.11	MANE_select
ENST00000513535.1	GENCODE experimental pipeline
ENST00000307826.5	MANE_select
ENST00000307826.5	alternative 5' UTR
ENST00000446023.6	alternative 5' UTR
ENST00000427865.2	alternative 5' UTR
ENST00000504671.1	alternative 5' UTR
ENST00000506889.1	alternative 5' UTR
ENST00000514283.1	alternative 5' UTR
ENST00000512695.1	alternative 5' UTR
ENST00000506269.1	alternative 5' UTR
ENST00000514438.1	alternative 5' UTR
ENST00000502678.1	alternative 5' UTR
ENST00000513431.5	alternative 5' UTR
ENST00000507384.1	alternative 5' UTR
ENST00000514760.1	GENCODE experimental pipeline
ENST00000512080.1	GENCODE experimental pipeline
ENST00000510341.1	GENCODE experimental pipeline
ENST00000508702.1	GENCODE experimental pipeline
ENST00000510962.1	GENCODE experimental pipeline
ENST00000508090.1	GENCODE experimental pipeline
ENST00000506708.1	GENCODE experimental pipeline
ENST00000658025.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654313.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660674.1	Assembled from SLRseq reads (SRP049776)
ENST00000653411.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000509921.2	Assembled from SLRseq reads (SRP049776)
ENST00000509921.2	GENCODE experimental pipeline
ENST00000508309.2	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000661444.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661444.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000665473.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659553.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659497.1	Assembled from SLRseq reads (SRP049776)
ENST00000657229.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662722.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000667360.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000661298.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000661810.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658585.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653584.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000502412.2	MANE_select
ENST00000512132.5	NP_689496.4
ENST00000504225.1	alternative 5' UTR
ENST00000506439.5	alternative 5' UTR
ENST00000509066.1	alternative 5' UTR
ENST00000340184.9	MANE_select
ENST00000511704.5	GENCODE experimental pipeline
ENST00000342868.7	MANE_select
ENST00000515271.1	GENCODE experimental pipeline
ENST00000327705.14	MANE_select
ENST00000641318.1	ENA ID EGAS00001001486
ENST00000641318.1	alternative 5' UTR
ENST00000641367.1	ENA ID EGAS00001001486
ENST00000642036.1	ENA ID EGAS00001001486
ENST00000641551.1	ENA ID EGAS00001001486
ENST00000641551.1	MANE_select
ENST00000641551.1	alternative 5' UTR
ENST00000641492.1	ENA ID EGAS00001001486
ENST00000641492.1	MANE_select
ENST00000641791.1	ENA ID EGAS00001001486
ENST00000641791.1	alternative 5' UTR
ENST00000658296.1	Assembled from SLRseq reads (SRP049776)
ENST00000655600.1	Assembled from SLRseq reads (SRP049776)
ENST00000664992.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000508877.1	GENCODE experimental pipeline
ENST00000274773.12	MANE_select
ENST00000503314.1	GENCODE experimental pipeline
ENST00000668115.1	Assembled from SLRseq reads (SRP049776)
ENST00000315073.10	MANE_select
ENST00000512805.6	MANE_select
ENST00000512805.6	non canonical conserved
ENST00000512805.6	non-canonical splice donor site between exons 2 and 3
ENST00000511473.5	non-canonical splice donor site between exons 2 and 3
ENST00000502905.5	non-canonical splice donor site between exons 2 and 3
ENST00000511566.5	GENCODE experimental pipeline
ENST00000511566.5	non-canonical splice donor site between exons 2 and 3
ENST00000509535.5	GENCODE experimental pipeline
ENST00000504128.5	GENCODE experimental pipeline
ENST00000508682.5	non-canonical splice donor site between exons 2 and 3
ENST00000376817.8	non canonical conserved
ENST00000376817.8	non-canonical splice donor site between exons 2 and 3
ENST00000504726.1	GENCODE experimental pipeline
ENST00000511900.5	GENCODE experimental pipeline
ENST00000512968.5	non-canonical splice donor site between exons 2 and 3
ENST00000510199.5	non-canonical splice donor site between exons 2 and 3
ENST00000502844.5	non-canonical splice donor site between exons 2 and 3
ENST00000507000.5	GENCODE experimental pipeline
ENST00000507000.5	non-canonical splice donor site between exons 2 and 3
ENST00000514183.5	non-canonical splice donor site between exons 2 and 3
ENST00000502548.5	non-canonical splice donor site between exons 2 and 3
ENST00000503494.5	non-canonical splice donor site between exons 2 and 3
ENST00000513027.3	ggc splice donor site between splice sites 2 and 3
ENST00000505461.5	non canonical conserved
ENST00000505461.5	non-canonical splice donor site between exons 2 and 3
ENST00000508963.1	non-canonical splice donor site between exons 2 and 3
ENST00000506340.2	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000513146.1	GENCODE experimental pipeline
ENST00000510796.1	GENCODE experimental pipeline
ENST00000657194.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000509252.1	GENCODE experimental pipeline
ENST00000433265.3	GENCODE experimental pipeline
ENST00000666061.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000412295.2	GENCODE experimental pipeline
ENST00000499986.8	non canonical TEC
ENST00000499986.8	not best-in-genome evidence
ENST00000604669.5	not best-in-genome evidence
ENST00000604354.1	not best-in-genome evidence
ENST00000509192.5	not best-in-genome evidence
ENST00000580119.2	FLJ40227
ENST00000580119.2	LOC285766
ENST00000661946.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648409.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000665870.1	Assembled from SLRseq reads (SRP049776)
ENST00000603005.5	NMD likely if extended
ENST00000468485.5	interferon regulatory factor 4
ENST00000380956.9	MANE_select
ENST00000493114.1	Continued_from bA328C17.2.5 in Em:AL365272
ENST00000493114.1	interferon regulatory factor 4
ENST00000493114.1	interferon regulatory factor 4 variant 5
ENST00000661640.1	Assembled from SLRseq reads (SRP049776)
ENST00000230449.9	MANE_select
ENST00000230449.9	mammalian exocyst complex subunit (Sec5) (FLJ11026)
ENST00000230449.9	mammalian exocyst complex subunit (Sec5)(FLJ11026)
ENST00000443083.5	mammalian exocyst complex subunit (Sec5) (FLJ11026)
ENST00000430842.1	putative novel transcript
ENST00000380907.2	novel protein similar to HUS1 checkpoint homolog (S. pombe)
ENST00000658207.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669167.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655063.1	Assembled from SLRseq reads (SRP049776)
ENST00000607084.1	non canonical TEC
ENST00000655659.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655659.1	putative novel transcript
ENST00000612554.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662378.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669177.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664781.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668813.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000661526.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663447.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000660745.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000296839.5	MANE_select
ENST00000296839.5	winged helix/forkhead transcription factor (HFH1)
ENST00000645481.2	LR annotation
ENST00000645481.2	MANE_select
ENST00000652712.1	CAGE supported TSS
ENST00000645831.2	LR annotation
ENST00000645831.2	MANE_select
ENST00000476972.6	GDP-mannose 4,6-dehydratase
ENST00000467288.6	GDP-mannose 4,6-dehydratase
ENST00000486793.5	GDP-mannose 4,6-dehydratase
ENST00000380815.5	GDP-D-mannose-4,6-dehydratase
ENST00000380815.5	GDP-mannose 4,6-dehydratase
ENST00000380815.5	MANE_select
ENST00000380805.6	GDP-mannose 4,6-dehydratase
ENST00000650019.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000657072.1	Assembled from SLRseq reads (SRP049776)
ENST00000529893.6	Assembled from SLRseq reads (SRP049776)
ENST00000664738.1	Assembled from SLRseq reads (SRP049776)
ENST00000660978.1	Assembled from SLRseq reads (SRP049776)
ENST00000659643.1	Assembled from SLRseq reads (SRP049776)
ENST00000659523.1	Assembled from SLRseq reads (SRP049776)
ENST00000532124.6	Assembled from SLRseq reads (SRP049776)
ENST00000663428.1	Assembled from SLRseq reads (SRP049776)
ENST00000660533.1	Assembled from SLRseq reads (SRP049776)
ENST00000670895.1	Assembled from SLRseq reads (SRP049776)
ENST00000654526.1	Assembled from SLRseq reads (SRP049776)
ENST00000531092.6	Assembled from SLRseq reads (SRP049776)
ENST00000524770.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000524770.6	Assembled from SLRseq reads (SRP049776)
ENST00000657589.1	Assembled from SLRseq reads (SRP049776)
ENST00000607519.2	Assembled from SLRseq reads (SRP049776)
ENST00000530833.6	Assembled from SLRseq reads (SRP049776)
ENST00000530346.6	Assembled from SLRseq reads (SRP049776)
ENST00000662000.1	Assembled from SLRseq reads (SRP049776)
ENST00000665610.1	Assembled from SLRseq reads (SRP049776)
ENST00000532564.7	Assembled from SLRseq reads (SRP049776)
ENST00000654970.1	Assembled from SLRseq reads (SRP049776)
ENST00000666817.1	Assembled from SLRseq reads (SRP049776)
ENST00000655727.1	Assembled from SLRseq reads (SRP049776)
ENST00000657544.1	Assembled from SLRseq reads (SRP049776)
ENST00000657396.1	Assembled from SLRseq reads (SRP049776)
ENST00000656364.1	Assembled from SLRseq reads (SRP049776)
ENST00000440848.2	novel transcript
ENST00000624527.3	Assembled from SLRseq reads (SRP049776)
ENST00000624527.3	novel protein (FLJ31934)
ENST00000666762.1	Assembled from SLRseq reads (SRP049776)
ENST00000670876.1	Assembled from SLRseq reads (SRP049776)
ENST00000653895.1	Assembled from SLRseq reads (SRP049776)
ENST00000274643.9	MANE_select
ENST00000274643.9	novel protein similar to myosin light chain kinase
ENST00000380773.9	MANE_select
ENST00000380773.9	werner helicase interacting protein (WHIP) (RUVBL helicase)
ENST00000380771.8	werner helicase interacting protein (WHIP) (RUVBL helicase)
ENST00000380769.8	werner helicase interacting protein (WHIP) (RUVBL helicase)
ENST00000380764.1	werner helicase interacting protein (WHIP) (RUVBL helicase)
ENST00000380739.6	MANE_select
ENST00000380739.6	serine (or cysteine) proteinase inhibitor, clade B (ovalbumin) member 1 (EI, LEI, PI2, M/NEI, ELANH2, protease inhibitor 2 (anti-elastase) monocyte/neutrophil derived)
ENST00000468511.5	serine (or cysteine) proteinase inhibitor, clade B (ovalbumin) member 1 (EI, LEI, PI2, M/NEI, ELANH2, protease inhibitor 2 (anti-elastase) monocyte/neutrophil derived)
ENST00000468511.5	this transcript variant and variant .3.4 could be part of a single alternate transcript
ENST00000490094.5	serine (or cysteine) proteinase inhibitor, clade B (ovalbumin) member 1 (EI, LEI, PI2, M/NEI, ELANH2, protease inhibitor 2 (anti-elastase) monocyte/neutrophil derived)
ENST00000476896.5	serine (or cysteine) proteinase inhibitor, clade B (ovalbumin) member 1 (EI, LEI, PI2, M/NEI, ELANH2, protease inhibitor 2 (anti-elastase) monocyte/neutrophil derived)
ENST00000460260.1	serine (or cysteine) proteinase inhibitor, clade B (ovalbumin) member 1 (EI, LEI, PI2, M/NEI, ELANH2, protease inhibitor 2 (anti-elastase) monocyte/neutrophil derived)
ENST00000460260.1	this transcript variant and variants .3.5 could be part of a single alternate transcript
ENST00000661223.1	Assembled from SLRseq reads (SRP049776)
ENST00000654948.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654948.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000670540.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665261.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668503.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668503.1	novel transcript
ENST00000668503.1	putative novel transcript
ENST00000667461.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000545177.5	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420981.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670827.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000380698.5	MANE_select
ENST00000380698.5	serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 9 (CAP3, P19, protease inhibitor 9)
ENST00000437718.1	putative novel transcript
ENST00000643314.1	serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 6 (CAP, PI6, PTI, protease inhibitor 6)
ENST00000643314.1	transcript variants .1 to .6 differ by alternate splicing in the 5' UTR
ENST00000380524.5	alternative 5' UTR
ENST00000380524.5	serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 6 (CAP, PI6, PTI, protease inhibitor 6)
ENST00000380524.5	variants .1 to .6 differ by alternate splicing in the 5' UTR
ENST00000380529.5	alternative 5' UTR
ENST00000380529.5	serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 6 (CAP, PI6, PTI, protease inhibitor 6)
ENST00000380529.5	transcript variants .1 to .6 differ by alternate splicing in the 5' UTR
ENST00000380539.7	LR annotation
ENST00000380539.7	MANE_select
ENST00000380546.7	alternative 5' UTR
ENST00000380546.7	serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 6 (CAP, PI6, PTI, protease inhibitor 6)
ENST00000380546.7	transcript variants .1 to .6 differ by alternate splicing in the 5' UTR
ENST00000643098.1	alternative 5' UTR
ENST00000643098.1	serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 6 (CAP, PI6, PTI, protease inhibitor 6)
ENST00000643098.1	transcript variants .1 to .6 differ by alternate splicing in the 5' UTR
ENST00000649845.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000644178.1	alternative 5' UTR
ENST00000644178.1	upstream ATG
ENST00000644388.1	alternative 5' UTR
ENST00000380520.6	alternative 5' UTR
ENST00000645580.1	alternative 5' UTR
ENST00000643227.1	alternative 5' UTR
ENST00000645421.1	alternative 5' UTR
ENST00000646688.1	alternative 5' UTR
ENST00000644777.1	alternative 5' UTR
ENST00000644777.1	upstream ATG
ENST00000644875.1	alternative 5' UTR
ENST00000397717.7	NAD(P)H dehydrogenase, quinone 2 (NMOR2, QR2, DHQV, NAD(P)H menadione oxidoreductase 2 dioxin-inducible, NAD(P)H menadione oxidoreductase-1 dioxin-inducible 2)
ENST00000397717.7	alternative 5' UTR
ENST00000380455.11	MANE_select
ENST00000338130.7	NAD(P)H dehydrogenase, quinone 2 (NMOR2, QR2, DHQV, NAD(P)H menadione oxidoreductase 2 dioxin-inducible, NAD(P)H menadione oxidoreductase-1 dioxin-inducible 2)
ENST00000338130.7	transcript variants .1, .2 and .6 differ by alternate splicing in the 5' UTR
ENST00000380441.5	NAD(P)H dehydrogenase, quinone 2 (NMOR2, QR2, DHQV, NAD(P)H menadione oxidoreductase 2 dioxin-inducible, NAD(P)H menadione oxidoreductase-1 dioxin-inducible 2)
ENST00000380441.5	missing exon 3; differs from transcript variant .5 by alternate splicing in the 5' UTR
ENST00000380454.8	NAD(P)H dehydrogenase, quinone 2 (NMOR2, QR2, DHQV, NAD(P)H menadione oxidoreductase 2 dioxin-inducible, NAD(P)H menadione oxidoreductase-1 dioxin-inducible 2)
ENST00000380454.8	missing exon 3; differs from transcript variant .3 by alternate splicing in the 5' UTR
ENST00000380430.6	NAD(P)H dehydrogenase, quinone 2 (NMOR2, QR2, DHQV, NAD(P)H menadione oxidoreductase 2 dioxin-inducible, NAD(P)H menadione oxidoreductase-1 dioxin-inducible 2)
ENST00000380430.6	transcript variants .1, .2 and .6 differ by alternate splicing in the 5' UTR
ENST00000606474.1	NMD likely if extended
ENST00000658240.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660868.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456189.2	putative novel transcript
ENST00000429319.1	putative novel transcript
ENST00000665347.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000675225.1	LOC101927759
ENST00000433761.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000678874.1	align_id:3718596|asmbl_208761
ENST00000380409.3	align_id:3718599|asmbl_208764
ENST00000677261.1	align_id:3718688|asmbl_208853
ENST00000677799.1	align_id:3718593|asmbl_208758
ENST00000676758.1	align_id:3718598|asmbl_208763
ENST00000676995.1	align_id:3718668|asmbl_208833
ENST00000479389.1	receptor (TNFRSF)-interacting serine-threonine kinase 1 (RIP)
ENST00000676591.1	align_id:3718592|asmbl_208757
ENST00000259808.9	MANE_select
ENST00000259808.9	receptor (TNFRSF)-interacting serine-threonine kinase 1 (RIP)
ENST00000676618.1	align_id:3718679|asmbl_208844
ENST00000677361.1	align_id:3718594|asmbl_208759
ENST00000676965.1	long_read_pipeline_2
ENST00000680389.1	long_read_pipeline_2
ENST00000679775.1	align_id:3718687|asmbl_208852
ENST00000679335.1	long_read_pipeline_2
ENST00000679677.1	align_id:3718633|asmbl_208798
ENST00000679677.1	long_read_pipeline_2
ENST00000380379.10	MANE_select
ENST00000464040.1	confirm experimentally
ENST00000333628.4	MANE_select
ENST00000333628.4	novel protein similar to tubulin beta polypeptide (TUBB)
ENST00000489942.1	novel transcript
ENST00000435043.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435043.3	putative novel transcript
ENST00000656983.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425384.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425384.7	QC splicing correct
ENST00000425384.7	putative novel transcript
ENST00000259818.8	MANE_select
ENST00000259818.8	novel protein similar to tubulin beta polypeptide (TUBB)
ENST00000473006.1	novel transcript
ENST00000438998.7	MANE_select
ENST00000419065.6	NP_001122064.1
ENST00000473000.2	NP_001129222.1
ENST00000406686.8	MANE_select
ENST00000380302.8	alternative 5' UTR
ENST00000380298.2	269349  268754
ENST00000665760.1	Assembled from SLRseq reads (SRP049776)
ENST00000658658.1	Assembled from SLRseq reads (SRP049776)
ENST00000668915.1	Assembled from SLRseq reads (SRP049776)
ENST00000662974.1	Assembled from SLRseq reads (SRP049776)
ENST00000668020.1	Assembled from SLRseq reads (SRP049776)
ENST00000661196.1	Assembled from SLRseq reads (SRP049776)
ENST00000669421.1	Assembled from SLRseq reads (SRP049776)
ENST00000666680.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653557.1	Assembled from SLRseq reads (SRP049776)
ENST00000660734.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655328.1	Assembled from SLRseq reads (SRP049776)
ENST00000659450.1	Assembled from SLRseq reads (SRP049776)
ENST00000660471.1	Assembled from SLRseq reads (SRP049776)
ENST00000661070.1	Assembled from SLRseq reads (SRP049776)
ENST00000670704.1	Assembled from SLRseq reads (SRP049776)
ENST00000667255.1	Assembled from SLRseq reads (SRP049776)
ENST00000661016.1	Assembled from SLRseq reads (SRP049776)
ENST00000669021.1	Assembled from SLRseq reads (SRP049776)
ENST00000667691.1	Assembled from SLRseq reads (SRP049776)
ENST00000661957.1	Assembled from SLRseq reads (SRP049776)
ENST00000652961.1	Assembled from SLRseq reads (SRP049776)
ENST00000667419.1	Assembled from SLRseq reads (SRP049776)
ENST00000663773.1	Assembled from SLRseq reads (SRP049776)
ENST00000668872.1	Assembled from SLRseq reads (SRP049776)
ENST00000657929.1	Assembled from SLRseq reads (SRP049776)
ENST00000656179.1	Assembled from SLRseq reads (SRP049776)
ENST00000665671.1	Assembled from SLRseq reads (SRP049776)
ENST00000660793.1	Assembled from SLRseq reads (SRP049776)
ENST00000662672.1	Assembled from SLRseq reads (SRP049776)
ENST00000669829.1	Assembled from SLRseq reads (SRP049776)
ENST00000443445.2	Assembled from SLRseq reads (SRP049776)
ENST00000443445.2	putative novel transcript
ENST00000656112.1	Assembled from SLRseq reads (SRP049776)
ENST00000655990.1	Assembled from SLRseq reads (SRP049776)
ENST00000659072.1	Assembled from SLRseq reads (SRP049776)
ENST00000653626.1	Assembled from SLRseq reads (SRP049776)
ENST00000477592.2	not organism-supported
ENST00000380283.5	MANE_select
ENST00000380283.5	novel protein
ENST00000380277.6	novel protein
ENST00000485986.1	novel transcript
ENST00000648025.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000445883.1	putative novel transcript
ENST00000648326.1	CAGE supported TSS
ENST00000648326.1	LR annotation
ENST00000648326.1	MANE_select
ENST00000380274.2	alternative 5' UTR
ENST00000415144.1	putative novel transcript
ENST00000337659.11	MANE_select
ENST00000490399.5	novel transcript
ENST00000490399.5	variants 4 through 10 could be part of the same variant
ENST00000466185.1	novel transcript
ENST00000466185.1	variants 4 through 10 could be part of the same variant
ENST00000494674.1	novel transcript
ENST00000494674.1	variants 4 through 10 could be part of the same variant
ENST00000490653.1	novel transcript
ENST00000490653.1	variants 4 through 10 could be part of the same variant
ENST00000461612.1	novel transcript
ENST00000461612.1	variants 4 through 10 could be part of the same variant
ENST00000274673.8	MANE_select
ENST00000492651.5	alternative 5' UTR
ENST00000643110.1	NMD exception
ENST00000360378.6	NMD likely if extended
ENST00000380125.6	NP_006108.2
ENST00000380118.8	MANE_select
ENST00000361538.6	alternative 5' UTR
ENST00000465828.5	alternative 5' UTR
ENST00000427591.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427591.2	putative novel transcript
ENST00000642310.1	CAGE supported TSS
ENST00000667590.1	Assembled from RACEseq reads
ENST00000669105.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667029.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671548.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000437430.2	putative novel protein
ENST00000653617.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000648679.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000380106.3	putative novel transcript
ENST00000491864.1	not organism-supported
ENST00000397588.8	MANE_select
ENST00000449732.6	alternative 5' UTR
ENST00000343762.5	NP_001137442.1
ENST00000404109.1	ribosomal protein S18 (RPS18) pseudogene
ENST00000380051.7	MANE_select
ENST00000380051.7	NP_006629.2
ENST00000653195.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663198.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671039.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671039.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000661080.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655306.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661740.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655665.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666739.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654379.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659006.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666518.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654506.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661051.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657867.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657816.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665374.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655309.1	Assembled from SLRseq reads (SRP049776)
ENST00000405617.4	MANE_select
ENST00000330636.9	MANE_select
ENST00000463032.5	confirm experimentally
ENST00000500576.4	NP_001158312.1
ENST00000324331.10	alternative 5' UTR
ENST00000602691.1	alternative 5' UTR
ENST00000648580.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000274680.9	MANE_select
ENST00000274680.9	phenylalanine-tRNA synthetase (FARS1)
ENST00000445533.1	novel protein
ENST00000403053.1	Glyceraldehyde 3-phosphate dehydrogenase (GAPDH) pseudogene
ENST00000454882.2	CAGE supported TSS
ENST00000454882.2	Putative novel transcript
ENST00000454882.2	QC splicing correct
ENST00000244766.7	MANE_select
ENST00000244766.7	Neuritin (a protein which promotes neurite outgrowth)
ENST00000495850.1	Neuritin
ENST00000264870.8	MANE_select
ENST00000414279.5	alternative 5' UTR
ENST00000658580.1	Assembled from SLRseq reads (SRP049776)
ENST00000435641.5	FLJ33708
ENST00000665459.1	Assembled from SLRseq reads (SRP049776)
ENST00000655679.1	Assembled from SLRseq reads (SRP049776)
ENST00000669477.1	Assembled from SLRseq reads (SRP049776)
ENST00000447858.1	novel transcript
ENST00000447858.1	putative novel transcript
ENST00000653438.1	Assembled from SLRseq reads (SRP049776)
ENST00000661991.1	Assembled from SLRseq reads (SRP049776)
ENST00000607278.2	Assembled from SLRseq reads (SRP049776)
ENST00000649026.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000230568.5	MANE_select
ENST00000230568.5	alternative 5' UTR
ENST00000662196.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656346.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669831.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666858.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648205.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000663164.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655459.1	Assembled from SLRseq reads (SRP049776)
ENST00000435429.2	Putative novel transcript
ENST00000423568.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423568.2	putative novel transcript
ENST00000379933.7	alternative 5' UTR
ENST00000491191.5	alternative 5' UTR
ENST00000471433.5	alternative 5' UTR
ENST00000379938.7	MANE_select
ENST00000467782.5	alternative 5' UTR
ENST00000483150.1	alternative 5' UTR
ENST00000451355.2	non canonical U12
ENST00000650292.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000650389.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000244763.9	MANE_select
ENST00000379928.4	novel transcript
ENST00000458291.6	non canonical conserved
ENST00000379918.8	non canonical conserved
ENST00000502583.6	MANE_select
ENST00000502583.6	non canonical conserved
ENST00000296742.11	non canonical conserved
ENST00000442019.6	non canonical conserved
ENST00000512086.5	non canonical conserved
ENST00000338150.8	non canonical conserved
ENST00000512691.1	non canonical conserved
ENST00000419672.1	1-aminocyclopropane-1-carboxylate synthase pseudogene
ENST00000379834.7	MANE_select
ENST00000418664.2	NP_001008844.1
ENST00000379802.8	MANE_select
ENST00000342415.6	MANE_select
ENST00000283147.7	MANE_select
ENST00000283147.7	bone morphogenetic protein 6
ENST00000379757.9	MANE_select
ENST00000397457.7	MANE_select
ENST00000486432.1	confirm experimentally
ENST00000429723.6	NP_001129122.1
ENST00000379715.10	MANE_select
ENST00000654327.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000415575.1	novel transcript
ENST00000670476.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655767.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661402.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000644923.2	MANE_select
ENST00000644923.2	alternative 5' UTR
ENST00000648987.1	upstream ATG
ENST00000379660.4	NP_057032.2
ENST00000379660.4	novel protein
ENST00000503668.2	Panzitt et al. 2007 (PMID: 17241883)
ENST00000665267.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665625.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000644213.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000431369.1	novel transcript
ENST00000492094.6	confirm experimentally
ENST00000469656.5	confirm experimentally
ENST00000485268.1	alternative 5' UTR
ENST00000462111.1	non canonical TEC
ENST00000401715.2	ribosomal protein L7A (RPL7A) pseudogene
ENST00000417077.2	ribosomal protein L21 (RPL21) pseudogene
ENST00000379608.9	CAGE supported TSS
ENST00000379608.9	LR annotation
ENST00000379608.9	NP_001027451.1
ENST00000379613.10	MANE_select
ENST00000319516.8	NP_001035890.1
ENST00000486038.1	not organism-supported
ENST00000420777.1	not organism-supported
ENST00000443546.1	novel transcript
ENST00000420389.1	novel transcript
ENST00000647739.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000496285.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655125.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656574.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000479822.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662081.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000472178.1	not organism-supported
ENST00000449333.1	novel transcript
ENST00000366312.2	novel transcript
ENST00000431401.1	novel transcript
ENST00000495262.7	MANE_select
ENST00000495262.7	NP_663624
ENST00000495262.7	alternative 5' UTR
ENST00000379597.7	NP_663624
ENST00000316170.9	NP_001482
ENST00000265012.5	NP_663630
ENST00000413129.1	novel transcript
ENST00000401900.1	glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase) (GCNT1) pseudogene
ENST00000407436.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000379591.4	could be a pseudogene
ENST00000379591.4	novel protein similar to glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (GCNT2)
ENST00000649568.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000379568.4	MANE_select
ENST00000379568.4	PAK/PLC-interacting protein 1
ENST00000229563.6	MANE_select
ENST00000229563.6	novel protein similar to PTD011
ENST00000466421.5	novel transcript
ENST00000467415.5	novel transcript
ENST00000495549.1	alternative 5' UTR
ENST00000495549.1	alternatively spliced 5' UTR; shares translation with variant 1
ENST00000495549.1	novel transcript
ENST00000659819.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000480194.5	confirm experimentally
ENST00000491103.5	confirm experimentally
ENST00000379542.10	MANE_select
ENST00000474039.5	alternative 5' UTR
ENST00000354489.7	CAGE supported TSS
ENST00000354489.7	MANE_select
ENST00000379491.5	MANE_select
ENST00000436249.3	novel transcript
ENST00000283141.11	MANE_select
ENST00000354666.4	MANE_select
ENST00000354666.4	elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2 (SSC2)
ENST00000661751.1	Assembled from SLRseq reads (SRP049776)
ENST00000666965.1	Assembled from SLRseq reads (SRP049776)
ENST00000456190.6	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000607275.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667435.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000667435.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000667154.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000456616.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657744.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000416247.4	LOC221710
ENST00000416247.4	MANE_select
ENST00000376935.4	novel transcript (FLJ25457)
ENST00000472091.2	MANE_select
ENST00000379446.10	MANE_select
ENST00000504387.5	NP_001135865.1
ENST00000379433.5	NP_892011.2
ENST00000397378.7	alternative 5' UTR
ENST00000664890.1	Assembled from SLRseq reads (SRP049776)
ENST00000665550.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000423149.1	novel transcript
ENST00000423149.1	this gene fragment and fragment 1 could be part of one single gene
ENST00000669663.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665168.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419796.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000419796.2	novel transcript
ENST00000419796.2	this gene fragment and fragment 2 could be part of one single gene
ENST00000655515.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658564.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667074.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000405864.1	protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) (PRKRIR) pseudogene
ENST00000379426.2	MANE_select
ENST00000379426.2	novel protein
ENST00000414691.8	MANE_select
ENST00000229583.9	NP_001137420.1
ENST00000379415.6	alternative 5' UTR
ENST00000379415.6	novel protein similar to hamster androgen-dependent expressed protein
ENST00000506810.1	alternative 5' UTR
ENST00000664082.1	Assembled from SLRseq reads (SRP049776)
ENST00000668350.1	Assembled from SLRseq reads (SRP049776)
ENST00000412132.1	novel transcript
ENST00000299540.6	S-adenosylmethionine decarboxylase 1 (AMD1) (1EC 4.1.1.50, ADOMETDC) pseudogene
ENST00000456036.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456036.2	novel transcript
ENST00000437559.1	novel transcript
ENST00000491710.5	alternative 5' UTR
ENST00000487103.5	alternative 5' UTR
ENST00000379388.7	MANE_select
ENST00000379388.7	NP_002105.2
ENST00000478545.1	alternative 5' UTR
ENST00000379375.6	MANE_select
ENST00000379375.6	endothelin 1 (ET1)
ENST00000405924.1	SMT3 suppressor of mif two 3 homolog 1 (yeast) (SMT3H1) pseudogene
ENST00000391491.2	novel protein identical to ribosomal protein L15 (RPL15)
ENST00000457945.1	novel transcript
ENST00000676159.1	CAGE supported TSS
ENST00000332995.12	MANE_select
ENST00000332995.12	alternative 5' UTR
ENST00000674637.1	alternative 5' UTR
ENST00000406205.7	CAGE supported TSS
ENST00000676234.1	CAGE supported TSS
ENST00000482982.2	alternative 5' UTR
ENST00000482982.2	upstream ATG
ENST00000675203.1	CAGE supported TSS
ENST00000675203.1	upstream ATG
ENST00000434977.1	novel protein (KIAA1733)
ENST00000489548.1	not organism-supported
ENST00000379335.8	CAGE supported TSS
ENST00000379329.1	novel protein (KIAA1733)
ENST00000481706.1	novel protein (KIAA1733)
ENST00000399446.6	novel transcript
ENST00000356436.8	alternative 5' UTR
ENST00000356436.8	alternatively spliced 5' UTR; shares translation with variant 1
ENST00000356436.8	novel transcript
ENST00000379300.8	MANE_select
ENST00000379300.8	novel protein (HSPC239)
ENST00000450347.5	novel protein (HSPC239)
ENST00000452989.5	alternative 5' UTR
ENST00000452989.5	alternatively spliced 5' UTR; shares translation with variant 2
ENST00000452989.5	novel transcript
ENST00000422136.5	alternative 5' UTR
ENST00000422136.5	alternatively spliced 5' UTR; shares translation with variant 1
ENST00000422136.5	novel transcript
ENST00000446018.5	alternative 5' UTR
ENST00000446018.5	alternatively spliced 5' UTR; shares translation with variant 2
ENST00000446018.5	novel transcript
ENST00000420456.5	alternative 5' UTR
ENST00000420456.5	alternatively spliced 5' UTR; shares translation with variant 2
ENST00000420456.5	novel transcript
ENST00000428109.5	alternative 5' UTR
ENST00000428109.5	alternatively spliced 5' UTR; shares translation with variant 1
ENST00000428109.5	novel transcript
ENST00000416436.5	alternative 5' UTR
ENST00000416436.5	alternatively spliced 5' UTR; shares translation with variant 1
ENST00000416436.5	novel transcript
ENST00000379291.5	alternative 5' UTR
ENST00000379291.5	alternatively spliced 5' UTR; shares translation with variant 1
ENST00000379291.5	novel transcript
ENST00000606530.1	alternative 5' UTR
ENST00000379284.1	novel protein (FLJ23357)
ENST00000379287.4	MANE_select
ENST00000379287.4	novel protein (FLJ20330)
ENST00000379287.4	novel protein (FLJ20330, FLJ30569)
ENST00000446001.1	novel transcript
ENST00000406274.1	ribosomal protein s4x (Rps4x) pseudogene
ENST00000680432.1	align_id:3719462|asmbl_209627
ENST00000681012.1	align_id:3719479|asmbl_209644
ENST00000397350.7	align_id:3719469|asmbl_209634
ENST00000679658.1	align_id:3719471|asmbl_209636
ENST00000681243.1	align_id:3719481|asmbl_209646
ENST00000680747.1	align_id:3719475|asmbl_209640
ENST00000679922.1	align_id:3719517|asmbl_209682
ENST00000680852.1	align_id:3719508|asmbl_209673
ENST00000680852.1	long_read_pipeline_2
ENST00000681818.1	align_id:3719472|asmbl_209637
ENST00000680402.1	align_id:3719478|asmbl_209643
ENST00000679663.1	align_id:3719473|asmbl_209638
ENST00000606117.2	MANE_select
ENST00000680937.1	align_id:3719470|asmbl_209635
ENST00000681905.1	align_id:3719522|asmbl_209687
ENST00000680707.1	align_id:3719513|asmbl_209678
ENST00000680151.1	align_id:1361690|asmbl_81593
ENST00000451315.7	MANE_select
ENST00000451315.7	retinoic acid repressible protein (RARG-1)
ENST00000420088.1	novel protein
ENST00000474485.1	alternative 3' UTR
ENST00000474485.1	alternatively spliced 3' UTR; shares translation with dJ223E5.2.1
ENST00000474485.1	retinoic acid repressible protein (RARG-1)
ENST00000011619.6	MANE_select
ENST00000011619.6	RAN binding protein 9 (RanBPM)
ENST00000469916.1	RAN binding protein 9 (RanBPM)
ENST00000657577.1	Assembled from SLRseq reads (SRP049776)
ENST00000488770.1	FLJ20958
ENST00000488763.5	alternative 5' UTR
ENST00000420478.2	alternative 5' UTR
ENST00000488300.6	MANE_select
ENST00000471906.1	alternative 5' UTR
ENST00000423553.6	alternative 5' UTR
ENST00000404272.2	mitochondrial ribosomal protein L35 (MRPL35) pseudogene
ENST00000427011.1	novel transcript
ENST00000379153.4	CD83 antigen (activated B lymphocytes, immunoglobulin superfamily)
ENST00000379153.4	MANE_select
ENST00000650535.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000658931.1	Assembled from SLRseq reads (SRP049776)
ENST00000455973.1	novel transcript
ENST00000427276.1	novel transcript (FLJ32264)
ENST00000456440.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456440.2	novel transcript
ENST00000434947.1	novel transcript
ENST00000666857.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000414740.2	not best-in-genome evidence
ENST00000629853.2	CAGE supported TSS
ENST00000653525.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656468.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659197.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656344.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000437648.1	novel transcript
ENST00000656807.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000396909.3	ribosomal protein L6 (RPL6) (TAXREB107) pseudogene
ENST00000341776.7	Jumonji homolog (mouse)
ENST00000341776.7	Jumonji homologue (mouse)
ENST00000341776.7	MANE_select
ENST00000341776.7	protein Q92833 has a different stop codon 19 aa further downstream because it jumps frame twice, circumventing the stopcodon in this entry. This could be due to a sequence error in the cDNA sequenceAL136162
ENST00000474854.1	novel transcript
ENST00000441978.1	putative novel transcript
ENST00000344537.10	MANE_select
ENST00000664650.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448802.1	ARPC3 actin related protein 2/3 complex, subunit 3 (21 kD) pseudogene
ENST00000451285.1	putative novel transcript
ENST00000408034.1	malate dehydrogenase pseudogene
ENST00000356840.8	MANE_select
ENST00000407522.1	P53-induced protein PIGPC1 pseudogene
ENST00000404531.1	pseudogene similar to part of eukaryotic translation initiation factor 2 subunit 2 (EIF2S2)
ENST00000403169.1	mitochondrial 28S ribosomal protein S32 (MRP-S32) pseudogene
ENST00000259727.5	3' end of GMP reductase (Guanosine 5'-monophosphate oxidoreductase, EC 1.6.6.8)
ENST00000259727.5	MANE_select
ENST00000259727.5	continued as dJ467D16 in em:AL009031
ENST00000259727.5	guanosine monophosphate reductase (GMPR)
ENST00000436367.6	CAGE supported TSS
ENST00000436367.6	MANE_select
ENST00000473388.6	QC splicing correct
ENST00000654689.1	Assembled from RACEseq reads
ENST00000654964.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654273.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000536551.6	MANE_select
ENST00000354384.5	novel transcript
ENST00000659730.1	Assembled from SLRseq reads (SRP049776)
ENST00000379052.10	MANE_select
ENST00000425446.6	NP_001137413.1
ENST00000407586.1	ESD (esterase D/formylglutathione hydrolase) pseudogene
ENST00000229922.7	MANE_select
ENST00000669865.1	Assembled from SLRseq reads (SRP049776)
ENST00000653882.1	Assembled from SLRseq reads (SRP049776)
ENST00000259963.4	MANE_select
ENST00000259963.4	family with sequence similarity 8, member A1
ENST00000262077.3	Continued_from bA500C11.1 in Em:AL138724
ENST00000262077.3	Continued_from bA68J15.1 in Em:AL157776
ENST00000262077.3	Continues_as bA14H3.5 in Em:AL138824
ENST00000262077.3	Continues_as bA68J15.1 in Em:AL157776
ENST00000262077.3	MANE_select
ENST00000262077.3	nucleoporin 153kD
ENST00000259711.11	MANE_select
ENST00000407932.1	ribosomal protein S12 (RPS12) pseudogene
ENST00000340650.6	MANE_select
ENST00000340650.6	similar to TAT-interactive protein, 72-KD; tripartite motif protein TRIM32; zinc-finger protein HT2A
ENST00000309983.5	MANE_select
ENST00000309983.5	thiopurine S-methyltransferase
ENST00000546309.6	confirm experimentally
ENST00000650836.2	MANE_select
ENST00000449850.2	NAGNAG splice site
ENST00000652689.1	CAGE supported TSS
ENST00000652689.1	LR annotation
ENST00000652689.1	MANE_select
ENST00000651992.1	alternative 5' UTR
ENST00000515770.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000244776.11	NP_001128181.1
ENST00000652576.1	alternative 5' UTR
ENST00000404856.2	RNA helicase pseudogene
ENST00000259939.4	MANE_select
ENST00000662927.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000636739.1	non canonical other
ENST00000402485.2	ribosomal protein L21 (RPL21) pseudogene
ENST00000443504.1	novel transcript
ENST00000653002.1	Assembled from SLRseq reads (SRP049776)
ENST00000668724.1	Assembled from SLRseq reads (SRP049776)
ENST00000668443.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000655581.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660410.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000648787.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000663871.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654012.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668700.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000450310.1	novel transcript
ENST00000658426.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000666186.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654927.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654927.1	putative novel transcript
ENST00000669682.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671673.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656719.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665503.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664259.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669968.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669968.1	Assembled from SLRseq reads (SRP049776)
ENST00000670218.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000445568.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000424083.1	novel transcript
ENST00000424083.1	this gene and gene dJ471C18.1 may be part of the same gene
ENST00000655647.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652778.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000457670.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000447250.1	putative novel transcript
ENST00000403848.2	ribosomal protein L5 (RPL5) (MSTP030) pseudogene
ENST00000449496.2	keratin 18 (KRT18) (CK18,CYK18) pseudogene
ENST00000407697.2	ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 (UQCRFS1) pseudogene
ENST00000378700.8	MANE_select
ENST00000378700.8	inhibitor of DNA binding 4, dominant negative helix-loop-helix protein
ENST00000659206.1	Assembled from RACEseq reads
ENST00000446953.1	ribosomal protein L29 (RPL29) (HIP, HUMRPL29) pseudogene
ENST00000324607.8	MANE_select
ENST00000449143.2	putative novel transcript
ENST00000659723.1	Assembled from SLRseq reads (SRP049776)
ENST00000662918.1	Assembled from SLRseq reads (SRP049776)
ENST00000656819.1	Assembled from SLRseq reads (SRP049776)
ENST00000665823.1	Assembled from SLRseq reads (SRP049776)
ENST00000346618.8	E2F transcription factor 3 (E2F-3, KIAA0075)
ENST00000346618.8	MANE_select
ENST00000433182.1	putative novel transcript
ENST00000274695.8	MANE_select
ENST00000274695.8	genebuild_only_MANE
ENST00000378610.1	Continued_from bA370N21.1.1 in Em:AL512405
ENST00000378610.1	Continued_from dJ201D7.1 in Em:AL022717
ENST00000378610.1	Continued_from dJ52M20.1 in Em:AL513015
ENST00000378610.1	Continues_as bA323B13.1.1 in Em:AL451080
ENST00000378610.1	Continues_as bA370N21.1.1 in Em:AL512405
ENST00000378610.1	Continues_as dJ348I23.1 in Em:AL035090
ENST00000378610.1	novel protein (FLJ20342)
ENST00000476517.1	Continues_as bA323B13.1.2 in Em:AL451080
ENST00000421167.1	novel transcript
ENST00000669568.1	Assembled from RACEseq reads
ENST00000663029.1	Assembled from SLRseq reads (SRP049776)
ENST00000447728.1	not organism-supported
ENST00000244745.4	MANE_select
ENST00000244745.4	SRY (sex determining region Y)-box 4
ENST00000671160.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000662172.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655154.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653997.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651277.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000659720.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669942.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658974.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662510.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658187.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650720.2	Assembled from SLRseq reads (SRP049776)
ENST00000653320.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663957.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659886.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668404.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670467.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668355.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664500.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664625.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657660.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660518.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000660187.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664020.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655292.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660934.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653161.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655886.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669171.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668839.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664889.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655498.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655824.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667719.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654774.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664756.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667830.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671659.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661722.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671524.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658841.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654782.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654942.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664780.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671013.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654807.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664431.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662187.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653010.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668219.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653246.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664560.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665014.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665902.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654918.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670293.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667176.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666875.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658810.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000663998.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654262.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669448.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657828.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657828.1	Assembled from SLRseq reads (SRP049776)
ENST00000606197.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651751.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666201.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666201.1	Assembled from SLRseq reads (SRP049776)
ENST00000668137.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659780.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659780.1	Assembled from SLRseq reads (SRP049776)
ENST00000657825.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664716.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663874.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657548.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662805.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664808.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661200.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655700.1	Assembled from SLRseq reads (SRP049776)
ENST00000666108.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666379.1	Assembled from SLRseq reads (SRP049776)
ENST00000653763.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661893.1	Assembled from SLRseq reads (SRP049776)
ENST00000655702.1	Assembled from SLRseq reads (SRP049776)
ENST00000561912.3	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000661662.1	Assembled from SLRseq reads (SRP049776)
ENST00000664406.1	Assembled from SLRseq reads (SRP049776)
ENST00000605917.1	polyAseq support
ENST00000669670.1	Assembled from SLRseq reads (SRP049776)
ENST00000667291.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659237.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659457.1	Assembled from SLRseq reads (SRP049776)
ENST00000566912.2	Assembled from SLRseq reads (SRP049776)
ENST00000403247.2	similar to mesenchymal stem cell protein DSC92
ENST00000306482.2	MANE_select
ENST00000306482.2	prolactin
ENST00000510882.4	MANE_select
ENST00000510882.4	similar to hepatoma-derived growth factor (high-mobility group protein 1-like) (HDGF)
ENST00000427775.2	novel transcript
ENST00000660833.1	Assembled from SLRseq reads (SRP049776)
ENST00000404015.2	ribosomal protein L6 (RPL6) pseudogene
ENST00000658716.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000402635.1	ferritin pseudogene
ENST00000407089.2	serine palmitoyltransferase, long chain base subunit 1 (SPTLC1) pseudogene
ENST00000405827.2	exonuclease FLJ12671 pseudogene
ENST00000403629.3	heterogeneous nuclear ribonucleoprotein A1 (HNRPA1) pseudogene
ENST00000463207.5	this variant and variant fragment bA260H5A.1.2 could be part of a single variant
ENST00000463207.5	vesicular membrane protein p24 (vesicular membrain protein p24) (VMP)(p24)
ENST00000378491.9	MANE_select
ENST00000378491.9	vesicular membrane protein p24
ENST00000378491.9	vesicular membrane protein p24 (vesicular membrain protein p24) (VMP)(p24)
ENST00000475830.5	this variant and variant fragment bA260H5A.1.2 could be part of a single variant
ENST00000475830.5	vesicular membrane protein p24
ENST00000378477.2	vesicular membrane protein p24
ENST00000378477.2	vesicular membrane protein p24 (vesicular membrain protein p24) (VMP)(p24)
ENST00000468195.2	vesicular membrane protein p24
ENST00000468195.2	vesicular membrane protein p24 (vesicular membrain protein p24) (VMP)(p24)
ENST00000378475.1	this variant and either of variant fragments bA31K13.2.2 or bA31K13.2.3 could be part of a single variant
ENST00000378475.1	vesicular membrane protein p24 (vesicular membrain protein p24) (VMP)(p24)
ENST00000378454.8	MANE_select
ENST00000378454.8	RU2 (RU2S)
ENST00000378450.6	RU2 (RU2S)
ENST00000436313.1	RU2 (RU2S)
ENST00000274766.2	MANE_select
ENST00000274766.2	RU2 (RU2AS)
ENST00000378386.8	MANE_select
ENST00000378386.8	MRS2-like magnesium homeostasis factor (S. cerevisiae) (HPT)
ENST00000483634.1	MRS2-like magnesium homeostasis factor (S. cerevisiae) (HPT)
ENST00000378353.5	MRS2-like magnesium homeostasis factor (S. cerevisiae) (HPT)
ENST00000446191.1	MRS2-like magnesium homeostasis factor (S. cerevisiae) (HPT)
ENST00000492917.2	glycosylphosphatidylinositol specific phospholipase D1 (GPLD1) (GPIPLD, PIGPLD, PIGPLD1)
ENST00000230036.2	MANE_select
ENST00000475417.1	glycosylphosphatidylinositol specific phospholipase D1 (GPLD1) (GPIPLD, PIGPLD, PIGPLD1)
ENST00000348925.2	NP_733936.1
ENST00000357578.8	LR annotation
ENST00000357578.8	MANE_select
ENST00000378214.8	KIAA0319 gene product
ENST00000378214.8	MANE_select
ENST00000406052.2	keratin 8 (KRT8) pseudogene
ENST00000341060.3	TRAF and TNF receptor-associated protein (TTRAP)(EAP2, AD022, MGC9099)
ENST00000378198.9	MANE_select
ENST00000378198.9	TRAF and TNF receptor-associated protein (TTRAP)(EAP2, AD022, MGC9099)
ENST00000478507.1	not organism-supported
ENST00000478285.1	TRAF and TNF receptor-associated protein (TTRAP)(EAP2, AD022, MGC9099)
ENST00000480495.1	TRAF and TNF receptor-associated protein (TTRAP)(EAP2, AD022, MGC9099)
ENST00000230048.5	MANE_select
ENST00000230048.5	novel protein (FLJ20501)
ENST00000476436.1	novel transcript
ENST00000378119.9	MANE_select
ENST00000378119.9	novel protein (FLJ12619) (DKFZP564G182)
ENST00000378102.3	novel protein (FLJ12619) (DKFZP564G182)
ENST00000665572.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665572.1	EG327502.1
ENST00000668439.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423504.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000407157.2	adaptor-related protein complex 3, sigma 1 subunit (AP3S1) (CLAPS3, Sigma3A) pseudogene
ENST00000356509.7	alternative 5' UTR
ENST00000230056.8	MANE_select
ENST00000378054.6	alternative 5' UTR
ENST00000476555.5	alternative 5' UTR
ENST00000378059.3	alternative 5' UTR
ENST00000565469.4	MANE_select
ENST00000562221.1	alternative 3' UTR
ENST00000562221.1	not organism-supported
ENST00000259698.9	LR annotation
ENST00000643898.2	MANE_select
ENST00000643898.2	NP_001273374
ENST00000538035.6	NP_001332961
ENST00000510784.8	NP_001273375
ENST00000643623.1	alternative 5' UTR
ENST00000644621.1	alternative 5' UTR
ENST00000647136.1	NP_001273376
ENST00000647309.1	alternative 5' UTR
ENST00000645703.1	alternative 5' UTR
ENST00000402100.1	cytochrome c oxidase polypeptide II pseudogene
ENST00000414949.2	peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene
ENST00000666473.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000402854.2	argininosuccinate synthetase (ASS) (ASS1 CTLN1) pseudogene
ENST00000428903.1	not organism-supported
ENST00000416595.1	novel transcript
ENST00000648291.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000401481.2	aryl hydrocarbon receptor (AHR) pseudogene
ENST00000605015.1	weak homology
ENST00000493462.2	60S Ribosomal Protein L21 pseudogene
ENST00000397093.3	heterogeneous nuclear ribonucleoprotein A3 (HNRPA3) (FBRNP, D10S102) pseudogene
ENST00000329474.7	MANE_select
ENST00000476458.1	not organism-supported
ENST00000662203.1	Assembled from SLRseq reads (SRP049776)
ENST00000377961.3	MANE_select
ENST00000377961.3	secretagogin (SECRET)
ENST00000407805.2	PX19 pseudogene
ENST00000297012.5	MANE_select
ENST00000297012.5	novel H2A histone family member
ENST00000274764.5	MANE_select
ENST00000274764.5	novel H2B histone family member
ENST00000369177.4	H2B histone family pseudogene
ENST00000406683.2	H2A histone family pseudogene
ENST00000377905.9	MANE_select
ENST00000377905.9	solute carrier family 17 (sodium phosphate), member 4
ENST00000244527.10	MANE_select
ENST00000476801.5	alternative 3' UTR
ENST00000481949.6	alternative 3' UTR
ENST00000505420.5	alternative 3' UTR
ENST00000397060.8	MANE_select
ENST00000397060.8	NP_001091956.1
ENST00000361703.10	alternative 5' UTR
ENST00000449356.2	alternative 5' UTR
ENST00000454426.1	H2A (histone 2A) pseudogene
ENST00000360488.7	Em:HSU91328 : Human hereditary haemochromatosis region, histone 2A-like protein gene, hereditary haemochromatosis (HLA-H) gene, RoRet gene, and sodium phosphate transporter (NPT3) gene, complete cds.
ENST00000360488.7	sodium phosphate solute carrier family 17 member 2
ENST00000360488.7	sodium phosphate solute carrier family 17 member 2 protein
ENST00000377850.8	MANE_select
ENST00000265425.3	sodium phosphate solute carrier family 17 member 2 protein
ENST00000357085.5	MANE_select
ENST00000658335.1	Assembled from SLRseq reads (SRP049776)
ENST00000658630.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653223.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656572.1	Assembled from SLRseq reads (SRP049776)
ENST00000670129.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656696.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660716.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000658377.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666742.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000244573.5	H1 histone family, member 1
ENST00000244573.5	MANE_select
ENST00000613854.2	H3 histone family member
ENST00000613854.2	MANE_select
ENST00000617569.2	H4 histone family member
ENST00000617569.2	MANE_select
ENST00000621411.3	H3 histone family, member L
ENST00000621411.3	MANE_select
ENST00000615868.2	H2A histone family, member M
ENST00000615868.2	MANE_select
ENST00000615966.2	H2B histone family, member F
ENST00000615966.2	MANE_select
ENST00000612966.3	H3 histone family, member C
ENST00000612966.3	MANE_select
ENST00000343677.4	H1 histone family, member 2
ENST00000343677.4	MANE_select
ENST00000352392.8	NP_620580.1
ENST00000357618.10	MANE_select
ENST00000377803.4	MANE_select
ENST00000338379.6	MANE_select
ENST00000396984.1	H2B histone family, member L
ENST00000377791.4	CAGE supported TSS
ENST00000377791.4	MANE_select
ENST00000304218.6	MANE_select
ENST00000304218.6	novel histone 1 family member
ENST00000377777.5	novel histone 2B family member
ENST00000377777.5	variant 2, alternatively spliced in 3' UTR
ENST00000289316.2	novel histone 2B family member
ENST00000289316.2	variant 1, alternatively spliced in 3' UTR
ENST00000634910.1	CAGE supported TSS
ENST00000614097.3	CAGE supported TSS
ENST00000614097.3	MANE_select
ENST00000614247.2	MANE_select
ENST00000614247.2	novel histone 4 family member
ENST00000404269.2	H1 Histone family pseudogene
ENST00000650491.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000356476.3	H3 histone family, member B
ENST00000356476.3	MANE_select
ENST00000341023.2	H2A histone family, member G
ENST00000341023.2	MANE_select
ENST00000615164.2	H4 histone family, member J
ENST00000303910.4	H2A histone family, member A
ENST00000634733.1	H3 histone family, member D
ENST00000244534.7	H1 histone family, member 3
ENST00000244534.7	MANE_select
ENST00000611444.2	H4 histone family, member L
ENST00000611444.2	MANE_select
ENST00000618052.2	H3 histone family, member I (H3/i)
ENST00000618052.2	MANE_select
ENST00000619466.2	H2B histone family, member J (H2B/j)
ENST00000614378.1	H3 histone family, member H (H3/h, H3.1)
ENST00000362070.3	H2A histone family, member K pseudogene (H2A/k)
ENST00000377733.4	H2B histone family, member K (H2B/k)
ENST00000377733.4	MANE_select
ENST00000377727.1	H4 histone family, member A
ENST00000404612.1	histone H3 pseudogene
ENST00000655687.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000530653.5	alternative 5' UTR
ENST00000377708.7	MANE_select
ENST00000377708.7	alternative 3' UTR
ENST00000527422.5	alternative 5' UTR
ENST00000396948.5	alternative 3' UTR
ENST00000352867.6	NP_853509.1
ENST00000356709.9	MANE_select
ENST00000493275.5	alternative 5' UTR
ENST00000472507.5	alternative 5' UTR
ENST00000482842.1	alternative 5' UTR
ENST00000416795.6	alternative 5' UTR
ENST00000494184.1	alternative 5' UTR
ENST00000483410.1	alternative 5' UTR
ENST00000450085.6	alternative 5' UTR
ENST00000425234.6	NP_001138481.1
ENST00000427334.5	alternative 5' UTR
ENST00000506698.1	alternative 5' UTR
ENST00000289361.11	MANE_select
ENST00000414912.2	NP_001138480.1
ENST00000494393.5	alternative 5' UTR
ENST00000471353.5	alternative 5' UTR
ENST00000496719.1	alternative 5' UTR
ENST00000244519.7	MANE_select
ENST00000312541.10	MANE_select
ENST00000429381.5	NP_510961.1
ENST00000411553.3	CAGE supported TSS
ENST00000377575.3	MANE_select
ENST00000377575.3	QC splicing correct
ENST00000477243.1	high-mobility group (nonhistone chromosomal) protein 17-like 3
ENST00000274849.3	MANE_select
ENST00000406914.1	vomeronasal olfactory 1 receptor, chromosome 6-5 pseudogene (hs6V1-5p)
ENST00000415922.7	MANE_select
ENST00000471278.5	alternative 5' UTR
ENST00000480036.5	alternative 5' UTR
ENST00000647995.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000669756.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659035.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000606878.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670365.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660952.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420081.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664178.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668297.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666341.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664092.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662403.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000424968.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661007.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652085.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000654448.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661575.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661000.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000403778.1	vomeronasal olfactory 1 receptor, chromosome 6-3 pseudogene (hs6V1-3p)
ENST00000406212.1	vomeronasal olfactory 1 receptor, chromosome 6-4 pseudogene (hs6V1-4p)
ENST00000407795.1	vomeronasal olfactory 1 receptor, chromosome 6-2 pseudogene (hs6V1-2p)
ENST00000607124.1	H2B histone family, member R
ENST00000339812.3	MANE_select
ENST00000615353.1	H4 histone family, member M
ENST00000356950.2	MANE_select
ENST00000356950.2	novel protein identical to H2B histone family, member A (H2BFA)
ENST00000377459.3	MANE_select
ENST00000377459.3	novel protein identical to H2A histone family, member I (H2AFI)
ENST00000310599.3	60S ribosomal protein L10 (RPL10) pseudogene
ENST00000230582.8	MANE_select
ENST00000447106.1	vomeronasal olfactory 1 receptor, chromosome 6-1 pseudogene (hs6V1-1p)
ENST00000416749.1	zinc finger protein pseudogene
ENST00000244576.9	MANE_select
ENST00000461521.1	alternative 5' UTR
ENST00000417812.1	possible CA binding protein similar to NEFA
ENST00000377419.1	starts in b34I8 (AL021918)
ENST00000377419.1	zinc finger protein 184 (Kruppel-like)
ENST00000648356.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000663193.1	Assembled from SLRseq reads (SRP049776)
ENST00000648816.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000401954.2	heterogeneous nuclear ribonucleoprotein A1 (HNRPA1) pseudogene
ENST00000405625.2	CD83 antigen (activated B lymphocytes, immunoglobulin superfamily) pseudogene
ENST00000404273.2	60S ribosomal protein L8 (RPL8) pseudogene
ENST00000668507.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000628328.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662411.1	Assembled from SLRseq reads (SRP049776)
ENST00000668543.1	Assembled from SLRseq reads (SRP049776)
ENST00000377401.3	H2B histone family, member C
ENST00000358739.4	H2A histone family, member C
ENST00000369163.3	H3 histone family, member K
ENST00000333151.5	H2A histone family, member E
ENST00000333151.5	MANE_select
ENST00000621112.2	H2B histone family, member E
ENST00000621112.2	MANE_select
ENST00000355057.3	H4 histone family, member E
ENST00000355057.3	MANE_select
ENST00000611927.2	H4 histone family, member D
ENST00000611927.2	MANE_select
ENST00000612898.1	H2B histone family, member D
ENST00000618958.2	H2A histone family, member D
ENST00000618958.2	MANE_select
ENST00000613174.2	H2A histone family, member I
ENST00000613174.2	MANE_select
ENST00000331442.5	H1 histone family, member 5
ENST00000331442.5	MANE_select
ENST00000616365.2	H3 histone family, member F
ENST00000616365.2	MANE_select
ENST00000618305.2	H4 histone family, member K
ENST00000618305.2	MANE_select
ENST00000359303.4	H3 histone family, member J
ENST00000359303.4	MANE_select
ENST00000359611.4	H2A histone family, member N
ENST00000359611.4	MANE_select
ENST00000616182.2	H2B histone family, member N
ENST00000616182.2	MANE_select
ENST00000303324.4	MANE_select
ENST00000303324.4	olfactory receptor, family 2, subfamily B, member 2 (hs6M1-10)
ENST00000244623.1	MANE_select
ENST00000401788.2	KIAA0036 pseudogene
ENST00000660873.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667674.1	Assembled from SLRseq reads (SRP049776)
ENST00000671586.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000432841.1	olfactory receptor, family 2, subfamily B, member 8 pseudogene (hs6M1-29P)
ENST00000377325.2	MANE_select
ENST00000377325.2	zinc finger protein 165
ENST00000340487.5	MANE_select
ENST00000330236.7	MANE_select
ENST00000330236.7	zinc finger protein 192 (LD5-1)
ENST00000457389.6	alternative 5' UTR
ENST00000562227.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000469761.1	TOB1 or 2 (transducer of ERBB2, 1 or 2) pseudogene
ENST00000531941.1	alternative 5' UTR
ENST00000252207.10	MANE_select
ENST00000531979.5	alternative 5' UTR
ENST00000647743.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000377294.3	MANE_select
ENST00000343684.4	MANE_select
ENST00000343684.4	novel protein
ENST00000316606.10	NP_689949.3
ENST00000617168.4	NP_001104509.1
ENST00000421553.7	MANE_select
ENST00000421553.7	align_id:1362359|asmbl_82262
ENST00000614088.1	align_id:3720549|asmbl_210714
ENST00000396838.6	alternative 5' UTR
ENST00000414429.5	alternative 5' UTR
ENST00000344279.10	alternative 5' UTR
ENST00000435857.5	alternative 5' UTR
ENST00000414431.1	alternative 5' UTR
ENST00000453745.5	alternative 5' UTR
ENST00000439636.5	alternative 5' UTR
ENST00000447021.1	alternative 5' UTR
ENST00000426756.5	alternative 5' UTR
ENST00000446222.5	alternative 5' UTR
ENST00000434036.5	alternative 5' UTR
ENST00000444081.5	alternative 5' UTR
ENST00000439628.5	alternative 5' UTR
ENST00000252211.7	MANE_select
ENST00000252211.7	genebuild_only_MANE
ENST00000402553.1	olfactory receptor, family 2, subfamily E, member 1 pseudogene (hs6M1-9p)
ENST00000666335.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661520.1	Assembled from SLRseq reads (SRP049776)
ENST00000361902.5	MANE_select
ENST00000474923.1	The final residue is a stop codon not a selenocysteine
ENST00000412168.7	MANE_select
ENST00000469384.1	NP_003987.2
ENST00000452236.3	MANE_select
ENST00000653030.1	Assembled from SLRseq reads (SRP049776)
ENST00000653211.1	Assembled from SLRseq reads (SRP049776)
ENST00000456103.1	putative novel transcript
ENST00000440244.1	FLJ30941
ENST00000377199.4	MANE_select
ENST00000483450.1	DKFZp686I2118
ENST00000377179.4	MANE_select
ENST00000377173.4	MANE_select
ENST00000641659.1	ENA ID EGAS00001001486
ENST00000641659.1	LOF variant in other haplotypes
ENST00000641659.1	NCBI GEO ID GSE80249
ENST00000641659.1	alternative 5' UTR
ENST00000377171.3	LOF variant in other haplotypes
ENST00000641151.2	ENA ID EGAS00001001486
ENST00000641151.2	MANE_select
ENST00000641151.2	NCBI GEO ID GSE80249
ENST00000641151.2	alternative 5' UTR
ENST00000641960.1	ENA ID EGAS00001001486
ENST00000641960.1	NCBI GEO ID GSE80249
ENST00000641960.1	alternative 5' UTR
ENST00000641739.1	ENA ID EGAS00001001486
ENST00000641417.1	ENA ID EGAS00001001486
ENST00000641417.1	alternative 5' UTR
ENST00000642091.1	ENA ID EGAS00001001486
ENST00000641299.1	ENA ID EGAS00001001486
ENST00000641875.1	ENA ID EGAS00001001486
ENST00000641112.1	ENA ID EGAS00001001486
ENST00000641895.1	ENA ID EGAS00001001486
ENST00000641895.1	MANE_select
ENST00000641768.1	ENA ID EGAS00001001486
ENST00000396806.3	MANE_select
ENST00000642051.1	ENA ID EGAS00001001486
ENST00000642051.1	LOF variant in other haplotypes
ENST00000642051.1	MANE_select
ENST00000642051.1	alternative 5' UTR
ENST00000623183.1	LOF variant in other haplotypes
ENST00000514827.2	ENA ID EGAS00001001486
ENST00000641152.2	ENA ID EGAS00001001486
ENST00000641152.2	alternative 5' UTR
ENST00000377149.5	alternative 5' UTR
ENST00000377136.5	alternative 5' UTR
ENST00000377132.1	FLJ46099
ENST00000377132.1	alternative 3' UTR
ENST00000377132.1	alternative 5' UTR
ENST00000396792.2	alternative 5' UTR
ENST00000377127.4	MANE_select
ENST00000661850.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436804.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658484.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648831.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000434657.5	FLJ40394
ENST00000641137.1	ENA ID EGAS00001001486
ENST00000641730.1	ENA ID EGAS00001001486
ENST00000642037.1	ENA ID EGAS00001001486
ENST00000377050.5	MANE_select
ENST00000377012.8	alternative 3' UTR
ENST00000377034.9	MANE_select
ENST00000462632.5	alternative 5' UTR
ENST00000641840.1	ENA ID EGAS00001001486
ENST00000641840.1	MANE_select
ENST00000641840.1	alternative 5' UTR
ENST00000376917.8	MANE_select
ENST00000431798.6	Human Swiss-Prot :Q16653-2.1
ENST00000376883.2	CAGE supported TSS
ENST00000376883.2	MANE_select
ENST00000482257.1	confirm experimentally
ENST00000259951.12	MANE_select
ENST00000606273.3	NMD likely if extended
ENST00000648999.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000476601.5	XXbac-BPG170G13.21-002
ENST00000416822.1	A known pseudogene that does not show protein matches on the F-map
ENST00000360323.11	HLA-G1
ENST00000360323.11	MANE_select
ENST00000478355.5	HLA-G5
ENST00000376818.7	HLA-G2.2
ENST00000478519.5	HLA-G2.1
ENST00000376815.3	HLA-G3
ENST00000647952.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000432679.1	A known pseudogene that does not show on the F-map
ENST00000376806.9	confirm experimentally
ENST00000376809.10	MANE_select
ENST00000376809.10	genebuild_only_MANE
ENST00000461903.1	confirm experimentally
ENST00000444051.1	DKFZp686B1842
ENST00000376785.2	alternative 5' UTR
ENST00000332435.10	MANE_select
ENST00000376773.5	alternative 5' UTR
ENST00000376772.8	MANE_select
ENST00000376751.8	upstream ATG
ENST00000244360.7	upstream ATG
ENST00000376734.4	MANE_select
ENST00000396581.6	MANE_select
ENST00000449742.7	MANE_select
ENST00000376694.9	MANE_select
ENST00000454678.7	MANE_select
ENST00000463348.5	FLJ45422
ENST00000624252.1	confirm experimentally
ENST00000665953.1	Assembled from SLRseq reads (SRP049776)
ENST00000659563.1	Assembled from SLRseq reads (SRP049776)
ENST00000669374.1	Assembled from SLRseq reads (SRP049776)
ENST00000659836.1	Assembled from SLRseq reads (SRP049776)
ENST00000659132.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659132.1	Assembled from SLRseq reads (SRP049776)
ENST00000659132.1	FLJ25550
ENST00000659132.1	FLJ31598
ENST00000670397.1	Assembled from SLRseq reads (SRP049776)
ENST00000653541.1	Assembled from SLRseq reads (SRP049776)
ENST00000653541.1	FLJ31095
ENST00000670071.1	Assembled from SLRseq reads (SRP049776)
ENST00000657595.1	Assembled from SLRseq reads (SRP049776)
ENST00000653301.1	Assembled from SLRseq reads (SRP049776)
ENST00000654996.1	Assembled from SLRseq reads (SRP049776)
ENST00000657247.1	Assembled from SLRseq reads (SRP049776)
ENST00000666294.1	Assembled from SLRseq reads (SRP049776)
ENST00000660593.1	Assembled from SLRseq reads (SRP049776)
ENST00000654915.1	Assembled from SLRseq reads (SRP049776)
ENST00000668974.1	Assembled from SLRseq reads (SRP049776)
ENST00000664861.1	Assembled from SLRseq reads (SRP049776)
ENST00000658695.1	Assembled from SLRseq reads (SRP049776)
ENST00000656629.1	Assembled from SLRseq reads (SRP049776)
ENST00000449544.6	Assembled from SLRseq reads (SRP049776)
ENST00000426882.6	Assembled from SLRseq reads (SRP049776)
ENST00000438412.6	Assembled from SLRseq reads (SRP049776)
ENST00000602290.2	Assembled from SLRseq reads (SRP049776)
ENST00000602861.6	Assembled from SLRseq reads (SRP049776)
ENST00000412685.7	Assembled from SLRseq reads (SRP049776)
ENST00000454269.6	Assembled from SLRseq reads (SRP049776)
ENST00000668243.1	Assembled from SLRseq reads (SRP049776)
ENST00000442966.7	FLJ22638
ENST00000442966.7	MANE_select
ENST00000658719.1	Assembled from SLRseq reads (SRP049776)
ENST00000376630.5	FLJ25568
ENST00000376630.5	MANE_select
ENST00000376621.7	FLJ22738
ENST00000376557.3	FLJ90050
ENST00000376560.8	MANE_select
ENST00000470703.1	FLJ16455
ENST00000441867.6	NAGNAG splice site
ENST00000326195.13	DKFZp762E013
ENST00000326195.13	MANE_select
ENST00000376511.7	MANE_select
ENST00000259873.5	MANE_select
ENST00000472267.5	DKFZp564H0223
ENST00000330083.6	MANE_select
ENST00000376483.8	FLJ13158
ENST00000329992.12	DKFZp547J097
ENST00000329992.12	NP_079185.2
ENST00000376473.9	FLJ45657
ENST00000651131.1	MANE_select
ENST00000651131.1	genebuild_only_MANE
ENST00000376442.8	MANE_select
ENST00000615892.4	CAGE supported TSS
ENST00000274853.8	DKFZp547M1314
ENST00000274853.8	DKFZp686K2113
ENST00000274853.8	FLJ39770
ENST00000274853.8	FLJ42890
ENST00000274853.8	MANE_select
ENST00000399199.7	DKFZp686M1715
ENST00000376406.8	KIAA0170
ENST00000376406.8	MANE_select
ENST00000327892.13	FLJ25906
ENST00000327892.13	MANE_select
ENST00000376389.8	FLJ20809
ENST00000376389.8	MANE_select
ENST00000376389.8	RZPDo834H1118D
ENST00000259874.6	MANE_select
ENST00000656751.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439406.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663861.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000399196.1	FLJ40693
ENST00000502955.5	alternative 5' UTR
ENST00000505066.5	alternative 5' UTR
ENST00000460944.6	alternative 5' UTR
ENST00000324771.12	alternative 5' UTR
ENST00000505534.5	alternative 5' UTR
ENST00000503180.5	alternative 5' UTR
ENST00000508317.5	alternative 5' UTR
ENST00000418800.6	alternative 5' UTR
ENST00000509639.5	alternative 5' UTR
ENST00000412274.6	alternative 5' UTR
ENST00000507901.5	alternative 5' UTR
ENST00000507046.5	alternative 5' UTR
ENST00000437124.6	alternative 5' UTR
ENST00000396342.6	alternative 5' UTR
ENST00000504651.5	alternative 5' UTR
ENST00000512694.5	alternative 5' UTR
ENST00000515233.5	alternative 5' UTR
ENST00000515881.5	alternative 5' UTR
ENST00000513043.5	alternative 5' UTR
ENST00000511510.5	alternative 5' UTR
ENST00000376569.7	alternative 5' UTR
ENST00000504927.5	alternative 5' UTR
ENST00000428153.6	alternative 5' UTR
ENST00000512336.5	alternative 5' UTR
ENST00000421124.6	alternative 5' UTR
ENST00000512725.5	alternative 5' UTR
ENST00000504679.5	alternative 5' UTR
ENST00000503670.5	alternative 5' UTR
ENST00000376567.6	alternative 5' UTR
ENST00000417521.5	FLJ27266
ENST00000259895.9	MANE_select
ENST00000376316.5	alternative 5' UTR
ENST00000676266.1	CAGE supported TSS
ENST00000676266.1	MANE_select
ENST00000428017.5	alternative 5' UTR
ENST00000541562.6	upstream ATG
ENST00000469358.5	FLJ43079
ENST00000473916.1	FLJ37164
ENST00000359086.4	MANE_select
ENST00000462446.6	DKFZp6660235
ENST00000462446.6	MANE_select
ENST00000376296.3	FLJ32050
ENST00000376296.3	MANE_select
ENST00000426185.1	FLJ37114
ENST00000259870.4	MANE_select
ENST00000467107.1	DKFZp686G23132
ENST00000259881.10	MANE_select
ENST00000376288.3	MANE_select
ENST00000259845.5	MANE_select
ENST00000396268.7	-002 and -007 are able to start at an upstream Met (when compared to usual start site). However, COX haplotype variants have a stop codon between the two Mets, preventing an alternative start site
ENST00000376266.9	FLJ20197
ENST00000376266.9	FLJ20210
ENST00000376266.9	FLJ20526
ENST00000376266.9	RZPDo834B046D
ENST00000451521.6	NP_001099033.1
ENST00000507459.5	alternative 5' UTR
ENST00000508683.5	alternative 5' UTR
ENST00000448162.6	alternative 5' UTR
ENST00000503420.5	alternative 5' UTR
ENST00000507751.5	alternative 5' UTR
ENST00000455279.6	alternative 5' UTR
ENST00000503934.5	alternative 5' UTR
ENST00000502557.5	alternative 5' UTR
ENST00000507829.5	alternative 5' UTR
ENST00000507226.1	alternative 5' UTR
ENST00000507892.1	alternative 5' UTR
ENST00000506831.1	alternative 5' UTR
ENST00000376255.4	alternative 5' UTR
ENST00000376257.8	MANE_select
ENST00000259915.13	MANE_select
ENST00000441888.7	alternative 5' UTR
ENST00000471529.6	alternative 5' UTR
ENST00000512818.5	alternative 5' UTR
ENST00000513407.1	alternative 5' UTR
ENST00000383331.4	FLJ40123
ENST00000383329.7	Q95604.1
ENST00000412585.7	MANE_select
ENST00000674131.1	alternative 5' UTR
ENST00000667609.1	Assembled from SLRseq reads (SRP049776)
ENST00000673647.1	alternative 5' UTR
ENST00000449934.7	MANE_select
ENST00000449934.7	not best-in-genome evidence
ENST00000460889.5	FLJ36634
ENST00000670109.1	Assembled from SLRseq reads (SRP049776)
ENST00000666495.2	Extended with assembled from SLRseq reads (SRP049776)
ENST00000666495.2	From TAGENE_transcript
ENST00000665353.1	Assembled from SLRseq reads (SRP049776)
ENST00000656299.1	Assembled from SLRseq reads (SRP049776)
ENST00000252229.7	MANE_select
ENST00000376191.3	MANE_select
ENST00000458640.5	alternative 5' UTR
ENST00000396172.6	MANE_select
ENST00000481456.1	FLJ45868
ENST00000475917.1	NMD likely if extended
ENST00000303892.10	MANE_select
ENST00000483251.1	NP_612139.1
ENST00000376148.9	MANE_select
ENST00000454783.5	alternative 5' UTR
ENST00000418386.3	MANE_select
ENST00000418386.3	RZPDo834H0626D
ENST00000449264.3	MANE_select
ENST00000429299.3	MANE_select
ENST00000464526.1	DKFZp781G1336
ENST00000376096.5	Human Swiss-Prot O00453-9
ENST00000376099.5	alternative 5' UTR
ENST00000438075.7	MANE_select
ENST00000433492.5	alternative 5' UTR
ENST00000376090.6	alternative 5' UTR
ENST00000376089.6	alternative 5' UTR
ENST00000340027.10	MANE_select
ENST00000376071.4	not organism-supported
ENST00000376059.8	MANE_select
ENST00000376059.8	RZPDo834F1123D
ENST00000376033.3	MANE_select
ENST00000376007.8	DKFZp686D09175
ENST00000375976.8	DKFZp686L0653
ENST00000375976.8	alternative 5' UTR
ENST00000437771.5	alternative 5' UTR
ENST00000435080.5	based on mouse cDNAs
ENST00000451898.5	skips exon
ENST00000375920.8	alternative 5' UTR
ENST00000375916.4	MANE_select
ENST00000375911.2	MANE_select
ENST00000375896.9	MANE_select
ENST00000375906.5	alternative 5' UTR
ENST00000375882.7	MANE_select
ENST00000375865.6	alternative 5' UTR
ENST00000375866.2	alternative 5' UTR
ENST00000395952.8	FLJ10345
ENST00000395952.8	FLJ13132
ENST00000395952.8	MANE_select
ENST00000492084.5	FLJ30693
ENST00000375832.5	MANE_select
ENST00000375809.7	CAGE supported TSS
ENST00000375809.7	CARS
ENST00000375809.7	FLJ35073
ENST00000375809.7	LR annotation
ENST00000649779.1	CAGE supported TSS
ENST00000649779.1	LR annotation
ENST00000649779.1	MANE_select
ENST00000375819.3	MANE_select
ENST00000483792.1	upstream uORF
ENST00000375787.6	upstream uORF
ENST00000375792.7	FLJ25805
ENST00000375789.7	MANE_select
ENST00000375784.7	FLJ26262
ENST00000652715.1	alternative 5' UTR
ENST00000425703.5	alternative 5' UTR
ENST00000375750.9	CAGE supported TSS
ENST00000375750.9	LR annotation
ENST00000375750.9	MANE_select
ENST00000375750.9	alternative 5' UTR
ENST00000498473.6	DKFZp434C1615
ENST00000491552.1	NMD likely if extended
ENST00000476085.1	alternative 3' UTR
ENST00000415669.3	NP_001034740.1
ENST00000375688.5	MANE_select
ENST00000467576.1	FLJ25524
ENST00000375663.8	MANE_select
ENST00000493387.5	non canonical TEC
ENST00000375661.6	MANE_select
ENST00000375661.6	RZPDo834D0124D
ENST00000375661.6	RZPDo834F0523D
ENST00000375654.5	MANE_select
ENST00000375651.7	MANE_select
ENST00000608703.1	FLJ38698
ENST00000375650.5	MANE_select
ENST00000649802.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000649802.1	ID: align_id:3721497|asmbl_211662
ENST00000649802.1	SLR-seq_HsBN_lib7 : HsBN_lib7:Read_486065-Barcode=BC071:length=610 ; SLR-seq_TB0000033 : TB0000033-DNA_A01-LRAAD-01:Read_262740-Barcode=BC012:length=505 ; SLR-seq_HsBN_lib6 : HsBN_lib6:Read_331042-Barcode=BC053:length=524 ; SLR-seq_TB0000035 : TB0000035-DNA_A01-LRAAD-01:Read_404123-Barcode=BC354:length=1333 ;
ENST00000375631.5	MANE_select
ENST00000678869.1	align_id:3721527|asmbl_211692
ENST00000677512.1	align_id:3721528|asmbl_211693
ENST00000677512.1	long_read_pipeline_2
ENST00000229729.11	DKFZp666M124
ENST00000229729.11	FLJ14491
ENST00000229729.11	MANE_select
ENST00000229729.11	non canonical conserved
ENST00000414427.1	non canonical conserved
ENST00000479777.1	non canonical conserved
ENST00000494816.5	FLJ35547
ENST00000465429.1	FLJ32374
ENST00000413154.5	alternative 5' UTR
ENST00000484636.1	alternative 5' UTR
ENST00000299367.10	MANE_select
ENST00000486124.5	DKFZp779M0311
ENST00000375527.3	MANE_select
ENST00000475617.5	alternative 5' UTR
ENST00000425368.7	FLJ27023
ENST00000425368.7	MANE_select
ENST00000498317.1	157263  157321
ENST00000375429.8	MANE_select
ENST00000454913.5	alternative 5' UTR
ENST00000436289.6	alternative 5' UTR
ENST00000426722.5	alternative 5' UTR
ENST00000375394.7	MANE_select
ENST00000375349.7	alternative 5' UTR
ENST00000337523.10	MANE_select
ENST00000375356.7	alternative 5' UTR
ENST00000460018.2	alternative 5' UTR
ENST00000460018.2	upstream ATG
ENST00000375331.7	upstream ATG
ENST00000463823.5	NMD likely if extended
ENST00000466336.5	NMD likely if extended
ENST00000428956.7	LR annotation
ENST00000428956.7	MANE_select
ENST00000458633.1	FLJ30050
ENST00000435363.7	LR annotation
ENST00000435363.7	MANE_select
ENST00000435122.3	NP_001122062.1
ENST00000644719.2	LR annotation
ENST00000644719.2	MANE_select
ENST00000644971.2	CAGE supported TSS
ENST00000644971.2	LR annotation
ENST00000644971.2	MANE_select
ENST00000494022.1	NMD likely if extended
ENST00000656765.1	Assembled from SLRseq reads (SRP049776)
ENST00000375203.8	MANE_select
ENST00000453203.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000375156.4	FLJ23466
ENST00000375156.4	MANE_select
ENST00000495191.5	FLJ41430
ENST00000211413.10	CAGE supported TSS
ENST00000211413.10	MANE_select
ENST00000361568.6	DKFZp564P1516
ENST00000324816.11	MANE_select
ENST00000324816.11	genebuild_only_MANE
ENST00000453656.6	NMD likely if extended
ENST00000333845.11	MANE_select
ENST00000333845.11	alternative 5' UTR
ENST00000466239.5	FLJ44493
ENST00000375107.8	MANE_select
ENST00000490711.5	FLJ31784
ENST00000375094.4	MANE_select
ENST00000375067.7	secreted isoform
ENST00000375055.6	soluble isoform
ENST00000375076.9	MANE_select
ENST00000559458.2	CAGE supported TSS
ENST00000375050.6	MANE_select
ENST00000375040.8	MANE_select
ENST00000375043.3	alternative 5' UTR
ENST00000474612.1	FLJ16302
ENST00000375023.3	MANE_select
ENST00000653922.1	Assembled from SLRseq reads (SRP049776)
ENST00000653523.1	Assembled from SLRseq reads (SRP049776)
ENST00000653107.1	Assembled from SLRseq reads (SRP049776)
ENST00000425033.1	FLJ41895
ENST00000395388.7	MANE_select
ENST00000374975.4	MANE_select
ENST00000360004.5	NP_002115.2
ENST00000422863.1	alternative 5' UTR
ENST00000395363.5	alternative 3' UTR
ENST00000343139.11	MANE_select
ENST00000374949.2	alternative 3' UTR
ENST00000374943.8	confirm experimentally
ENST00000374943.8	non canonical polymorphism
ENST00000399084.5	alternative 5' UTR
ENST00000484729.2	confirm experimentally
ENST00000374940.4	MANE_select
ENST00000374940.4	not best-in-genome evidence
ENST00000435145.6	FLJ40688
ENST00000437316.7	MANE_select
ENST00000438763.7	MANE_select
ENST00000438763.7	RZPDo834G0831D
ENST00000438763.7	RZPDo834G0832D
ENST00000648009.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000652259.1	LR annotation
ENST00000374897.4	LR annotation
ENST00000374897.4	MANE_select
ENST00000374882.8	CAGE supported TSS
ENST00000374882.8	LR annotation
ENST00000374882.8	MANE_select
ENST00000374881.3	CAGE supported TSS
ENST00000374881.3	LR annotation
ENST00000650411.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000464863.1	DKFZp686G10229
ENST00000374859.3	MANE_select
ENST00000374859.3	RZPDo834B0927D
ENST00000486332.1	FLJ41500
ENST00000354258.5	DKFZp686L1859
ENST00000354258.5	upstream ATG
ENST00000643049.2	upstream ATG
ENST00000418107.3	MANE_select
ENST00000374843.9	MANE_select
ENST00000374843.9	RZPD0834G061D
ENST00000374825.9	KIAA9001
ENST00000374825.9	MANE_select
ENST00000678778.1	long_read_pipeline_2
ENST00000679179.1	long_read_pipeline_2
ENST00000469132.2	align_id:3721889|asmbl_212054
ENST00000677331.1	align_id:3721906|asmbl_212071
ENST00000678250.1	align_id:3721887|asmbl_212052
ENST00000677085.1	long_read_pipeline_2
ENST00000374831.8	DKFZp686E1432
ENST00000374831.8	alternative 5' UTR
ENST00000495733.5	FLJ31942
ENST00000482914.5	DKFZp313H139
ENST00000464592.6	long_read_pipeline_2
ENST00000679099.1	align_id:3721902|asmbl_212067
ENST00000607833.5	CAGE supported TSS
ENST00000449025.5	DKFZp686N0336
ENST00000463639.2	align_id:1362652|asmbl_82555
ENST00000229829.7	MANE_select
ENST00000418931.7	MANE_select
ENST00000341947.7	CAGE supported TSS
ENST00000341947.7	MANE_select
ENST00000395194.1	NP_001157243.1
ENST00000374680.4	MANE_select
ENST00000374675.7	CAGE supported TSS
ENST00000374675.7	alternative 5' UTR
ENST00000374677.8	MANE_select
ENST00000374662.4	MANE_select
ENST00000374656.5	MANE_select
ENST00000666260.1	Assembled from SLRseq reads (SRP049776)
ENST00000669650.1	Assembled from SLRseq reads (SRP049776)
ENST00000658980.1	Assembled from SLRseq reads (SRP049776)
ENST00000662241.1	Assembled from SLRseq reads (SRP049776)
ENST00000445902.3	/AT-AC\ splicing between exons 10 and 11
ENST00000445902.3	MANE_select
ENST00000439602.7	MANE_select
ENST00000451237.3	MANE_select
ENST00000374617.9	MANE_select
ENST00000395131.5	alternative 5' UTR
ENST00000374610.6	alternative 5' UTR
ENST00000374606.10	MANE_select
ENST00000497454.6	MANE_select
ENST00000434618.7	MANE_select
ENST00000431845.3	MANE_select
ENST00000441117.1	alternative 5' UTR
ENST00000374542.10	MANE_select
ENST00000266000.10	alternative 5' UTR
ENST00000446403.1	alternative 5' UTR
ENST00000446511.1	alternative 5' UTR
ENST00000494082.3	MANE_select
ENST00000494082.3	NMD exception
ENST00000428849.7	MANE_select
ENST00000427004.5	alternative 5' UTR
ENST00000428274.5	alternative 5' UTR
ENST00000374516.8	MANE_select
ENST00000488034.6	MANE_select
ENST00000607266.5	CAGE supported TSS
ENST00000440279.7	CAGE supported TSS
ENST00000646630.1	CAGE supported TSS
ENST00000646630.1	LR annotation
ENST00000646630.1	MANE_select
ENST00000629380.3	NP_006763.2
ENST00000644458.1	non canonical other
ENST00000449372.7	non canonical other
ENST00000628646.2	confirm experimentally
ENST00000418600.7	confirm experimentally
ENST00000418600.7	non canonical other
ENST00000636116.1	alternative 5' UTR
ENST00000636905.1	CAGE supported TSS
ENST00000645250.1	non canonical other
ENST00000395064.3	MANE_select
ENST00000610663.1	NAGNAG splice site
ENST00000374467.4	BCL2-antagonist/killer 1
ENST00000374467.4	MANE_select
ENST00000374316.9	inositol 1,4,5-triphosphate receptor, type 3
ENST00000605930.3	MANE_select
ENST00000605930.3	genebuild_only_MANE
ENST00000374231.8	alternative 3' UTR
ENST00000607484.6	MANE_select
ENST00000293756.5	MANE_select
ENST00000293756.5	inositol hexaphosphate kinase 3
ENST00000451316.6	alternative 5' UTR
ENST00000634274.1	alternative 5' UTR
ENST00000293760.10	MANE_select
ENST00000508327.5	NP_001137416.1
ENST00000513701.1	alternative 5' UTR
ENST00000430124.7	MANE_select
ENST00000266003.9	NP_001035198.1
ENST00000664739.1	Assembled from SLRseq reads (SRP049776)
ENST00000656906.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661137.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671143.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659818.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655885.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655885.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000656180.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666060.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000533304.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666355.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669489.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660038.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665879.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662210.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661015.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663283.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668149.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659918.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669531.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655159.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667529.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660621.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663558.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000538487.7	MANE_select
ENST00000538487.7	NP_000832.1
ENST00000609222.5	NP_001243742.1
ENST00000544773.6	NP_001243741.1
ENST00000674029.1	alternative 5' UTR
ENST00000347617.10	high-mobility group (nonhistone chromosomal) protein variants I and Y variant 2
ENST00000401473.7	high-mobility group (nonhistone chromosomal) protein variants I and Y variant 1
ENST00000311487.9	MANE_select
ENST00000311487.9	high-mobility group (nonhistone chromosomal) protein variants I and Y variant 4
ENST00000478214.1	high-mobility group (nonhistone chromosomal) protein variants I and Y variant 3
ENST00000481533.5	alternative 5' UTR
ENST00000476320.6	MANE_select
ENST00000413013.6	alternative 5' UTR
ENST00000394990.8	alternative 5' UTR
ENST00000468145.1	alternative 5' UTR
ENST00000429998.2	novel transcript
ENST00000607016.2	MANE_select
ENST00000639725.1	NP_001189399.1
ENST00000639877.1	alternative 5' UTR
ENST00000494077.6	alternative 5' UTR
ENST00000494077.6	upstream ATG
ENST00000464218.5	alternative 5' UTR
ENST00000464218.5	alternatively spliced 5' UTR, shares translation with bA375E1.1.1
ENST00000464218.5	ribosomal protein S10
ENST00000467531.5	alternative 5' UTR
ENST00000467531.5	alternatively spliced 5' UTR, shares translation with bA375E1.1.1
ENST00000467531.5	ribosomal protein S10
ENST00000621356.3	alternative 5' UTR
ENST00000648437.1	CAGE supported TSS
ENST00000648437.1	LR annotation
ENST00000648437.1	MANE_select
ENST00000480942.1	ribosomal protein S10
ENST00000244458.7	MANE_select
ENST00000244458.7	protein kinase C and casein kinase substrate in neurons 1, variant 1 (KIAA1379)
ENST00000374043.6	protein kinase C and casein kinase substrate in neurons 1
ENST00000493633.5	protein kinase C and casein kinase substrate in neurons 1
ENST00000486120.5	protein kinase C and casein kinase substrate in neurons 1
ENST00000487760.1	protein kinase C and casein kinase substrate in neurons 1
ENST00000374037.8	MANE_select
ENST00000374023.8	MANE_select
ENST00000374023.8	novel protein
ENST00000374023.8	novel protein (FLJ32402)
ENST00000374026.7	novel protein (FLJ32402)
ENST00000374021.1	novel protein (FLJ32402)
ENST00000667026.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000334441.4	ATPase, H+ transporting, lysosomal (vacuolar proton pump) 14kD (ATP6S14) pseudogene
ENST00000244520.10	MANE_select
ENST00000244520.10	small nuclear ribonucleoprotein polypeptide C
ENST00000374018.5	small nuclear ribonucleoprotein polypeptide C
ENST00000374017.3	small nuclear ribonucleoprotein polypeptide C
ENST00000474635.1	small nuclear ribonucleoprotein polypeptide C
ENST00000192788.6	MANE_select
ENST00000192788.6	novel protein (FLJ20302)
ENST00000650109.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000361288.9	MANE_select
ENST00000361288.9	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28 kD
ENST00000360359.5	MANE_select
ENST00000360359.5	continueas as bA527B17.1 in Em:AL591002
ENST00000360359.5	novel Ank, SAM (Sterile alpha motif) and Phosphotyrosine interaction (PTB/PID) domain containing protein (KIAA0229)
ENST00000470698.1	novel transcript
ENST00000660796.1	Assembled from SLRseq reads (SRP049776)
ENST00000505911.6	90002
ENST00000311875.11	MANE_select
ENST00000311875.11	NP_001087197.1
ENST00000492680.6	alternative 5' UTR
ENST00000507706.5	alternative 5' UTR
ENST00000505400.5	alternative 5' UTR
ENST00000274938.8	MANE_select
ENST00000469195.5	alternative 5' UTR
ENST00000373953.8	MANE_select
ENST00000402490.1	ribosomal protein L35A (RPL35A) pseudogene
ENST00000316637.7	MANE_select
ENST00000316637.7	differentially expressed in FDCP 6 homolog (mouse)
ENST00000468102.1	differentially expressed in FDCP 6 homolog (mouse)
ENST00000360694.8	MANE_select
ENST00000360694.8	genebuild_only_MANE
ENST00000337400.6	peroxisome proliferative activated receptor, delta
ENST00000311565.4	peroxisome proliferative activated receptor, delta
ENST00000436521.2	makorin, ring finger protein, pseudogene 2
ENST00000229769.3	Fanconi anemia, complementation group E
ENST00000229769.3	MANE_select
ENST00000648059.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000322203.7	MANE_select
ENST00000322203.7	ribosomal protein RPL10a
ENST00000467020.5	ribosomal protein RPL10a
ENST00000490335.4	ribosomal protein RPL10a
ENST00000464112.5	ribosomal protein RPL10a
ENST00000478340.2	ribosomal protein RPL10a
ENST00000229771.11	MANE_select
ENST00000664260.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658088.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000450618.1	confirm experimentally
ENST00000357266.9	MANE_select
ENST00000659695.1	Assembled from SLRseq reads (SRP049776)
ENST00000452048.1	novel transcript
ENST00000373869.7	FLJ25390
ENST00000373866.4	MANE_select
ENST00000403727.1	UMP-CMP (uridine monophosphate - cytidine monophosphate) kinase pseudogene
ENST00000403376.4	MANE_select
ENST00000403376.4	NP_997292
ENST00000467122.1	novel transcript
ENST00000373861.6	MANE_select
ENST00000259938.7	MANE_select
ENST00000259938.7	colipase, pancreatic
ENST00000651132.1	alternative 5' UTR
ENST00000360215.3	LR annotation
ENST00000360215.3	MANE_select
ENST00000651676.1	alternative 3' UTR
ENST00000652718.1	alternative 3' UTR
ENST00000373825.7	MANE_select
ENST00000423325.6	non canonical TEC
ENST00000512445.5	non canonical TEC
ENST00000490799.6	MANE_select
ENST00000355574.6	alternative 5' UTR
ENST00000605269.1	disrupted by repeat
ENST00000649782.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000229794.9	MANE_select
ENST00000472333.1	alternative 5' UTR
ENST00000453556.1	nudix (nucleoside diphosphate linked moiety X) type 5 motif (nudt5) pseudogene
ENST00000476951.5	mitogen-activated protein kinase 13, (PRKM13, SAPK4, P38DELTA)
ENST00000211287.9	MANE_select
ENST00000211287.9	mitogen-activated protein kinase 13, (PRKM13, SAPK4, P38DELTA)
ENST00000373759.1	mitogen-activated protein kinase 13, (PRKM13, SAPK4, P38DELTA)
ENST00000490334.1	mitogen-activated protein kinase 13, (PRKM13, SAPK4, P38DELTA)
ENST00000526611.5	non canonical TEC
ENST00000499560.2	non canonical TEC
ENST00000660917.1	Assembled from SLRseq reads (SRP049776)
ENST00000357641.10	MANE_select
ENST00000446974.1	alternative 5' UTR
ENST00000454960.1	alternative 5' UTR
ENST00000532330.5	alternative 3' UTR
ENST00000636260.2	CAGE supported TSS
ENST00000636260.2	MANE_select
ENST00000457797.5	non canonical conserved
ENST00000437635.3	MANE_select
ENST00000340181.9	ETS transcription factor TEL-2a (TEL-2)
ENST00000340181.9	MANE_select
ENST00000373737.8	ETS transcription factor TEL-2a (TEL-2)
ENST00000411643.1	putative novel transcript
ENST00000454782.3	MANE_select
ENST00000373731.7	MANE_select
ENST00000483557.5	alternative 5' UTR
ENST00000498267.5	alternative 5' UTR
ENST00000229812.8	MANE_select
ENST00000229812.8	serine/threonine kinase 38 (NDR)
ENST00000373715.11	MANE_select
ENST00000373715.11	splicing factor, arginine/serine-rich 3 (SRP20)
ENST00000477442.6	splicing factor, arginine/serine-rich 3 (SRP20)
ENST00000620941.1	alternative 5' UTR
ENST00000454686.1	leucine aminopeptidase pseudogene
ENST00000459970.1	cyclin-dependent kinase inhibitor 1A (p21, Cip1)
ENST00000244741.10	MANE_select
ENST00000244741.10	cyclin-dependent kinase inhibitor 1A (p21, Cip1)
ENST00000373711.3	cyclin-dependent kinase inhibitor 1A (p21, Cip1)
ENST00000478800.1	cyclin-dependent kinase inhibitor 1A (p21, Cip1)
ENST00000612677.6	MANE_select
ENST00000459703.5	novel transcript
ENST00000244751.7	CCDS4825.1
ENST00000244751.7	MANE_select
ENST00000244751.7	novel copine-like protein (KIAA1599)
ENST00000493411.2	novel transcript
ENST00000650432.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000657649.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000483552.1	peptidylprolyl isomerase (cyclophilin) like protein (CGI-124)
ENST00000373699.6	MANE_select
ENST00000373699.6	peptidylprolyl isomerase (cyclophilin) like protein (CGI-124)
ENST00000373699.6	peptidylprolyl isomerase (cyclophilin)-like 1 (CYPL1, CGI-124)
ENST00000359359.6	novel protein (FLJ25357)
ENST00000355190.7	novel protein (FLJ25357)
ENST00000373685.1	novel protein (FLJ25357)
ENST00000480824.7	MANE_select
ENST00000480824.7	alternative 5' UTR
ENST00000480824.7	alternatively spliced in 5' UTR, shares CDS with dJ90K10.2.3
ENST00000480824.7	novel protein (FLJ25357)
ENST00000427609.2	putative novel transcript
ENST00000647861.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000373674.4	MANE_select
ENST00000373674.4	novel SCP-like extracellular protein
ENST00000491324.1	novel transcript
ENST00000373627.10	MANE_select
ENST00000373627.10	mitochondrial carrier homolog 1 (MTCH1) (CGI-64)
ENST00000373616.9	mitochondrial carrier homolog 1 (MTCH1) (CGI-64)
ENST00000471737.1	novel transcript
ENST00000418541.6	mitochondrial carrier homolog 1 (MTCH1) (CGI-64)
ENST00000492754.1	novel transcript
ENST00000274963.13	MANE_select
ENST00000373509.6	MANE_select
ENST00000373509.6	pim-1 oncogene (PIM)
ENST00000468243.5	novel transcript
ENST00000479509.1	novel transcript
ENST00000356757.7	alternative 5' UTR
ENST00000652386.1	NAGNAG splice site
ENST00000652639.1	NP_001156372.1
ENST00000357219.4	alternative 5' UTR
ENST00000650812.1	alternative 5' UTR
ENST00000478262.2	alternative 5' UTR
ENST00000373491.3	MANE_select
ENST00000658561.1	Assembled from SLRseq reads (SRP049776)
ENST00000656557.1	Assembled from SLRseq reads (SRP049776)
ENST00000373479.9	MANE_select
ENST00000469731.5	NP_898901.1
ENST00000471097.1	novel transcript
ENST00000455891.5	This variant and variants 1.4 1.5 1.6 and 1.7 could be part of the same variant
ENST00000455891.5	novel protein (FLJ20341)
ENST00000373451.9	MANE_select
ENST00000493656.1	This variant and variants 1.4 1.5 1.6 and 1.7 could be part of the same variant
ENST00000493656.1	putative novel transcript
ENST00000475364.1	This variant and variants 1.2 1.3 and 1.8 could be part of the same variant
ENST00000475364.1	novel protein
ENST00000457419.1	This variant and variants 1.2 1.3 and 1.8 could be part of the same variant
ENST00000457419.1	novel protein
ENST00000373408.4	MANE_select
ENST00000445172.1	novel transcript
ENST00000656831.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000434837.8	MANE_select
ENST00000650466.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000508399.1	alternative 5' UTR
ENST00000415890.1	novel transcript
ENST00000287218.9	MANE_select
ENST00000314100.10	NP_689946.2
ENST00000481247.6	MANE_select
ENST00000649492.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000497373.1	alternative 5' UTR
ENST00000498633.1	alternative 5' UTR
ENST00000412822.1	putative novel transcript
ENST00000404701.1	TRK-fused gene (TFG) pseudogene
ENST00000373365.5	MANE_select
ENST00000439844.2	putative novel transcript
ENST00000327475.11	MANE_select
ENST00000359357.7	5' UTR
ENST00000359357.7	dynein, axonemal, heavy polypeptide 8 (HDHC9)
ENST00000359357.7	dynein, axonemal, heavy polypeptide 8, (HDHC9)
ENST00000394393.3	dynein, axonemal, heavy polypeptide 8 (HDHC9) (fragment)
ENST00000404462.1	novel pseudogene similar to zuotin related factor-1 (ZRF1) (MPP11; MPHOSPH11)
ENST00000418399.5	novel transcript
ENST00000416948.1	novel transcript
ENST00000453417.1	novel transcript
ENST00000407768.1	pseudogene similar to part of 40S Ribosomal protein S2 (RPS2)
ENST00000490892.1	RPS2 (40S ribosomal protein S2) pseudogene
ENST00000373256.5	MANE_select
ENST00000229903.5	MANE_select
ENST00000481599.1	novel transcript
ENST00000405487.1	pseudogene similar to part of breast cancer antigen NY-BR-1
ENST00000359534.4	MANE_select
ENST00000359534.4	potassium channel, subfamily K, member 5 (TASK-2)
ENST00000373231.9	MANE_select
ENST00000453413.2	NP_001128583.1
ENST00000425054.6	NP_001128577.1
ENST00000507712.5	CAGE supported TSS
ENST00000373227.8	NP_001128579.1
ENST00000437525.3	MANE_select
ENST00000437525.3	NP_001128578.1
ENST00000287152.12	MANE_select
ENST00000305491.5	novel pseudogene
ENST00000274867.9	MANE_select
ENST00000398904.6	alternative 5' UTR
ENST00000340692.10	MANE_select
ENST00000373188.6	This transcript is potentially bicistronic because a second ORF for a putative MOCS1B protein exists at 5697-4948.  This second CDS has not been annotated because there is insufficent experimental evidence to support the translation of this region as a separate entity
ENST00000373188.6	molybdenum cofactor synthesis 1 (molybdenum cofactor deficiency type A, MOCOD)
ENST00000373195.7	molybdenum cofactor synthesis 1 (molybdenum cofactor deficiency type A, MOCOD), variant 3 (MOCS1A-MOCS1B, splice type III)
ENST00000425303.6	Based on human synthetic BC140421.1
ENST00000432280.2	confirm experimentally
ENST00000649703.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000405234.1	pseudogene similar to tubulin beta polypeptide (TUBB)
ENST00000325612.5	pseudogene similar to 60S ribosomal protein L23 (RPL23) (L17)
ENST00000444731.1	putative novel transcript
ENST00000451810.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451810.3	putative novel transcript
ENST00000660989.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448559.5	putative novel transcript
ENST00000655318.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671430.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652779.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653048.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448433.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448433.6	putative novel transcript
ENST00000665631.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665433.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660693.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670828.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664585.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654292.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000373170.2	putative novel transcript
ENST00000373171.2	putative novel transcript
ENST00000447315.1	putative novel transcript
ENST00000338305.7	5' UTR
ENST00000338305.7	MANE_select
ENST00000338305.7	novel protein (KIAA1246)
ENST00000414505.1	putative novel transcript
ENST00000648418.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000659707.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000442781.1	putative novel transcript
ENST00000438818.1	novel transcript
ENST00000244565.8	MANE_select
ENST00000244565.8	genebuild_only_MANE
ENST00000373164.1	novel protein
ENST00000470102.1	not organism-supported
ENST00000424266.7	MANE_select
ENST00000424266.7	alternative 5' UTR
ENST00000463088.5	alternative 5' UTR
ENST00000480585.5	alternative 5' UTR
ENST00000464633.5	alternative 5' UTR
ENST00000468811.5	alternative 5' UTR
ENST00000488238.5	alternative 5' UTR
ENST00000469104.5	alternative 5' UTR
ENST00000373161.6	MANE_select
ENST00000470917.1	alternative 5' UTR
ENST00000244669.3	MANE_select
ENST00000244669.3	apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2
ENST00000341376.10	nuclear transcription factor Y, alpha (CCAAT-Binding transcription factor subunit B, CBF-B, CAAT-Box DNA binding protein subunit A)
ENST00000353205.5	nuclear transcription factor Y, alpha (CCAAT-Binding transcription factor subunit B, CBF-B, CAAT-Box DNA binding protein subunit A)
ENST00000662845.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000567255.2	non canonical polymorphism
ENST00000373113.8	MANE_select
ENST00000483722.2	MANE_select
ENST00000448827.6	alternative 5' UTR
ENST00000341495.7	MANE_select
ENST00000244709.9	MANE_select
ENST00000407513.1	TREM1 pseudogene
ENST00000422246.1	ribosomal protein L32 pseudogene
ENST00000373089.10	MANE_select
ENST00000660223.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652969.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000307972.10	MANE_select
ENST00000670130.1	CAGE supported TSS
ENST00000230321.11	MANE_select
ENST00000343317.11	SDonaldson April 2020
ENST00000419574.6	CAGE supported TSS
ENST00000445214.2	3' end is inferred
ENST00000445214.2	CAGE supported TSS
ENST00000424495.2	align_id:3723118|asmbl_213283
ENST00000373033.6	MANE_select
ENST00000358871.6	CAGE supported TSS
ENST00000679217.1	align_id:3723122|asmbl_213287
ENST00000678871.1	align_id:3723120|asmbl_213285
ENST00000679237.1	align_id:3723119|asmbl_213284
ENST00000373025.7	MANE_select
ENST00000373018.7	MANE_select
ENST00000458694.6	MANE_select
ENST00000398881.4	MANE_select
ENST00000398881.4	alternative 3' UTR
ENST00000373010.5	non canonical TEC
ENST00000265350.9	MANE_select
ENST00000230340.9	MANE_select
ENST00000511642.5	NP_001129489.1
ENST00000372991.9	MANE_select
ENST00000415497.6	NP_001129598.1
ENST00000372988.8	alternative 5' UTR
ENST00000414200.6	NP_001129597.1
ENST00000508143.5	alternative 5' UTR
ENST00000505064.1	alternative 5' UTR
ENST00000502771.1	alternative 5' UTR
ENST00000514588.1	alternative 5' UTR
ENST00000412701.1	putative novel transcript
ENST00000494547.5	alternative 3' UTR
ENST00000372977.8	MANE_select
ENST00000341865.9	MANE_select
ENST00000623004.2	MANE_select
ENST00000623004.2	novel protein
ENST00000372958.2	CAGE supported TSS
ENST00000372958.2	MANE_select
ENST00000679182.1	CAGE supported TSS
ENST00000230361.4	MANE_select
ENST00000230361.4	guanylate cyclase activator 1B (retina)
ENST00000053468.4	MANE_select
ENST00000053468.4	mitochondrial ribosomal protein S10 (MRPS10)
ENST00000372922.8	zinc finger transcription regulating protein TReP-132
ENST00000340840.6	zinc finger transcription regulating protein TReP-132 (RAPA-2)
ENST00000354325.2	zinc finger transcription regulating protein TReP-132 (RAPA-1)
ENST00000372899.6	KIAA0349 protein
ENST00000372901.2	CAGE supported TSS
ENST00000372901.2	MANE_select
ENST00000230381.7	MANE_select
ENST00000230381.7	retinal degeneration, slow (retinitis pigmentosa 7)
ENST00000417255.1	similar to ATP6C (nATPase, H+ transporting, lysosomal (vacuolar proton pump) 16kD)
ENST00000372876.2	MANE_select
ENST00000372876.2	tubulin-specific chaperone c variant 1
ENST00000493763.7	MANE_select
ENST00000304734.9	alternative 3' UTR
ENST00000462348.1	non canonical TEC
ENST00000408925.4	2310039H08Rik
ENST00000408925.4	MANE_select
ENST00000670952.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000304672.6	MANE_select
ENST00000667155.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000372836.5	MANE_select
ENST00000450671.1	novel transcript
ENST00000372808.4	MANE_select
ENST00000372808.4	glycine N-methyltransferase
ENST00000304611.13	MANE_select
ENST00000304611.13	peroxisomal biogenesis factor 6
ENST00000394110.7	Non canonical donor splice site between exons 3 and 4
ENST00000394110.7	non canonical conserved
ENST00000485511.6	MANE_select
ENST00000642555.1	alternative 5' UTR
ENST00000244711.4	MANE_select
ENST00000645375.1	alternative 5' UTR
ENST00000645410.1	alternative 5' UTR
ENST00000326974.9	MANE_select
ENST00000244496.6	MANE_select
ENST00000265348.9	MANE_select
ENST00000674134.1	alternative 5' UTR
ENST00000674134.1	upstream ATG
ENST00000478630.1	novel transcript
ENST00000347162.10	MANE_select
ENST00000259708.7	NP_958931.1
ENST00000472792.1	alternative 5' UTR
ENST00000479388.5	alternative 5' UTR
ENST00000460283.1	alternative 5' UTR
ENST00000394056.6	alternative 5' UTR
ENST00000481888.1	alternative 5' UTR
ENST00000388752.8	MANE_select
ENST00000230419.9	MANE_select
ENST00000265354.6	Continued_from bA387M24.5 in Em:AL355385
ENST00000265354.6	Continues_as dJ330M21.1 in Em:AL133375
ENST00000265354.6	MANE_select
ENST00000265354.6	serum response factor (c-fos serum response element-binding transcription factor)
ENST00000252050.9	MANE_select
ENST00000230431.11	MANE_select
ENST00000393987.2	NP_954653.1
ENST00000259750.9	MANE_select
ENST00000480882.5	solute carrier family 22 (organic anion transporter), member 7 (NLT, OAT2)
ENST00000487175.5	solute carrier family 22 (organic anion transporter), member 7 (NLT, OAT2)
ENST00000451757.5	solute carrier family 22 (organic anion transporter), member 7 (NLT, OAT2)
ENST00000372585.10	MANE_select
ENST00000372585.10	solute carrier family 22 (organic anion transporter), member 7 (NLT, OAT2)
ENST00000449231.5	solute carrier family 22 (organic anion transporter), member 7 (NLT, OAT2)
ENST00000498232.1	solute carrier family 22 (organic anion transporter), member 7 (NLT, OAT2), variant 2 (isoform b)
ENST00000372589.7	solute carrier family 22 (organic anion transporter), member 7 (NLT, OAT2), variant 1 (isoform a)
ENST00000372574.7	solute carrier family 22 (organic anion transporter), member 7 (NLT, OAT2)
ENST00000436107.1	solute carrier family 22 (organic anion transporter), member 7 (NLT, OAT2)
ENST00000416431.5	novel protein
ENST00000372569.8	MANE_select
ENST00000372569.8	novel protein similar to M. musculus thymus LIM protein TLP-A (LOC168153)
ENST00000451294.5	novel protein
ENST00000361428.3	MANE_select
ENST00000406185.1	ribosomal protein L12 (RPL12) pseudogene
ENST00000406943.1	ribosomal protein L34 (RPL34) pseudogene
ENST00000314255.4	ribosomal protein S2 (RPS2) pseudogene
ENST00000428602.1	ribosomal protein S2 pseudogene
ENST00000657856.1	Assembled from SLRseq reads (SRP049776)
ENST00000653299.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000372530.9	MANE_select
ENST00000430324.5	novel protein
ENST00000372488.8	MANE_select
ENST00000372488.8	alternative 5' UTR
ENST00000372488.8	alternatively spliced 5' UTR; shares CDS with dJ895C5.2.1
ENST00000372488.8	novel protein
ENST00000372485.5	novel protein
ENST00000357338.3	alternative 5' UTR
ENST00000357338.3	alternatively spliced 5' UTR; shares CDS with dJ895C5.2.3
ENST00000357338.3	novel protein (FLJ30818) similar to delta-like
ENST00000372454.6	alternative 5' UTR
ENST00000372454.6	alternatively spliced 5' UTR; shares CDS with dJ337H4.1.1, dJ337H4.1.3 and dJ337H4.1.6
ENST00000372454.6	novel protein
ENST00000442878.6	alternative 5' UTR
ENST00000259751.5	alternative 5' UTR
ENST00000259751.5	alternatively spliced 5' UTR; shares CDS with dJ337H4.1.2, dJ337H4.1.6 and dJ337H4.1.3
ENST00000259751.5	novel protein, variant 1 (FLJ14207)
ENST00000259751.5	novel protein, variant 1 (FLJ14207, FLJ23661)
ENST00000372452.5	alternative 5' UTR
ENST00000372452.5	alternatively spliced 5' UTR; shares CDS with dJ337H4.1.1, dJ337H4.1.2 and dJ337H4.1.6
ENST00000372452.5	novel protein
ENST00000372449.5	alternative 5' UTR
ENST00000372449.5	alternatively spliced 5' UTR; shares CDS with dJ337H4.1.5
ENST00000372449.5	novel protein
ENST00000483640.5	novel transcript
ENST00000478173.5	novel transcript
ENST00000459851.5	novel transcript
ENST00000490050.1	novel transcript
ENST00000490050.1	this variant fragment and variant fragments .1.8 could be part of a single variant
ENST00000454762.1	novel protein (DKFZp434D111)
ENST00000372441.1	novel protein
ENST00000642195.1	LR annotation
ENST00000642195.1	MANE_select
ENST00000643799.1	alternative 3' UTR
ENST00000607635.2	alternative 3' UTR
ENST00000372422.7	MANE_select
ENST00000265351.12	MANE_select
ENST00000402069.1	40S ribosomal protein S2 (RPS2) pseudogene
ENST00000372236.9	DNA directed polymerase eta (XP-V, RAD30A)
ENST00000372236.9	MANE_select
ENST00000372226.1	DNA directed polymerase eta (XP-V, RAD30A)
ENST00000443535.1	DNA directed polymerase eta (XP-V, RAD30A)
ENST00000417591.1	putative novel transcript
ENST00000496137.5	GTP binding protein 2
ENST00000419497.5	GTP binding protein 2
ENST00000432918.5	GTP binding protein 2
ENST00000476510.5	GTP binding protein 2
ENST00000307126.10	GTP binding protein 2
ENST00000307126.10	MANE_select
ENST00000459959.1	GTP binding protein 2
ENST00000442748.5	GTP binding protein 2
ENST00000480263.1	GTP binding protein 2 (GTPBP2)
ENST00000452781.1	GTP binding protein 2
ENST00000451025.6	NP_001003690.1
ENST00000372171.5	MANE_select
ENST00000372163.5	MANE_select
ENST00000372163.5	novel protein
ENST00000372165.8	novel protein (FLJ30845)
ENST00000372133.8	MANE_select
ENST00000372133.8	mitochondrial ribosomal protein S18A (S18bmt, FLJ10548, MRPS18-3, HumanS18b, MRP-S18-3, mitochondrial ribosomal protein S18-3)
ENST00000372116.5	mitochondrial ribosomal protein S18A (S18bmt, FLJ10548, MRPS18-3, HumanS18b, MRP-S18-3, mitochondrial ribosomal protein S18-3)
ENST00000427312.1	mitochondrial ribosomal protein S18A (S18bmt, FLJ10548, MRPS18-3, HumanS18b, MRP-S18-3, mitochondrial ribosomal protein S18-3)
ENST00000406079.1	novel pseudogene similar to OPA-interacting protein (OIP21)
ENST00000424283.1	novel transcript
ENST00000372067.8	NP_001020539.2
ENST00000324450.11	NP_001165093.1
ENST00000417285.7	NP_001020540.2
ENST00000413642.8	NP_001020538.2
ENST00000372055.9	NP_001020537.2
ENST00000482630.7	NP_001028928.1
ENST00000425836.7	NP_003367.4
ENST00000372064.9	NP_001020541.2
ENST00000372077.8	NP_001165099.1
ENST00000519767.5	confirm experimentally
ENST00000520948.5	NP_001165095.1
ENST00000523873.5	NP_001165094.1
ENST00000523950.5	NP_001165097.1
ENST00000457104.6	NP_001165101.1
ENST00000518689.5	NP_001165096.1
ENST00000523125.5	NP_001165098.1
ENST00000518824.5	NP_001165100.1
ENST00000649831.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000451910.1	putative novel transcript
ENST00000422059.5	novel transcript
ENST00000652850.1	Assembled from SLRseq reads (SRP049776)
ENST00000655938.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000455005.1	novel transcript
ENST00000331979.5	ribosomal protein L29 (RPL29) pseudogene
ENST00000372014.5	5' UTR
ENST00000372014.5	MANE_select
ENST00000372014.5	novel protein similar to ribosomal protein L14 (L14p/L23e)
ENST00000532634.5	alternative 5' UTR
ENST00000323267.11	MANE_select
ENST00000323267.11	genebuild_only_MANE
ENST00000398776.2	MANE_select
ENST00000573382.3	MANE_select
ENST00000573382.3	alternative 5' UTR
ENST00000651428.1	alternative 5' UTR
ENST00000393844.7	CAGE supported TSS
ENST00000652680.1	NAGNAG splice site
ENST00000643028.2	upstream ATG
ENST00000371713.6	alternative 5' UTR
ENST00000371713.6	upstream ATG
ENST00000371740.10	alternative 5' UTR
ENST00000371740.10	alternatively spliced 5' UTR; shares CDS with variants dJ302G2.1.1, dJ302G2.1.2 and dJ302G2.1.4 to dJ302G2.1.7
ENST00000371740.10	equilibrative nucleoside transporter 1 (solute carrier family 29, ENT1)
ENST00000371755.9	CAGE supported TSS
ENST00000371755.9	MANE_select
ENST00000371755.9	alternative 5' UTR
ENST00000371755.9	upstream ATG
ENST00000643869.1	alternative 5' UTR
ENST00000371731.6	alternative 5' UTR
ENST00000393841.6	alternative 5' UTR
ENST00000371724.6	NAGNAG splice site
ENST00000371724.6	alternative 5' UTR
ENST00000642777.1	NAGNAG splice site
ENST00000642777.1	alternative 5' UTR
ENST00000645692.1	alternative 5' UTR
ENST00000645259.1	alternative 5' UTR
ENST00000647460.1	alternative 5' UTR
ENST00000646582.1	alternative 5' UTR
ENST00000371708.1	alternative 5' UTR
ENST00000371708.1	alternatively spliced 5' UTR; shares CDS with variants dJ302G2.1.1 to dJ302G2.1.3 and dJ302G2.1.5 to dJ302G2.1.7
ENST00000371708.1	equilibrative nucleoside transporter 1 (solute carrier family 29, ENT1)
ENST00000353801.7	alternative 5' UTR
ENST00000353801.7	alternatively spliced 5' UTR; shares CDS with dJ302G2.2.1 and dJ302G2.2.3
ENST00000353801.7	heat-shock 90 kDa protein 1, beta (HSPC2, D6S182, HSP90-BETA)
ENST00000371646.10	MANE_select
ENST00000371646.10	alternative 5' UTR
ENST00000371646.10	alternatively spliced 5' UTR; shares CDS with dJ302G2.2.2 and dJ302G2.2.3
ENST00000371646.10	heat-shock 90 kDa protein 1, beta (HSPC2, D6S182, HSP90-BETA)
ENST00000371554.2	alternative 5' UTR
ENST00000371554.2	alternatively spliced 5' UTR; shares CDS with dJ302G2.2.1 and dJ302G2.2.2
ENST00000371554.2	heat-shock 90 kDa protein 1, beta (HSPC2, D6S182, HSP90-BETA)
ENST00000393812.4	MANE_select
ENST00000619360.6	MANE_select
ENST00000443607.2	alternative 3' UTR
ENST00000443607.2	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon (IKBE)
ENST00000477930.2	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon (IKBE)
ENST00000451188.7	MANE_select
ENST00000371505.5	MANE_select
ENST00000371504.1	novel protein
ENST00000244571.5	KIAA1270
ENST00000244571.5	MANE_select
ENST00000491573.1	novel transcript
ENST00000674044.1	MANE_select
ENST00000674044.1	alternative 5' UTR
ENST00000515220.5	alternative 5' UTR
ENST00000371477.4	MANE_select
ENST00000663213.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661053.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436113.1	novel transcript
ENST00000671451.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000475057.5	suppressor of Ty 3 homolog (S. cerevisiae)
ENST00000371459.6	MANE_select
ENST00000371458.1	suppressor of Ty 3 homolog (S. cerevisiae)
ENST00000459689.1	suppressor of Ty 3 homolog (S. cerevisiae)
ENST00000405824.1	pseudogene similar to part of poly(rC) binding protein 3 (PCBP3)
ENST00000483243.5	runt-related transcription factor 2
ENST00000647337.2	LR annotation
ENST00000647337.2	MANE_select
ENST00000647337.2	alternative 5' UTR
ENST00000647337.2	upstream ATG
ENST00000371438.5	upstream ATG
ENST00000576263.5	confirm experimentally
ENST00000473041.1	runt-related transcription factor 2
ENST00000339561.12	MANE_select
ENST00000544153.3	NP_001242952.1
ENST00000476852.1	chloride intracellular channel 5
ENST00000464137.1	chloride intracellular channel 5
ENST00000669498.1	Assembled from SLRseq reads (SRP049776)
ENST00000669498.1	novel transcript
ENST00000444038.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000437249.2	confirm experimentally
ENST00000437249.2	novel transcript
ENST00000321037.5	MANE_select
ENST00000371383.7	MANE_select
ENST00000230565.3	alternative 5' UTR
ENST00000230565.3	alternatively spliced in 5' UTR, shares CDS with dJ8B1.3.1
ENST00000230565.3	ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative function)
ENST00000492313.1	putative novel transcript
ENST00000457622.1	actin, gamma pseudogene 9
ENST00000330430.10	Down syndrome critical region gene 1-like 1 (MCIP2 ZAKI-4)
ENST00000371374.6	Down syndrome critical region gene 1-like 1 (MCIP2 ZAKI-4)
ENST00000371374.6	MANE_select
ENST00000306764.11	Down syndrome critical region gene 1-like 1 (MCIP2 ZAKI-4)
ENST00000415787.1	novel transcript
ENST00000665854.1	Assembled from SLRseq reads (SRP049776)
ENST00000664425.1	Assembled from SLRseq reads (SRP049776)
ENST00000657801.1	Assembled from SLRseq reads (SRP049776)
ENST00000275016.3	MANE_select
ENST00000275016.3	cytochrome P450, subfamily XXXIX (oxysterol 7 alpha-hydroxylase), polypeptide 1
ENST00000489657.1	This variant and variant .2 could be part of the same variant
ENST00000489657.1	cytochrome P450, subfamily XXXIX (oxysterol 7 alpha-hydroxylase), polypeptide 1
ENST00000476076.1	This variant and variant .2 could be part of the same variant
ENST00000476076.1	cytochrome P450, subfamily XXXIX (oxysterol 7 alpha-hydroxylase), polypeptide 1
ENST00000480804.1	This variant and variants .5 and .4 could be part of the same variant
ENST00000480804.1	cytochrome P450, subfamily XXXIX (oxysterol 7 alpha-hydroxylase), polypeptide 1
ENST00000371347.10	MANE_select
ENST00000371347.10	uncoupling protein 4 (UCP4)
ENST00000603486.5	this variant and variant 6 could be part of the same variant
ENST00000603486.5	uncoupling protein 4 (UCP4)
ENST00000604908.1	7
ENST00000604908.1	novel transcript
ENST00000604217.5	uncoupling protein 4 (UCP4)
ENST00000604127.5	uncoupling protein 4 (UCP4)
ENST00000604616.1	uncoupling protein 4 (UCP4)
ENST00000603501.1	putative novel transcript
ENST00000603501.1	this variant and variant 2 could be part of the same variant
ENST00000422284.6	novel transcript
ENST00000434329.2	novel transcript
ENST00000316081.11	MANE_select
ENST00000316081.11	novel tudor domain containing protein
ENST00000450697.1	novel protein
ENST00000274793.12	MANE_select
ENST00000274793.12	phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) (PAFAH, LDL-PLA2).
ENST00000565422.2	upstream ATG
ENST00000445060.1	novel transcript (FLJ33075)
ENST00000438738.1	putative novel transcript
ENST00000230588.9	MANE_select
ENST00000230588.9	meprin A, alpha (PABA peptide hydrolase) (PPHA)
ENST00000283296.12	MANE_select
ENST00000283296.12	genebuild_only_MANE
ENST00000498632.1	novel transcript
ENST00000478711.1	novel transcript
ENST00000451135.1	novel transcript
ENST00000371253.7	MANE_select
ENST00000477858.1	novel transcript
ENST00000296861.2	MANE_select
ENST00000296861.2	Tumor necrosis factor receptor superfamily member 21 (DR6)
ENST00000663906.1	Assembled from SLRseq reads (SRP049776)
ENST00000359314.5	MANE_select
ENST00000479857.1	CD2-associated protein
ENST00000407698.1	40S ribosomal protein S12 (RPS12) pseudogene
ENST00000507065.5	confirm experimentally
ENST00000296862.5	confirm experimentally
ENST00000467205.6	confirm experimentally
ENST00000283303.3	MANE_select
ENST00000446733.1	putative novel transcript
ENST00000403255.1	ribosomal protein L27A (RPL27A) pseudogene
ENST00000339488.9	CHS.46518.5
ENST00000679966.1	CHS.46518.6
ENST00000661865.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000427514.1	heterogeneous nuclear ribonucleoprotein pseudogene
ENST00000408004.1	RNA binding motif protein, X chromosome pseudogene 1
ENST00000657524.1	Assembled from SLRseq reads (SRP049776)
ENST00000404962.1	pseudogene similar to part of myotubularin related protein 9 MTMR9
ENST00000402892.1	zinc finger pseudogene (ZNF216)
ENST00000274813.4	MANE_select
ENST00000274813.4	methylmalonyl Coenzyme A mutase
ENST00000335783.4	Continued_from bA463L20.2 in Em:AL590668
ENST00000335783.4	MANE_select
ENST00000335783.4	novel protein
ENST00000371197.9	MANE_select
ENST00000545705.1	alternative 5' UTR
ENST00000407830.1	cytochrome P450 pseudogene
ENST00000371175.10	Continued_from dJ442L6.1 in Em:AL121950
ENST00000371175.10	Continues_as bA28H17.5 in Em:AL590244
ENST00000371175.10	MANE_select
ENST00000371175.10	Rhesus blood group-associated glycoprotein (RH50A)
ENST00000339139.5	MANE_select
ENST00000653295.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666991.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664855.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664940.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670591.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667241.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669781.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654478.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657039.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662758.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655840.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659543.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659543.1	confirm experimentally
ENST00000667723.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665059.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660233.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668645.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657949.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667143.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654475.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667596.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662257.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662077.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000437859.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000263045.9	MANE_select
ENST00000263045.9	NP_006052.2
ENST00000304801.6	MANE_select
ENST00000304801.6	phosphoglycerate kinase 2
ENST00000430821.1	Continues_as dJ417L20.3 in Em:AL121974
ENST00000430821.1	novel transcript
ENST00000335847.9	MANE_select
ENST00000505118.1	alternative 5' UTR
ENST00000620560.2	sequence error
ENST00000322066.4	MANE_select
ENST00000398718.1	MANE_select
ENST00000371148.3	MANE_select
ENST00000651554.2	MANE_select
ENST00000656228.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648417.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000415106.1	novel transcript
ENST00000670634.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426547.1	putative novel transcript
ENST00000431394.5	novel transcript
ENST00000454135.1	novel transcript
ENST00000008391.4	MANE_select
ENST00000008391.4	novel protein similar to transcription factor AP-2
ENST00000492804.1	not organism-supported
ENST00000344788.7	transcription factor AP-2 beta (activating enhancer-binding protein 2 beta)
ENST00000393655.4	MANE_select
ENST00000489228.1	transcription factor AP-2 beta (activating enhancer-binding protein 2 beta)
ENST00000402760.2	pseudogene similar to part of nuclear transport receptor MTR10A
ENST00000425761.1	FTH1 (ferritin, heavy polypeptide 1) (FTHL6) pseudogene
ENST00000416077.1	Wilms' tumour 1-associating protein (WTAP) (KIAA0105) pseudogene
ENST00000398713.3	ribosomal protein S15a (RPS15A) pseudogene
ENST00000454361.1	putative novel transcript
ENST00000650088.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000371117.8	MANE_select
ENST00000371117.8	polycystic kidney and hepatic disease 1 (autosomal recessive) (TIG multiple domains-1) (PKHD1)(FCYT, ARPKD)
ENST00000340994.4	polycystic kidney and hepatic disease 1 (autosomal recessive) (TIG multiple domains-1) (PKHD1)(FCYT, ARPKD)
ENST00000418518.2	novel transcript
ENST00000648244.1	LR annotation
ENST00000648244.1	MANE_select
ENST00000336123.5	Human Swiss-Prot Q96PD4.3
ENST00000336123.5	MANE_select
ENST00000336123.5	NP_443104.1
ENST00000408043.1	CACT (carnitine/acylcarnitine translocase) pseudogene
ENST00000596288.7	CAGE supported TSS
ENST00000596288.7	MANE_select
ENST00000596288.7	overlapping uORF
ENST00000596288.7	upstream ATG
ENST00000419835.8	NP_001257401
ENST00000419835.8	upstream ATG
ENST00000476448.1	novel transcript
ENST00000476448.1	this variant and variant 2 could be part of the same variant
ENST00000512121.1	alternative 5' UTR
ENST00000442253.3	MANE_select
ENST00000360726.3	alternative 5' UTR
ENST00000636489.1	alternative 5' UTR
ENST00000635866.1	alternative 3' UTR
ENST00000635812.1	alternative 3' UTR
ENST00000371068.11	MANE_select
ENST00000635843.1	NMD likely if extended
ENST00000636566.1	alternative 5' UTR
ENST00000638140.1	NMD likely if extended
ENST00000182527.4	MANE_select
ENST00000182527.4	TRAM-like protein (KIAA0057)
ENST00000606558.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666605.1	Assembled from SLRseq reads (SRP049776)
ENST00000666605.1	novel transcript
ENST00000663931.1	Assembled from SLRseq reads (SRP049776)
ENST00000666938.1	Assembled from SLRseq reads (SRP049776)
ENST00000658849.1	Assembled from SLRseq reads (SRP049776)
ENST00000662922.1	Assembled from SLRseq reads (SRP049776)
ENST00000606714.6	Assembled from SLRseq reads (SRP049776)
ENST00000667019.1	Assembled from SLRseq reads (SRP049776)
ENST00000664753.1	Assembled from SLRseq reads (SRP049776)
ENST00000667402.1	Assembled from SLRseq reads (SRP049776)
ENST00000664404.1	Assembled from SLRseq reads (SRP049776)
ENST00000653877.1	Assembled from SLRseq reads (SRP049776)
ENST00000653743.1	Assembled from SLRseq reads (SRP049776)
ENST00000605910.2	Assembled from SLRseq reads (SRP049776)
ENST00000453216.2	Assembled from SLRseq reads (SRP049776)
ENST00000657776.1	Assembled from SLRseq reads (SRP049776)
ENST00000644242.1	non canonical polymorphism
ENST00000211314.5	MANE_select
ENST00000211314.5	PTD011 protein
ENST00000404253.1	glutathione S-transferase pseudogene
ENST00000438425.1	Glutathione S-transferase Alpha 1 (GSTA1) pseudogene
ENST00000493422.3	MANE_select
ENST00000493422.3	glutathione S-transferase A2
ENST00000402398.1	glutathione S-transferase pseudogene
ENST00000334575.6	MANE_select
ENST00000334575.6	glutathione S-transferase A1
ENST00000493331.5	glutathione S-transferase A1
ENST00000476213.1	glutathione S-transferase A1
ENST00000424144.2	glutathione S-transferase A (GSTA) family pseudogene
ENST00000475052.1	novel glutathione S-transferase A (GSTA) family member
ENST00000452866.1	glutathione S-transferase A (GSTA) family pseudogene
ENST00000412182.1	glutathione S-transferase A (GSTA) family pseudogene
ENST00000370968.5	glutathione S-transferase A3
ENST00000211122.4	MANE_select
ENST00000211122.4	glutathione S-transferase A3
ENST00000431899.2	glutathione S-transferase A3
ENST00000431899.2	non canonical TEC
ENST00000406231.1	glutathione S-transferase A family pseudogene
ENST00000486559.5	glutathione S-transferase A4
ENST00000370963.9	Continued_from dJ132F22.1 in Em:AL162581
ENST00000370963.9	MANE_select
ENST00000370963.9	glutathione S-transferase A4
ENST00000477599.5	glutathione S-transferase A4
ENST00000370960.5	glutathione S-transferase A4
ENST00000370959.1	glutathione S-transferase A4
ENST00000457564.1	glutathione S-transferase A4
ENST00000676107.1	Continued_from dJ341E18.1 in Em:AL031178
ENST00000676107.1	Continues_as dJ132F22.2 in Em:AL162581
ENST00000676107.1	KIAA0936 (MAK-related kinase)
ENST00000676107.1	MAK-related kinase (KIAA0936)
ENST00000676107.1	MANE_select
ENST00000498744.5	alternative 5' UTR
ENST00000498744.5	non canonical conserved
ENST00000370939.7	non canonical conserved
ENST00000323557.12	F-box only protein 9 (FBX9,NY-REN-57)
ENST00000323557.12	MANE_select
ENST00000323557.12	non canonical conserved
ENST00000461222.1	confirm experimentally
ENST00000473337.6	alternative 5' UTR
ENST00000473337.6	confirm experimentally
ENST00000473337.6	non canonical conserved
ENST00000244426.10	F-box only protein 9 (FBX9,NY-REN-57)
ENST00000244426.10	non canonical conserved
ENST00000480463.6	QC splicing correct
ENST00000480463.6	non canonical conserved
ENST00000259803.8	MANE_select
ENST00000259803.8	glial cells missing homolog (Drosophila)
ENST00000407803.1	superoxide dismutase (SOD) pseudogene
ENST00000394808.2	CHC1 pseudogene
ENST00000402555.2	high mobility group protein pseudogene
ENST00000304434.11	MANE_select
ENST00000304434.11	homolog of yeast long chain polyunsaturated fatty acid elongation enzyme 2 (HELO1)
ENST00000485336.5	novel transcript
ENST00000465983.5	novel transcript
ENST00000486973.1	novel transcript
ENST00000370913.5	novel protein
ENST00000406501.1	40S Ribosomal protein S16 (RPS16) pseudogene
ENST00000406329.1	60S Ribosomal protein L31 (RPL31) pseudogene
ENST00000402839.1	replication protein A3 (RPA3) pseudogene
ENST00000509541.5	CAGE supported TSS
ENST00000650454.1	CAGE supported TSS
ENST00000650454.1	LR annotation
ENST00000650454.1	MANE_select
ENST00000616923.5	CAGE supported TSS
ENST00000616923.5	upstream ATG
ENST00000513939.6	NP_001184044.1
ENST00000505197.1	alternative 5' UTR
ENST00000508884.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655377.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668029.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659393.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448327.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000448327.2	novel transcript
ENST00000370905.4	MANE_select
ENST00000370905.4	genebuild_only_MANE
ENST00000407079.1	novel protein with BTB/POZ (broad complex Tramtrack bric-a-brac/Pox virus and zinc finger) domain
ENST00000657329.1	Assembled from SLRseq reads (SRP049776)
ENST00000666996.1	Assembled from SLRseq reads (SRP049776)
ENST00000453790.1	novel transcript
ENST00000648812.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000661706.1	Assembled from SLRseq reads (SRP049776)
ENST00000662688.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000429053.1	novel transcript
ENST00000370888.6	MANE_select
ENST00000460844.6	alternative 5' UTR
ENST00000502396.6	MANE_select
ENST00000434196.2	putative novel transcript
ENST00000441845.1	novel transcript
ENST00000402323.2	enhancer of rudimentary homolog (Drosophila)(ERH) pseudogene
ENST00000658743.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000486436.1	novel transcript
ENST00000370869.7	tubulointerstitial nephritis antigen
ENST00000259782.9	MANE_select
ENST00000259782.9	tubulointerstitial nephritis antigen
ENST00000370864.3	tubulointerstitial nephritis antigen
ENST00000421465.2	putative novel transcript
ENST00000435954.2	similar to CLNS1B (chloride channel, nucleotide-sensitive, 1B)
ENST00000403509.1	RPL10 (ribosomal protein L10) pseudogene
ENST00000406712.1	LAMR1 (laminin receptor 1, ribosomal protein SA) pseudogene
ENST00000407852.2	Transforming protein P21A (K-RAS) (C-K-RAS) pseudogene
ENST00000407852.2	part of the transforming protein P21A (K-RAS) (C-K-RAS) pseudogene
ENST00000425089.1	putative novel transcript
ENST00000306858.8	MANE_select
ENST00000306858.8	novel protein
ENST00000370862.4	MANE_select
ENST00000340465.2	MANE_select
ENST00000274901.9	MANE_select
ENST00000515546.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000515546.2	ID: align_id:3724414|asmbl_214579
ENST00000515546.2	SLR-seq_HsBN_lib8 : HsBN_lib8:Read_480634-Barcode=BC291:length=976, HsBN_lib8:Read_381640-Barcode=BC207:length=886, HsBN_lib8:Read_217702-Barcode=BC265:length=1513, HsBN_lib8:Read_51148-Barcode=BC084:length=1708, HsBN_lib8:Read_124883-Barcode=BC286:length=2345, HsBN_lib8:Read_336750-Barcode=BC016:length=599, HsBN_lib8:Read_85948-Barcode=BC027:length=1534 ; SLR-seq_HsBN_lib10 : HsBN_lib10:Read_98243-Barcode=BC024:length=1929, HsBN_lib10:Read_470267-Barcode=BC291:length=1105, HsBN_lib10:Read_279535-Barcode=BC036:length=962, HsBN_lib10:Read_321007-Barcode=BC142:length=524, HsBN_lib10:Read_149754-Barcode=BC231:length=1784, HsBN_lib10:Read_97075-Barcode=BC349:length=1511, HsBN_lib10:Read_490821-Barcode=BC282:length=981, HsBN_lib10:Read_392134-Barcode=BC306:length=1044 ; SLR-seq_HsBN_lib12 : HsBN_lib12:Read_357181-Barcode=BC201:length=1059, HsBN_lib12:Read_218226-Barcode=BC178:length=1647, HsBN_lib12:Read_68414-Barcode=BC224:length=1651, HsBN_lib12:Read_373086-Barcode=BC012:length=837, HsBN_lib12:Read_321032-Barcode=BC051:length=1314 ; SLR-seq_HsBN_lib7 : HsBN_lib7:Read_70484-Barcode=BC206:length=1580, HsBN_lib7:Read_243117-Barcode=BC009:length=1949, HsBN_lib7:Read_101460-Barcode=BC349:length=1806, HsBN_lib7:Read_12038-Barcode=BC019:length=1791, HsBN_lib7:Read_113806-Barcode=BC012:length=1890, HsBN_lib7:Read_461348-Barcode=BC184:length=652 ; SLR-seq_TB0000033 : TB0000033-DNA_A01-LRAAD-01:Read_104633-Barcode=BC157:length=2053, TB0000033-DNA_A01-LRAAD-01:Read_318839-Barcode=BC148:length=1380, TB0000033-DNA_A01-LRAAD-01:Read_266970-Barcode=BC022:length=1065 ; SLR-seq_TB0000032 : TB0000032-DNA_A01-LRAAD-01:Read_148303-Barcode=BC218:length=2070, TB0000032-DNA_A01-LRAAD-01:Read_312343-Barcode=BC118:length=1156, TB0000032-DNA_A01-LRAAD-01:Read_187522-Barcode=BC275:length=2068 ; SLR-seq_TB0000034 : TB0000034-DNA_A01-LRAAD-01:Read_61413-Barcode=BC089:length=2375, TB0000034-DNA_A01-LRAAD-01:Read_44945-Barcode=BC066:length=1706, TB0000034-DNA_A01-LRAAD-01:Read_414884-Barcode=BC344:length=1324, TB0000034-DNA_A01-LRAAD-01:Read_209362-Barcode=BC302:length=1979, TB0000034-DNA_A01-LRAAD-01:Read_329900-Barcode=BC148:length=600 ; SLR-seq_HsBN_lib6 : HsBN_lib6:Read_46742-Barcode=BC106:length=1707 ; SLR-seq_HsBN_lib9 : HsBN_lib9:Read_25221-Barcode=BC266:length=2075, HsBN_lib9:Read_471046-Barcode=BC054:length=1491, HsBN_lib9:Read_215581-Barcode=BC265:length=1850, HsBN_lib9:Read_136692-Barcode=BC102:length=1708, HsBN_lib9:Read_430142-Barcode=BC039:length=593, HsBN_lib9:Read_53945-Barcode=BC113:length=1759, HsBN_lib9:Read_97464-Barcode=BC362:length=1773 ; SLR-seq_HsBN_lib11 : HsBN_lib11:Read_368512-Barcode=BC131:length=1213, HsBN_lib11:Read_479102-Barcode=BC280:length=590, HsBN_lib11:Read_86055-Barcode=BC318:length=1754, HsBN_lib11:Read_23359-Barcode=BC304:length=1520 ; SLR-seq_TB0000035 : TB0000035-DNA_A01-LRAAD-01:Read_366836-Barcode=BC259:length=1405, TB0000035-DNA_A01-LRAAD-01:Read_298663-Barcode=BC090:length=657, TB0000035-DNA_A01-LRAAD-01:Read_1653-Barcode=BC003:length=1978, TB0000035-DNA_A01-LRAAD-01:Read_124502-Barcode=BC180:length=2004, TB0000035-DNA_A01-LRAAD-01:Read_298869-Barcode=BC090:length=622 ;
ENST00000405336.1	NIFU-like protein pseudogene
ENST00000370830.4	MANE_select
ENST00000370830.4	bone morphogenetic protein 5
ENST00000415681.1	nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1)(B23, NPM) pseudogene
ENST00000488912.5	non canonical conserved
ENST00000244728.10	MANE_select
ENST00000244728.10	non canonical conserved
ENST00000370819.5	non canonical conserved
ENST00000467045.5	collagen, type XXI, alpha 1
ENST00000461489.1	collagen, type XXI, alpha 1
ENST00000484987.1	collagen, type XXI, alpha 1
ENST00000469682.1	collagen, type XXI, alpha 1
ENST00000456983.1	collagen, type XXI, alpha 1
ENST00000370817.3	alternative 5' UTR
ENST00000401776.1	pseudogene similar to part of dihydrofolate reductase (DHFR)
ENST00000415663.1	putative novel transcript
ENST00000405832.2	KIAA1470 pseudogene
ENST00000680361.1	CAGE supported TSS
ENST00000680361.1	MANE_select
ENST00000340834.10	upstream ATG
ENST00000524186.1	CAGE supported TSS
ENST00000652573.1	CAGE supported TSS
ENST00000370765.11	CAGE supported TSS
ENST00000449297.6	confirm experimentally
ENST00000662493.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000426453.1	novel transcript
ENST00000370746.8	MANE_select
ENST00000370745.1	novel protein
ENST00000484701.1	novel transcript
ENST00000370733.5	MANE_select
ENST00000370733.5	novel protein
ENST00000488682.1	novel transcript
ENST00000370711.9	non canonical conserved
ENST00000370706.9	MANE_select
ENST00000509071.5	non canonical conserved
ENST00000648959.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000416069.6	novel transcript
ENST00000589263.6	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000609545.1	454 RNA-Seq supported
ENST00000370693.5	BCL2-associated athanogene 2
ENST00000370693.5	MANE_select
ENST00000468148.6	MANE_select
ENST00000468148.6	genebuild_only_MANE
ENST00000317483.4	member RAS oncogene family variant 1
ENST00000370687.6	alternative 5' UTR
ENST00000615550.5	MANE_select
ENST00000490313.1	sequence error
ENST00000649835.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000622616.1	not best-in-genome evidence
ENST00000665994.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653431.1	Assembled from SLRseq reads (SRP049776)
ENST00000635948.1	WD repeat-containing protein 70 (WDR70) pseudogene
ENST00000641671.1	ALIGN_ID:1961906|ASMBL_136543
ENST00000641671.1	novel transcript
ENST00000663799.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420759.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667471.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666162.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667148.1	Assembled from SLRseq reads (SRP049776)
ENST00000670654.1	Assembled from SLRseq reads (SRP049776)
ENST00000662791.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000641775.1	ALIGN_ID:1961955|ASMBL_136592
ENST00000666847.1	Assembled from SLRseq reads (SRP049776)
ENST00000670046.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654790.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671027.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668322.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000641631.1	ALIGN_ID:1961950|ASMBL_136587
ENST00000661843.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000457561.3	ALIGN_ID:1961922|ASMBL_136559
ENST00000662385.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000405826.1	proteasome subunit alpha type 4 (PROS29) pseudogene
ENST00000622562.1	not best-in-genome evidence
ENST00000511849.2	could be a splice variant of dJ240B8.1
ENST00000511849.2	novel transcript
ENST00000281156.5	KH domain containing, RNA binding, signal transduction associated 2
ENST00000281156.5	MANE_select
ENST00000658037.1	Assembled from SLRseq reads (SRP049776)
ENST00000370659.1	not best-in-genome evidence
ENST00000495602.2	LOC100128610
ENST00000370657.9	MANE_select
ENST00000370657.9	lengsin (EC 6.3.1.2) (LGS)
ENST00000402043.2	hypothetical protein PRO1855 pseudogene
ENST00000470661.1	novel transcript
ENST00000473334.1	novel transcript
ENST00000370651.7	NMD exception
ENST00000262043.8	MANE_select
ENST00000262043.8	PHD finger protein 3
ENST00000494284.6	novel transcript
ENST00000503581.6	MANE_select
ENST00000398580.3	not organism-supported
ENST00000406535.1	pseudogene similar to part of platelet-activating factor acetylhydrolase variant I alpha subunit (45kD) (PAFAH1B1)(LIS1, MDCR, PAFAHb)
ENST00000429530.1	putative novel transcript
ENST00000404096.1	pseudogene similar to part of glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase) (GCNT1)(G6NT, C2GNT, NACGT2, NAGCT2, C2GNT-L)
ENST00000424274.1	novel transcript
ENST00000433531.1	putative novel transcript
ENST00000402154.1	DKFZP564K1964 protein pseudogene
ENST00000398578.2	KIAA0663 pseudogene
ENST00000657794.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652869.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662821.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658972.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663640.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660755.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660756.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667200.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654364.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670870.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666873.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658272.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661172.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661401.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653528.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647954.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000660461.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660159.1	Assembled from SLRseq reads (SRP049776)
ENST00000662357.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449928.1	putative novel transcript
ENST00000664352.1	Assembled from SLRseq reads (SRP049776)
ENST00000445346.1	putative novel transcript
ENST00000654495.1	Assembled from SLRseq reads (SRP049776)
ENST00000657302.1	Assembled from SLRseq reads (SRP049776)
ENST00000669267.1	Assembled from SLRseq reads (SRP049776)
ENST00000663846.1	Assembled from SLRseq reads (SRP049776)
ENST00000663846.1	novel transcript
ENST00000662142.1	Assembled from SLRseq reads (SRP049776)
ENST00000659045.1	Assembled from SLRseq reads (SRP049776)
ENST00000650249.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000658609.1	Assembled from SLRseq reads (SRP049776)
ENST00000603261.2	Assembled from SLRseq reads (SRP049776)
ENST00000658040.1	Assembled from SLRseq reads (SRP049776)
ENST00000419979.2	Assembled from SLRseq reads (SRP049776)
ENST00000667769.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000370598.6	MANE_select
ENST00000370598.6	brain-specific angiogenesis inhibitor 3
ENST00000651675.1	alternative 3' UTR
ENST00000649934.3	CAGE supported TSS
ENST00000649934.3	LR annotation
ENST00000649934.3	MANE_select
ENST00000649679.1	CAGE supported TSS
ENST00000370570.6	CAGE supported TSS
ENST00000648168.1	CAGE supported TSS
ENST00000649918.1	CAGE supported TSS
ENST00000649918.1	upstream uORF
ENST00000650124.1	novel protein
ENST00000650107.1	CAGE supported TSS
ENST00000650107.1	upstream uORF
ENST00000647964.1	upstream uORF
ENST00000648394.1	CAGE supported TSS
ENST00000648743.1	CAGE supported TSS
ENST00000647669.1	CAGE supported TSS
ENST00000620364.5	MANE_select
ENST00000620364.5	NP_001849
ENST00000357250.11	MANE_select
ENST00000357250.11	NP_001842.3
ENST00000662517.1	Assembled from SLRseq reads (SRP049776)
ENST00000671572.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418403.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418403.2	novel transcript
ENST00000667898.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000515323.5	alternative 5' UTR
ENST00000418814.7	MANE_select
ENST00000515280.5	alternative 5' UTR
ENST00000507085.5	alternative 5' UTR
ENST00000468640.1	novel transcript
ENST00000370474.4	MANE_select
ENST00000370474.4	novel protein
ENST00000454078.1	spermine synthase (SMS) pseudogene
ENST00000404247.1	solute carrier family 25, mitochondrial carrier, adenine nucleotide translocator, member 6 (SLC25A6) pseudogene
ENST00000370452.7	novel protein, variant 4 (FLJ13159)
ENST00000316999.9	stromal membrane-associated protein (SMAP1), variant 5 (B)
ENST00000370455.8	MANE_select
ENST00000370455.8	stromal membrane-associated protein (SMAP1), variant 1 (A)
ENST00000370455.8	stromal membrane-associated protein (SMAP1, variant 1 (A)
ENST00000445046.1	novel protein
ENST00000439432.1	novel protein
ENST00000404262.2	NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex 1, (8kD, SDAP) (NDUFAB1) pseudogene
ENST00000230053.11	MANE_select
ENST00000230053.11	beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) (GLCATS, KIAA1963)
ENST00000666097.1	Assembled from SLRseq reads (SRP049776)
ENST00000402650.1	lysophospholipase I (LYPLA1) pseudogene
ENST00000615921.4	HEHD27I02
ENST00000670368.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000370435.5	MANE_select
ENST00000650315.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000467503.1	novel transcript
ENST00000456795.1	putative novel transcript
ENST00000657420.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651660.1	FLJ13189
ENST00000624429.1	confirm experimentally
ENST00000431997.2	novel transcript
ENST00000663404.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654769.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649875.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000403583.1	mesenchymal stem cell protein DSC92 pseudogene
ENST00000405746.1	keratin 19 (KRT19) pseudogene
ENST00000406139.1	forkhead box H1 (FOXH1) pseudogene
ENST00000649228.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000664828.1	Assembled from SLRseq reads (SRP049776)
ENST00000370398.6	MANE_select
ENST00000445310.2	novel transcript
ENST00000445020.1	pseudogene similar to hypothetical proteins from various model organisms
ENST00000654657.1	Assembled from SLRseq reads (SRP049776)
ENST00000666538.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656650.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000429832.1	confirm experimentally
ENST00000370388.4	MANE_select
ENST00000370388.4	NP_001119535.1
ENST00000662430.1	Assembled from SLRseq reads (SRP049776)
ENST00000671298.1	Assembled from SLRseq reads (SRP049776)
ENST00000653052.1	Assembled from SLRseq reads (SRP049776)
ENST00000370370.4	MANE_select
ENST00000370367.4	MANE_select
ENST00000370359.6	MANE_select
ENST00000370336.5	MANE_select
ENST00000370315.4	MANE_select
ENST00000680833.1	align_id:3725289|asmbl_215454
ENST00000415954.6	NP_001116698.1
ENST00000681094.1	alternative 3' UTR
ENST00000680131.1	alternative 3' UTR
ENST00000680875.1	alternative 3' UTR
ENST00000681620.1	alternative 3' UTR
ENST00000681141.1	alternative 3' UTR
ENST00000445187.6	alternative 3' UTR
ENST00000680601.1	alternative 3' UTR
ENST00000679418.1	alternative 3' UTR
ENST00000681267.1	alternative 3' UTR
ENST00000680902.1	alternative 3' UTR
ENST00000680238.1	alternative 3' UTR
ENST00000681165.1	alternative 3' UTR
ENST00000679364.1	alternative 3' UTR
ENST00000679411.1	alternative 3' UTR
ENST00000498286.6	MANE_select
ENST00000442897.7	alternative 3' UTR
ENST00000680034.1	alternative 3' UTR
ENST00000522205.6	alternative 3' UTR
ENST00000680544.1	alternative 3' UTR
ENST00000680428.1	alternative 3' UTR
ENST00000679352.1	alternative 3' UTR
ENST00000679870.1	alternative 3' UTR
ENST00000524046.2	alternative 3' UTR
ENST00000681438.1	alternative 3' UTR
ENST00000681337.1	alternative 3' UTR
ENST00000680794.1	alternative 3' UTR
ENST00000680758.1	alternative 3' UTR
ENST00000679591.1	alternative 3' UTR
ENST00000680841.1	alternative 3' UTR
ENST00000680563.1	alternative 3' UTR
ENST00000676547.1	align_id:3725303|asmbl_215468
ENST00000316292.13	NP_001393.1
ENST00000309268.11	MANE_select
ENST00000309268.11	alternative 5' UTR
ENST00000309268.11	variant 9; alternatively spliced in 5' UTR
ENST00000615060.5	alternative 5' UTR
ENST00000678508.1	alternative 5' UTR
ENST00000676710.1	alternative 5' UTR
ENST00000331523.7	alternative 5' UTR
ENST00000331523.7	variant 4; alternatively spliced in 5' UTR
ENST00000356303.7	alternative 5' UTR
ENST00000455918.2	alternative 5' UTR
ENST00000455918.2	eukaryotic translation elongation factor 1 alpha 1
ENST00000677236.1	alternative 5' UTR
ENST00000678702.1	alternative 5' UTR
ENST00000495333.6	eukaryotic translation elongation factor 1 alpha 1
ENST00000355773.6	MANE_select
ENST00000355773.6	solute carrier family 17 (anion/sugar transporter), member 5
ENST00000481996.1	solute carrier family 17 (anion/sugar transporter), member 5
ENST00000402023.1	ribosomal S27 protein pseudogene
ENST00000287097.6	CD109
ENST00000287097.6	MANE_select
ENST00000649530.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000474094.1	novel transcript
ENST00000406296.1	thioredoxin (TXN) pseudogene
ENST00000435946.1	novel transcript
ENST00000404728.1	novel FLJ14668 containing pseudogene
ENST00000658108.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668767.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000421318.1	putative novel transcript
ENST00000406203.1	nucleoporin 50kD (NUP50) (NPAP60, NPAP60L) pseudogene
ENST00000322507.13	MANE_select
ENST00000416123.6	confirm experimentally
ENST00000419671.1	not organism-supported
ENST00000370081.6	NP_001856.2
ENST00000370089.6	alternative 5' UTR
ENST00000230461.11	MANE_select
ENST00000674151.1	alternative 5' UTR
ENST00000674151.1	upstream ATG
ENST00000518161.1	alternative 5' UTR
ENST00000438676.2	Assembled from SLRseq reads (SRP049776)
ENST00000438676.2	novel transcript
ENST00000655404.1	Assembled from SLRseq reads (SRP049776)
ENST00000657244.1	Assembled from SLRseq reads (SRP049776)
ENST00000661161.1	Assembled from SLRseq reads (SRP049776)
ENST00000657787.1	Assembled from SLRseq reads (SRP049776)
ENST00000607221.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000237172.12	MANE_select
ENST00000366304.3	high-mobility group (nonhistone chromosomal) protein 1 (HMG1)(HMG3, HMGB1) pseudogene
ENST00000440220.5	novel transcript
ENST00000609544.1	nested 454 RNA-Seq supported
ENST00000419709.1	novel transcript
ENST00000455530.1	novel transcript
ENST00000402607.2	H3 histone, family 3A (H3F3A)(H3F3, H3.3A) pseudogene
ENST00000447266.7	MANE_select
ENST00000436928.7	confirm experimentally
ENST00000369985.9	CAGE supported TSS
ENST00000369985.9	LR annotation
ENST00000369977.8	MANE_select
ENST00000369977.8	myosin VI (DFNA22, KIAA0389)
ENST00000662603.1	alternative 5' UTR
ENST00000653423.1	alternative 5' UTR
ENST00000672093.1	KY781827.1
ENST00000430435.1	Myosin VI
ENST00000430435.1	this variant and variant 4 could be part of the same variant
ENST00000369950.8	Interphotoreceptor matrix proteoglycan 1
ENST00000369950.8	MANE_select
ENST00000369952.3	Interphotoreceptor matrix proteoglycan 1
ENST00000653622.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440811.1	Novel pseudogene
ENST00000669468.1	Assembled from RACEseq reads
ENST00000669724.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000369947.5	5-hydroxytryptamine (serotonin) receptor 1B (S12, HTR1D2, 5-HT1B, 5-HT1DB)
ENST00000369947.5	MANE_select
ENST00000602452.3	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000602452.3	ID: align_id:3725570|asmbl_215735
ENST00000602452.3	SLR-seq_TB0000034 : TB0000034-DNA_A01-LRAAD-01:Read_243528-Barcode=BC350:length=5281 ; SLR-seq_HsBN_lib6 : HsBN_lib6:Read_78619-Barcode=BC135:length=1669 ; SLR-seq_HsBN_lib9 : HsBN_lib9:Read_53228-Barcode=BC302:length=1677 ;
ENST00000449463.1	putative novel transcript
ENST00000430931.1	novel transcript
ENST00000369940.7	MANE_select
ENST00000275034.5	Continued_from bA477E3.1.1 in Em:AL356776
ENST00000275034.5	Continues_as bA173D14.2.1 in Em:AL450327
ENST00000275034.5	MANE_select
ENST00000275034.5	similar to WD40 repeat domain 11 protein (WDR11)
ENST00000479165.1	Continued_from bA477E3.1.2 in Em:AL356776
ENST00000479165.1	Continues_as bA173D14.2.2 in Em:AL450327
ENST00000479165.1	similar to WD40 repeat domain 11 protein (WDR11)
ENST00000406574.1	nucleoporin pseudogene
ENST00000344726.9	thyroid hormone receptor interactor 7
ENST00000275036.11	thyroid hormone receptor interactor 7
ENST00000406706.2	ribosomal protein S18 (RPS18) pseudogene
ENST00000444542.1	high-mobility group (nonhistone chromosomal) protein (HMG17) pseudogene
ENST00000653689.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653689.1	Assembled from SLRseq reads (SRP049776)
ENST00000653689.1	novel transcript
ENST00000429444.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653204.1	Assembled from SLRseq reads (SRP049776)
ENST00000654165.1	Assembled from SLRseq reads (SRP049776)
ENST00000652956.1	Assembled from SLRseq reads (SRP049776)
ENST00000401435.1	diazepam binding inhibitor (DBI) pseudogene
ENST00000369846.9	MANE_select
ENST00000467898.3	non canonical TEC
ENST00000671258.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000369838.6	MANE_select
ENST00000369838.6	SH3 domain binding glutamic acid-rich protein like 2
ENST00000669965.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438797.1	novel transcript
ENST00000649312.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000649312.1	CAGE supported TSS
ENST00000436418.1	putative novel transcript
ENST00000369816.5	MANE_select
ENST00000369816.5	elongation of very long chain fatty acids (FEN1/ELo2, SUR4/ELo3, yeast)-like 4 (ADMD, STGD3, STGD2)
ENST00000653117.1	Assembled from SLRseq reads (SRP049776)
ENST00000405405.2	GAPD (glyceraldehyde-3-phosphate dehydrogenase) pseudogene
ENST00000404414.1	RPL35A (60S ribosomal protein L35A) pseudogene
ENST00000509894.5	alternative 5' UTR
ENST00000369798.7	MANE_select
ENST00000502580.5	alternative 5' UTR
ENST00000511260.5	alternative 5' UTR
ENST00000504040.1	alternative 5' UTR
ENST00000404520.1	adenylate kinase 3 (AK3) pseudogene
ENST00000369760.8	branched chain keto acid dehydrogenase E1, beta polypeptide (maple syrup urine disease)
ENST00000356489.9	alternative 3' UTR
ENST00000356489.9	alternatively spliced 3' UTR; shares CDS with dJ279A18.1.1
ENST00000356489.9	branched chain keto acid dehydrogenase E1, beta polypeptide (maple syrup urine disease)
ENST00000320393.9	MANE_select
ENST00000486968.1	branched chain keto acid dehydrogenase E1, beta polypeptide (maple syrup urine disease)
ENST00000468520.1	not organism-supported
ENST00000491328.1	branched chain keto acid dehydrogenase E1, beta polypeptide (maple syrup urine disease)
ENST00000404330.1	60S ribosomal protein L17 (RPL17) (rpL23) pseudogene
ENST00000427048.7	Assembled from RACEseq reads
ENST00000656173.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656173.1	Assembled from SLRseq reads (SRP049776)
ENST00000452402.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452402.6	novel transcript
ENST00000648796.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000407020.1	laminin receptor 1 (67kD) (LAMR1) (Hs.75362, RPSA, LRP, p40, 37LRP) pseudogene
ENST00000326971.2	pituitary tumor-transforming 1 (PTTG1) pseudogene
ENST00000403828.1	citrate synthase (CS) pseudogene
ENST00000412306.1	novel protein
ENST00000320172.11	CAGE supported TSS
ENST00000320172.11	MANE_select
ENST00000320172.11	novel protein, variant 2 (FLJ20037)
ENST00000369754.7	CAGE supported TSS
ENST00000369754.7	novel protein, variant 1 (FLJ31495)
ENST00000369756.3	novel protein
ENST00000423467.1	not organism-supported
ENST00000435858.1	novel transcript
ENST00000614959.1	confirm experimentally
ENST00000457116.1	novel transcript
ENST00000402075.1	ribosomal protein L10 (RPL10) pseudogene
ENST00000441949.1	novel transcript
ENST00000667666.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658218.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665153.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418567.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418567.2	confirm experimentally
ENST00000666226.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668266.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660637.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668303.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663543.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660534.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000306270.12	MANE_select
ENST00000401636.1	single stranded DNA binding protein pseudogene
ENST00000661314.1	Assembled from SLRseq reads (SRP049776)
ENST00000369750.4	MANE_select
ENST00000369750.4	trophoblast glycoprotein (5T4-AG)
ENST00000369747.8	MANE_select
ENST00000369746.2	non canonical TEC
ENST00000403648.2	leucine aminopeptidase pseudogene
ENST00000451856.1	putative novel transcript
ENST00000604380.1	novel protein similar to C21ORF5 (KIAA0933)
ENST00000513973.6	CAGE supported TSS
ENST00000513973.6	LR annotation
ENST00000513973.6	MANE_select
ENST00000283977.9	non canonical TEC
ENST00000510258.1	alternative 5' UTR
ENST00000507554.1	alternative 5' UTR
ENST00000508748.5	alternative 5' UTR
ENST00000503094.1	alternative 5' UTR
ENST00000369724.5	MANE_select
ENST00000369724.5	novel protein
ENST00000369705.4	MANE_select
ENST00000369705.4	malic enzyme 1 (NADP(+)-dependent, cytosolic)
ENST00000403475.2	glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene
ENST00000369700.4	MANE_select
ENST00000195649.10	alternative 5' UTR
ENST00000439399.6	alternative 5' UTR
ENST00000521743.5	alternative 5' UTR
ENST00000369691.5	not organism-supported
ENST00000519779.5	alternative 5' UTR
ENST00000518309.6	alternative 5' UTR
ENST00000369690.6	alternative 5' UTR
ENST00000523484.6	alternative 5' UTR
ENST00000519825.5	alternative 5' UTR
ENST00000443471.2	novel transcript
ENST00000656981.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000369689.5	novel protein
ENST00000369687.2	novel protein
ENST00000369681.10	MANE_select
ENST00000479164.1	novel transcript
ENST00000420766.1	novel transcript
ENST00000444796.2	ID: align_id:3726054|asmbl_216219
ENST00000444796.2	SLR-seq_HsBN_lib8 : HsBN_lib8:Read_29038-Barcode=BC242:length=1755 ; SLR-seq_HsBN_lib12 : HsBN_lib12:Read_29546-Barcode=BC148:length=2131 ; SLR-seq_TB0000032 : TB0000032-DNA_A01-LRAAD-01:Read_156907-Barcode=BC231:length=2148, TB0000032-DNA_A01-LRAAD-01:Read_156487-Barcode=BC230:length=2308, TB0000032-DNA_A01-LRAAD-01:Read_228015-Barcode=BC333:length=1712 ; SLR-seq_TB0000034 : TB0000034-DNA_A01-LRAAD-01:Read_153082-Barcode=BC221:length=2048 ; SLR-seq_HsBN_lib9 : HsBN_lib9:Read_172438-Barcode=BC287:length=1703 ; SLR-seq_TB0000035 : TB0000035-DNA_A01-LRAAD-01:Read_280407-Barcode=BC042:length=856 ;
ENST00000444796.2	novel transcript
ENST00000257776.5	MANE_select
ENST00000257776.5	novel protein
ENST00000461137.5	FLJ13551
ENST00000257766.8	KIAA1009
ENST00000403245.8	MANE_select
ENST00000403245.8	NP_055710
ENST00000454981.5	novel transcript
ENST00000454172.5	novel transcript
ENST00000428896.1	novel transcript
ENST00000442896.1	SWI/SNF related, matrix associated, actindependent regulator of chromatin, subfamily e, member 1 (SMARCE1) (BAF57) pseudogene
ENST00000369663.10	MANE_select
ENST00000369663.10	T-box 18
ENST00000607343.1	not organism-supported
ENST00000589304.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658089.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658089.1	putative novel transcript
ENST00000441863.2	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000423086.2	putative novel transcript
ENST00000405071.1	pseudogene similar to part of cytochrome c oxidase subunit VIIa polypeptide 1 (muscle) (COX7A1) (COX7A COX7AM)
ENST00000660317.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000401925.1	novel pseudogene
ENST00000403057.1	pseudogene similar to part of hormonally upregulated Neu-associated kinase (HUNK)
ENST00000403365.1	ribosomal protein L31 (RPL31) pseudogene
ENST00000402742.1	karyopherin alpha 5 (importin alpha 6) (KPNA5) pseudogene
ENST00000434946.1	keratin 18 (KRT18) pseudogene
ENST00000455071.1	novel transcript (FLJ21345)
ENST00000406790.1	pseudogene similar to dUTP pyrophosphatase (DUT)
ENST00000458298.1	tumor protein, translationally-controlled 1 (TPT1) pseudogene
ENST00000257770.8	MANE_select
ENST00000369646.7	5'-nucleotidase, ecto (CD73)
ENST00000416334.5	5'-nucleotidase, ecto (CD73)
ENST00000437581.1	5'-nucleotidase, ecto (CD73)
ENST00000314673.8	MANE_select
ENST00000616122.5	align_id:3726189|asmbl_216354
ENST00000676637.1	align_id:3726146|asmbl_216311
ENST00000678528.1	align_id:3726156|asmbl_216321
ENST00000678528.1	alternative 5' UTR
ENST00000677481.1	align_id:3726205|asmbl_216370
ENST00000678878.1	align_id:3726180|asmbl_216345
ENST00000677771.1	NAGNAG splice site
ENST00000677771.1	align_id:3726188|asmbl_216353
ENST00000677646.1	align_id:3726200|asmbl_216365
ENST00000678618.1	align_id:1364043|asmbl_83946
ENST00000676630.1	align_id:1364042|asmbl_83945
ENST00000677059.1	align_id:1364041|asmbl_83944
ENST00000676542.1	align_id:3726192|asmbl_216357
ENST00000444272.2	align_id:3726152|asmbl_216317
ENST00000678899.1	align_id:3726170|asmbl_216335
ENST00000369622.8	MANE_select
ENST00000678816.1	align_id:3726203|asmbl_216368
ENST00000677514.1	align_id:3726201|asmbl_216366
ENST00000676688.1	align_id:3726185|asmbl_216350
ENST00000678355.1	align_id:3726186|asmbl_216351
ENST00000678930.1	align_id:3726204|asmbl_216369
ENST00000678589.1	align_id:3726206|asmbl_216371
ENST00000655847.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658383.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652832.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668100.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000623901.4	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656441.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659276.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657203.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659725.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000623163.4	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650155.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000666607.1	Assembled from SLRseq reads (SRP049776)
ENST00000661011.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661011.1	Assembled from SLRseq reads (SRP049776)
ENST00000658742.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658742.1	Assembled from SLRseq reads (SRP049776)
ENST00000658584.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658584.1	Assembled from SLRseq reads (SRP049776)
ENST00000661487.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666667.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666667.1	Assembled from SLRseq reads (SRP049776)
ENST00000665113.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665113.1	Assembled from SLRseq reads (SRP049776)
ENST00000623650.4	Assembled from SLRseq reads (SRP049776)
ENST00000671327.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671327.1	Assembled from SLRseq reads (SRP049776)
ENST00000622963.4	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000587692.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669160.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671650.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667637.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656092.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656092.1	Assembled from SLRseq reads (SRP049776)
ENST00000658077.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658077.1	Assembled from SLRseq reads (SRP049776)
ENST00000655116.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655116.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000655116.1	Assembled from SLRseq reads (SRP049776)
ENST00000670094.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670094.1	Assembled from SLRseq reads (SRP049776)
ENST00000654795.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658919.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660318.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000431043.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663073.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667693.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669413.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663448.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667421.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657339.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668505.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662914.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000420199.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659811.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664449.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665270.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669678.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664198.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658836.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655834.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000623910.4	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667289.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657398.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655881.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661360.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667545.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659484.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662245.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660580.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663133.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668512.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000369605.9	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670410.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665041.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664396.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000435947.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000414002.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000427501.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669824.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000453754.5	novel transcript
ENST00000658871.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000623001.4	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000428833.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666912.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660949.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667622.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670327.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000433843.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425170.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000405497.1	ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) pseudogene
ENST00000406187.1	pseudogene similar to part of heat shock 90kD protein 1, beta (HSPCB)
ENST00000407987.1	ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) pseudogene
ENST00000666191.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000403775.1	60S Ribosomal Protein L7 (RPL7) pseudogene
ENST00000401856.1	RAB1A, member RAS oncogene family (RAB1A) pseudogene
ENST00000472609.1	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 (13kD, B13) (NDUFA5) (B13, NUFM, UQOR13, FLJ12147, CI-13KD-B pseudogene
ENST00000404100.1	novel pseudogene
ENST00000407695.1	ribososmal protein L29 (RPL29) pseudogene
ENST00000402173.1	novel pseudogene
ENST00000305344.7	MANE_select
ENST00000437151.1	Similar to 60S ribosomal protein L7
ENST00000627148.3	MANE_select
ENST00000627148.3	glycoprotein hormones, alpha polypeptide
ENST00000610310.3	NP_001239312.1
ENST00000625577.1	alternative 5' UTR
ENST00000369577.8	MANE_select
ENST00000369577.8	NP_055836.1
ENST00000525899.6	MANE_select
ENST00000608353.5	alternative 5' UTR
ENST00000392863.6	MANE_select
ENST00000392863.6	genebuild_only_MANE
ENST00000608868.2	alternative 5' UTR
ENST00000388923.5	MANE_select
ENST00000369562.9	MANE_select
ENST00000480123.2	alternative 5' UTR
ENST00000403708.1	TAF13 RNA polymerase II, TATA box binding protei (TBP)-associated factor, 18kDa (TAF13) (TAF2K) pseudogene
ENST00000406493.1	S-adenosylmethionine decarboxylase 1 (AMD1) pseudogene
ENST00000401760.1	suppression of tumorigenicity 13 (colon carcinoma) (Hsp70-interacting protein) (ST13) (HIP) pseudogene
ENST00000464978.5	solute carrier family 35 (CMP-sialic acid transporter), member 1
ENST00000369552.9	MANE_select
ENST00000369536.10	MANE_select
ENST00000369536.10	novel protein similar to arginyl-tRNA synthetase (arginine-tRNA ligase, EC 6.1.1.19)
ENST00000493269.1	novel transcript
ENST00000497828.1	novel transcript
ENST00000451155.1	novel protein similar to arginyl-tRNA synthetase (arginine-tRNA ligase, EC 6.1.1.19)
ENST00000257789.4	Splice acceptor of exon 15 differs by 3 nt from that of variant 1
ENST00000392844.8	MANE_select
ENST00000478028.1	origin recognition complex, subunit 3-like (yeast)
ENST00000257787.6	MANE_select
ENST00000661132.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000237201.2	MANE_select
ENST00000237201.2	sperm acrosome associated 1 (SAMP32)
ENST00000462227.1	sperm acrosome associated 1 (SAMP32)
ENST00000462690.5	sperm acrosome associated 1 (SAMP32)
ENST00000369499.2	alternative 5' UTR
ENST00000549890.1	alternative 5' UTR
ENST00000549890.1	cannabinoid receptor 1 (brain) (CNR, Hs.75110) (variant a)
ENST00000428600.2	alternative 5' UTR
ENST00000551417.1	alternative 5' UTR
ENST00000648572.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000429137.1	non canonical conserved
ENST00000429137.1	putative novel transcript
ENST00000655924.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000669402.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656004.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000369485.9	MANE_select
ENST00000369472.1	proline rich 2 (proline-rich protein with nuclear targeting signal)
ENST00000336032.4	MANE_select
ENST00000336032.4	proline rich 2 (proline-rich protein with nuclear targeting signal)
ENST00000354922.3	proline rich 2 (proline-rich protein with nuclear targeting signal)
ENST00000452027.3	MANE_select
ENST00000452027.3	non canonical U12
ENST00000664569.1	Assembled from SLRseq reads (SRP049776)
ENST00000665193.1	Assembled from SLRseq reads (SRP049776)
ENST00000657573.1	Assembled from SLRseq reads (SRP049776)
ENST00000275072.5	MANE_select
ENST00000275072.5	novel protein similar to putative aminohydrolase
ENST00000454853.7	MANE_select
ENST00000454853.7	NP_002033.2
ENST00000402938.4	MANE_select
ENST00000402938.4	gamma-aminobutyric acid (GABA) receptor rho 2
ENST00000402938.4	upstream ATG
ENST00000435041.3	MANE_select
ENST00000435041.3	non-canonical ubiquitin conjugating enzyme 1
ENST00000369415.9	MANE_select
ENST00000369415.9	novel protein similar to rag C protein (GTR2)
ENST00000359203.3	novel protein similar to rag C protein (GTR2)
ENST00000492783.1	novel transcript
ENST00000339746.9	MANE_select
ENST00000369408.9	KIAA0957
ENST00000447838.6	CCDS47460.1
ENST00000520458.5	alternative 5' UTR
ENST00000465722.6	alternative 5' UTR
ENST00000523798.5	alternative 5' UTR
ENST00000522441.5	alternative 5' UTR
ENST00000522705.5	alternative 5' UTR
ENST00000479572.1	ankyrin repeat domain 6 (KIAA0957)
ENST00000523793.5	novel transcript
ENST00000523377.2	MANE_select
ENST00000523377.2	novel transcript
ENST00000369393.8	MANE_select
ENST00000439638.1	fragments dJ122O8.3, dJ122O8.4, dJ122O8.5 and dJ122O8.6  belong to the same gene; intervening exon structure yet to be determined
ENST00000439638.1	midasin homolog (yeast)(KIAA0301)
ENST00000438877.1	putative novel transcript
ENST00000552401.5	alternative 5' UTR
ENST00000419040.6	alternative 5' UTR
ENST00000547893.5	alternative 5' UTR
ENST00000551025.4	alternative 5' UTR
ENST00000551025.4	suspected genomic sequencing error affecting CDS between exons 9 and 10
ENST00000237177.10	sequence error
ENST00000237177.10	suspected genomic sequencing error affecting CDS between exons 9 and 10
ENST00000548224.2	sequence error
ENST00000548224.2	suspected genomic sequencing error affecting CDS between exons 7 and 8
ENST00000369352.1	MANE_select
ENST00000369352.1	connexin 62 (CX62)
ENST00000458201.1	novel transcript
ENST00000257749.9	5' UTR
ENST00000257749.9	BTB and CNC homology 1, basic leucine zipper transcription factor 2
ENST00000257749.9	MANE_select
ENST00000343122.7	5' UTR
ENST00000343122.7	BTB and CNC homology 1, basic leucine zipper transcription factor 2
ENST00000481150.1	BTB and CNC homology 1, basic leucine zipper transcription factor 2
ENST00000406998.6	5' UTR
ENST00000406998.6	BTB and CNC homology 1, basic leucine zipper transcription factor 2
ENST00000453877.5	5' UTR
ENST00000453877.5	BTB and CNC homology 1, basic leucine zipper transcription factor 2
ENST00000470301.5	5' UTR
ENST00000470301.5	BTB and CNC homology 1, basic leucine zipper transcription factor 2
ENST00000493201.5	5' UTR
ENST00000493201.5	BTB and CNC homology 1, basic leucine zipper transcription factor 2
ENST00000472023.5	5' UTR
ENST00000472023.5	BTB and CNC homology 1, basic leucine zipper transcription factor 2
ENST00000494747.2	5' UTR
ENST00000494747.2	BTB and CNC homology 1, basic leucine zipper transcription factor 2
ENST00000413986.1	putative novel transcript
ENST00000445838.1	putative novel transcript
ENST00000662649.1	Assembled from SLRseq reads (SRP049776)
ENST00000667364.1	Assembled from SLRseq reads (SRP049776)
ENST00000663503.1	Assembled from SLRseq reads (SRP049776)
ENST00000654016.1	Assembled from SLRseq reads (SRP049776)
ENST00000671229.1	Assembled from SLRseq reads (SRP049776)
ENST00000650187.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000369325.7	mitogen-activated protein kinase kinase kinase 7 (TGF-beta activated kinase 1c (TAK1)), variant 3 (1c)
ENST00000369327.7	mitogen-activated protein kinase kinase kinase 7 (TGF-beta activated kinase 1d (TAK1)), variant 4 (1d)
ENST00000369332.7	mitogen-activated protein kinase kinase kinase 7 (TGF-beta activated kinase 1 (TAK1)), variant 1 (1a)
ENST00000369332.7	mitogen-activated protein kinase kinase kinase 7 (TGF-beta activated kinase 1a (TAK1)), variant 1 (1a)
ENST00000369329.8	MANE_select
ENST00000369329.8	mitogen-activated protein kinase kinase kinase 7 (TGF-beta activated kinase 1b (TAK1)), variant 2 (1b)
ENST00000479630.1	mitogen-activated protein kinase kinase kinase 7
ENST00000369320.1	mitogen-activated protein kinase kinase kinase 7
ENST00000434493.1	novel transcript
ENST00000656997.1	Assembled from SLRseq reads (SRP049776)
ENST00000437768.1	novel transcript
ENST00000655239.1	Assembled from SLRseq reads (SRP049776)
ENST00000647772.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000661503.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000404689.2	novel transcript
ENST00000452624.1	novel transcript
ENST00000369303.9	MANE_select
ENST00000369303.9	ephrin receptor A7
ENST00000680190.1	upstream ATG
ENST00000369297.1	ephrin receptor A7
ENST00000668367.1	Assembled from SLRseq reads (SRP049776)
ENST00000670976.1	Assembled from SLRseq reads (SRP049776)
ENST00000424678.1	putative novel transcript
ENST00000424506.1	putative novel transcript
ENST00000358812.9	MANE_select
ENST00000358812.9	mandaselin (FLJ12838)
ENST00000369293.5	mandaselin
ENST00000474553.1	novel transcript
ENST00000668456.1	Assembled from SLRseq reads (SRP049776)
ENST00000658251.1	Assembled from SLRseq reads (SRP049776)
ENST00000654453.1	Assembled from SLRseq reads (SRP049776)
ENST00000302103.6	MANE_select
ENST00000483933.5	fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
ENST00000658843.1	Assembled from SLRseq reads (SRP049776)
ENST00000662501.1	Assembled from SLRseq reads (SRP049776)
ENST00000430796.1	non canonical TEC
ENST00000656359.1	Assembled from SLRseq reads (SRP049776)
ENST00000461673.1	novel transcript
ENST00000369278.5	MANE_select
ENST00000450218.5	LIM domains containing protein (activator of CREM in testis)
ENST00000450218.5	probably only alternatively spliced 5' UTR; shares translation with dJ393D12.2.1
ENST00000326771.2	LIM domains containing protein (activator of CREM in testis)
ENST00000442184.1	novel transcript
ENST00000229955.4	MANE_select
ENST00000316149.8	MANE_select
ENST00000369261.9	MANE_select
ENST00000369261.9	novel protein (KIAA1900)
ENST00000369254.5	novel protein (KIAA1900)
ENST00000447886.1	novel protein (KIAA1900)
ENST00000457513.2	CAGE supported TSS
ENST00000669069.1	Assembled from SLRseq reads (SRP049776)
ENST00000669069.1	CAGE supported TSS
ENST00000656098.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000574739.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000433637.2	CAGE supported TSS
ENST00000658994.1	Assembled from SLRseq reads (SRP049776)
ENST00000655619.1	Assembled from SLRseq reads (SRP049776)
ENST00000634677.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665158.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668451.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668451.1	CAGE supported TSS
ENST00000653817.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000635561.1	CAGE supported TSS
ENST00000661998.1	Assembled from SLRseq reads (SRP049776)
ENST00000668841.1	Assembled from SLRseq reads (SRP049776)
ENST00000665968.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665968.1	Assembled from SLRseq reads (SRP049776)
ENST00000666334.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417315.1	novel transcript
ENST00000654518.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667070.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667070.1	Assembled from SLRseq reads (SRP049776)
ENST00000659530.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659424.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661488.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665796.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664248.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664296.1	Assembled from SLRseq reads (SRP049776)
ENST00000661997.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668574.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662497.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654117.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659134.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653995.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664875.1	Assembled from SLRseq reads (SRP049776)
ENST00000661318.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670309.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655641.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665944.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671189.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671316.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654511.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659229.1	Assembled from SLRseq reads (SRP049776)
ENST00000607823.5	CAGE supported TSS
ENST00000670543.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671308.1	Assembled from SLRseq reads (SRP049776)
ENST00000657672.1	Assembled from SLRseq reads (SRP049776)
ENST00000666500.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659802.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658505.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657515.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652882.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432438.1	novel transcript
ENST00000328345.8	MANE_select
ENST00000369244.7	MANE_select
ENST00000389677.6	MANE_select
ENST00000254759.8	MANE_select
ENST00000369240.5	hexaprenyldihydroxybenzoate methyltransferase, mitochondrial precursor (COQ3)
ENST00000479163.1	hexaprenyldihydroxybenzoate methyltransferase, mitochondrial precursor (COQ3)
ENST00000369239.10	MANE_select
ENST00000369239.10	SR rich protein (FLJ14992)
ENST00000647811.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000681611.1	novel transcript
ENST00000460600.1	novel transcript
ENST00000478777.5	SR rich protein (FLJ14992)
ENST00000476159.1	novel transcript
ENST00000463021.1	novel transcript
ENST00000492294.5	novel transcript
ENST00000498075.1	novel transcript
ENST00000466057.1	novel transcript
ENST00000418945.2	putative novel transcript
ENST00000500704.7	MANE_select
ENST00000500704.7	alternative 5' UTR
ENST00000507717.5	NMD likely if extended
ENST00000329966.10	QC splicing correct
ENST00000472914.6	alternative 5' UTR
ENST00000508908.1	alternative 5' UTR
ENST00000452647.3	MANE_select
ENST00000520429.6	MANE_select
ENST00000520371.5	alternative 3' UTR
ENST00000523799.5	alternative 5' UTR
ENST00000523985.5	NP_001013417.1
ENST00000518714.5	alternative 3' UTR
ENST00000524049.5	alternative 5' UTR
ENST00000369215.5	MANE_select
ENST00000369215.5	NP_067633
ENST00000281806.7	CAGE supported TSS
ENST00000281806.7	MANE_select
ENST00000281806.7	alternative 5' UTR
ENST00000369212.2	G protein-coupled receptor slt (melanin-concentrating hormone 2) (SLT)
ENST00000664329.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670152.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655249.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663719.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000430122.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661108.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000452482.1	novel transcript
ENST00000369208.8	MANE_select
ENST00000411442.1	putative novel transcript
ENST00000369162.7	MANE_select
ENST00000369162.7	RNA helicase family (RNAH)
ENST00000324723.10	alternative 5' UTR
ENST00000369143.2	NP_071374.1
ENST00000369143.2	RNA helicase family (RNAH)
ENST00000369134.9	CAGE supported TSS
ENST00000369134.9	MANE_select
ENST00000369134.9	alternative 5' UTR
ENST00000669326.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000405705.1	Em:AP002530 : Homo sapiens genomic DNA, chromosome 6q21, anti-oncogene region, section 3/4
ENST00000405705.1	laminin receptor 1 (67kD, ribosomal protein SA) (LAMR1) pseudogene
ENST00000669348.1	Assembled from SLRseq reads (SRP049776)
ENST00000407015.1	ClpX caseinolytic protease X homolog (E. coli) pseudogene
ENST00000666428.1	Assembled from SLRseq reads (SRP049776)
ENST00000398310.3	nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1) (B23, NPM) pseudogene
ENST00000654628.1	Assembled from SLRseq reads (SRP049776)
ENST00000670325.1	Assembled from SLRseq reads (SRP049776)
ENST00000670498.1	Assembled from SLRseq reads (SRP049776)
ENST00000262903.9	MANE_select
ENST00000668527.1	Assembled from SLRseq reads (SRP049776)
ENST00000659952.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000345080.5	MANE_select
ENST00000345080.5	novel protein similar to FLJ12457
ENST00000345080.5	novel protein similar to FLJ12457,contains 'Cold-shock' DNA-binding domain
ENST00000314641.10	MANE_select
ENST00000314641.10	alternative 5' UTR
ENST00000336775.9	blood vessel epicardial substance (POP1, HBVES)
ENST00000446408.2	alternative 5' UTR
ENST00000661925.1	Assembled from SLRseq reads (SRP049776)
ENST00000653051.1	Assembled from SLRseq reads (SRP049776)
ENST00000662876.1	Assembled from SLRseq reads (SRP049776)
ENST00000663357.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653219.1	Assembled from SLRseq reads (SRP049776)
ENST00000648833.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000666385.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000654622.1	Assembled from SLRseq reads (SRP049776)
ENST00000664072.1	Assembled from SLRseq reads (SRP049776)
ENST00000656875.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655437.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000254765.4	MANE_select
ENST00000489134.5	popeye protein 3 (POP3)
ENST00000489134.5	popeye protein 3 (POP3), variant 3; alternatively spliced in 5'UTR
ENST00000474760.1	popeye protein 3 (POP3)
ENST00000652536.2	MANE_select
ENST00000652536.2	prolyl endopeptidase (PEP)
ENST00000448705.1	prolyl endopeptidase (PEP)
ENST00000452363.1	novel transcript (FLJ32396)
ENST00000669962.1	Assembled from SLRseq reads (SRP049776)
ENST00000663354.1	Assembled from SLRseq reads (SRP049776)
ENST00000423489.1	novel transcript
ENST00000654953.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000642235.1	CAGE supported TSS
ENST00000369096.9	MANE_select
ENST00000424894.1	alternative 5' UTR
ENST00000648754.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000343245.7	alternative 5' UTR
ENST00000343245.7	alternatively spliced 5' UTR; shares CDS with dJ354M18.1.1
ENST00000369076.8	MANE_select
ENST00000449180.1	putative novel transcript
ENST00000633556.3	CAGE supported TSS
ENST00000633556.3	MANE_select
ENST00000457437.1	absent in melanoma 1
ENST00000487681.1	absent in melanoma 1
ENST00000369063.8	MANE_select
ENST00000369063.8	reticulon 4 interacting protein 1 (NIMP)
ENST00000498091.1	reticulon 4 interacting protein 1 (NIMP)
ENST00000493619.1	reticulon 4 interacting protein 1 (NIMP)
ENST00000369046.8	MANE_select
ENST00000369046.8	novel protein similar to bacterial and Drosophila glutamyl-tRNA(GLN) amidotransferase subunit A
ENST00000467262.1	novel transcript
ENST00000369044.1	novel protein similar to bacterial and Drosophila glutamyl-tRNA(GLN) amidotransferase subunit A
ENST00000406094.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000424162.1	novel transcript
ENST00000669890.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000668203.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668203.1	novel transcript
ENST00000654718.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659907.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663790.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654576.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436659.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000436659.6	novel transcript, variant 6 (FLJ22314)
ENST00000665966.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671265.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653923.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671288.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655499.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662681.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655094.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655135.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665697.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000650222.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000653189.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000428750.6	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000418134.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418134.2	novel transcript
ENST00000659547.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671512.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671512.1	novel transcript
ENST00000670549.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670549.1	novel transcript
ENST00000664432.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653256.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656351.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671150.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667554.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670755.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669268.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658326.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000433965.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664142.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660557.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660557.1	novel transcript
ENST00000659564.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000415714.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000427903.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663403.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000602934.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000602934.3	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000657421.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661417.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660185.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000430094.1	novel transcript
ENST00000669428.1	Assembled from RACEseq reads
ENST00000311381.8	MANE_select
ENST00000405204.6	alternative 5' UTR
ENST00000625458.1	NP_001135942.1
ENST00000489790.1	novel transcript
ENST00000369042.6	MANE_select
ENST00000369037.9	MANE_select
ENST00000317357.10	MANE_select
ENST00000494935.1	novel transcript
ENST00000441532.5	novel transcript
ENST00000437040.1	novel transcript
ENST00000369020.8	MANE_select
ENST00000473515.5	FLJ00197
ENST00000369002.9	MANE_select
ENST00000193322.8	MANE_select
ENST00000658282.1	Assembled from SLRseq reads (SRP049776)
ENST00000368986.9	MANE_select
ENST00000230085.13	MANE_select
ENST00000368979.6	sorting nexin 3
ENST00000667578.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430458.1	NMD likely if extended
ENST00000368977.9	MANE_select
ENST00000659932.1	Assembled from SLRseq reads (SRP049776)
ENST00000406360.2	MANE_select
ENST00000406360.2	genebuild_only_MANE
ENST00000655744.1	Assembled from SLRseq reads (SRP049776)
ENST00000667858.1	Assembled from SLRseq reads (SRP049776)
ENST00000392644.9	MANE_select
ENST00000392644.9	NP_115507
ENST00000237512.4	alternative 5' UTR
ENST00000426737.1	putative novel transcript
ENST00000436639.6	p53 regulated PA26 nuclear protein (PA26-T1)
ENST00000302071.6	p53 regulated PA26 nuclear protein (PA26-T3)
ENST00000356644.7	p53 regulated PA26 nuclear protein (PA26-T2)
ENST00000519286.5	alternative 5' UTR
ENST00000518329.5	alternative 5' UTR
ENST00000522461.5	alternative 5' UTR
ENST00000518853.5	alternative 5' UTR
ENST00000524064.5	alternative 5' UTR
ENST00000522608.5	alternative 5' UTR
ENST00000517392.6	MANE_select
ENST00000521503.5	alternative 5' UTR
ENST00000522490.5	alternative 5' UTR
ENST00000523209.5	alternative 5' UTR
ENST00000453496.2	FLJ37396
ENST00000437739.1	ribosomal L7 (RPL7) pseudogene
ENST00000504373.2	LR 3' extension
ENST00000310786.10	LR annotation
ENST00000310786.10	MANE_select
ENST00000521072.7	MANE_select
ENST00000258052.8	MANE_select
ENST00000439615.1	sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)
ENST00000358807.8	MANE_select
ENST00000431946.1	alternative 5' UTR
ENST00000230122.4	MANE_select
ENST00000658720.1	Assembled from SLRseq reads (SRP049776)
ENST00000423747.2	novel transcript
ENST00000466992.1	FLJ42177
ENST00000532976.1	alternative 5' UTR
ENST00000675844.1	alternative 5' UTR
ENST00000674778.1	alternative 3' UTR
ENST00000675009.1	alternative 3' UTR
ENST00000675426.1	alternative 3' UTR
ENST00000675523.1	alternative 5' UTR
ENST00000675552.1	alternative 3' UTR
ENST00000674956.1	alternative 3' UTR
ENST00000674569.1	alternative 3' UTR
ENST00000230124.8	MANE_select
ENST00000674571.1	alternative 3' UTR
ENST00000675311.1	alternative 3' UTR
ENST00000674557.1	alternative 3' UTR
ENST00000675834.1	NMD likely if extended
ENST00000458693.1	may connect with dJ249I4.1
ENST00000275169.4	G protein-coupled receptor 6
ENST00000653781.1	Assembled from SLRseq reads (SRP049776)
ENST00000392589.6	MANE_select
ENST00000392589.6	genebuild_only_MANE
ENST00000392587.6	WAS protein family, member 1 (WASP family Verprolin-homologous protein, WAVE, SCAR1, WAVE1)
ENST00000392587.6	WAS protein family, member 1 (WASP family Verprolin-homologous protein, WAVE, SCAR1, WAVE1), variant 4; alternatively spliced in 5' UTR
ENST00000392586.5	WAS protein family, member 1 (WASP family Verprolin-homologous protein, WAVE, SCAR1, WAVE1, KIAA0269)
ENST00000392586.5	WAS protein family, member 1 (WASP family Verprolin-homologous protein, WAVE, SCAR1, WAVE1, KIAA0269), variant 1; alternatively spliced in 5' UTR
ENST00000444391.5	WAS protein family, member 1 (WASP family Verprolin-homologous protein, WAVE, SCAR1, WAVE1)
ENST00000444391.5	WAS protein family, member 1 (WASP family Verprolin-homologous protein, WAVE, SCAR1, WAVE1), variant 5; alternatively spliced in 5' UTR.
ENST00000265601.7	WAS protein family, member 1 (WASP family Verprolin-homologous protein, WAVE, SCAR1, WAVE1)
ENST00000265601.7	WAS protein family, member 1 (WASP family Verprolin-homologous protein, WAVE, SCAR1, WAVE1), variant 2; alternatively spliced in 5' UTR.
ENST00000368938.5	WAS protein family, member 1 (WASP family Verprolin-homologous protein, WAVE, SCAR1, WAVE1)
ENST00000368938.5	WAS protein family, member 1 (WASP family Verprolin-homologous protein, WAVE, SCAR1, WAVE1), variant 7; alternatively spliced in 5' UTR
ENST00000447287.5	WAS protein family, member 1 (WASP family Verprolin-homologous protein, WAVE, SCAR1, WAVE1)
ENST00000447287.5	WAS protein family, member 1 (WASP family Verprolin-homologous protein, WAVE, SCAR1, WAVE1), variant 6; alternatively spliced in 5' UTR.
ENST00000419252.1	WAS protein family, member 1 (WASP family Verprolin-homologous protein, WAVE, SCAR1, WAVE1)
ENST00000419252.1	WAS protein family, member 1 (WASP family Verprolin-homologous protein, WAVE, SCAR1, WAVE1), variant 3; alternatively spliced in 5' UTR.
ENST00000368932.5	pre-mRNA splicing factor 17 (PRP17, EH binding protein 3, EHB3, CDC40)
ENST00000368930.5	pre-mRNA splicing factor 17 (PRP17, EH binding protein 3, EHB3, CDC40)
ENST00000368930.5	pre-mRNA splicing factor 17 (PRP17, EHB3, EH-binding protein 3, CDC40)
ENST00000307731.2	MANE_select
ENST00000307731.2	genebuild_only_MANE
ENST00000453107.5	pre-mRNA splicing factor 17 (PRP17, EH binding protein 3, EHB3, CDC40)
ENST00000431461.1	pre-mRNA splicing factor 17 (PRP17, EH binding protein 3, EHB3, CDC40)
ENST00000490043.1	novel transcript
ENST00000666440.1	Assembled from SLRseq reads (SRP049776)
ENST00000368923.8	D-aspartate oxidase
ENST00000368923.8	upstream ATG
ENST00000479373.1	D-aspartate oxidase
ENST00000368924.9	D-aspartate oxidase
ENST00000368924.9	MANE_select
ENST00000368924.9	upstream ATG
ENST00000460159.1	alternative 3' UTR
ENST00000460159.1	alternatively spliced 3' UTR; shares partial CDS with dJ261K5.1.2
ENST00000460159.1	organic cation transporter OKB1
ENST00000460159.1	this variant and one or more of the other non-overlapping variant fragments could be part of a single variant
ENST00000451557.5	organic cation transporter OKB1
ENST00000368919.8	MANE_select
ENST00000434949.5	organic cation transporter OKB1
ENST00000437378.5	organic cation transporter OKB1
ENST00000424139.1	alternative 5' UTR
ENST00000424139.1	alternatively spliced 5' UTR; shares partial CDS with AC002464.1.5
ENST00000424139.1	organic cation transporter OKB1
ENST00000461487.1	organic cation transporter OKB1
ENST00000368911.8	MANE_select
ENST00000368911.8	novel protein kinase (KIAA1028)
ENST00000323817.7	alternative 5' UTR
ENST00000323817.7	alternatively spliced 5' UTR; shares CDS with dJ418A9.1.3
ENST00000323817.7	novel protein
ENST00000457688.5	alternative 5' UTR
ENST00000457688.5	alternatively spliced 5' UTR; shares CDS with dJ418A9.1.2
ENST00000457688.5	novel protein
ENST00000463016.1	novel protein
ENST00000460913.1	novel transcript
ENST00000468997.5	novel transcript
ENST00000497709.1	novel transcript
ENST00000406786.1	ribosomal protein S20 (RPS20) pseudogene
ENST00000401964.2	pseudogene similar to part of ribosomal protein L21 (RPL21)
ENST00000605131.1	disrupted by repeat
ENST00000368877.9	alternative 5' UTR
ENST00000329970.8	MANE_select
ENST00000329970.8	novel protein (FLJ25248)
ENST00000480191.1	novel transcript
ENST00000441448.7	MANE_select
ENST00000368851.10	MANE_select
ENST00000439288.5	solute carrier family 16 (monocarboxylic acid transporters), member 10 (TAT1, PRO0813, T-type amino acid transporter 1)
ENST00000465319.1	solute carrier family 16 (monocarboxylic acid transporters), member 10 (TAT1, PRO0813, T-type amino acid transporter 1)
ENST00000419619.2	solute carrier family 16 (monocarboxylic acid transporters), member 10 (TAT1, PRO0813, T-type amino acid transporter 1)
ENST00000425364.1	novel transcript
ENST00000672750.1	alternative 3' UTR
ENST00000671876.2	MANE_select
ENST00000671876.2	novel protein (KIAA1919)
ENST00000672191.1	alternative 3' UTR
ENST00000671883.1	alternative 3' UTR
ENST00000653951.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658925.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658925.2	Assembled from RACEseq reads
ENST00000654539.1	Assembled from SLRseq reads (SRP049776)
ENST00000660710.1	Assembled from RACEseq reads
ENST00000462119.5	DKFZp566H033
ENST00000368802.8	MANE_select
ENST00000368802.8	alternative 5' UTR
ENST00000661805.1	Assembled from SLRseq reads (SRP049776)
ENST00000368761.11	CAGE supported TSS
ENST00000368761.11	LR annotation
ENST00000368761.11	MANE_select
ENST00000368735.1	CAGE supported TSS
ENST00000368734.5	CAGE supported TSS
ENST00000368730.5	CAGE supported TSS
ENST00000464903.1	CAGE supported TSS
ENST00000651547.1	NMD likely if extended
ENST00000650859.1	alternative 5' UTR
ENST00000651359.1	alternative 5' UTR
ENST00000650649.1	alternative 5' UTR
ENST00000354650.7	MANE_select
ENST00000368667.6	alternative 5' UTR
ENST00000368678.8	alternative 5' UTR
ENST00000462856.6	alternative 5' UTR
ENST00000520518.5	alternative 5' UTR
ENST00000517419.5	alternative 5' UTR
ENST00000518295.5	alternative 5' UTR
ENST00000523238.5	alternative 5' UTR
ENST00000524310.5	alternative 5' UTR
ENST00000523574.5	alternative 5' UTR
ENST00000518630.5	alternative 5' UTR
ENST00000523570.5	alternative 5' UTR
ENST00000484067.6	alternative 5' UTR
ENST00000521062.5	alternative 5' UTR
ENST00000462598.7	alternative 5' UTR
ENST00000487824.2	alternative 5' UTR
ENST00000655782.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653948.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000368666.7	CAGE supported TSS
ENST00000368666.7	MANE_select
ENST00000368666.7	upstream ATG
ENST00000368662.10	MANE_select
ENST00000441191.5	tubulin, epsilon
ENST00000368656.7	MANE_select
ENST00000604268.1	alternative 5' UTR
ENST00000230538.12	MANE_select
ENST00000389463.9	CAGE supported TSS
ENST00000389463.9	LR annotation
ENST00000389463.9	alternative 5' UTR
ENST00000424408.6	alternative 5' UTR
ENST00000521398.5	alternative 5' UTR
ENST00000519932.5	alternative 5' UTR
ENST00000243219.7	alternative 5' UTR
ENST00000521690.1	alternative 5' UTR
ENST00000368638.5	CAGE supported TSS
ENST00000368638.5	LR annotation
ENST00000368638.5	NP_001098678.1
ENST00000453937.2	alternative 5' UTR
ENST00000455073.1	alternative 5' UTR
ENST00000425503.2	novel transcript
ENST00000433684.6	novel transcript
ENST00000585611.5	HEHD27I02FGUK7
ENST00000585611.5	RP11-506B6.6-008
ENST00000585611.5	evidence:psl_CRG_3prie_testis_97_98_99
ENST00000441065.3	MANE_select
ENST00000401872.1	laminin receptor 1 (67kD, ribosomal protein SA) (LAMR1)(RPSA) pseudogene
ENST00000667059.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446322.1	novel transcript
ENST00000418595.1	proliferation-associated 2G4, 38kD (PA2G4) pseudogene
ENST00000670062.1	Assembled from SLRseq reads (SRP049776)
ENST00000670412.1	Assembled from SLRseq reads (SRP049776)
ENST00000445974.1	novel transcript
ENST00000421737.1	putative novel transcript
ENST00000430728.1	putative novel transcript
ENST00000656121.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000415883.1	putative novel transcript
ENST00000649523.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000654213.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654213.1	putative novel transcript
ENST00000657627.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427157.1	putative novel transcript
ENST00000452675.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000612661.2	MANE_select
ENST00000434296.2	putative novel transcript
ENST00000670411.1	Assembled from SLRseq reads (SRP049776)
ENST00000658538.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000314481.3	No translation as would be subject to NMD
ENST00000519065.6	MANE_select
ENST00000519065.6	histone deacetylase 2 (human transcriptional regulator homolog RPD3, YAF1)
ENST00000519108.5	alternative 5' UTR
ENST00000425835.6	histone deacetylase 2 (human transcriptional regulator homolog RPD3, YAF1)
ENST00000523628.5	alternative 5' UTR
ENST00000521610.5	alternative 5' UTR
ENST00000522371.5	alternative 5' UTR
ENST00000518690.5	alternative 5' UTR
ENST00000523240.5	alternative 5' UTR
ENST00000520895.5	alternative 5' UTR
ENST00000524334.1	alternative 5' UTR
ENST00000438522.1	putative novel transcript
ENST00000446358.1	putative novel transcript
ENST00000435802.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435802.2	putative novel transcript
ENST00000652989.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656833.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446525.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446525.2	putative novel transcript
ENST00000666770.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000606080.2	MANE_select
ENST00000652856.1	Assembled from SLRseq reads (SRP049776)
ENST00000663064.1	Assembled from SLRseq reads (SRP049776)
ENST00000419791.3	novel protein
ENST00000319550.9	MANE_select
ENST00000460749.1	novel protein
ENST00000651968.1	MANE_select
ENST00000651968.1	genebuild_only_MANE
ENST00000327673.4	NP_000484
ENST00000327673.4	collagen, type X, alpha 1 (Schmid metaphyseal chondrodysplasia)
ENST00000452729.1	alternative 5' UTR
ENST00000452729.1	collagen, type X, alpha 1 (Schmid metaphyseal chondrodysplasia)
ENST00000418500.1	alternative 5' UTR
ENST00000418500.1	collagen, type X, alpha 1 (Schmid metaphyseal chondrodysplasia)
ENST00000457319.1	putative novel transcript
ENST00000420283.3	KIAA0721 (NAP (Nucleosome Assembly Protein) domain containing protein)
ENST00000420283.3	MANE_select
ENST00000647244.1	upstream uORF
ENST00000452085.7	alternative 5' UTR
ENST00000645988.1	alternative 5' UTR
ENST00000644252.3	LR annotation
ENST00000644252.3	MANE_select
ENST00000368608.4	MANE_select
ENST00000368608.4	TSPY-like (testis specific protein, Y-linked like)
ENST00000368608.4	start codon is derived from GENSCAN and FGENES predictions
ENST00000402326.1	chromobox homolog 3 (HP1 gamma homolog, Drosophila) (CBX3) pseudogene
ENST00000368605.3	MANE_select
ENST00000420595.2	putative novel transcript
ENST00000356128.4	novel protein (FLJ11180) (contains BET3 homology)
ENST00000368602.4	MANE_select
ENST00000437098.5	novel protein (contains BET3 homology)
ENST00000368599.4	MANE_select
ENST00000368590.9	PTD013 protein (CGI-24)
ENST00000368590.9	alternative 5' UTR
ENST00000487832.6	NP_057188.2
ENST00000487832.6	PTD013 protein (CGI-24)
ENST00000466444.7	MANE_select
ENST00000466444.7	PTD013 protein (CGI-24)
ENST00000518117.5	alternative 5' UTR
ENST00000468204.2	PTD013 protein (CGI-24)
ENST00000468204.2	alternative 5' UTR
ENST00000229554.10	MANE_select
ENST00000229554.10	novel protein similar to murine radial spokehead-like 1 (Rshl1)
ENST00000368580.4	novel protein similar to murine radial spokehead-like 1 (Rshl1)
ENST00000485498.1	novel transcript
ENST00000485498.1	this variant and variant fragment dJ412I7.3.3 could be part of one single variant
ENST00000368576.8	MANE_select
ENST00000368576.8	novel protein (FLJ30020)
ENST00000368573.5	novel protein
ENST00000471919.1	novel transcript
ENST00000471919.1	this variant and variant fragment dJ412I7.3.4 could be part of one single variant
ENST00000413340.5	karyopherin alpha 5 (importin alpha 6)
ENST00000413340.5	this variant and variant dJ412I7.2.3 could be part of one single variant
ENST00000413340.5	upstream ATG
ENST00000413340.5	upstream uORF
ENST00000356348.6	3' UTR
ENST00000356348.6	continued as bA86F4.2 in Em:AL354716
ENST00000356348.6	karyopherin alpha 5 (importin alpha 6)
ENST00000356348.6	this variant and variant dJ412I7.2.2 could be part of one single variant
ENST00000368564.7	MANE_select
ENST00000368564.7	karyopherin alpha 5 (importin alpha 6)
ENST00000368557.6	MANE_select
ENST00000368557.6	novel protein
ENST00000310357.8	MANE_select
ENST00000487683.5	novel RFX DNA binding domain containing protein
ENST00000332958.3	MANE_select
ENST00000332958.3	NP_775831
ENST00000471966.1	novel transcript
ENST00000666126.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000352536.7	novel protein (LOC245806)
ENST00000326274.6	MANE_select
ENST00000368507.8	MANE_select
ENST00000403284.2	v-ros UR2 sarcoma virus oncogene homolog 1 (avian) (MCF3, proto-oncogene tyrosine-protein kinase ROS, transmembrane tyrosine-specific protein kinase)
ENST00000467125.1	possible fusion transcript
ENST00000415736.1	putative novel transcript
ENST00000338728.10	MANE_select
ENST00000481630.1	novel transcript
ENST00000368498.7	MANE_select
ENST00000404786.1	novel pseudogene
ENST00000368494.4	MANE_select
ENST00000360388.9	MANE_select
ENST00000368491.8	MANE_select
ENST00000419517.2	NP_996804.2
ENST00000469424.1	bromodomain-containing 7 (BRD7) pseudogene
ENST00000357525.6	MANE_select
ENST00000357525.6	phospholamban (PLB)
ENST00000659521.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000619706.5	MANE_select
ENST00000619706.5	alternative 5' UTR
ENST00000619706.5	upstream ATG
ENST00000425154.6	alternative 5' UTR
ENST00000505446.1	alternative 5' UTR
ENST00000229595.6	MANE_select
ENST00000518570.2	ID: align_id:3728747|asmbl_218912
ENST00000338891.12	MANE_select
ENST00000338891.12	novel protein (contains FLJ13942)
ENST00000475529.7	ID: align_id:3728722|asmbl_218887
ENST00000475529.7	SLR-seq_HsBN_lib8 : HsBN_lib8:Read_1286-Barcode=BC257:length=1683 ; SLR-seq_HsBN_lib10 : HsBN_lib10:Read_456249-Barcode=BC043:length=1072 ; SLR-seq_HsBN_lib12 : HsBN_lib12:Read_401255-Barcode=BC115:length=587 ; SLR-seq_TB0000032 : TB0000032-DNA_A01-LRAAD-01:Read_55467-Barcode=BC083:length=1577 ; SLR-seq_TB0000034 : TB0000034-DNA_A01-LRAAD-01:Read_411145-Barcode=BC336:length=781, TB0000034-DNA_A01-LRAAD-01:Read_293564-Barcode=BC066:length=1121 ; SLR-seq_HsBN_lib6 : HsBN_lib6:Read_43947-Barcode=BC370:length=2659, HsBN_lib6:Read_167560-Barcode=BC083:length=2963 ; SLR-seq_HsBN_lib9 : HsBN_lib9:Read_286338-Barcode=BC036:length=746, HsBN_lib9:Read_485845-Barcode=BC078:length=885 ; SLR-seq_HsBN_lib11 : HsBN_lib11:Read_282376-Barcode=BC211:length=737 ;
ENST00000352896.9	NP_001093881.1
ENST00000521531.5	confirm experimentally
ENST00000368468.4	MANE_select
ENST00000368468.4	mannosidase, alpha, class 1A, member 1 (Man9-mannosidase (MAN9), HUMM9)
ENST00000368468.4	mannosidase, alpha, class 1A, member 1 (Man9-mannosidase) (MAN9, HUMM9)
ENST00000653388.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657887.1	Assembled from SLRseq reads (SRP049776)
ENST00000670096.1	Assembled from SLRseq reads (SRP049776)
ENST00000398197.6	non canonical conserved
ENST00000398212.7	MANE_select
ENST00000398212.7	confirm experimentally
ENST00000398212.7	non canonical conserved
ENST00000275159.10	confirm experimentally
ENST00000275159.10	non canonical conserved
ENST00000464622.5	non canonical conserved
ENST00000368464.7	non canonical conserved
ENST00000509492.2	non canonical conserved
ENST00000422369.1	alternative 5' UTR
ENST00000649003.1	alternative 5' UTR
ENST00000282561.4	CAGE supported TSS
ENST00000282561.4	LR annotation
ENST00000282561.4	MANE_select
ENST00000650427.1	alternative 5' UTR
ENST00000647564.1	alternative 5' UTR
ENST00000401679.2	cytochrome c oxidase subunit VIc (COX6C) pseudogene
ENST00000403062.2	pseudogene similar to Pleurodeles waltlii RAP55 protein and hypothetical proteins
ENST00000406327.2	high mobility group protein pseudogene
ENST00000368455.9	MANE_select
ENST00000339697.5	KIAA1253 protein (similar to tumor differentially expressed TDE1)
ENST00000339697.5	MANE_select
ENST00000368452.2	protein kinase (cAMP-dependent, catalytic) inhibitor beta (protein kinase, cAMP-dependent, catalytic, inhibitor 2 (PRKACN2)) (similar to FLJ23817)
ENST00000368448.1	protein kinase (cAMP-dependent, catalytic) inhibitor beta (protein kinase, cAMP-dependent, catalytic, inhibitor 2 (PRKACN2))
ENST00000354275.2	protein kinase (cAMP-dependent, catalytic) inhibitor beta (protein kinase, cAMP-dependent, catalytic, inhibitor 2 (PRKACN2))
ENST00000368446.1	protein kinase (cAMP-dependent, catalytic) inhibitor beta (protein kinase, cAMP-dependent, catalytic, inhibitor 2 (PRKACN2)) (similar to FLJ23817)
ENST00000658962.1	Assembled from SLRseq reads (SRP049776)
ENST00000657017.1	Assembled from SLRseq reads (SRP049776)
ENST00000660950.1	Assembled from SLRseq reads (SRP049776)
ENST00000368444.8	MANE_select
ENST00000368444.8	fatty acid binding protein 7, brain (B-FABP)
ENST00000356535.4	fatty acid binding protein 7, brain (B-FABP), variant 2 (DKFZp547J2313)
ENST00000368440.5	MANE_select
ENST00000487215.1	novel transcript
ENST00000440646.1	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g (ATP5L) pseudogene
ENST00000649113.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000275162.10	MANE_select
ENST00000334268.9	CAGE supported TSS
ENST00000334268.9	LR annotation
ENST00000334268.9	MANE_select
ENST00000361029.8	includes protein sequence similar to hypothetical protein from macaque
ENST00000361029.8	triadin (TDN, TRIADIN)
ENST00000422596.1	triadin (TDN, TRIADIN)
ENST00000587106.6	novel transcript
ENST00000669371.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669371.1	novel transcript
ENST00000418467.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000625262.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656482.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670687.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000427828.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000629087.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000434768.5	novel transcript
ENST00000668867.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655724.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000648704.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000654160.1	Assembled from SLRseq reads (SRP049776)
ENST00000650190.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000368417.6	Continued_from bA414G18.1.2 in Em:AL356605
ENST00000368417.6	MANE_select
ENST00000368417.6	T-cell lymphoma breakpoint associated target 1
ENST00000476571.1	T-cell lymphoma breakpoint associated target 1
ENST00000368416.5	T-cell lymphoma breakpoint associated target 1
ENST00000441521.1	novel transcript
ENST00000663792.1	Assembled from SLRseq reads (SRP049776)
ENST00000666728.1	Assembled from SLRseq reads (SRP049776)
ENST00000663732.1	Assembled from SLRseq reads (SRP049776)
ENST00000658682.1	Assembled from SLRseq reads (SRP049776)
ENST00000655205.1	Assembled from SLRseq reads (SRP049776)
ENST00000663550.1	Assembled from SLRseq reads (SRP049776)
ENST00000656500.1	Assembled from SLRseq reads (SRP049776)
ENST00000662961.1	Assembled from SLRseq reads (SRP049776)
ENST00000657116.1	Assembled from SLRseq reads (SRP049776)
ENST00000658379.1	Assembled from SLRseq reads (SRP049776)
ENST00000439075.1	novel transcript
ENST00000663982.1	Assembled from SLRseq reads (SRP049776)
ENST00000664507.1	Assembled from SLRseq reads (SRP049776)
ENST00000664931.1	Assembled from SLRseq reads (SRP049776)
ENST00000519799.5	alternative 5' UTR
ENST00000534368.5	alternative 5' UTR
ENST00000534000.6	MANE_select
ENST00000532429.5	NP_001003395.1
ENST00000534199.5	alternative 5' UTR
ENST00000524679.1	alternative 5' UTR
ENST00000398153.7	MANE_select
ENST00000318787.13	QC splicing correct
ENST00000661181.1	Assembled from SLRseq reads (SRP049776)
ENST00000422227.2	novel transcript
ENST00000655611.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655605.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662628.1	Assembled from SLRseq reads (SRP049776)
ENST00000430672.1	novel transcript
ENST00000656901.1	Assembled from SLRseq reads (SRP049776)
ENST00000427852.6	novel transcript
ENST00000451660.6	novel transcript
ENST00000432121.1	novel transcript
ENST00000423208.2	novel transcript
ENST00000670227.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000368365.5	hairy/enhancer-of-split related with YRPW motif 2 (GRL, HERP1, gridlock, HES-related repressor protein 1, CHF1)
ENST00000368364.4	MANE_select
ENST00000368364.4	hairy/enhancer-of-split related with YRPW motif 2 (GRL, HERP1, gridlock, HES-related repressor protein 1, CHF1)
ENST00000368357.7	endoplasmic reticulum associated protein 140 kDa (ERAP140) (similar to nucleolar protein C7B)
ENST00000453302.5	alternative 5' UTR
ENST00000453302.5	alternatively spliced 5' UTR; shares partial CDS with dJ293L8.4.1 and dJ185N19.1.1
ENST00000453302.5	endoplasmic reticulum associated protein 140 kDa (ERAP140) (similar to nucleolar protein C7B)
ENST00000417494.5	alternative 5' UTR
ENST00000417494.5	alternatively spliced 5' UTR; shares partial CDS with dJ293L8.4.1 and dJ185N19.1.1
ENST00000417494.5	endoplasmic reticulum associated protein 140 kDa (ERAP140) (similar to nucleolar protein C7B)
ENST00000392477.7	MANE_select
ENST00000392477.7	genebuild_only_MANE
ENST00000428318.1	alternative 5' UTR
ENST00000428318.1	alternatively spliced 5' UTR; shares partial CDS with dJ293L8.4.1 and dJ185N19.1.1
ENST00000428318.1	endoplasmic reticulum associated protein 140 kDa (ERAP140) (similar to nucleolar protein C7B)
ENST00000487635.1	novel transcript
ENST00000419660.1	alternative 5' UTR
ENST00000419660.1	alternatively spliced 5' UTR; shares partial CDS with dJ293L8.4.1 and dJ185N19.1.1
ENST00000419660.1	endoplasmic reticulum associated protein 140 kDa (ERAP140) (similar to nucleolar protein C7B)
ENST00000433571.2	novel protein
ENST00000438495.6	novel protein
ENST00000444128.2	novel protein
ENST00000429007.1	novel transcript
ENST00000229633.7	MANE_select
ENST00000229633.7	novel protein (FLJ32296) similar to protein kinase C inhibitors
ENST00000461129.5	novel transcript
ENST00000479748.5	MDS024 protein
ENST00000368332.7	MDS024 protein
ENST00000648977.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000468097.5	novel transcript
ENST00000334379.11	MANE_select
ENST00000473273.1	novel transcript
ENST00000473273.1	whether or not two of the non-overlapping partial variants are actually part of one multiple alternatively splice transcript is yet to be determined
ENST00000444121.5	MDS024 protein (fragment)
ENST00000444121.5	alternative 5' UTR
ENST00000444121.5	whether or not two of the non-overlapping partial variants are actually part of one multiple alternatively splice transcript is yet to be determined
ENST00000446681.1	MDS024 protein (fragment)
ENST00000446681.1	whether or not two of the non-overlapping partial variants are actually part of one multiple alternatively splice transcript is yet to be determined
ENST00000489934.1	non canonical TEC
ENST00000489934.1	novel transcript
ENST00000466316.1	non canonical TEC
ENST00000444229.1	putative novel transcript
ENST00000368328.5	MANE_select
ENST00000368328.5	novel protein
ENST00000368326.5	novel protein
ENST00000368325.5	novel protein
ENST00000405151.2	ribosomal protein S4, X-linked (cell cycle gene 2, single-copy abundant mRNA, ribosomal protein S4X variant, 40S ribosomal protein S4, X variant) (RPS4X)(CCG2, SCAR, SCR10, DXS306) pseudogene
ENST00000662897.1	Assembled from SLRseq reads (SRP049776)
ENST00000356698.9	MANE_select
ENST00000356698.9	thrombospondin (FLJ14440)
ENST00000368317.3	thrombospondin (FLJ14440)
ENST00000485757.1	thrombospondin (FLJ14440)
ENST00000609447.5	alternative 3' UTR
ENST00000356799.6	alternative 5' UTR
ENST00000368314.6	MANE_select
ENST00000609944.5	alternative 5' UTR
ENST00000610162.5	alternative 5' UTR
ENST00000489534.5	dactilydin (DKFZP434O1427)(FLJ14870, FLJ14530)
ENST00000610153.1	alternative 5' UTR
ENST00000608991.5	NP_112225.2
ENST00000480444.1	alternative 5' UTR
ENST00000531967.5	novel enoyl-CoA hydratase/isomerase family protein similar to uncharacterised hypothalamus protein HCDASE
ENST00000454859.8	MANE_select
ENST00000454859.8	alternative 5' UTR
ENST00000454859.8	novel enoyl-CoA hydratase/isomerase family protein similar to uncharacterised hypothalamus protein HCDASE
ENST00000474289.6	alternative 5' UTR
ENST00000474289.6	novel enoyl-CoA hydratase/isomerase family protein similar to uncharacterised hypothalamus protein HCDASE
ENST00000454591.6	NP_001099014.1
ENST00000454591.6	novel enoyl-CoA hydratase/isomerase family protein similar to uncharacterised hypothalamus protein HCDASE
ENST00000479525.6	novel enoyl-CoA hydratase/isomerase family protein similar to uncharacterised hypothalamus protein HCDASE
ENST00000368291.6	alternative 5' UTR
ENST00000368291.6	novel enoyl-CoA hydratase/isomerase family protein similar to uncharacterised hypothalamus protein HCDASE
ENST00000475319.1	novel enoyl-CoA hydratase/isomerase family protein similar to uncharacterised hypothalamus protein HCDASE
ENST00000430841.6	alternative 5' UTR
ENST00000430841.6	novel enoyl-CoA hydratase/isomerase family protein similar to uncharacterised hypothalamus protein HCDASE
ENST00000368289.6	NP_060949.2
ENST00000368289.6	novel enoyl-CoA hydratase/isomerase family protein similar to uncharacterised hypothalamus protein HCDASE
ENST00000368292.10	novel enoyl-CoA hydratase/isomerase family protein similar to uncharacterised hypothalamus protein HCDASE
ENST00000488087.1	novel enoyl-CoA hydratase/isomerase family protein similar to uncharacterised hypothalamus protein HCDASE
ENST00000436638.5	novel enoyl-CoA hydratase/isomerase family protein similar to uncharacterised hypothalamus protein HCDASE
ENST00000460558.5	novel enoyl-CoA hydratase/isomerase family protein similar to uncharacterised hypothalamus protein HCDASE
ENST00000461239.2	novel enoyl-CoA hydratase/isomerase family protein similar to uncharacterised hypothalamus protein HCDASE
ENST00000534442.5	alternative 5' UTR
ENST00000474240.1	novel enoyl-CoA hydratase/isomerase family protein similar to uncharacterised hypothalamus protein HCDASE
ENST00000531582.1	alternative 5' UTR
ENST00000368287.1	novel enoyl-CoA hydratase/isomerase family protein similar to uncharacterised hypothalamus protein HCDASE
ENST00000483725.8	MANE_select
ENST00000483725.8	confirm experimentally
ENST00000483725.8	novel protein (KIAA0408)
ENST00000465254.2	novel protein (KIAA0408)
ENST00000487331.2	novel protein (KIAA0408)
ENST00000464495.4	alternative 3' UTR
ENST00000474293.2	NMD likely if extended
ENST00000465909.2	not organism-supported
ENST00000467753.1	alternative 5' UTR
ENST00000498112.1	novel protein (LOC135121)
ENST00000329722.8	MANE_select
ENST00000403830.2	chromosome 6 open reading frame 58 (C6orf58) pseudogene
ENST00000630369.2	NP_001158157.1
ENST00000368226.9	MANE_select
ENST00000368226.9	protein tyrosine phosphatase, receptor type, K (R-PTP-KAPPA)
ENST00000368213.9	NP_001129120.1
ENST00000368210.7	protein tyrosine phosphatase, receptor type, K (R-PTP-KAPPA)
ENST00000368215.7	protein tyrosine phosphatase, receptor type, K (R-PTP-KAPPA)
ENST00000415046.6	protein tyrosine phosphatase, receptor type, K (R-PTP-KAPPA)
ENST00000415055.2	protein tyrosine phosphatase, receptor type, K (R-PTP-KAPPA)
ENST00000434424.5	may connect with other variants of this gene
ENST00000434424.5	protein tyrosine phosphatase, receptor type, K (R-PTP-KAPPA)
ENST00000368205.7	protein tyrosine phosphatase, receptor type, K (R-PTP-KAPPA)
ENST00000490332.2	not organism-supported
ENST00000498284.1	protein tyrosine phosphatase, receptor type, K (R-PTP-KAPPA)
ENST00000495748.5	protein tyrosine phosphatase, receptor type, K (R-PTP-KAPPA)
ENST00000429595.1	protein tyrosine phosphatase, receptor type, K (R-PTP-KAPPA)
ENST00000392449.4	protein tyrosine phosphatase, receptor type, K (R-PTP-KAPPA)
ENST00000368202.4	protein tyrosine phosphatase, receptor type, K (R-PTP-KAPPA)
ENST00000417390.1	continues as bA103C16.2 in Em:AL590006
ENST00000417390.1	novel transcript
ENST00000458367.1	putative novel transcript
ENST00000421865.3	MANE_select
ENST00000421865.3	laminin, alpha 2 (merosin, congenital muscular dystrophy) (LAMM)
ENST00000466230.1	novel transcript
ENST00000498257.5	novel transcript
ENST00000494137.1	novel transcript
ENST00000665046.1	Assembled from SLRseq reads (SRP049776)
ENST00000664071.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000657779.1	Assembled from SLRseq reads (SRP049776)
ENST00000659721.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668058.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670413.1	Assembled from SLRseq reads (SRP049776)
ENST00000430296.5	novel transcript
ENST00000668588.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662342.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667206.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667206.1	novel transcript
ENST00000660256.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419061.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000442449.1	putative novel transcript
ENST00000368149.3	MANE_select
ENST00000368149.3	MacGAP protein
ENST00000483367.5	novel transcript
ENST00000463225.1	novel transcript
ENST00000368143.6	MANE_select
ENST00000368143.6	novel protein
ENST00000674039.1	alternative 5' UTR
ENST00000361794.7	KIAA1798 protein
ENST00000361794.7	MANE_select
ENST00000361794.7	novel transcript (KIAA1798)
ENST00000528385.5	alternative 5' UTR
ENST00000368139.6	alternative 5' UTR
ENST00000526019.5	alternative 5' UTR
ENST00000659158.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000439090.7	MANE_select
ENST00000439090.7	alternative 5' UTR
ENST00000437477.6	alternative 5' UTR
ENST00000463253.2	not organism-supported
ENST00000531544.5	alternative 5' UTR
ENST00000296978.4	KIAA1913 protein
ENST00000296978.4	MANE_select
ENST00000541421.2	MANE_select
ENST00000528282.5	alternative 5' UTR
ENST00000337057.8	MANE_select
ENST00000368128.6	alternative 5' UTR
ENST00000527411.5	alternative 5' UTR
ENST00000525271.5	NP_001129027.1
ENST00000533912.1	not organism-supported
ENST00000525198.1	not organism-supported
ENST00000529709.1	alternative 5' UTR
ENST00000532499.1	alternative 5' UTR
ENST00000526983.1	alternative 5' UTR
ENST00000531356.1	alternative 5' UTR
ENST00000530707.1	alternative 5' UTR
ENST00000541650.5	NAGNAG splice site
ENST00000263050.3	not organism-supported
ENST00000469293.1	arginase, liver (ARG1)
ENST00000356962.2	arginase, liver (ARG1)
ENST00000275196.5	arginase, liver (ARG1)
ENST00000368087.8	CAGE supported TSS
ENST00000368087.8	LR annotation
ENST00000368087.8	MANE_select
ENST00000368087.8	arginase, liver (ARG1)
ENST00000498260.1	arginase, liver (ARG1)
ENST00000484820.1	arginase, liver (ARG1)
ENST00000354577.8	cofactor required for Sp1 transcriptional activation, subunit 3 (130kD) (CRSP130, CRSP133, DRIP130, SUR2, KIAA1216)
ENST00000368068.8	MANE_select
ENST00000368068.8	cofactor required for Sp1 transcriptional activation, subunit 3 (130kD) (CRSP130, CRSP133, DRIP130, SUR2, KIAA1216)
ENST00000479213.1	cofactor required for Sp1 transcriptional activation, subunit 3 (130kD) (CRSP130, CRSP133, DRIP130, SUR2, KIAA1216)
ENST00000368060.7	cofactor required for Sp1 transcriptional activation, subunit 3 (130kD) (CRSP130, CRSP133, DRIP130, SUR2, KIAA1216)
ENST00000368058.5	cofactor required for Sp1 transcriptional activation, subunit 3 (130kD) (CRSP130, CRSP133, DRIP130, SUR2, KIAA1216)
ENST00000484885.1	cofactor required for Sp1 transcriptional activation, subunit 3 (130kD) (CRSP130, CRSP133, DRIP130, SUR2, KIAA1216)
ENST00000368053.8	cofactor required for Sp1 transcriptional activation, subunit 3 (130kD) (CRSP130, CRSP133, DRIP130, SUR2, KIAA1216)
ENST00000489888.1	cofactor required for Sp1 transcriptional activation, subunit 3 (130kD) (CRSP130, CRSP133, DRIP130, SUR2, KIAA1216)
ENST00000414305.5	ectonucleotide pyrophosphatase/phosphodiesterase 3 (FLJ21246, B10, NPP3, PDNP3, CD203c, PD-IBETA)
ENST00000357639.8	MANE_select
ENST00000357639.8	genebuild_only_MANE
ENST00000423831.5	ectonucleotide pyrophosphatase/phosphodiesterase 3 (B10, NPP3, PDNP3, CD203c, PD-IBETA)
ENST00000470930.5	ectonucleotide pyrophosphatase/phosphodiesterase 3 (B10, NPP3, PDNP3, CD203c, PD-IBETA)
ENST00000494023.1	ectonucleotide pyrophosphatase/phosphodiesterase 3 (B10, NPP3, PDNP3, CD203c, PD-IBETA)
ENST00000315453.4	MANE_select
ENST00000315453.4	olfactory receptor family 2 (subfamily A member 4)
ENST00000314099.10	MANE_select
ENST00000314099.10	not best-in-genome evidence
ENST00000647893.1	LR annotation
ENST00000647893.1	MANE_select
ENST00000367976.4	MANE_select
ENST00000664107.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663205.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667763.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667512.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662166.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669461.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662967.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657473.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669653.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661280.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661099.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655844.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664113.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654779.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670122.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666560.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654106.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658894.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669240.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665843.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655558.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658258.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653266.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660939.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660058.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668744.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660563.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666171.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656169.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000443303.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436112.1	putative novel transcript
ENST00000447481.1	putative novel transcript
ENST00000367963.8	MANE_select
ENST00000367941.7	MANE_select
ENST00000426566.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000275200.1	G protein-coupled receptor 102 (TA5, TAR5)
ENST00000275198.1	MANE_select
ENST00000275198.1	trace amine receptor 4 (TA4)
ENST00000258034.3	novel transcript amine receptor (putative neurotransmitter receptor, PNR)
ENST00000454843.1	trace amine receptor pseudogene
ENST00000657559.1	Assembled from SLRseq reads (SRP049776)
ENST00000275191.2	Also used as evidence: mRNA AF112460 (1041bb, see PMID 10684976)
ENST00000275191.2	G protein-coupled receptor 58
ENST00000275191.2	Isoform also known as: Small;
ENST00000367931.1	G protein-coupled receptor 58
ENST00000367931.1	Isoform also known as: Long;
ENST00000367931.1	MANE_select
ENST00000275216.2	trace amine receptor 1 (TA1) (Tar1)
ENST00000367928.5	MANE_select
ENST00000367928.5	vanin 1
ENST00000406783.1	cyclin G1 (CCNG1) pseudogene
ENST00000414302.7	NMD exception
ENST00000367927.9	NMD exception
ENST00000673794.1	NMD exception
ENST00000509351.5	NMD exception
ENST00000417437.6	NMD exception
ENST00000423615.6	NMD exception
ENST00000423615.6	alternative 3' UTR
ENST00000427187.6	NMD exception
ENST00000275223.7	alternative 3' UTR
ENST00000519686.6	alternative 3' UTR
ENST00000392393.7	NAGNAG splice site
ENST00000392393.7	QC splicing correct
ENST00000674148.1	alternative 3' UTR
ENST00000450865.2	NMD exception
ENST00000544102.1	alternative 3' UTR
ENST00000418593.6	102894  102809
ENST00000326499.11	MANE_select
ENST00000326499.11	vanin 2
ENST00000422400.6	102976  102809
ENST00000525270.5	NP_511043.1
ENST00000524919.5	alternative 5' UTR
ENST00000530536.5	alternative 5' UTR
ENST00000532012.1	alternative 5' UTR
ENST00000430895.1	putative novel transcript
ENST00000275227.9	MANE_select
ENST00000650136.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000650278.1	CAGE supported TSS
ENST00000367918.1	NMD likely if extended
ENST00000367918.1	novel protein
ENST00000460518.1	novel protein
ENST00000230050.4	MANE_select
ENST00000230050.4	ribosomal protein S12
ENST00000670829.1	Assembled from SLRseq reads (SRP049776)
ENST00000670892.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000659399.1	Assembled from SLRseq reads (SRP049776)
ENST00000668229.1	Assembled from SLRseq reads (SRP049776)
ENST00000669115.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665546.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665546.1	novel transcript
ENST00000664900.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666914.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667586.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662971.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654682.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666729.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656106.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000434443.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656014.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670646.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655865.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664029.1	Assembled from SLRseq reads (SRP049776)
ENST00000669334.1	Assembled from SLRseq reads (SRP049776)
ENST00000670777.1	Assembled from SLRseq reads (SRP049776)
ENST00000355286.12	CAGE supported TSS
ENST00000355286.12	LR annotation
ENST00000355286.12	MANE_select
ENST00000412954.1	putative novel transcript
ENST00000457081.1	novel transcript
ENST00000666537.1	Assembled from SLRseq reads (SRP049776)
ENST00000607573.5	NAGNAG splice site
ENST00000419627.1	novel transcript
ENST00000607641.3	PMID: 25087872
ENST00000630119.2	PMID: 25087872
ENST00000626104.2	PMID: 25087872
ENST00000631362.2	PMID: 25087872
ENST00000630728.1	PMID: 25087872
ENST00000438283.1	heat shock 10kDa protein 1 (chaperonin 10) (HSPE1) pseudogene
ENST00000456347.5	novel transcript
ENST00000669925.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662850.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000412745.1	novel transcript
ENST00000367882.5	CAGE supported TSS
ENST00000367882.5	MANE_select
ENST00000367882.5	transcription factor 21 (POD1, transcription factor-21 (epicardin; podocyte-expressed 1))
ENST00000237316.3	alternative 3' UTR
ENST00000237316.3	alternative 3' UTR; shares CDS with bA373A10.1.1
ENST00000237316.3	transcription factor 21 (POD1, transcription factor-21 (epicardin; podocyte-expressed 1))
ENST00000416965.5	TBP-like 1 (TLF, TLP, STUD, TRF2)
ENST00000416965.5	alternative 5' UTR
ENST00000416965.5	alternatively spliced 5' UTR; shares partial CDS with dJ73H22.1.1
ENST00000457715.1	TBP-like 1 (TLF, TLP, STUD, TRF2)
ENST00000457715.1	alternative 5' UTR
ENST00000457715.1	alternatively spliced 5' UTR; shares partial CDS with dJ73H22.1.1
ENST00000367871.5	TBP-like 1 (TLF, TLP, STUD, TRF2)
ENST00000367869.1	TBP-like 1 (TLF, TLP, STUD, TRF2)
ENST00000367869.1	alternative 5' UTR
ENST00000367869.1	alternatively spliced 5' UTR; shares partial CDS with dJ73H22.1.1
ENST00000237264.9	MANE_select
ENST00000237264.9	TBP-like 1 (TLF, TLP, STUD, TRF2)
ENST00000477527.1	TBP-like 1 (TLF, TLP, STUD, TRF2)
ENST00000481694.1	TBP-like 1 (TLF, TLP, STUD, TRF2)
ENST00000275230.6	MANE_select
ENST00000275230.6	solute carrier family 2 (facilitated glucose transporter), member 12 (GLUT12, FLJ31992)
ENST00000663785.1	Assembled from SLRseq reads (SRP049776)
ENST00000367858.9	serum/glucocorticoid regulated kinase, variant 4 (FLJ30515)
ENST00000474427.6	serum/glucocorticoid regulated kinase
ENST00000474427.6	this variant fragment and one or more of the other non-overlapping variant fragments could be part of a single variant
ENST00000413996.7	serum/glucocorticoid regulated kinase
ENST00000477460.6	serum/glucocorticoid regulated kinase
ENST00000477460.6	this variant fragment and one or more of the other non-overlapping variant fragments could be part of a single variant
ENST00000237305.11	serum/glucocorticoid regulated kinase
ENST00000367857.9	serum/glucocorticoid regulated kinase
ENST00000473704.1	serum/glucocorticoid regulated kinase
ENST00000473704.1	this variant fragment and one or more of the other non-overlapping variant fragments could be part of a single variant
ENST00000489458.6	serum/glucocorticoid regulated kinase
ENST00000489458.6	this variant fragment and one or more of the other non-overlapping variant fragments could be part of a single variant
ENST00000475882.6	serum/glucocorticoid regulated kinase
ENST00000475882.6	this variant fragment and one or more of the other non-overlapping variant fragments could be part of a single variant
ENST00000490149.6	serum/glucocorticoid regulated kinase
ENST00000490149.6	this variant and one or more of the other non-overlapping variant fragments could be part of a single variant
ENST00000484353.1	serum/glucocorticoid regulated kinase
ENST00000484353.1	this variant fragment and one or more of the other non-overlapping variant fragments could be part of a single variant
ENST00000485771.1	serum/glucocorticoid regulated kinase
ENST00000460769.1	serum/glucocorticoid regulated kinase
ENST00000524929.1	serum/glucocorticoid regulated kinase
ENST00000533224.1	alternative 5' UTR
ENST00000670377.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660399.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000431422.2	Assembled from SLRseq reads (SRP049776)
ENST00000431422.2	novel transcript
ENST00000653261.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656789.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440090.5	novel transcript
ENST00000655975.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656596.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661139.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655247.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664108.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669308.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456749.1	novel transcript
ENST00000669104.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667755.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658387.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666623.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659389.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000657570.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417483.5	novel transcript
ENST00000664953.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653974.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660051.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667818.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655225.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000422736.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668601.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659858.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661465.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656511.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656511.1	novel transcript
ENST00000650393.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000665080.1	Assembled from SLRseq reads (SRP049776)
ENST00000665080.1	novel transcript
ENST00000655921.1	Assembled from SLRseq reads (SRP049776)
ENST00000607531.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668477.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668030.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665479.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423028.2	novel transcript
ENST00000666071.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668248.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000434593.1	novel transcript
ENST00000418837.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661776.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668549.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000412602.1	putative novel transcript
ENST00000452888.1	putative novel transcript
ENST00000447557.1	putative novel transcript
ENST00000265605.7	MANE_select
ENST00000265605.7	aldehyde dehydrogenase 8 family, member A1
ENST00000367845.6	aldehyde dehydrogenase 8 family, member A1
ENST00000460753.1	aldehyde dehydrogenase 8 family, member A1
ENST00000416448.2	putative novel transcript
ENST00000367837.10	HBS1-like (S. cerevisiae) (KIAA1038, EFRS)
ENST00000367837.10	MANE_select
ENST00000527005.5	HBS1-like (S. cerevisiae) (KIAA1038, EFRS)
ENST00000367826.6	NP_001138630.1
ENST00000529641.5	alternative 5' UTR
ENST00000527507.1	alternative 5' UTR
ENST00000314674.7	HBS1-like (S. cerevisiae) (KIAA1038, EFRS)
ENST00000367822.9	HBS1-like (S. cerevisiae) (KIAA1038, EFRS)
ENST00000447508.1	putative novel transcript
ENST00000341911.10	MANE_select
ENST00000341911.10	v-myb myeloblastosis viral oncogene homolog (avian)
ENST00000442647.7	CAGE supported TSS
ENST00000442647.7	LR annotation
ENST00000367814.8	v-myb myeloblastosis viral oncogene homolog (avian)
ENST00000420123.6	v-myb myeloblastosis viral oncogene homolog (avian)
ENST00000528140.5	alternative 3' UTR
ENST00000533384.5	alternative 3' UTR
ENST00000525514.5	alternative 3' UTR
ENST00000526320.5	alternative 3' UTR
ENST00000529586.5	alternative 3' UTR
ENST00000533808.5	alternative 3' UTR
ENST00000531845.5	v-myb myeloblastosis viral oncogene homolog (avian)
ENST00000430686.2	v-myb myeloblastosis viral oncogene homolog (avian)
ENST00000534736.1	alternative 3' UTR
ENST00000455534.1	Bender et al. 1987 [PMID: 3498214]
ENST00000434255.1	putative novel transcript
ENST00000527681.2	alternative 3' UTR
ENST00000679711.1	alternative 3' UTR
ENST00000680826.1	alternative 3' UTR
ENST00000681365.1	alternative 5' UTR
ENST00000681522.1	alternative 5' UTR
ENST00000681841.1	alternative 5' UTR
ENST00000681022.1	alternative 5' UTR
ENST00000265602.11	MANE_select
ENST00000265602.11	alternative 5' UTR
ENST00000679668.1	alternative 3' UTR
ENST00000679672.1	alternative 3' UTR
ENST00000680840.1	alternative 3' UTR
ENST00000681754.1	novel transcript
ENST00000679925.1	novel protein (contains FLJ20069 and DKFZp434N031)
ENST00000457866.6	alternative 5' UTR
ENST00000680119.1	alternative 3' UTR
ENST00000680337.1	alternative 3' UTR
ENST00000681340.1	alternative 5' UTR
ENST00000679434.1	alternative 3' UTR
ENST00000475846.6	novel protein
ENST00000487135.1	novel transcript
ENST00000681670.1	NMD likely if extended
ENST00000679476.1	alternative 3' UTR
ENST00000680656.1	alternative 3' UTR
ENST00000327035.10	novel protein
ENST00000488690.6	novel protein
ENST00000680968.1	alternative 3' UTR
ENST00000534469.1	alternative 5' UTR
ENST00000681596.1	alternative 5' UTR
ENST00000444302.1	novel transcript
ENST00000667807.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664629.1	Assembled from SLRseq reads (SRP049776)
ENST00000658067.1	Assembled from SLRseq reads (SRP049776)
ENST00000655302.1	Assembled from SLRseq reads (SRP049776)
ENST00000421378.3	Assembled from SLRseq reads (SRP049776)
ENST00000662332.1	Assembled from SLRseq reads (SRP049776)
ENST00000666467.1	Assembled from SLRseq reads (SRP049776)
ENST00000655480.1	Assembled from SLRseq reads (SRP049776)
ENST00000653664.1	Assembled from SLRseq reads (SRP049776)
ENST00000436554.5	continues from dJ71N10.2 in Em:AL133544
ENST00000436554.5	novel transcript
ENST00000579339.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664883.1	Assembled from SLRseq reads (SRP049776)
ENST00000423411.2	glyceraldehde-3-phosphate dehydrogenase (GAPD) pseudogene
ENST00000655506.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648709.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000416481.1	putative novel transcript
ENST00000447848.1	putative novel transcript
ENST00000308191.11	MANE_select
ENST00000308191.11	phosphodiesterase 7B
ENST00000446774.1	novel protein
ENST00000655005.1	Assembled from SLRseq reads (SRP049776)
ENST00000668291.1	Assembled from RACEseq reads
ENST00000655618.1	Assembled from SLRseq reads (SRP049776)
ENST00000451457.6	novel protein
ENST00000367784.6	novel protein
ENST00000420702.6	MANE_select
ENST00000420702.6	alternative 5' UTR
ENST00000420702.6	novel protein
ENST00000531224.6	KIAA0164 protein
ENST00000531224.6	MANE_select
ENST00000527613.5	alternative 3' UTR
ENST00000529826.5	NAGNAG splice site
ENST00000476194.1	novel transcript
ENST00000564248.1	confirm experimentally
ENST00000354570.7	microtubule-associated protein 7 (EMAP115, E-MAP-115)
ENST00000359015.5	MANE_select
ENST00000359015.5	mitogen-activated protein kinase kinase kinase 5 (ASK1, MEKK5, MAPKKK5)
ENST00000463140.1	novel transcript
ENST00000432477.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000432477.2	novel transcript
ENST00000661159.1	Assembled from SLRseq reads (SRP049776)
ENST00000367756.8	peroxisomal biogenesis factor 7 (PTS2R, RCDP1)
ENST00000318471.5	MANE_select
ENST00000318471.5	peroxisomal biogenesis factor 7 (PTS2R, RCDP1)
ENST00000331858.5	MANE_select
ENST00000418699.1	novel transcript
ENST00000432330.5	novel transcript
ENST00000458017.1	putative novel transcript
ENST00000316649.9	interleukin 20 receptor alpha (class II cytokine receptor ZCYTOR7)
ENST00000468393.5	interleukin 20 receptor alpha (class II cytokine receptor ZCYTOR7)
ENST00000367746.3	interleukin 20 receptor alpha (class II cytokine receptor ZCYTOR7)
ENST00000461799.1	interleukin 20 receptor alpha (class II cytokine receptor ZCYTOR7)
ENST00000460306.1	interleukin 20 receptor alpha (class II cytokine receptor ZCYTOR7)
ENST00000296980.7	MANE_select
ENST00000296980.7	class II cytokine receptor (IL22RA2) (interleukin 22-binding protein, IL22BP), variant 2 (CRF2-10L)
ENST00000349184.8	class II cytokine receptor (IL22RA2) (interleukin 22-binding protein, IL22BP), variant 1 (CRF2-10)
ENST00000339602.3	class II cytokine receptor (IL22RA2) (interleukin 22-binding protein, IL22BP), variant 3 (CRF2-10S)
ENST00000367739.9	MANE_select
ENST00000367739.9	interferon gamma receptor 1 (immune interferon, receptor for)
ENST00000647124.1	alternative 5' UTR
ENST00000645753.1	alternative 5' UTR
ENST00000646036.1	alternative 5' UTR
ENST00000646898.1	alternative 5' UTR
ENST00000646898.1	upstream uORF
ENST00000644894.1	upstream uORF
ENST00000458076.5	interferon gamma receptor 1 (immune interferon, receptor for)
ENST00000414770.5	interferon gamma receptor 1 (immune interferon, receptor for)
ENST00000478333.1	interferon gamma receptor 1 (immune interferon, receptor for)
ENST00000367734.4	MANE_select
ENST00000367734.4	novel protein (possible ortholog of murine oligodendrocyte transcription factor 3 (Olig3))
ENST00000656030.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656030.1	putative novel transcript
ENST00000440397.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666119.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669661.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671417.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000411615.5	putative novel transcript
ENST00000419220.1	putative novel transcript
ENST00000668179.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662141.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000421450.1	alternative 5' UTR
ENST00000421450.1	alternatively spliced 5' UTR; shares partial CDS with bA356I2.3.1
ENST00000421450.1	tumour necrosis factor, alpha-induced protein 3 (A20, TNFA1P2)
ENST00000612899.5	MANE_select
ENST00000612899.5	genebuild_only_MANE
ENST00000420009.5	alternative 5' UTR
ENST00000420009.5	alternatively spliced 5' UTR; shares partial CDS with bA356I2.3.1
ENST00000420009.5	tumour necrosis factor, alpha-induced protein 3 (A20, TNFA1P2)
ENST00000237289.8	tumour necrosis factor, alpha-induced protein 3 (A20, TNFA1P2)
ENST00000433680.1	4tumour necrosis factor, alpha-induced protein 3 (A20, TNFA1P2)
ENST00000433680.1	alternative 5' UTR
ENST00000433680.1	alternatively spliced 5' UTR; shares partial CDS with bA356I2.3.1
ENST00000485192.1	tumour necrosis factor, alpha-induced protein 3 (A20, TNFA1P2)
ENST00000667736.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000417932.1	putative novel transcript
ENST00000434437.5	putative novel transcript
ENST00000417800.1	putative novel transcript
ENST00000421351.4	MANE_select
ENST00000421351.4	p53-induced protein PIGPC1 (PERP)
ENST00000251691.5	MANE_select
ENST00000573100.2	MANE_select
ENST00000404229.1	pseudogene similar to Mus musculus upregulated during skeletal muscle growth 5 (Usmg5)
ENST00000607197.6	MANE_select
ENST00000453452.1	novel transcript
ENST00000427025.6	novel protein protein (KIAA1357)
ENST00000343505.9	NP_001137532.1
ENST00000405630.1	mitochondrial carrier homolog 1 (MTCH1) pseudogene
ENST00000432673.1	novel transcript
ENST00000428044.5	novel transcript
ENST00000458733.5	novel transcript
ENST00000664532.1	Assembled from SLRseq reads (SRP049776)
ENST00000447494.1	novel transcript
ENST00000624173.1	LOC100507462
ENST00000617445.5	CAGE supported TSS
ENST00000617445.5	MANE_select
ENST00000401414.4	alternative 5' UTR
ENST00000541398.7	MANE_select
ENST00000449542.1	novel 7 transmembrane receptor (rhodopsin family) pseudogene similar to CCRL1
ENST00000450536.7	MANE_select
ENST00000367663.8	NP_001122089.1
ENST00000529597.5	NAGNAG splice site
ENST00000409812.6	Human Swiss-Prot isoform SW:Q96D71-2.3
ENST00000258062.9	Human Swiss-Prot isoform SW:Q96D71-3.3
ENST00000258062.9	NAGNAG splice site
ENST00000258062.9	NP_114128.3
ENST00000367660.4	MANE_select
ENST00000367660.4	hypothetical protein PRO2013
ENST00000461027.1	hypothetical protein PRO2013
ENST00000367658.3	MANE_select
ENST00000367658.3	hHDC for homolog of Drosophila headcase (LOC51696)
ENST00000649069.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000585874.5	NMD likely if extended
ENST00000358430.8	MANE_select
ENST00000358430.8	novel protein DKFZp451A175 (similar to M. musculus muscle-derived protein MDP77)
ENST00000358430.8	novel protein DKFZp451A175 (similar to M. musculus muscle-derived protein MDP77), variant 1 (3' UTR includes FLJ32408)
ENST00000367652.4	novel protein
ENST00000441249.1	novel transcript
ENST00000440518.1	novel transcript
ENST00000367651.4	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 (MRG1, P35SRJ)
ENST00000367651.4	MANE_select
ENST00000666511.1	Assembled from SLRseq reads (SRP049776)
ENST00000668014.1	Assembled from SLRseq reads (SRP049776)
ENST00000655740.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658080.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654256.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000454788.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000454788.3	putative novel transcript
ENST00000665194.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664461.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000414038.5	novel transcript
ENST00000431609.1	novel transcript
ENST00000668346.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445585.1	putative novel transcript
ENST00000666152.1	Assembled from SLRseq reads (SRP049776)
ENST00000668850.1	Assembled from SLRseq reads (SRP049776)
ENST00000456896.6	novel transcript
ENST00000664620.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656952.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657358.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657580.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662808.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658153.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663116.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662987.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655146.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661724.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662820.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670422.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661527.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661527.1	novel transcript
ENST00000663225.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418834.1	novel transcript
ENST00000446458.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650553.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000455011.1	putative novel transcript
ENST00000667537.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000480652.1	neuromedin B receptor (NMBR)
ENST00000258042.1	neuromedin B receptor (NMBR)
ENST00000454401.1	putative novel transcript
ENST00000450456.2	not organism-supported
ENST00000367630.9	MANE_select
ENST00000491881.1	hypothetical protein HSPC228 (HSPC228)
ENST00000426166.1	putative novel transcript
ENST00000230173.10	novel protein (DKFZP564D0462)(FLJ14937)
ENST00000367608.6	novel protein (DKFZP564D0462)(FLJ14937)
ENST00000296932.13	LR annotation
ENST00000367609.8	CAGE supported TSS
ENST00000367609.8	LR annotation
ENST00000367609.8	MANE_select
ENST00000435011.6	NAGNAG splice site
ENST00000463637.1	novel protein (DKFZP564D0462)(FLJ14937)
ENST00000497898.2	novel protein (DKFZP564D0462)(FLJ14937)
ENST00000447311.1	novel transcript
ENST00000654741.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659367.1	Assembled from SLRseq reads (SRP049776)
ENST00000437067.1	putative novel transcript
ENST00000012134.7	alternative 5' UTR
ENST00000012134.7	human immunodeficiency virus type I enhancer binding protein 2 (human immunodeficiency virus type I enhancer-binding protein 2)(HIVEP2)(MBP-2, HIV-EP2)
ENST00000367603.8	MANE_select
ENST00000367603.8	human immunodeficiency virus type I enhancer binding protein 2 (human immunodeficiency virus type I enhancer-binding protein 2)(HIVEP2)(MBP-2, HIV-EP2)
ENST00000367604.6	alternative 5' UTR
ENST00000474532.1	human immunodeficiency virus type I enhancer binding protein 2 (human immunodeficiency virus type I enhancer-binding protein 2)(HIVEP2)(MBP-2, HIV-EP2)
ENST00000421237.1	putative novel transcript
ENST00000454411.1	putative novel transcript
ENST00000663724.1	Assembled from SLRseq reads (SRP049776)
ENST00000671458.1	Assembled from SLRseq reads (SRP049776)
ENST00000657536.1	Assembled from SLRseq reads (SRP049776)
ENST00000417650.1	putative novel transcript
ENST00000662381.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446115.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446115.2	novel transcript (FLJ32928)
ENST00000657620.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666199.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670340.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419957.6	novel transcript (FLJ32928)
ENST00000653679.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657496.1	Assembled from SLRseq reads (SRP049776)
ENST00000668463.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661404.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000454588.1	putative novel transcript
ENST00000357847.9	MANE_select
ENST00000423500.1	putative novel transcript
ENST00000606514.5	non canonical conserved
ENST00000237283.9	MANE_select
ENST00000237283.9	non canonical conserved
ENST00000367591.5	MANE_select
ENST00000367591.5	peroxisomal biogenesis factor 3 (peroxin 3)
ENST00000367592.5	peroxisomal biogenesis factor 3 (peroxin 3)
ENST00000002165.11	MANE_select
ENST00000002165.11	novel protein (MGC1314) similar to fucosidase, alpha-L- 1, tissue
ENST00000451668.1	novel protein (MGC1314) similar to fucosidase, alpha-L- 1, tissue
ENST00000367585.1	NMD likely if extended
ENST00000367585.1	novel protein (MGC1314) similar to fucosidase, alpha-L- 1, tissue
ENST00000367584.8	novel protein (contains KIAA0680)
ENST00000427704.6	novel protein (contains KIAA0680)
ENST00000305766.10	NP_001093636.1
ENST00000440869.6	NP_001093634.1
ENST00000440869.6	novel protein (contains KIAA0680)
ENST00000451827.6	novel protein (contains KIAA0680)
ENST00000661155.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657644.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000450575.1	novel transcript
ENST00000367576.6	MANE_select
ENST00000367576.6	novel protein (similar to nucleolin) (contains FLJ14909)
ENST00000237275.9	MANE_select
ENST00000237275.9	may simply continue as dJ468K18.5.2
ENST00000237275.9	novel protein similar to hypothetical mouse protein
ENST00000360537.6	pleiomorphic adenoma gene-like 1 (PLAG-like 1, LOT1, ZAC, ZAC tumor suppressor)
ENST00000649307.1	CAGE supported TSS
ENST00000649307.1	LR annotation
ENST00000649307.1	NM_001080953
ENST00000649307.1	alternative 5' UTR
ENST00000674357.1	CAGE supported TSS
ENST00000674357.1	MANE_select
ENST00000354765.6	pleiomorphic adenoma gene-like 1 (PLAG-like 1, LOT1, ZAC, ZAC tumor suppressor)
ENST00000367572.3	pleiomorphic adenoma gene-like 1 (PLAG-like 1, LOT1, ZAC, ZAC tumor suppressor)
ENST00000647880.1	alternative 5' UTR
ENST00000367571.3	pleiomorphic adenoma gene-like 1 (PLAG-like 1, LOT1, ZAC, ZAC tumor suppressor)
ENST00000417959.4	pleiomorphic adenoma gene-like 1 (PLAG-like 1, LOT1, ZAC, ZAC tumor suppressor)
ENST00000647988.1	alternative 5' UTR
ENST00000493898.1	pleiomorphic adenoma gene-like 1 (PLAG-like 1, LOT1, ZAC, ZAC tumor suppressor)
ENST00000635591.1	Arima T et al. (2000) PMID: 10936046
ENST00000635591.1	CAGE supported TSS
ENST00000635591.1	LR annotation
ENST00000635591.1	NR_002768.2
ENST00000367569.4	MANE_select
ENST00000367569.4	hypothetical protein MGC3133
ENST00000401492.1	pseudogene similar to hypothetical mouse protein
ENST00000367568.5	MANE_select
ENST00000367568.5	syntaxin 11
ENST00000433557.1	utrophin (dystrophin-related protein) (DRP, DRP1, DMDL)
ENST00000433557.1	utrophin (homologous to dystrophin) (DRP, DRP1, DMDL)
ENST00000367545.7	utrophin (dystrophin-related protein) (DRP, DRP1, DMDL)
ENST00000367545.7	utrophin (homologous to dystrophin)
ENST00000367545.7	utrophin (homologous to dystrophin) (DRP, DRP1, DMDL)
ENST00000421035.2	utrophin (homologous to dystrophin) (DRP, DRP1, DMDL)
ENST00000367526.8	utrophin (homologous to dystrophin) (DRP, DRP1, DMDL)
ENST00000367525.3	utrophin (homologous to dystrophin) (DRP, DRP1, DMDL)
ENST00000480333.1	utrophin (homologous to dystrophin)
ENST00000367524.7	utrophin (homologous to dystrophin)
ENST00000432686.5	utrophin (homologous to dystrophin)
ENST00000417142.5	utrophin (homologous to dystrophin)
ENST00000455022.1	utrophin (homologous to dystrophin)
ENST00000465299.1	non canonical conserved
ENST00000460618.1	utrophin (homologous to dystrophin)
ENST00000431309.1	putative novel transcript
ENST00000648178.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000450221.6	381827    381730
ENST00000450221.6	epilepsy, progressive myoclonus type 2, Lafora disease protein (laforin) protein
ENST00000639423.1	alternative 5' UTR
ENST00000367519.9	MANE_select
ENST00000367519.9	epilepsy, progressive myoclonus type 2, Lafora disease protein (laforin)
ENST00000435470.2	NP_001018051.1
ENST00000435470.2	confirm experimentally
ENST00000435470.2	epilepsy, progressive myoclonus type 2, Lafora disease protein (laforin)
ENST00000638262.1	confirm experimentally
ENST00000639465.1	alternative 5' UTR
ENST00000640225.1	alternative 3' UTR
ENST00000638783.1	alternative 5' UTR
ENST00000638778.1	alternative 5' UTR
ENST00000639849.1	epilepsy, progressive myoclonus type 2, Lafora disease protein (laforin)
ENST00000489412.1	epilepsy, progressive myoclonus type 2, Lafora disease protein (laforin)
ENST00000640297.1	NMD likely if extended
ENST00000461700.1	epilepsy, progressive myoclonus type 2, Lafora disease protein (laforin)
ENST00000404707.2	BTB/POZ domain zinc finger protein pseudogene
ENST00000655372.1	Assembled from SLRseq reads (SRP049776)
ENST00000655907.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000237281.5	MANE_select
ENST00000606388.6	Assembled from SLRseq reads (SRP049776)
ENST00000663890.1	Assembled from SLRseq reads (SRP049776)
ENST00000654828.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654828.1	Assembled from SLRseq reads (SRP049776)
ENST00000452617.6	Assembled from SLRseq reads (SRP049776)
ENST00000653352.1	Assembled from SLRseq reads (SRP049776)
ENST00000660586.1	Assembled from SLRseq reads (SRP049776)
ENST00000658327.1	Assembled from SLRseq reads (SRP049776)
ENST00000591489.6	Assembled from SLRseq reads (SRP049776)
ENST00000275233.12	MANE_select
ENST00000275233.12	alternative 5' UTR
ENST00000367505.6	novel protein similar to S. pombe Rad8
ENST00000282753.6	MANE_select
ENST00000367495.4	MANE_select
ENST00000367495.4	RAB32, member RAS oncogene family
ENST00000419168.2	novel transcript
ENST00000397944.8	MANE_select
ENST00000397944.8	NP_078970.3
ENST00000397944.8	confirm experimentally
ENST00000326929.8	FLJ40251
ENST00000662679.1	Assembled from SLRseq reads (SRP049776)
ENST00000654318.1	Assembled from SLRseq reads (SRP049776)
ENST00000660983.1	Assembled from SLRseq reads (SRP049776)
ENST00000669305.1	Assembled from SLRseq reads (SRP049776)
ENST00000669474.1	Assembled from SLRseq reads (SRP049776)
ENST00000666487.1	Assembled from SLRseq reads (SRP049776)
ENST00000661216.1	Assembled from SLRseq reads (SRP049776)
ENST00000655172.1	Assembled from SLRseq reads (SRP049776)
ENST00000656581.1	Assembled from SLRseq reads (SRP049776)
ENST00000667141.1	Assembled from SLRseq reads (SRP049776)
ENST00000660323.1	Assembled from SLRseq reads (SRP049776)
ENST00000657550.1	Assembled from SLRseq reads (SRP049776)
ENST00000654921.1	Assembled from SLRseq reads (SRP049776)
ENST00000657809.1	Assembled from SLRseq reads (SRP049776)
ENST00000670722.1	Assembled from SLRseq reads (SRP049776)
ENST00000657117.1	Assembled from SLRseq reads (SRP049776)
ENST00000655759.1	Assembled from SLRseq reads (SRP049776)
ENST00000662560.1	Assembled from SLRseq reads (SRP049776)
ENST00000660355.1	Assembled from SLRseq reads (SRP049776)
ENST00000671674.1	Assembled from SLRseq reads (SRP049776)
ENST00000665150.1	Assembled from SLRseq reads (SRP049776)
ENST00000661610.1	Assembled from SLRseq reads (SRP049776)
ENST00000659980.1	Assembled from SLRseq reads (SRP049776)
ENST00000367477.7	FLJ34275
ENST00000671556.1	Assembled from SLRseq reads (SRP049776)
ENST00000663777.1	Assembled from SLRseq reads (SRP049776)
ENST00000670235.1	Assembled from SLRseq reads (SRP049776)
ENST00000663694.1	Assembled from SLRseq reads (SRP049776)
ENST00000667163.1	Assembled from SLRseq reads (SRP049776)
ENST00000664872.1	Assembled from SLRseq reads (SRP049776)
ENST00000666827.1	Assembled from SLRseq reads (SRP049776)
ENST00000653851.1	Assembled from SLRseq reads (SRP049776)
ENST00000668874.1	Assembled from SLRseq reads (SRP049776)
ENST00000653106.1	Assembled from SLRseq reads (SRP049776)
ENST00000669549.1	Assembled from SLRseq reads (SRP049776)
ENST00000657865.1	Assembled from SLRseq reads (SRP049776)
ENST00000666983.1	Assembled from SLRseq reads (SRP049776)
ENST00000664859.1	Assembled from SLRseq reads (SRP049776)
ENST00000665382.1	Assembled from SLRseq reads (SRP049776)
ENST00000667404.1	Assembled from RACEseq reads
ENST00000657036.1	Assembled from RACEseq reads
ENST00000433308.2	Assembled from SLRseq reads (SRP049776)
ENST00000655055.1	Assembled from SLRseq reads (SRP049776)
ENST00000669025.1	Assembled from RACEseq reads
ENST00000447072.6	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000661207.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657330.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436295.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436295.2	putative novel transcript
ENST00000658795.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000359838.3	putative novel transcript
ENST00000367481.7	tomosyn (LOC134957), variant 1 (possible ortholog of rat m-tomosyn, contains FLJ30922)
ENST00000321680.10	tomosyn (LOC134957), variant 2 (possible ortholog of rat b-tomosyn)
ENST00000367480.7	tomosyn (LOC134957), variant 3 (possible ortholog of rat s-tomosyn)
ENST00000367475.6	tomosyn (LOC134957)
ENST00000392291.2	tomosyn (LOC134957)
ENST00000443556.1	may link to bA361F15.1
ENST00000443556.1	putative novel transcript
ENST00000367474.2	MANE_select
ENST00000367474.2	novel protein similar to hypothetical Drosophila proteins (contains a SAM domain)
ENST00000427015.1	novel transcript
ENST00000432506.5	novel transcript
ENST00000442094.5	novel transcript
ENST00000434985.1	novel transcript
ENST00000448909.1	putative novel transcript
ENST00000668177.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000422023.1	novel transcript
ENST00000417838.1	non canonical TEC
ENST00000417838.1	non canonical splice donor site
ENST00000652976.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423268.1	novel transcript
ENST00000367469.5	novel protein
ENST00000367467.8	MANE_select
ENST00000470750.1	novel transcript
ENST00000367463.5	MANE_select
ENST00000367463.5	uronyl-2-sulfotransferase (uronyl 2-sulfotransferase, dermatan/chondroitin sulfate 2-sulfotransferase)
ENST00000367463.5	uronyl-2-sulfotransferase (uronyl2-sulfotransferase, dermatan/chondroitin sulfate 2-sulfotransferase)
ENST00000473631.1	uronyl-2-sulfotransferase (uronyl 2-sulfotransferase, dermatan/chondroitin sulfate 2-sulfotransferase)
ENST00000466695.1	uronyl-2-sulfotransferase (uronyl 2-sulfotransferase, dermatan/chondroitin sulfate 2-sulfotransferase)
ENST00000413845.1	novel transcript
ENST00000433442.1	putative novel transcript
ENST00000451095.5	novel transcript
ENST00000443992.1	novel transcript
ENST00000445901.1	novel transcript
ENST00000606202.1	upstream ATG
ENST00000637181.2	MANE_select
ENST00000484505.1	mitogen-activated protein kinase kinase kinase 7 interacting protein 2 (TAK1-binding protein 2) (MAP3K7IP2)(TAB2, FLJ21885, KIAA0733)
ENST00000424421.2	EST:HY041238
ENST00000326669.6	MANE_select
ENST00000409806.8	MANE_select
ENST00000253329.3	MANE_select
ENST00000253329.3	peptidylprolyl isomerase (cyclophilin)-like 4 (HDCME13P)
ENST00000340881.2	peptidylprolyl isomerase (cyclophilin)-like 4 (HDCME13P)
ENST00000446392.1	putative novel transcript
ENST00000650599.1	non canonical conserved
ENST00000367419.10	MANE_select
ENST00000367419.10	novel protein (LOC116254)
ENST00000433539.1	novel protein
ENST00000419134.1	putative novel transcript
ENST00000648980.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000367411.7	MANE_select
ENST00000367411.7	genebuild_only_MANE
ENST00000543571.6	LATS, large tumor suppressor, homolog 1 (Drosophila)
ENST00000543571.6	MANE_select
ENST00000253339.9	alternative 5' UTR
ENST00000441107.5	alternative 5' UTR
ENST00000542720.1	LATS, large tumor suppressor, homolog 1 (Drosophila)
ENST00000340413.7	MANE_select
ENST00000463048.3	upstream uORF
ENST00000367378.6	alternative_3'_end
ENST00000464889.6	NM_005389.2
ENST00000480010.1	novel transcript
ENST00000647612.1	(ENA:SRP049776)
ENST00000647612.1	Assembled from SLRseq reads
ENST00000239367.7	MANE_select
ENST00000239367.7	novel protein (FLJ14735)
ENST00000463728.1	novel transcript
ENST00000367368.3	novel protein
ENST00000531073.1	alternative 5' UTR
ENST00000367360.7	MANE_select
ENST00000367360.7	novel protein similar to UL16 binding protein 2 (ULBP2)
ENST00000367351.4	MANE_select
ENST00000367351.4	UL16 binding protein 2 (RAET1H, ALCAN-alpha)
ENST00000229708.4	MANE_select
ENST00000229708.4	UL16 binding protein 1
ENST00000406262.1	pseudogene similar to UL16 binding protein 1 (ULBP16)
ENST00000367341.6	MANE_select
ENST00000367341.6	retinoic acid early transcript 1 (RAET1L)
ENST00000456346.1	putative novel transcript
ENST00000392260.2	prohibitin (PHB) pseudogene
ENST00000367339.7	MANE_select
ENST00000367339.7	UL16 binding protein 3
ENST00000361131.5	MANE_select
ENST00000361131.5	protein phosphatase 1, regulatory (inhibitor) subunit 14C (KEPI, NY-BR-81, CPI17-like)
ENST00000344419.8	MANE_select
ENST00000407887.1	alpha-methylacyl-CoA racemase (AMACR) pseudogene
ENST00000367326.1	novel protein (contains FLJ31738 and KIAA1209)
ENST00000644913.1	CAGE supported TSS
ENST00000358517.6	novel protein (contains FLJ31738 and KIAA1209)
ENST00000475490.1	novel protein (contains FLJ31738 and KIAA1209)
ENST00000430770.1	putative novel transcript
ENST00000456018.1	putative novel transcript
ENST00000455229.1	putative novel transcript
ENST00000398028.3	novel pseudogene similar to phosducin-like proteins
ENST00000367321.8	MANE_select
ENST00000367321.8	novel protein similar to C1-tetrahydrofolate synthases (contains DKFZP586G1517 protein and FLJ21145, contains a tetrahydrofolate dehydrogenase/cyclohydrolase domain)
ENST00000367308.8	novel protein similar to C1-tetrahydrofolate synthases
ENST00000441122.5	novel protein similar to C1-tetrahydrofolate synthases (contains DKFZP586G1517 protein and FLJ21145, contains a tetrahydrofolate dehydrogenase/cyclohydrolase domain)
ENST00000423867.2	novel protein similar to C1-tetrahydrofolate synthases (contains DKFZP586G1517 protein and FLJ21145, contains a tetrahydrofolate dehydrogenase/cyclohydrolase domain)
ENST00000421497.1	novel protein similar to C1-tetrahydrofolate synthases (contains DKFZP586G1517 protein and FLJ21145, contains a tetrahydrofolate dehydrogenase/cyclohydrolase domain)
ENST00000478643.1	novel protein similar to C1-tetrahydrofolate synthases (contains DKFZP586G1517 protein and FLJ21145, contains a tetrahydrofolate dehydrogenase/cyclohydrolase domain)
ENST00000420192.1	novel protein similar to C1-tetrahydrofolate synthases (contains DKFZP586G1517 protein and FLJ21145, contains a tetrahydrofolate dehydrogenase/cyclohydrolase domain)
ENST00000453602.1	novel protein similar to C1-tetrahydrofolate synthases
ENST00000450635.1	novel protein similar to C1-tetrahydrofolate synthases
ENST00000404372.1	ADP-riboslyation factor-like 4 (ARL4) pseudogene
ENST00000445833.1	novel transcript
ENST00000415477.1	novel transcript
ENST00000405720.1	60S ribosomal protein L32 (RPL32) pseudogene
ENST00000431947.1	putative novel transcript
ENST00000440335.1	ribosomal protein S12 (RPS12) pseudogene
ENST00000402676.7	MANE_select
ENST00000402676.7	genebuild_only_MANE
ENST00000253332.5	A kinase (PRKA) anchor protein (gravin) 12
ENST00000354675.10	A kinase (PRKA) anchor protein (gravin) 12
ENST00000490177.1	A kinase (PRKA) anchor protein (gravin) 12
ENST00000325144.5	MANE_select
ENST00000325144.5	novel protein (KIAA1483)
ENST00000444024.3	CAGE supported TSS
ENST00000444024.3	LR annotation
ENST00000444024.3	MANE_select
ENST00000367294.4	MANE_select
ENST00000367294.4	novel protein (FLJ12910), variant 1
ENST00000494826.1	novel protein, variant 2
ENST00000483931.1	novel transcript, variant 3
ENST00000239374.8	MANE_select
ENST00000239374.8	continued from bA108N8.3 in Em:AL590543
ENST00000239374.8	continues as bA282P11.1 in Em:AL359494
ENST00000239374.8	novel protein (FLJ23305)
ENST00000544131.1	overlapping uORF
ENST00000404742.5	alternative 5' UTR
ENST00000338799.9	alternative 5' UTR
ENST00000446550.1	alternative 5' UTR
ENST00000206249.8	MANE_select
ENST00000488573.1	estrogen receptor 1
ENST00000482101.1	estrogen receptor 1
ENST00000451697.1	putative novel transcript
ENST00000666889.1	Assembled from SLRseq reads (SRP049776)
ENST00000641922.1	CAGE supported TSS
ENST00000539504.5	Evidence: mouse SW:Q6ZWR6-3.2 (949aa)
ENST00000539504.5	synaptic nuclei expressed gene 1b (SYNE-1) (nesprin-1 beta, MYNE1, SYNE1, KIAA0796)
ENST00000367255.10	MANE_select
ENST00000347037.9	synaptic nuclei expressed gene 1b (SYNE-1) (nesprin-1 beta, MYNE1, SYNE1, KIAA0796)
ENST00000354674.4	Evidence: mouse SW:Q6ZWR6-2.2
ENST00000472563.2	synaptic nuclei expressed gene 1b (SYNE-1) (nesprin-1 beta, MYNE1, SYNE1, KIAA0796)
ENST00000488376.2	synaptic nuclei expressed gene 1b (SYNE-1) (nesprin-1 beta, MYNE1, SYNE1, KIAA0796)
ENST00000367253.8	confirm experimentally
ENST00000367248.7	Evidence: mouse SW:Q6ZWR6-5.2 (1431aa)
ENST00000413186.6	confirm experimentally
ENST00000535896.7	CAGE supported TSS
ENST00000412161.1	novel transcript
ENST00000458194.1	novel transcript
ENST00000532295.1	alternative 3' UTR
ENST00000367244.8	MANE_select
ENST00000367244.8	vasoactive intestinal peptide
ENST00000367243.7	vasoactive intestinal peptide
ENST00000431366.1	vasoactive intestinal peptide
ENST00000666093.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666093.1	Assembled from SLRseq reads (SRP049776)
ENST00000656248.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670640.1	Assembled from SLRseq reads (SRP049776)
ENST00000657202.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659837.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654424.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456715.5	novel transcript
ENST00000417654.1	putative novel transcript
ENST00000670414.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663653.1	Assembled from SLRseq reads (SRP049776)
ENST00000671138.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658966.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667732.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652681.1	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000477822.2	F-box only protein 5 (EMI1, FBX5, F-box protein Fbx5)
ENST00000229758.8	MANE_select
ENST00000671635.1	Assembled from SLRseq reads (SRP049776)
ENST00000654706.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000442269.1	putative novel transcript
ENST00000461949.5	novel transcript
ENST00000414771.5	novel protein
ENST00000464135.5	novel transcript
ENST00000367231.9	novel protein
ENST00000367230.5	novel protein
ENST00000485512.5	novel transcript
ENST00000367233.10	MANE_select
ENST00000367233.10	similar to prokaryotic-type class I peptide chain release factors (LOC54516)
ENST00000485283.5	novel transcript
ENST00000463251.1	novel transcript
ENST00000448966.1	novel protein
ENST00000482526.1	novel transcript
ENST00000206262.2	MANE_select
ENST00000206262.2	genebuild_only_MANE
ENST00000436953.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436953.2	novel transcript
ENST00000330432.12	MANE_select
ENST00000524150.2	not organism-supported
ENST00000419506.6	NP_001138758.1
ENST00000522555.5	alternative 5' UTR
ENST00000522236.1	alternative 5' UTR
ENST00000422970.6	alternative 5' UTR
ENST00000517438.5	alternative 5' UTR
ENST00000519405.5	alternative 5' UTR
ENST00000519190.1	alternative 5' UTR
ENST00000520261.1	alternative 5' UTR
ENST00000456309.1	ribosomal protein L17 (RPL17) pseudogene
ENST00000607772.6	MANE_select
ENST00000424998.3	similar to maguin-2; maguin-1 (LOC154043, FLJ31349)
ENST00000454664.2	similar to maguin-2; maguin-1 (LOC154043, FLJ31349)
ENST00000657099.1	Assembled from SLRseq reads (SRP049776)
ENST00000658375.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000461219.5	novel protein (KIAA1116)
ENST00000367178.8	MANE_select
ENST00000367178.8	novel protein (KIAA1116)
ENST00000464628.1	novel protein (KIAA1116)
ENST00000479234.1	novel protein (KIAA1116)
ENST00000545347.5	alternative 5' UTR
ENST00000538270.5	alternative 5' UTR
ENST00000535231.5	alternative 5' UTR
ENST00000528535.5	alternative 5' UTR
ENST00000535583.1	alternative 5' UTR
ENST00000360366.8	Human Swiss-Prot isoform: Q8IVF5-5.4 (1077aa); partial at its 5' end
ENST00000529824.6	Human Swiss-Prot isoform: Q8IVF5-2.4 (1730aa)
ENST00000529824.6	confirm experimentally
ENST00000456877.6	Human Swiss-Prot isoform: Q8IVF5-4.4 (1013aa)
ENST00000528391.6	T-cell lymphoma invasion and metastasis 2 (SIF and Tiam 1-like exchange factor) (TIAM2)(STEF)
ENST00000275246.11	Human Swiss-Prot isoform: Q8IVF5-3.4 (626aa)
ENST00000435295.1	putative novel transcript
ENST00000367166.5	MANE_select
ENST00000367166.5	transcription factor B1, mitochondrial (CGI-75 protein homolog of yeast mitochondrial transcription factor B) (TFB1M)(CGI75, mtTFB, CGI-75)
ENST00000468889.5	transcription factor B1, mitochondrial (CGI-75 protein homolog of yeast mitochondrial transcription factor B) (TFB1M)(CGI75, mtTFB, CGI-75)
ENST00000470239.1	transcription factor B1, mitochondrial (CGI-75 protein homolog of yeast mitochondrial transcription factor B) (TFB1M)(CGI75, mtTFB, CGI-75)
ENST00000495806.1	transcription factor B1, mitochondrial (CGI-75 protein homolog of yeast mitochondrial transcription factor B) (TFB1M)(CGI75, mtTFB, CGI-75)
ENST00000489874.5	transcription factor B1, mitochondrial (CGI-75 protein homolog of yeast mitochondrial transcription factor B) (TFB1M)(CGI75, mtTFB, CGI-75)
ENST00000487586.5	transcription factor B1, mitochondrial (CGI-75 protein homolog of yeast mitochondrial transcription factor B) (TFB1M)(CGI75, mtTFB, CGI-75)
ENST00000475849.1	transcription factor B1, mitochondrial (CGI-75 protein homolog of yeast mitochondrial transcription factor B) (TFB1M)(CGI75, mtTFB, CGI-75)
ENST00000480390.1	transcription factor B1, mitochondrial (CGI-75 protein homolog of yeast mitochondrial transcription factor B) (TFB1M)(CGI75, mtTFB, CGI-75)
ENST00000466349.1	transcription factor B1, mitochondrial (CGI-75 protein homolog of yeast mitochondrial transcription factor B) (TFB1M)(CGI75, mtTFB, CGI-75)
ENST00000367165.3	MANE_select
ENST00000367165.3	claudin 20 (CLDN20)
ENST00000453579.1	putative novel transcript
ENST00000159060.3	MANE_select
ENST00000159060.3	NADPH oxidase 3 (NADPH oxidase catalytic subunit-like 3) (NOX3)(GP91-3)
ENST00000663591.1	Assembled from SLRseq reads (SRP049776)
ENST00000648863.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000449072.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449072.2	novel transcript
ENST00000433486.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000433486.2	novel transcript
ENST00000346085.10	CAGE supported TSS
ENST00000346085.10	confirm experimentally
ENST00000636930.2	MANE_select
ENST00000636930.2	confirm experimentally
ENST00000350026.10	confirm experimentally
ENST00000635849.1	CAGE supported TSS
ENST00000637003.1	CAGE supported TSS
ENST00000637904.1	CAGE supported TSS
ENST00000637810.1	confirm experimentally
ENST00000635957.1	NAGNAG splice site
ENST00000442936.1	putative novel transcript
ENST00000400788.9	MANE_select
ENST00000367144.4	chromosome 6 open reading frame 35 (BM033)
ENST00000405916.2	lactate dehydrogenase A (LDHA) pseudogene
ENST00000407196.1	hypothetical protein PNAS-131 pseudogene
ENST00000359775.10	MANE_select
ENST00000401486.1	novel reverse transcriptase (RNA-dependent DNA polymerase) domain containing pseudogene
ENST00000614800.4	alternative 5' UTR
ENST00000679814.1	alternative 3' UTR
ENST00000392185.8	MANE_select
ENST00000411838.1	putative novel transcript
ENST00000422776.5	putative novel transcript
ENST00000457427.1	putative novel transcript
ENST00000446768.1	novel transcript
ENST00000405341.1	HSPE1 (heat shock 10kD protein 1 (chaperonin 10)) pseudogene
ENST00000355585.9	MANE_select
ENST00000638626.1	CAGE supported TSS
ENST00000485863.1	synaptojanin 2 (inositol phosphate 5'-phosphatase 2, INPP5H) (contains FLJ23714)
ENST00000649179.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000442328.1	novel transcript
ENST00000647468.2	CAGE supported TSS
ENST00000647468.2	LR annotation
ENST00000647468.2	MANE_select
ENST00000646190.1	NMD likely if extended
ENST00000646410.1	NAGNAG splice site
ENST00000648328.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000607778.2	MANE_select
ENST00000432358.1	novel transcript
ENST00000367097.8	MANE_select
ENST00000367097.8	tubby super-family protein (TUSP, KIAA1397)
ENST00000367094.6	tubby super-family protein (TUSP, KIAA1397)
ENST00000344851.4	signal recognition particle 72kD (SRP72) pseudogene
ENST00000665073.1	Assembled from SLRseq reads (SRP049776)
ENST00000435116.1	novel transcript
ENST00000406011.1	pseudogene similar to Siah-interacting protein (SIP, calcyclin binding protein, CACYBP)
ENST00000367090.4	KIAA1423 protein
ENST00000367090.4	non canonical U12
ENST00000367090.4	upstream ATG
ENST00000403590.1	pseudogene similar to putative deoxyribonuclease KIAA0218
ENST00000367088.1	t-complex-associated-testis-expressed 1-like 1 (CW-1, tctex-1)
ENST00000367089.8	MANE_select
ENST00000367089.8	t-complex-associated-testis-expressed 1-like 1 (CW-1, tctex-1)
ENST00000367085.3	t-complex-associated-testis-expressed 1-like 1 (CW-1, tctex-1)
ENST00000360448.8	synaptotagmin-like 3 (SLP3, FLJ31188)
ENST00000367081.7	align_id:3731354|asmbl_221519
ENST00000469735.1	alternative 5' UTR
ENST00000469735.1	alternatively spliced in 5' UTR; exact exon structure linking this object to the rest of the gene is not yet determined
ENST00000469735.1	synaptotagmin-like 3 (SLP3, FLJ31188)
ENST00000611299.5	MANE_select
ENST00000406819.2	novel pseudogene
ENST00000337147.11	CAGE supported TSS
ENST00000337147.11	alternative 5' UTR
ENST00000337147.11	villin 2 (ezrin, Villin-2, cytovillin, CVL, MGC1584, DKFZp762H157)
ENST00000367075.4	MANE_select
ENST00000367075.4	villin 2 (ezrin, Villin-2, cytovillin, CVL, MGC1584, DKFZp762H157), variant 3; alternatively spliced in 5' UTR
ENST00000476189.1	villin 2 (ezrin, Villin-2, cytovillin, CVL, MGC1584, DKFZp762H157)
ENST00000451712.2	putative novel transcript
ENST00000642329.1	CAGE supported TSS
ENST00000654049.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654049.1	novel transcript
ENST00000486232.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000486232.2	NP_001181961.1
ENST00000666927.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653976.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659187.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663769.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663950.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655791.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663340.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658761.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000367072.5	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000367073.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000367073.6	novel protein
ENST00000650421.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000643288.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000434104.1	SNARE Vti1a-beta protein pseudogene (LOC143187)
ENST00000367069.7	MANE_select
ENST00000367069.7	radial spoke protein 3 (RSP3)
ENST00000449822.5	radial spoke protein 3 (RSP3)
ENST00000659171.1	Assembled from SLRseq reads (SRP049776)
ENST00000659621.1	Assembled from SLRseq reads (SRP049776)
ENST00000607796.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667828.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667828.1	Assembled from SLRseq reads (SRP049776)
ENST00000664321.1	Assembled from SLRseq reads (SRP049776)
ENST00000669184.1	Assembled from SLRseq reads (SRP049776)
ENST00000670185.1	Assembled from SLRseq reads (SRP049776)
ENST00000659798.1	Assembled from SLRseq reads (SRP049776)
ENST00000668318.1	Assembled from SLRseq reads (SRP049776)
ENST00000665423.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667452.1	Assembled from SLRseq reads (SRP049776)
ENST00000654871.1	Assembled from SLRseq reads (SRP049776)
ENST00000656128.1	Assembled from SLRseq reads (SRP049776)
ENST00000655636.1	Assembled from SLRseq reads (SRP049776)
ENST00000663014.1	Assembled from SLRseq reads (SRP049776)
ENST00000657923.1	Assembled from SLRseq reads (SRP049776)
ENST00000643132.2	Assembled from SLRseq reads (SRP049776)
ENST00000367066.8	MANE_select
ENST00000367066.8	T-cell activation GTPase activating protein
ENST00000642909.1	T-cell activation GTPase activating protein
ENST00000338313.5	T-cell activation GTPase activating protein
ENST00000642829.1	CAGE supported TSS
ENST00000446887.1	putative novel transcript
ENST00000665691.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000421161.1	novel transcript
ENST00000653957.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419064.3	putative novel transcript
ENST00000297267.14	MANE_select
ENST00000297267.14	NP_115921.2
ENST00000427460.2	ID: align_id:1365980|asmbl_85883
ENST00000427460.2	pacbio_capture_seq_hsTestes : m150424_073901_42137_c100813372550000001823175210081562_s1_p0_19047_ccs ;Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000655326.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000666569.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000429657.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000429657.2	novel transcript
ENST00000666781.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649001.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000654710.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655999.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656716.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000654094.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656085.1	Assembled from SLRseq reads (SRP049776)
ENST00000430078.1	FLJ27255
ENST00000538183.7	MANE_select
ENST00000367055.8	alternative 3' UTR
ENST00000367055.8	superoxide dismutase 2, mitochondrial
ENST00000367054.6	alternative 3' UTR
ENST00000546087.5	upstream ATG
ENST00000546087.5	upstream uORF
ENST00000337404.8	NP_001019637.1
ENST00000537657.5	alternative 5' UTR
ENST00000452684.2	superoxide dismutase 2, mitochondrial
ENST00000403291.1	pseudogene similar to heterogenous nuclear ribonucleoprotein H
ENST00000358372.8	Wilms' tumor 1-associating protein (KIAA0105) (WTAP)
ENST00000650096.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000621533.5	MANE_select
ENST00000621533.5	genebuild_only_MANE
ENST00000494513.1	Wilms' tumor 1-associating protein (KIAA0105) (WTAP)
ENST00000337387.4	Wilms' tumor 1-associating protein (KIAA0105) (WTAP)
ENST00000462110.1	Wilms' tumor 1-associating protein (KIAA0105) (WTAP)
ENST00000367048.5	MANE_select
ENST00000367048.5	acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase)
ENST00000467951.1	acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase)
ENST00000472052.1	acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase)
ENST00000321394.12	MANE_select
ENST00000321394.12	t-complex 1 (CCT1, Ccta, D6S230E)
ENST00000392168.6	NP_001008897.1
ENST00000467544.2	t-complex 1 (CCT1, Ccta, D6S230E)
ENST00000539948.5	alternative 5' UTR
ENST00000536394.1	alternative 5' UTR
ENST00000476826.5	mitochondrial ribosomal protein L18
ENST00000479638.5	mitochondrial ribosomal protein L18
ENST00000367034.5	MANE_select
ENST00000367034.5	mitochondrial ribosomal protein L18
ENST00000480842.1	mitochondrial ribosomal protein L18
ENST00000392167.4	MANE_select
ENST00000392167.4	NP_775787.1
ENST00000434562.2	putative novel transcript
ENST00000674077.2	MANE_select
ENST00000356956.6	MANE_select
ENST00000475584.1	insulin-like growth factor 2 receptor (cation-independent mannose-6 phosphate receptor, Insulin-like growth factor-2 receptor (mannose-6-phosphate receptor, cation-independent)) (IGF2R)(MPRI, CD222, CIMPR, M6P-R)
ENST00000678224.1	CAGE supported TSS
ENST00000366273.3	calcium binding protein P22 (calcineurin B homolog, SLC9A1 binding protein, calcineurin homologous protein) (CHP) (SLC9A1BP) pseudogene
ENST00000366963.9	LR annotation
ENST00000366963.9	MANE_select
ENST00000366963.9	solute carrier family 22 (organic cation  transporter), member 1 (SLC22A1) (OCT1)
ENST00000324965.8	confirm experimentally
ENST00000457470.6	confirm experimentally
ENST00000460902.2	confirm experimentally
ENST00000460902.2	solute carrier family 22 (organic cation  transporter), member 1 (SLC22A1) (OCT1)
ENST00000478607.1	solute carrier family 22 (organic cation  transporter), member 1 (SLC22A1) (OCT1)
ENST00000402250.1	novel pseudogene
ENST00000486916.5	solute carrier family 22 (organic cation transporter), member 2 (SLC22A2) (OCT2)
ENST00000366953.8	MANE_select
ENST00000366953.8	solute carrier family 22 (organic cation transporter), member 2 (SLC22A2) (OCT2)
ENST00000498556.1	solute carrier family 22 (organic cation transporter), member 2 (SLC22A2) (OCT2)
ENST00000491092.1	solute carrier family 22 (organic cation transporter), member 2 (SLC22A2) (OCT2)
ENST00000366952.1	solute carrier family 22 (organic cation transporter), member 2 (SLC22A2) (OCT2)
ENST00000489644.1	solute carrier family 22 (organic cation transporter), member 2 (SLC22A2) (OCT2)
ENST00000419196.1	putative novel transcript
ENST00000275300.3	MANE_select
ENST00000275300.3	solute carrier family 22 (extraneuronal monoamine transporter), member 3 (extraneuronal monoamine transporter solute carrier family 22 (organic cation transporter), member 3) (SLC22A3)(EMT, EMTh, OCT3)
ENST00000663900.1	Assembled from SLRseq reads (SRP049776)
ENST00000454031.6	plasminogen (PLG) pseudogene
ENST00000435757.6	non canonical TEC
ENST00000316300.10	MANE_select
ENST00000316300.10	The CDS of this object differs considerably from that of Em:X06290.1, the mRNA on which it was based (McLean et al (1987) Nature 330 (6144) 132-137)
ENST00000316300.10	lipoprotein, Lp(a) (LP, AK38)
ENST00000452651.1	pseudogene similar to part of plasminogen (PLG)
ENST00000448126.5	putative novel transcript
ENST00000447702.1	putative novel transcript
ENST00000308192.14	MANE_select
ENST00000462918.5	plasminogen (PLG)
ENST00000659713.1	Assembled from SLRseq reads (SRP049776)
ENST00000437861.1	novel transcript
ENST00000650447.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000454826.5	novel transcript
ENST00000443380.5	novel transcript
ENST00000413062.1	novel transcript
ENST00000405580.1	pseudogene similar to lipoproteins (contains kringle domains)
ENST00000653049.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663228.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420601.1	novel transcript
ENST00000417479.2	Assembled from SLRseq reads (SRP049776)
ENST00000417479.2	novel transcript
ENST00000664826.1	Assembled from SLRseq reads (SRP049776)
ENST00000366919.6	mitogen-activated protein kinase kinase kinase 4 (MTK1, MEKK4, MAPKKK4, KIAA0213, homolog of yeast SSK2/SSK22 MAP kinase kinase kinase), variant 2 (variant b)
ENST00000392142.9	MANE_select
ENST00000392142.9	mitogen-activated protein kinase kinase kinase 4 (MTK1, MEKK4, MAPKKK4, KIAA0213, homolog of yeast SSK2/SSK22 MAP kinase kinase kinase), variant 1 (variant a)
ENST00000446500.1	mitogen-activated protein kinase kinase kinase 4 (MTK1, MEKK4, MAPKKK4, KIAA0213, homolog of yeast SSK2/SSK22 MAP kinase kinase kinase)
ENST00000320285.9	FLJ23628, DKFZp434M038
ENST00000320285.9	MANE_select
ENST00000437165.1	lysophosphatidic acid acyltransferase-delta (LPAAT-delta), variant 4 (contains mRNA DKFZp434M038)
ENST00000436279.1	lysophosphatidic acid acyltransferase-delta (LPAAT-delta)
ENST00000366905.3	lysophosphatidic acid acyltransferase-delta (LPAAT-delta)
ENST00000366898.6	MANE_select
ENST00000366898.6	Parkinson disease (autosomal recessive, juvenile) 2, parkin (PDJ, PRKN, AR-JP), variant 1 (variant 1)
ENST00000674006.1	CAGE supported TSS
ENST00000674436.1	Assembled from SLRseq reads (SRP049776)
ENST00000366897.5	Parkinson disease (autosomal recessive, juvenile) 2, parkin (PDJ, PRKN, AR-JP), variant 2 (variant 2)
ENST00000366896.5	Parkinson disease (autosomal recessive, juvenile) 2, parkin (PDJ, PRKN, AR-JP)
ENST00000366896.5	Parkinson disease (autosomal recessive, juvenile) 2, parkin (PDJ, PRKN, AR-JP), variant 3 (variant 3)
ENST00000366894.6	Parkinson disease (autosomal recessive, juvenile) 2, parkin (PDJ, PRKN, AR-JP)
ENST00000338468.8	Parkinson disease (autosomal recessive, juvenile) 2, parkin (PDJ, PRKN, AR-JP)
ENST00000338468.8	alternative 5' UTR
ENST00000479615.5	Parkinson disease (autosomal recessive, juvenile) 2, parkin (PDJ, PRKN, AR-JP)
ENST00000674501.1	Assembled from SLRseq reads (SRP049776)
ENST00000366892.5	Parkinson disease (autosomal recessive, juvenile) 2, parkin (PDJ, PRKN, AR-JP)
ENST00000674232.1	Assembled from RACEseq reads
ENST00000674259.1	Assembled from RACEseq reads
ENST00000674493.1	Assembled from RACEseq reads
ENST00000674395.1	Assembled from RACEseq reads
ENST00000674176.1	Assembled from RACEseq reads
ENST00000647006.2	Assembled from RACEseq reads
ENST00000674250.1	Assembled from RACEseq reads
ENST00000674224.1	Assembled from RACEseq reads
ENST00000674353.1	Assembled from RACEseq reads
ENST00000660049.1	Assembled from SLRseq reads (SRP049776)
ENST00000662479.1	Assembled from SLRseq reads (SRP049776)
ENST00000441609.1	keratin 8 (KRT8) pseudogene
ENST00000366889.6	novel protein (FLJ32724)
ENST00000366888.6	alternative 5' UTR
ENST00000366888.6	novel protein (FLJ32724)
ENST00000404178.1	ribosomal protein L34 (RPL34) pseudogene
ENST00000647963.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000440924.5	novel transcript
ENST00000433489.5	novel transcript
ENST00000418665.1	novel transcript
ENST00000653179.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648584.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000666094.1	Assembled from SLRseq reads (SRP049776)
ENST00000654125.1	Assembled from SLRseq reads (SRP049776)
ENST00000660067.1	Assembled from SLRseq reads (SRP049776)
ENST00000668978.1	Assembled from SLRseq reads (SRP049776)
ENST00000622490.5	Assembled from SLRseq reads (SRP049776)
ENST00000663473.1	Assembled from SLRseq reads (SRP049776)
ENST00000664395.1	Assembled from SLRseq reads (SRP049776)
ENST00000661121.1	Assembled from SLRseq reads (SRP049776)
ENST00000653112.1	Assembled from SLRseq reads (SRP049776)
ENST00000653943.1	Assembled from SLRseq reads (SRP049776)
ENST00000670264.1	Assembled from SLRseq reads (SRP049776)
ENST00000658885.1	Assembled from SLRseq reads (SRP049776)
ENST00000671031.1	Assembled from SLRseq reads (SRP049776)
ENST00000666799.1	Assembled from SLRseq reads (SRP049776)
ENST00000660683.1	Assembled from SLRseq reads (SRP049776)
ENST00000656774.1	Assembled from SLRseq reads (SRP049776)
ENST00000663456.1	Assembled from SLRseq reads (SRP049776)
ENST00000654692.1	Assembled from SLRseq reads (SRP049776)
ENST00000660774.1	Assembled from SLRseq reads (SRP049776)
ENST00000659382.1	Assembled from SLRseq reads (SRP049776)
ENST00000655388.1	Assembled from SLRseq reads (SRP049776)
ENST00000658293.1	Assembled from SLRseq reads (SRP049776)
ENST00000665860.1	Assembled from SLRseq reads (SRP049776)
ENST00000663455.1	Assembled from SLRseq reads (SRP049776)
ENST00000626335.2	Assembled from SLRseq reads (SRP049776)
ENST00000670113.1	Assembled from SLRseq reads (SRP049776)
ENST00000655608.1	Assembled from SLRseq reads (SRP049776)
ENST00000667079.1	Assembled from SLRseq reads (SRP049776)
ENST00000655491.1	Assembled from SLRseq reads (SRP049776)
ENST00000653903.1	Assembled from SLRseq reads (SRP049776)
ENST00000659196.1	Assembled from SLRseq reads (SRP049776)
ENST00000648606.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000669981.1	Assembled from SLRseq reads (SRP049776)
ENST00000650230.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000406553.1	RPL37A (60S Ribosomal Protein L37A) pseudogene
ENST00000453779.6	homolog of mouse quaking QKI (KH domain RNA binding protein)
ENST00000275262.11	homolog of mouse quaking QKI (KH domain RNA binding protein)
ENST00000361752.8	MANE_select
ENST00000361752.8	homolog of mouse quaking QKI (KH domain RNA binding protein)
ENST00000424802.7	confirm experimentally
ENST00000537041.5	alternative 5' UTR
ENST00000537124.5	alternative 5' UTR
ENST00000544823.5	alternative 5' UTR
ENST00000665613.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671100.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657614.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665405.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669147.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657157.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667749.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664207.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659903.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666400.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452944.1	putative novel transcript
ENST00000669856.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657138.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648257.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000659063.1	Assembled from SLRseq reads (SRP049776)
ENST00000670784.1	Assembled from SLRseq reads (SRP049776)
ENST00000451328.1	novel transcript
ENST00000655888.1	Assembled from SLRseq reads (SRP049776)
ENST00000654484.1	Assembled from SLRseq reads (SRP049776)
ENST00000434356.1	novel transcript
ENST00000656215.1	Assembled from SLRseq reads (SRP049776)
ENST00000656968.1	Assembled from SLRseq reads (SRP049776)
ENST00000664420.1	Assembled from SLRseq reads (SRP049776)
ENST00000663349.1	Assembled from SLRseq reads (SRP049776)
ENST00000662461.1	Assembled from SLRseq reads (SRP049776)
ENST00000663119.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663119.1	Assembled from SLRseq reads (SRP049776)
ENST00000663119.1	putative novel transcript
ENST00000656918.1	Assembled from SLRseq reads (SRP049776)
ENST00000456118.2	Assembled from SLRseq reads (SRP049776)
ENST00000667740.1	Assembled from SLRseq reads (SRP049776)
ENST00000407696.2	pseudogene similar to zinc finger proteins
ENST00000230301.9	MANE_select
ENST00000230301.9	novel protein
ENST00000491176.1	novel transcript
ENST00000648917.1	CAGE supported TSS
ENST00000539869.4	CAGE supported TSS
ENST00000539869.4	MANE_select
ENST00000444465.1	novel transcript
ENST00000435810.1	putative novel transcript
ENST00000670033.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000431017.1	putative novel transcript
ENST00000402643.2	glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene
ENST00000663046.1	Assembled from SLRseq reads (SRP049776)
ENST00000456477.1	novel transcript
ENST00000366876.7	MANE_select
ENST00000366871.7	T, brachyury homolog (mouse)
ENST00000255500.2	guanine nucleotide binding protein (G protein), gamma 5 pseudogene (GCG5)
ENST00000322583.5	MANE_select
ENST00000529616.1	alternative 5' UTR
ENST00000658227.1	Assembled from SLRseq reads (SRP049776)
ENST00000361731.4	MANE_select
ENST00000487841.5	novel transcript
ENST00000479490.1	novel transcript
ENST00000478705.5	novel transcript
ENST00000488773.1	novel transcript
ENST00000494682.1	novel transcript
ENST00000421336.1	pseudogene similar to heterogeneous nuclear ribonuclearprotein A
ENST00000666448.1	Assembled from SLRseq reads (SRP049776)
ENST00000659081.1	Assembled from SLRseq reads (SRP049776)
ENST00000360961.11	MANE_select
ENST00000360961.11	brain protein 44-like (BRP44l)
ENST00000487218.5	novel transcript
ENST00000366868.5	brain protein 44-like (BRP44l)
ENST00000475708.1	novel transcript
ENST00000265678.9	MANE_select
ENST00000503859.5	NP_001006933.1
ENST00000405189.7	alternative 5' UTR
ENST00000507350.5	alternative 5' UTR
ENST00000512860.5	alternative 5' UTR
ENST00000506565.1	alternative 5' UTR
ENST00000511034.1	alternative 5' UTR
ENST00000667538.1	Assembled from SLRseq reads (SRP049776)
ENST00000454907.1	IGF-II mRNA-binding protein 3 (KOC1) pseudogene
ENST00000455390.1	putative novel transcript
ENST00000508775.6	MANE_select
ENST00000508775.6	ribonuclease 6 precursor (RNASE6PL)(FLJ10907)
ENST00000366855.10	ribonuclease 6 precursor (RNASE6PL)(FLJ10907)
ENST00000421787.5	ribonuclease 6 precursor (RNASE6PL)(FLJ10907)
ENST00000476238.6	alternative 5' UTR
ENST00000476238.6	ribonuclease 6 precursor (RNASE6PL)(FLJ10907)
ENST00000478180.6	alternative 5' UTR
ENST00000478180.6	ribonuclease 6 precursor (RNASE6PL)(FLJ10907)
ENST00000467705.6	ribonuclease 6 precursor (RNASE6PL)(FLJ10907)
ENST00000358165.7	ribonuclease 6 precursor (RNASE6PL)(FLJ10907)
ENST00000496851.6	ribonuclease 6 precursor (RNASE6PL)(FLJ10907)
ENST00000444102.1	novel transcript
ENST00000649589.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000366847.9	FGFR1 oncogene partner (FOP)
ENST00000366847.9	MANE_select
ENST00000349556.4	FGFR1 oncogene partner (FOP)
ENST00000494781.5	FGFR1 oncogene partner (FOP)
ENST00000476078.1	FGFR1 oncogene partner (FOP)
ENST00000496181.1	FGFR1 oncogene partner (FOP)
ENST00000488525.1	FGFR1 oncogene partner (FOP)
ENST00000341935.9	alternative 5' UTR
ENST00000341935.9	alternatively spliced 5' UTR; shares CDS with bA517H2.1.1
ENST00000341935.9	chemokine (C-C motif) receptor 6 (chemokine receptor-like3 chemokine (C-C) receptor 6 G protein-coupled receptor 29 seven-transmembrane receptor, lymphocyte, 22) (CCR6) (BN-1, CKR6, DCR2, CKRL3, DRY-6, GPR29, CKR-L3, CMKBR6, GPRCY4, STRL22, GPR-CY4)
ENST00000349984.6	alternative 5' UTR
ENST00000349984.6	alternatively spliced 5' UTR; shares CDS with bA517H2.1.2
ENST00000349984.6	chemokine (C-C motif) receptor 6 (chemokine receptor-like3 chemokine (C-C) receptor 6 G protein-coupled receptor 29 seven-transmembrane receptor, lymphocyte, 22) (CCR6) (BN-1, CKR6, DCR2, CKRL3, DRY-6, GPR29, CKR-L3, CMKBR6, GPRCY4, STRL22, GPR-CY4)
ENST00000366832.7	NP_001138593.1
ENST00000366832.7	confirm experimentally
ENST00000366832.7	not best-in-genome evidence
ENST00000283507.6	confirm experimentally
ENST00000283507.6	not best-in-genome evidence
ENST00000366834.2	G protein-coupled receptor 31 (GPR31)
ENST00000366834.2	MANE_select
ENST00000660720.1	Assembled from RACEseq reads
ENST00000404577.1	novel pseudogene
ENST00000628362.2	CAGE supported TSS
ENST00000454185.1	putative novel transcript
ENST00000439207.1	putative novel transcript
ENST00000503433.5	alternative 5' UTR
ENST00000230256.8	MANE_select
ENST00000366829.2	NP_001137419.1
ENST00000649884.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000239587.10	MANE_select
ENST00000239587.10	NYD-TSPG protein
ENST00000397829.8	NP_004601.3
ENST00000648018.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000485157.1	alternative 5' UTR
ENST00000670373.1	Assembled from SLRseq reads (SRP049776)
ENST00000662677.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000400831.2	novel tanscript (FLJ32038)
ENST00000667387.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654811.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000644320.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000392115.2	serine palmitoyltransferase, long chain base subunit 2 (SPTLC2) (LCB2) pseudogene
ENST00000495520.5	novel protein (HGC6.2)
ENST00000366822.3	Assembled from SLRseq reads (SRP049776)
ENST00000366822.3	novel protein (HGC6.2)
ENST00000597278.2	confirm experimentally
ENST00000669546.2	Extended using: Assembled from SLRseq reads (SRP049776)
ENST00000663809.1	Assembled from SLRseq reads (SRP049776)
ENST00000425438.1	novel transcript
ENST00000417244.1	novel transcript
ENST00000441716.2	novel transcript
ENST00000456585.5	HGC6.1.1 protein
ENST00000663121.1	Assembled from SLRseq reads (SRP049776)
ENST00000414364.1	HGC6.1.1 protein
ENST00000443060.6	alternative 5' UTR
ENST00000652547.1	kinesin-like 3
ENST00000644536.1	kinesin-like 3
ENST00000645382.1	kinesin-like 3
ENST00000646385.1	CAGE supported TSS
ENST00000644440.1	CAGE supported TSS
ENST00000644440.1	upstream uORF
ENST00000440994.6	NP_001116313.1
ENST00000336070.11	CAGE supported TSS
ENST00000457340.1	novel transcript
ENST00000654363.1	Assembled from SLRseq reads (SRP049776)
ENST00000424343.1	novel transcript
ENST00000446811.1	novel transcript (FLJ31232)
ENST00000446811.1	this gene fragment and fragment bA503C24.3 could be part of one gene
ENST00000416709.1	meningioma expressed antigen 6 (coiled-coil proline-rich) (MGEA6) pseudogene
ENST00000366795.4	MANE_select
ENST00000356284.7	MANE_select
ENST00000436492.1	novel transcript
ENST00000669060.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668153.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669233.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000444586.1	novel transcript
ENST00000648992.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000419800.1	novel transcript
ENST00000666733.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666415.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413324.1	putative novel transcript
ENST00000435377.1	putative novel transcript
ENST00000657062.1	Assembled from SLRseq reads (SRP049776)
ENST00000657431.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000564830.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660724.1	Assembled from SLRseq reads (SRP049776)
ENST00000444188.2	Assembled from SLRseq reads (SRP049776)
ENST00000670651.1	Assembled from SLRseq reads (SRP049776)
ENST00000366787.7	NP_003238.2
ENST00000617924.6	MANE_select
ENST00000617924.6	alternative 5' UTR
ENST00000649844.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000676760.1	alternative 5' UTR
ENST00000676498.1	alternative 5' UTR
ENST00000435791.1	alternative 5' UTR
ENST00000433388.5	putative novel transcript
ENST00000440168.1	putative novel transcript (FLJ21008)
ENST00000479310.5	novel transcript
ENST00000448612.6	LR annotation
ENST00000448612.6	MANE_select
ENST00000467418.1	novel transcript
ENST00000486490.1	novel transcript
ENST00000474018.1	alternative 5' UTR
ENST00000339209.9	MANE_select
ENST00000339209.9	NP_060758
ENST00000366780.8	NP_579866
ENST00000413088.1	novel transcript
ENST00000430250.1	putative novel transcript
ENST00000366774.4	MANE_select
ENST00000366774.4	t-complex-associated-testis-expressed 3
ENST00000366773.8	MANE_select
ENST00000592315.5	NAGNAG splice site
ENST00000588451.1	not organism-supported
ENST00000437615.1	FLJ31451
ENST00000648769.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000420557.3	Assembled from SLRseq reads (SRP049776)
ENST00000427017.1	putative novel transcript
ENST00000654612.1	CAGE supported TSS
ENST00000663924.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664187.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650857.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000429305.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000429305.2	putative novel transcript
ENST00000405880.1	ribosomal protein L12 (RPL12)
ENST00000452071.1	Novel transcript (FLJ25454)
ENST00000422894.5	novel transcript
ENST00000438622.1	novel transcript
ENST00000366756.4	MANE_select
ENST00000366756.4	delta-like 1 (Drosophila)
ENST00000476287.4	MANE_select
ENST00000476287.4	novel protein
ENST00000476287.4	novel protein (KIAA1838)
ENST00000496635.1	Putative novel transcript
ENST00000262193.7	MANE_select
ENST00000462957.1	proteasome subunit HC5
ENST00000421512.5	alternative 5' UTR
ENST00000392092.7	MANE_select
ENST00000392092.7	genebuild_only_MANE
ENST00000423353.1	alternative 5' UTR
ENST00000446829.1	TATA box binding protein (GTF2D, SCA17, TFIID)
ENST00000446829.1	this variant and either of variant fragments dJ191N21.2.2 or dJ191N21.2.1 could be part of one single variant
ENST00000541970.6	MANE_select
ENST00000541970.6	Programmed cell death 2
ENST00000453163.6	Programmed cell death 2
ENST00000453163.6	confirm experimentally
ENST00000667394.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656791.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000426839.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000426839.2	Putative novel transcript
ENST00000438217.1	Putative novel transcript
ENST00000670727.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000448824.1	Putative novel transcript
ENST00000415530.1	Putative novel transcript
ENST00000633163.1	not best-in-genome evidence
ENST00000655297.1	Assembled from SLRseq reads (SRP049776)
ENST00000462565.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658260.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661789.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659412.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655134.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660888.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655278.1	Assembled from SLRseq reads (SRP049776)
ENST00000665089.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663267.1	Assembled from SLRseq reads (SRP049776)
ENST00000667371.1	Assembled from SLRseq reads (SRP049776)
ENST00000653553.1	Assembled from SLRseq reads (SRP049776)
ENST00000479592.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664368.1	Assembled from SLRseq reads (SRP049776)
ENST00000648846.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000670013.1	Assembled from SLRseq reads (SRP049776)
ENST00000659509.1	Assembled from SLRseq reads (SRP049776)
ENST00000664509.1	Assembled from SLRseq reads (SRP049776)
ENST00000652788.1	Assembled from SLRseq reads (SRP049776)
ENST00000665027.1	Assembled from SLRseq reads (SRP049776)
ENST00000405692.2	alternative 5' UTR
ENST00000426681.2	not organism-supported
ENST00000663680.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662957.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656962.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000406797.5	alternative 5' UTR
ENST00000537384.6	MANE_select
ENST00000537384.6	genebuild_only_MANE
ENST00000403562.5	alternative 5' UTR
ENST00000430040.5	alternative 5' UTR
ENST00000417852.5	alternative 5' UTR
ENST00000456696.2	alternative 5' UTR
ENST00000297440.11	MANE_select
ENST00000389574.7	NP_079430.3
ENST00000435699.5	alternative 5' UTR
ENST00000440380.5	alternative 5' UTR
ENST00000439679.5	alternative 5' UTR
ENST00000424128.5	alternative 5' UTR
ENST00000457598.5	alternative 5' UTR
ENST00000421580.5	alternative 5' UTR
ENST00000401592.6	MANE_select
ENST00000401592.6	NP_001124437.1
ENST00000265857.8	MANE_select
ENST00000412734.6	alternative 5' UTR
ENST00000265846.10	MANE_select
ENST00000649206.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000344111.4	MANE_select
ENST00000308919.12	MANE_select
ENST00000397098.8	MANE_select
ENST00000397098.8	alternative 5' UTR
ENST00000491163.1	alternative 5' UTR
ENST00000444847.2	CAGE supported TSS
ENST00000444847.2	MANE_select
ENST00000444847.2	alternative 5' UTR
ENST00000427680.1	alternative 5' UTR
ENST00000401670.1	alternative 5' UTR
ENST00000413368.5	alternative 5' UTR
ENST00000397088.4	MANE_select
ENST00000397088.4	alternative 5' UTR
ENST00000316495.8	MANE_select
ENST00000423008.2	Assembled from SLRseq reads (SRP049776)
ENST00000660500.1	Assembled from SLRseq reads (SRP049776)
ENST00000662926.1	Assembled from SLRseq reads (SRP049776)
ENST00000659975.1	Assembled from SLRseq reads (SRP049776)
ENST00000413706.1	QC splicing correct
ENST00000655003.1	Assembled from SLRseq reads (SRP049776)
ENST00000316333.9	MANE_select
ENST00000297508.8	MANE_select
ENST00000404767.8	MANE_select
ENST00000343242.9	MANE_select
ENST00000406174.2	alternative 5' UTR
ENST00000297477.10	MANE_select
ENST00000414730.5	alternative 5' UTR
ENST00000441933.5	alternative 5' UTR
ENST00000431208.1	alternative 5' UTR
ENST00000288607.3	MANE_select
ENST00000404674.7	alternative 5' UTR
ENST00000252329.3	alternative 5' UTR
ENST00000651857.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000649710.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000406869.5	alternative 5' UTR
ENST00000265854.12	CAGE supported TSS
ENST00000265854.12	MANE_select
ENST00000265854.12	alternative 5' UTR
ENST00000429779.1	alternative 5' UTR
ENST00000651235.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000651235.1	ID: align_id:3732539|asmbl_222704
ENST00000651235.1	SLR-seq_HsBN_lib8 : HsBN_lib8:Read_5771-Barcode=BC067:length=2500, HsBN_lib8:Read_170725-Barcode=BC209:length=1747, HsBN_lib8:Read_132959-Barcode=BC085:length=1972, HsBN_lib8:Read_125083-Barcode=BC286:length=2488, HsBN_lib8:Read_144511-Barcode=BC237:length=2483, HsBN_lib8:Read_429646-Barcode=BC324:length=731, HsBN_lib8:Read_450750-Barcode=BC023:length=608, HsBN_lib8:Read_89042-Barcode=BC214:length=1979, HsBN_lib8:Read_365311-Barcode=BC024:length=588, HsBN_lib8:Read_430125-Barcode=BC324:length=555 ; SLR-seq_HsBN_lib10 : HsBN_lib10:Read_113184-Barcode=BC285:length=2273, HsBN_lib10:Read_428420-Barcode=BC111:length=638, HsBN_lib10:Read_429118-Barcode=BC015:length=524, HsBN_lib10:Read_400273-Barcode=BC316:length=870, HsBN_lib10:Read_152436-Barcode=BC166:length=2581, HsBN_lib10:Read_459763-Barcode=BC301:length=567, HsBN_lib10:Read_264536-Barcode=BC091:length=2023, HsBN_lib10:Read_309135-Barcode=BC274:length=1318, HsBN_lib10:Read_287301-Barcode=BC227:length=636, HsBN_lib10:Read_456688-Barcode=BC124:length=724, HsBN_lib10:Read_122086-Barcode=BC307:length=2309, HsBN_lib10:Read_453683-Barcode=BC187:length=692, HsBN_lib10:Read_330826-Barcode=BC290:length=1310 ; SLR-seq_HsBN_lib12 : HsBN_lib12:Read_401160-Barcode=BC115:length=1255, HsBN_lib12:Read_495629-Barcode=BC021:length=583, HsBN_lib12:Read_51060-Barcode=BC183:length=2488, HsBN_lib12:Read_366721-Barcode=BC326:length=1149, HsBN_lib12:Read_354132-Barcode=BC318:length=926, HsBN_lib12:Read_124046-Barcode=BC286:length=2394, HsBN_lib12:Read_266932-Barcode=BC104:length=1904, HsBN_lib12:Read_66045-Barcode=BC169:length=2499, HsBN_lib12:Read_303855-Barcode=BC072:length=612, HsBN_lib12:Read_58259-Barcode=BC177:length=2137, HsBN_lib12:Read_370576-Barcode=BC305:length=912, HsBN_lib12:Read_11726-Barcode=BC353:length=2498, HsBN_lib12:Read_371644-Barcode=BC034:length=540, HsBN_lib12:Read_34195-Barcode=BC251:length=2505, HsBN_lib12:Read_262982-Barcode=BC129:length=1929, HsBN_lib12:Read_218313-Barcode=BC178:length=2613, HsBN_lib12:Read_209604-Barcode=BC382:length=2104, HsBN_lib12:Read_134868-Barcode=BC102:length=2510, HsBN_lib12:Read_353469-Barcode=BC017:length=560, HsBN_lib12:Read_292579-Barcode=BC374:length=515, HsBN_lib12:Read_329653-Barcode=BC358:length=701 ; SLR-seq_HsBN_lib7 : HsBN_lib7:Read_503154-Barcode=BC226:length=621, HsBN_lib7:Read_228925-Barcode=BC254:length=2473, HsBN_lib7:Read_198836-Barcode=BC111:length=2507, HsBN_lib7:Read_226632-Barcode=BC250:length=2451, HsBN_lib7:Read_379541-Barcode=BC100:length=911, HsBN_lib7:Read_379266-Barcode=BC100:length=1070, HsBN_lib7:Read_253019-Barcode=BC367:length=2332, HsBN_lib7:Read_20273-Barcode=BC225:length=2496, HsBN_lib7:Read_159144-Barcode=BC258:length=2346, HsBN_lib7:Read_466348-Barcode=BC094:length=564, HsBN_lib7:Read_234241-Barcode=BC006:length=2458, HsBN_lib7:Read_401353-Barcode=BC330:length=572, HsBN_lib7:Read_76649-Barcode=BC198:length=2597, HsBN_lib7:Read_391487-Barcode=BC075:length=1120, HsBN_lib7:Read_173146-Barcode=BC130:length=2072 ; SLR-seq_TB0000033 : TB0000033-DNA_A01-LRAAD-01:Read_339743-Barcode=BC199:length=685, TB0000033-DNA_A01-LRAAD-01:Read_243190-Barcode=BC360:length=2606, TB0000033-DNA_A01-LRAAD-01:Read_365153-Barcode=BC262:length=589, TB0000033-DNA_A01-LRAAD-01:Read_72760-Barcode=BC109:length=2594, TB0000033-DNA_A01-LRAAD-01:Read_159203-Barcode=BC238:length=2258, TB0000033-DNA_A01-LRAAD-01:Read_224872-Barcode=BC332:length=2596, TB0000033-DNA_A01-LRAAD-01:Read_327771-Barcode=BC169:length=967, TB0000033-DNA_A01-LRAAD-01:Read_125948-Barcode=BC188:length=2264, TB0000033-DNA_A01-LRAAD-01:Read_351931-Barcode=BC231:length=515, TB0000033-DNA_A01-LRAAD-01:Read_329334-Barcode=BC173:length=658, TB0000033-DNA_A01-LRAAD-01:Read_8994-Barcode=BC016:length=2498, TB0000033-DNA_A01-LRAAD-01:Read_327739-Barcode=BC169:length=549, TB0000033-DNA_A01-LRAAD-01:Read_365147-Barcode=BC262:length=807, TB0000033-DNA_A01-LRAAD-01:Read_90149-Barcode=BC135:length=2499, TB0000033-DNA_A01-LRAAD-01:Read_76214-Barcode=BC115:length=2527, TB0000033-DNA_A01-LRAAD-01:Read_102553-Barcode=BC155:length=2531 ; SLR-seq_TB0000032 : TB0000032-DNA_A01-LRAAD-01:Read_402272-Barcode=BC336:length=921, TB0000032-DNA_A01-LRAAD-01:Read_419691-Barcode=BC377:length=956, TB0000032-DNA_A01-LRAAD-01:Read_284556-Barcode=BC052:length=544, TB0000032-DNA_A01-LRAAD-01:Read_108272-Barcode=BC157:length=2497, TB0000032-DNA_A01-LRAAD-01:Read_100062-Barcode=BC145:length=2482, TB0000032-DNA_A01-LRAAD-01:Read_368943-Barcode=BC254:length=1212, TB0000032-DNA_A01-LRAAD-01:Read_14901-Barcode=BC024:length=2577, TB0000032-DNA_A01-LRAAD-01:Read_348559-Barcode=BC205:length=993, TB0000032-DNA_A01-LRAAD-01:Read_38519-Barcode=BC058:length=2201, TB0000032-DNA_A01-LRAAD-01:Read_284642-Barcode=BC052:length=522, TB0000032-DNA_A01-LRAAD-01:Read_29156-Barcode=BC044:length=2348, TB0000032-DNA_A01-LRAAD-01:Read_73597-Barcode=BC109:length=1554, TB0000032-DNA_A01-LRAAD-01:Read_411673-Barcode=BC357:length=691, TB0000032-DNA_A01-LRAAD-01:Read_361279-Barcode=BC236:length=1456, TB0000032-DNA_A01-LRAAD-01:Read_285704-Barcode=BC055:length=750 ; SLR-seq_TB0000034 : TB0000034-DNA_A01-LRAAD-01:Read_382221-Barcode=BC267:length=589, TB0000034-DNA_A01-LRAAD-01:Read_267814-Barcode=BC004:length=864, TB0000034-DNA_A01-LRAAD-01:Read_313042-Barcode=BC110:length=950, TB0000034-DNA_A01-LRAAD-01:Read_354890-Barcode=BC207:length=749, TB0000034-DNA_A01-LRAAD-01:Read_372588-Barcode=BC248:length=619, TB0000034-DNA_A01-LRAAD-01:Read_354889-Barcode=BC207:length=1049, TB0000034-DNA_A01-LRAAD-01:Read_228473-Barcode=BC328:length=2497, TB0000034-DNA_A01-LRAAD-01:Read_399530-Barcode=BC309:length=782, TB0000034-DNA_A01-LRAAD-01:Read_266014-Barcode=BC384:length=2448, TB0000034-DNA_A01-LRAAD-01:Read_9089-Barcode=BC014:length=2464, TB0000034-DNA_A01-LRAAD-01:Read_111761-Barcode=BC159:length=2463, TB0000034-DNA_A01-LRAAD-01:Read_227698-Barcode=BC327:length=2341, TB0000034-DNA_A01-LRAAD-01:Read_51111-Barcode=BC075:length=2608, TB0000034-DNA_A01-LRAAD-01:Read_232392-Barcode=BC333:length=2513 ; SLR-seq_HsBN_lib6 : HsBN_lib6:Read_330064-Barcode=BC278:length=1148, HsBN_lib6:Read_483062-Barcode=BC071:length=591, HsBN_lib6:Read_363110-Barcode=BC337:length=500, HsBN_lib6:Read_134952-Barcode=BC196:length=2472, HsBN_lib6:Read_184742-Barcode=BC248:length=1503, HsBN_lib6:Read_66907-Barcode=BC203:length=2455, HsBN_lib6:Read_284032-Barcode=BC067:length=940, HsBN_lib6:Read_33770-Barcode=BC263:length=2047, HsBN_lib6:Read_178419-Barcode=BC378:length=2611, HsBN_lib6:Read_362658-Barcode=BC337:length=748, HsBN_lib6:Read_249569-Barcode=BC291:length=2502, HsBN_lib6:Read_237619-Barcode=BC354:length=2509, HsBN_lib6:Read_100256-Barcode=BC230:length=2564, HsBN_lib6:Read_303201-Barcode=BC242:length=690, HsBN_lib6:Read_137296-Barcode=BC061:length=2215, HsBN_lib6:Read_492558-Barcode=BC129:length=511, HsBN_lib6:Read_467298-Barcode=BC022:length=562 ; SLR-seq_HsBN_lib9 : HsBN_lib9:Read_289767-Barcode=BC212:length=626, HsBN_lib9:Read_358755-Barcode=BC243:length=606, HsBN_lib9:Read_297622-Barcode=BC147:length=549, HsBN_lib9:Read_122566-Barcode=BC252:length=2418, HsBN_lib9:Read_355979-Barcode=BC348:length=831, HsBN_lib9:Read_199758-Barcode=BC210:length=2458, HsBN_lib9:Read_466792-Barcode=BC149:length=831, HsBN_lib9:Read_289344-Barcode=BC212:length=536, HsBN_lib9:Read_291321-Barcode=BC255:length=940, HsBN_lib9:Read_202290-Barcode=BC241:length=2525, HsBN_lib9:Read_302315-Barcode=BC235:length=860, HsBN_lib9:Read_405435-Barcode=BC258:length=612, HsBN_lib9:Read_77066-Barcode=BC204:length=2495, HsBN_lib9:Read_16252-Barcode=BC147:length=2417, HsBN_lib9:Read_145976-Barcode=BC330:length=1658, HsBN_lib9:Read_150524-Barcode=BC306:length=2422, HsBN_lib9:Read_50256-Barcode=BC096:length=1726, HsBN_lib9:Read_390329-Barcode=BC208:length=773 ; SLR-seq_HsBN_lib11 : HsBN_lib11:Read_485279-Barcode=BC340:length=1002, HsBN_lib11:Read_393515-Barcode=BC048:length=1061, HsBN_lib11:Read_50022-Barcode=BC084:length=2464, HsBN_lib11:Read_482445-Barcode=BC091:length=552, HsBN_lib11:Read_442211-Barcode=BC375:length=1010, HsBN_lib11:Read_393466-Barcode=BC048:length=542, HsBN_lib11:Read_1123-Barcode=BC257:length=2404, HsBN_lib11:Read_90334-Barcode=BC229:length=1976, HsBN_lib11:Read_406100-Barcode=BC209:length=943, HsBN_lib11:Read_136017-Barcode=BC208:length=2483, HsBN_lib11:Read_485277-Barcode=BC340:length=563, HsBN_lib11:Read_179379-Barcode=BC127:length=2500, HsBN_lib11:Read_383256-Barcode=BC332:length=517, HsBN_lib11:Read_220108-Barcode=BC081:length=2315, HsBN_lib11:Read_50014-Barcode=BC014:length=2411, HsBN_lib11:Read_439035-Barcode=BC232:length=1201, HsBN_lib11:Read_322923-Barcode=BC177:length=716, HsBN_lib11:Read_312855-Barcode=BC274:length=803, HsBN_lib11:Read_319230-Barcode=BC247:length=954, HsBN_lib11:Read_22840-Barcode=BC269:length=2496, HsBN_lib11:Read_337703-Barcode=BC026:length=1145, HsBN_lib11:Read_441969-Barcode=BC375:length=858, HsBN_lib11:Read_128250-Barcode=BC179:length=2560, HsBN_lib11:Read_39300-Barcode=BC245:length=2525, HsBN_lib11:Read_428501-Barcode=BC015:length=1045 ; SLR-seq_TB0000035 : TB0000035-DNA_A01-LRAAD-01:Read_95018-Barcode=BC138:length=2481, TB0000035-DNA_A01-LRAAD-01:Read_13399-Barcode=BC020:length=2500, TB0000035-DNA_A01-LRAAD-01:Read_173497-Barcode=BC251:length=2163, TB0000035-DNA_A01-LRAAD-01:Read_170052-Barcode=BC246:length=2523, TB0000035-DNA_A01-LRAAD-01:Read_329616-Barcode=BC165:length=544, TB0000035-DNA_A01-LRAAD-01:Read_406080-Barcode=BC358:length=1097, TB0000035-DNA_A01-LRAAD-01:Read_237961-Barcode=BC345:length=2492, TB0000035-DNA_A01-LRAAD-01:Read_329617-Barcode=BC165:length=690, TB0000035-DNA_A01-LRAAD-01:Read_293754-Barcode=BC077:length=626, TB0000035-DNA_A01-LRAAD-01:Read_342224-Barcode=BC198:length=1277, TB0000035-DNA_A01-LRAAD-01:Read_154738-Barcode=BC224:length=2213, TB0000035-DNA_A01-LRAAD-01:Read_329615-Barcode=BC165:length=790 ;
ENST00000242257.14	MANE_select
ENST00000356714.6	MANE_select
ENST00000397046.5	alternative 5' UTR
ENST00000397048.5	alternative 5' UTR
ENST00000454650.1	alternative 5' UTR
ENST00000339737.6	alternative 5' UTR
ENST00000222990.8	MANE_select
ENST00000457286.5	alternative 5' UTR
ENST00000419693.1	alternative 5' UTR
ENST00000360876.9	MANE_select
ENST00000360876.9	alternative 3' UTR
ENST00000618655.2	MANE_select
ENST00000432336.1	alternative 5' UTR
ENST00000222725.10	MANE_select
ENST00000340611.9	MANE_select
ENST00000402050.7	MANE_select
ENST00000611775.4	NP_001274429.1
ENST00000423395.5	alternative 5' UTR
ENST00000422276.3	alternative 5' UTR
ENST00000258796.12	MANE_select
ENST00000275364.8	MANE_select
ENST00000396946.9	MANE_select
ENST00000396946.9	NP_115791
ENST00000356408.3	alternative 5' UTR
ENST00000667422.1	Assembled from RACEseq reads
ENST00000404826.7	MANE_select
ENST00000404826.7	QC splicing correct
ENST00000389531.7	QC splicing correct
ENST00000389531.7	confirm experimentally
ENST00000667321.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000328914.5	MANE_select
ENST00000658333.1	Assembled from SLRseq reads (SRP049776)
ENST00000649063.2	CAGE supported TSS
ENST00000649063.2	LR annotation
ENST00000649063.2	MANE_select
ENST00000399583.4	MANE_select
ENST00000457174.1	alternative 5' UTR
ENST00000404991.2	MANE_select
ENST00000401401.8	MANE_select
ENST00000401401.8	NP_940685
ENST00000353796.7	NP_066986
ENST00000396912.2	MANE_select
ENST00000396912.2	genebuild_only_MANE
ENST00000641781.1	ENA ID EGAS00001001486
ENST00000641483.1	ENA ID EGAS00001001486
ENST00000401525.7	NP_057087
ENST00000288828.9	MANE_select
ENST00000404704.7	NP_001028690
ENST00000382384.6	NP_001028691
ENST00000434816.5	alternative 5' UTR
ENST00000396872.8	MANE_select
ENST00000396872.8	NP_001035751
ENST00000444741.5	alternative 5' UTR
ENST00000297195.8	alternative 5' UTR
ENST00000434361.5	alternative 5' UTR
ENST00000609130.1	CAGE supported TSS
ENST00000608012.1	CAGE supported TSS
ENST00000382368.8	MANE_select
ENST00000674681.1	alternative 5' UTR
ENST00000642480.2	alternative 5' UTR
ENST00000646664.1	LR annotation
ENST00000646664.1	MANE_select
ENST00000464611.1	alternative 3' UTR
ENST00000675515.1	alternative 5' UTR
ENST00000493945.6	TB0000032-DNA_A01-LRAAD-01:Read_394064-Barcode%3DBC316:length%3D1495
ENST00000493945.6	alternative 5' UTR
ENST00000484841.6	NMD likely if extended
ENST00000443528.5	CAGE supported TSS
ENST00000443528.5	alternative 5' UTR
ENST00000417101.2	alternative 5' UTR
ENST00000417101.2	upstream ATG
ENST00000414620.1	alternative 5' UTR
ENST00000382361.8	MANE_select
ENST00000447103.5	alternative 5' UTR
ENST00000405801.2	alternative 5' UTR
ENST00000389902.8	MANE_select
ENST00000484458.2	QC splicing correct
ENST00000416985.5	QC splicing correct
ENST00000416985.5	alternative 5' UTR
ENST00000476345.1	QC splicing correct
ENST00000416608.5	alternative 5' UTR
ENST00000325974.9	MANE_select
ENST00000404406.5	alternative 5' UTR
ENST00000542644.1	alternative 5' UTR
ENST00000455618.2	alternative 5' UTR
ENST00000265849.12	MANE_select
ENST00000406569.7	NMD likely if extended
ENST00000223029.8	MANE_select
ENST00000199389.11	MANE_select
ENST00000409061.2	MANE_select
ENST00000670544.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451154.5	QC splicing correct
ENST00000350796.8	MANE_select
ENST00000313324.9	MANE_select
ENST00000524898.1	alternative 5' UTR
ENST00000530143.1	alternative 5' UTR
ENST00000348035.9	MANE_select
ENST00000297056.11	MANE_select
ENST00000258739.9	MANE_select
ENST00000457091.2	confirm experimentally
ENST00000405731.7	alternative 5' UTR
ENST00000335965.11	MANE_select
ENST00000335965.11	alternative 5' UTR
ENST00000396709.5	alternative 5' UTR
ENST00000483589.5	alternative 5' UTR
ENST00000344417.10	MANE_select
ENST00000457543.4	MANE_select
ENST00000382252.6	MANE_select
ENST00000666662.1	Assembled from SLRseq reads (SRP049776)
ENST00000405858.6	MANE_select
ENST00000405858.6	NP_057349
ENST00000342651.9	NP_008887
ENST00000403107.5	NP_001093167.1
ENST00000404077.5	alternative 5' UTR
ENST00000435395.5	alternative 5' UTR
ENST00000418406.1	alternative 5' UTR
ENST00000316731.13	MANE_select
ENST00000316731.13	NP_056437
ENST00000671358.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000429911.5	alternative 5' UTR
ENST00000436587.7	CAGE supported TSS
ENST00000436587.7	MANE_select
ENST00000436587.7	alternative 5' UTR
ENST00000430266.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430266.2	QC splicing correct
ENST00000659742.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657192.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655022.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430711.5	QC splicing correct
ENST00000453441.1	alternative 5' UTR
ENST00000399429.8	MANE_select
ENST00000399429.8	NP_001032852
ENST00000609497.5	CAGE supported TSS
ENST00000405785.5	alternative 5' UTR
ENST00000340080.9	MANE_select
ENST00000340080.9	NP_061878
ENST00000433635.1	alternative 5' UTR
ENST00000456533.1	alternative 5' UTR
ENST00000433056.5	alternative 5' UTR
ENST00000445169.1	alternative 5' UTR
ENST00000223129.8	MANE_select
ENST00000401447.1	alternative 5' UTR
ENST00000493246.5	QC splicing correct
ENST00000463725.5	alternative 3' UTR
ENST00000469183.5	NMD likely if extended
ENST00000469183.5	QC splicing correct
ENST00000223145.10	MANE_select
ENST00000496617.2	QC splicing correct
ENST00000402384.8	MANE_select
ENST00000650486.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000396675.7	alternative 5' UTR
ENST00000401396.5	QC splicing correct
ENST00000317367.9	alternative 5' UTR
ENST00000447326.5	alternative 5' UTR
ENST00000430867.5	alternative 5' UTR
ENST00000446305.1	alternative 5' UTR
ENST00000424460.1	QC splicing correct
ENST00000435967.1	QC splicing correct
ENST00000405863.6	MANE_select
ENST00000438764.1	alternative 5' UTR
ENST00000429542.1	alternative 5' UTR
ENST00000614289.1	Evidence: AB593138.1
ENST00000612945.4	Evidence: AB593137.1
ENST00000614137.1	Evidence: AB593139.1
ENST00000657272.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668655.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663710.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451755.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451755.2	Assembled from SLRseq reads (SRP049776)
ENST00000671028.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654800.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656131.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000339600.6	MANE_select
ENST00000492822.1	non canonical TEC
ENST00000642461.1	CAGE supported TSS
ENST00000403050.7	KIAA0783
ENST00000634607.2	MANE_select
ENST00000469407.5	FLJ41528
ENST00000423059.9	MANE_select
ENST00000423059.9	NP_056019.1
ENST00000497575.1	not organism-supported
ENST00000396668.8	MANE_select
ENST00000396668.8	alternative 5' UTR
ENST00000444443.5	alternative 5' UTR
ENST00000453686.1	NMD likely if extended
ENST00000442107.1	alternative 5' UTR
ENST00000275358.8	MANE_select
ENST00000418428.6	QC splicing correct
ENST00000297029.10	MANE_select
ENST00000356797.7	alternative 5' UTR
ENST00000396664.2	alternative 5' UTR
ENST00000439721.1	alternative 5' UTR
ENST00000651779.1	MANE_select
ENST00000651779.1	genebuild_only_MANE
ENST00000404894.1	alternative 5' UTR
ENST00000658555.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669103.1	Assembled from SLRseq reads (SRP049776)
ENST00000656893.1	Assembled from SLRseq reads (SRP049776)
ENST00000657198.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663907.1	Assembled from SLRseq reads (SRP049776)
ENST00000654062.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430479.6	MANE_select
ENST00000430479.6	NP_004947.2
ENST00000430479.6	non canonical conserved
ENST00000405358.8	non canonical conserved
ENST00000403527.5	non canonical conserved
ENST00000405218.6	alternative 5' UTR
ENST00000405218.6	non canonical conserved
ENST00000443137.5	non canonical conserved
ENST00000403685.5	non canonical conserved
ENST00000472931.6	non canonical conserved
ENST00000438956.5	non canonical conserved
ENST00000421381.5	alternative 5' UTR
ENST00000431887.5	alternative 5' UTR
ENST00000433547.1	alternative 5' UTR
ENST00000402815.6	MANE_select
ENST00000402815.6	alternative 5' UTR
ENST00000403951.6	NP_004071.1
ENST00000407950.5	alternative 5' UTR
ENST00000406247.7	NP_663733.1
ENST00000437998.1	alternative 5' UTR
ENST00000463981.2	NMD likely if extended
ENST00000342526.8	MANE_select
ENST00000262041.6	MANE_select
ENST00000663069.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659664.1	Assembled from RACEseq reads
ENST00000407010.7	MANE_select
ENST00000399310.3	not organism-supported
ENST00000663812.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000655000.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000307068.5	MANE_select
ENST00000401542.3	MANE_select
ENST00000306999.7	MANE_select
ENST00000421746.1	NMD likely if extended
ENST00000663260.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000415365.5	alternative 5' UTR
ENST00000432311.5	NMD likely if extended
ENST00000258761.8	MANE_select
ENST00000446596.5	alternative 5' UTR
ENST00000438834.5	alternative 5' UTR
ENST00000430000.1	alternative 5' UTR
ENST00000262067.5	MANE_select
ENST00000419304.7	MANE_select
ENST00000412973.1	alternative 5' UTR
ENST00000310398.7	MANE_select
ENST00000645559.1	CAGE supported TSS
ENST00000642825.1	CAGE supported TSS
ENST00000242057.9	MANE_select
ENST00000463496.1	CCDS name: CCDS5366.1
ENST00000659951.1	Assembled from SLRseq reads (SRP049776)
ENST00000659284.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671621.1	Assembled from SLRseq reads (SRP049776)
ENST00000670927.1	Assembled from SLRseq reads (SRP049776)
ENST00000666752.1	Assembled from SLRseq reads (SRP049776)
ENST00000654641.1	Assembled from SLRseq reads (SRP049776)
ENST00000665788.1	Assembled from SLRseq reads (SRP049776)
ENST00000658415.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664658.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000454003.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658953.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659688.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657616.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655831.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659904.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668924.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656566.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662264.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665552.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663308.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652982.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654345.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670938.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660262.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000428135.7	MANE_select
ENST00000444712.5	QC splicing correct
ENST00000625121.1	confirm experimentally
ENST00000624307.1	confirm experimentally
ENST00000506618.5	MANE_select
ENST00000433709.6	alternative 5' UTR
ENST00000413509.6	alternative 5' UTR
ENST00000413380.5	alternative 5' UTR
ENST00000406451.8	NP_848510
ENST00000441986.5	alternative 5' UTR
ENST00000456174.6	alternative 5' UTR
ENST00000242261.6	MANE_select
ENST00000659464.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000222567.6	MANE_select
ENST00000405844.6	MANE_select
ENST00000405764.7	NP_689987.3
ENST00000656115.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000400331.10	MANE_select
ENST00000332878.8	alternative 5' UTR
ENST00000589011.1	alternative 5' UTR
ENST00000664310.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446399.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669632.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668568.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669469.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668992.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000222573.5	MANE_select
ENST00000418710.3	MANE_select
ENST00000361443.4	NP_945194.1
ENST00000661032.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000649509.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000432066.2	QC splicing correct
ENST00000448246.1	QC splicing correct
ENST00000222584.8	MANE_select
ENST00000649633.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000409508.8	MANE_select
ENST00000607413.5	CAGE supported TSS
ENST00000406877.8	MANE_select
ENST00000435031.1	alternative 5' UTR
ENST00000665637.1	MANE_select
ENST00000678116.1	MANE_select
ENST00000678116.1	NM_001382447.1
ENST00000678116.1	SRA|ERR3218374.209297
ENST00000424363.5	alternative 5' UTR
ENST00000439708.1	alternative 5' UTR
ENST00000658234.1	Assembled from SLRseq reads (SRP049776)
ENST00000426291.5	alternative 5' UTR
ENST00000258743.10	MANE_select
ENST00000258743.10	genebuild_only_MANE
ENST00000358435.9	MANE_select
ENST00000669358.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000415611.8	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667557.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000422542.4	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656301.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661147.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662021.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656687.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656687.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000657608.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663057.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658124.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661582.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671680.1	Assembled from SLRseq reads (SRP049776)
ENST00000432176.7	MANE_select
ENST00000681468.1	NMD likely if extended
ENST00000662806.1	Assembled from SLRseq reads (SRP049776)
ENST00000419813.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000419813.2	Assembled from SLRseq reads (SRP049776)
ENST00000339077.10	MANE_select
ENST00000409689.5	NP_061334.4
ENST00000648537.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000413042.3	CAGE supported TSS
ENST00000381990.6	NP_001005340.1
ENST00000647578.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000258733.9	MANE_select
ENST00000258733.9	NP_002501.1
ENST00000466681.2	MANE_select
ENST00000258729.8	MANE_select
ENST00000469723.5	QC splicing correct
ENST00000297071.9	MANE_select
ENST00000307471.8	MANE_select
ENST00000409765.5	alternative 5' UTR
ENST00000448353.5	alternative 5' UTR
ENST00000410069.1	alternative 5' UTR
ENST00000344962.9	MANE_select
ENST00000355870.8	MANE_select
ENST00000456014.6	alternative 5' UTR
ENST00000531170.5	alternative 5' UTR
ENST00000444333.2	alternative 5' UTR
ENST00000407573.5	alternative 5' UTR
ENST00000242152.7	MANE_select
ENST00000405982.1	alternative 5' UTR
ENST00000662001.1	Assembled from RACEseq reads
ENST00000432190.5	alternative 5' UTR
ENST00000222644.10	MANE_select
ENST00000396475.6	alternative 5' UTR
ENST00000430180.5	alternative 5' UTR
ENST00000645220.1	CAGE supported TSS
ENST00000645220.1	LR annotation
ENST00000645220.1	MANE_select
ENST00000645220.1	alternative 5' UTR
ENST00000419307.6	alternative 5' UTR
ENST00000415480.5	NAGNAG splice site
ENST00000411476.3	NMD likely if extended
ENST00000666237.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000313367.7	MANE_select
ENST00000409759.5	PMID: 12590732, Collier et al. (2003) DNA Cell Biol 22
ENST00000415162.5	alternative 5' UTR
ENST00000441059.5	alternative 5' UTR
ENST00000415952.1	alternative 5' UTR
ENST00000305786.7	MANE_select
ENST00000409409.5	alternative 5' UTR
ENST00000409764.5	alternative 5' UTR
ENST00000413447.1	alternative 5' UTR
ENST00000283905.8	MANE_select
ENST00000409280.5	alternative 5' UTR
ENST00000443822.5	alternative 5' UTR
ENST00000415598.5	alternative 5' UTR
ENST00000444434.1	alternative 5' UTR
ENST00000222674.2	MANE_select
ENST00000649460.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000414127.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671584.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666558.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662242.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669800.1	Assembled from SLRseq reads (SRP049776)
ENST00000668357.1	Assembled from SLRseq reads (SRP049776)
ENST00000650415.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000656871.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000456777.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659793.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446840.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653704.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665149.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652906.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668233.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654115.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658568.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652885.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656897.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653559.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660499.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661813.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659634.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670917.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669861.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665954.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659238.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664945.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662377.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000423689.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671106.1	Assembled from SLRseq reads (SRP049776)
ENST00000661881.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659273.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666265.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000056233.4	MANE_select
ENST00000679318.1	align_id:1367095|asmbl_86998
ENST00000679318.1	align_id:3734038|asmbl_224203
ENST00000677339.1	align_id:3734012|asmbl_224177
ENST00000676903.1	align_id:3734029|asmbl_224194
ENST00000608362.2	align_id:3734030|asmbl_224195
ENST00000677631.1	align_id:3734034|asmbl_224199
ENST00000676749.1	align_id:3734037|asmbl_224202
ENST00000678035.1	align_id:3734015|asmbl_224180
ENST00000677075.1	align_id:3734039|asmbl_224204
ENST00000678183.1	align_id:3734054|asmbl_224219
ENST00000679021.1	align_id:3734040|asmbl_224205
ENST00000677906.1	align_id:3734018|asmbl_224183
ENST00000476233.2	align_id:3734055|asmbl_224220
ENST00000677669.1	align_id:3734047|asmbl_224212
ENST00000677321.1	align_id:3734049|asmbl_224214
ENST00000678277.1	align_id:3734046|asmbl_224211
ENST00000677571.1	align_id:3734051|asmbl_224216
ENST00000679124.1	align_id:3734042|asmbl_224207
ENST00000676932.1	align_id:3734053|asmbl_224218
ENST00000678973.1	align_id:3734048|asmbl_224213
ENST00000679123.1	align_id:3734013|asmbl_224178
ENST00000677574.1	align_id:3734007|asmbl_224172
ENST00000678998.1	align_id:3734026|asmbl_224191
ENST00000618183.5	MANE_select
ENST00000618183.5	align_id:3734009|asmbl_224174
ENST00000677839.1	align_id:3734021|asmbl_224186
ENST00000677037.1	align_id:3734080|asmbl_224245
ENST00000678675.1	align_id:3734065|asmbl_224230
ENST00000676746.1	align_id:3734064|asmbl_224229
ENST00000678962.1	align_id:3734022|asmbl_224187
ENST00000676524.1	align_id:3734027|asmbl_224192
ENST00000678935.1	align_id:3734024|asmbl_224189
ENST00000679001.1	align_id:3734017|asmbl_224182
ENST00000678449.1	align_id:3734008|asmbl_224173
ENST00000356674.8	align_id:3734063|asmbl_224228
ENST00000678697.1	align_id:3734025|asmbl_224190
ENST00000678431.1	align_id:3734010|asmbl_224175
ENST00000678779.1	align_id:3734028|asmbl_224193
ENST00000676497.1	align_id:3734031|asmbl_224196
ENST00000677396.1	align_id:3734033|asmbl_224198
ENST00000360787.8	align_id:3734057|asmbl_224222
ENST00000679243.1	align_id:3734011|asmbl_224176
ENST00000677656.1	align_id:3734032|asmbl_224197
ENST00000678884.1	align_id:3734036|asmbl_224201
ENST00000495810.2	align_id:3734078|asmbl_224243
ENST00000396386.7	MANE_select
ENST00000396386.7	alternative 5' UTR
ENST00000456948.5	alternative 5' UTR
ENST00000338523.9	MANE_select
ENST00000412416.5	alternative 5' UTR
ENST00000396376.5	alternative 5' UTR
ENST00000663469.1	Assembled from SLRseq reads (SRP049776)
ENST00000656289.1	Assembled from SLRseq reads (SRP049776)
ENST00000439120.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000421862.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653576.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000653576.1	Assembled from SLRseq reads (SRP049776)
ENST00000668828.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671222.1	Assembled from SLRseq reads (SRP049776)
ENST00000660902.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659679.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663961.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654666.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657230.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664882.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653790.1	Assembled from SLRseq reads (SRP049776)
ENST00000661822.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653226.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658860.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663877.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669588.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656424.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653091.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662959.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666369.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665801.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000623092.1	confirm experimentally
ENST00000667848.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000457000.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653682.1	Assembled from SLRseq reads (SRP049776)
ENST00000654600.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660447.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661238.1	Assembled from SLRseq reads (SRP049776)
ENST00000345317.7	MANE_select
ENST00000432747.1	alternative 5' UTR
ENST00000643460.2	LR annotation
ENST00000643460.2	MANE_select
ENST00000222718.7	MANE_select
ENST00000317201.6	alternative 5' UTR
ENST00000522788.5	alternative 5' UTR
ENST00000522456.1	alternative 5' UTR
ENST00000521401.1	alternative 5' UTR
ENST00000658768.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669815.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000517635.2	FLJ31668
ENST00000521687.5	QC splicing correct
ENST00000360046.10	MANE_select
ENST00000222726.4	MANE_select
ENST00000222728.3	MANE_select
ENST00000242159.5	MANE_select
ENST00000519842.1	CAGE supported TSS
ENST00000519842.1	alternative 5' UTR
ENST00000343483.7	MANE_select
ENST00000396345.1	NMD exception
ENST00000396345.1	This variant (called Hoxa9T) (Fujimoto et al 1998, PMID: 9524228) has been shown to be well conserved (back to chicken), to be expressed (by RT-PCR) and have some functional actvity in vitro (Dintilhac et al 2004, PMID: 15161102). Although the translation has not been shown in vivo, the protein is conserved in mouse
ENST00000283921.5	MANE_select
ENST00000006015.4	MANE_select
ENST00000649031.1	CAGE supported TSS
ENST00000649031.1	LR annotation
ENST00000649031.1	MANE_select
ENST00000421733.1	QC splicing correct
ENST00000656679.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000523608.2	QC splicing correct
ENST00000496902.7	MANE_select
ENST00000664129.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656126.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000412413.1	QC splicing correct
ENST00000265395.7	MANE_select
ENST00000665298.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418691.5	alternative 5' UTR
ENST00000422800.5	alternative 5' UTR
ENST00000457186.2	not organism-supported
ENST00000283928.10	MANE_select
ENST00000649905.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000671499.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000455963.6	Assembled from SLRseq reads (SRP049776)
ENST00000436758.2	Assembled from SLRseq reads (SRP049776)
ENST00000444500.3	Assembled from SLRseq reads (SRP049776)
ENST00000657365.1	Assembled from SLRseq reads (SRP049776)
ENST00000396299.6	alternative 5' UTR
ENST00000469531.1	not organism-supported
ENST00000424599.5	alternative 5' UTR
ENST00000357727.7	MANE_select
ENST00000498316.3	QC splicing correct
ENST00000539664.3	MANE_select
ENST00000670619.1	Assembled from SLRseq reads (SRP049776)
ENST00000265394.10	MANE_select
ENST00000396276.7	alternative 5' UTR
ENST00000455893.6	QC splicing correct
ENST00000409850.5	alternative 5' UTR
ENST00000447426.1	alternative 5' UTR
ENST00000488891.6	alternative 5' UTR
ENST00000449801.5	alternative 5' UTR
ENST00000455544.5	alternative 5' UTR
ENST00000437527.1	alternative 5' UTR
ENST00000606897.5	HEX6GYL01A9K7G
ENST00000423511.1	alternative 5' UTR
ENST00000439384.5	CAGE supported TSS
ENST00000461824.1	QC splicing correct
ENST00000222792.11	CAGE supported TSS
ENST00000222792.11	MANE_select
ENST00000409350.5	alternative 5' UTR
ENST00000412711.6	CAGE supported TSS
ENST00000493906.5	CAGE supported TSS
ENST00000410098.1	CAGE supported TSS
ENST00000447171.2	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000319694.3	MANE_select
ENST00000450427.1	alternative 5' UTR
ENST00000242059.10	MANE_select
ENST00000409497.5	alternative 5' UTR
ENST00000421434.5	alternative 5' UTR
ENST00000438497.5	alternative 5' UTR
ENST00000222803.10	MANE_select
ENST00000649443.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000449726.6	MANE_select
ENST00000449726.6	genebuild_only_MANE
ENST00000666446.1	Assembled from SLRseq reads (SRP049776)
ENST00000324453.13	MANE_select
ENST00000323037.5	MANE_select
ENST00000653239.1	Assembled from SLRseq reads (SRP049776)
ENST00000222823.9	MANE_select
ENST00000413433.5	alternative 5' UTR
ENST00000411552.5	alternative 5' UTR
ENST00000419799.5	alternative 5' UTR
ENST00000419601.1	alternative 5' UTR
ENST00000275428.9	MANE_select
ENST00000656284.1	Assembled from SLRseq reads (SRP049776)
ENST00000660767.1	Assembled from SLRseq reads (SRP049776)
ENST00000663031.1	Assembled from RACEseq reads
ENST00000667338.1	Assembled from SLRseq reads (SRP049776)
ENST00000581794.6	Assembled from SLRseq reads (SRP049776)
ENST00000581665.6	Assembled from SLRseq reads (SRP049776)
ENST00000663944.1	Assembled from SLRseq reads (SRP049776)
ENST00000663462.1	Assembled from SLRseq reads (SRP049776)
ENST00000667129.1	Assembled from SLRseq reads (SRP049776)
ENST00000584023.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000580440.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667137.1	Assembled from SLRseq reads (SRP049776)
ENST00000657049.1	Assembled from SLRseq reads (SRP049776)
ENST00000656943.1	Assembled from RACEseq reads
ENST00000675051.1	non canonical U12
ENST00000674807.1	non canonical U12
ENST00000675529.1	non canonical U12
ENST00000674643.1	non canonical U12
ENST00000470392.2	non canonical U12
ENST00000675810.1	non canonical U12
ENST00000676088.1	alternative 3' UTR
ENST00000676088.1	non canonical U12
ENST00000676210.1	non canonical U12
ENST00000485784.2	non canonical U12
ENST00000674815.1	non canonical U12
ENST00000676403.1	non canonical U12
ENST00000478124.6	non canonical U12
ENST00000676140.1	non canonical U12
ENST00000675859.1	alternative 3' UTR
ENST00000675859.1	non canonical U12
ENST00000389266.8	MANE_select
ENST00000389266.8	non canonical U12
ENST00000675693.1	non canonical U12
ENST00000676259.1	non canonical U12
ENST00000675651.1	non canonical U12
ENST00000674616.1	non canonical U12
ENST00000674737.1	non canonical U12
ENST00000674969.1	non canonical U12
ENST00000676164.1	non canonical U12
ENST00000675886.1	non canonical U12
ENST00000444666.6	non canonical U12
ENST00000674851.1	alternative 5' UTR
ENST00000674851.1	non canonical U12
ENST00000675863.1	non canonical U12
ENST00000471646.6	MANE_select
ENST00000013222.5	MANE_select
ENST00000265299.6	MANE_select
ENST00000652696.1	alternative 3' UTR
ENST00000311813.11	LR annotation
ENST00000311813.11	MANE_select
ENST00000652692.1	alternative 3' UTR
ENST00000326139.7	MANE_select
ENST00000304166.9	MANE_select
ENST00000431811.5	alternative 5' UTR
ENST00000658525.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000297142.4	MANE_select
ENST00000433356.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000409717.5	alternative 5' UTR
ENST00000456011.5	alternative 5' UTR
ENST00000407970.7	NP_919276.2
ENST00000454513.5	alternative 5' UTR
ENST00000342032.8	MANE_select
ENST00000396191.6	MANE_select
ENST00000396191.6	alternative 5' UTR
ENST00000396182.6	alternative 5' UTR
ENST00000396189.2	alternative 5' UTR
ENST00000450169.7	MANE_select
ENST00000409909.7	alternative 5' UTR
ENST00000409292.5	alternative 5' UTR
ENST00000410044.5	alternative 5' UTR
ENST00000409782.5	alternative 5' UTR
ENST00000409952.3	alternative 5' UTR
ENST00000318709.9	MANE_select
ENST00000497020.1	QC splicing correct
ENST00000650302.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000304056.9	MANE_select
ENST00000452926.1	alternative 5' UTR
ENST00000453627.1	alternative 5' UTR
ENST00000423022.1	alternative 5' UTR
ENST00000424468.1	alternative 5' UTR
ENST00000242209.9	MANE_select
ENST00000643244.1	CAGE supported TSS
ENST00000643244.1	LR annotation
ENST00000610140.7	CAGE supported TSS
ENST00000610140.7	LR annotation
ENST00000610140.7	MANE_select
ENST00000610140.7	upstream ATG
ENST00000449201.5	alternative 5' UTR
ENST00000297157.8	MANE_select
ENST00000672717.1	alternative 5' UTR
ENST00000432983.5	alternative 5' UTR
ENST00000350941.7	NP_055266.2
ENST00000396127.6	NP_001028776.1
ENST00000355070.6	NP_001028777.1
ENST00000242067.11	CAGE supported TSS
ENST00000242067.11	LR annotation
ENST00000242067.11	MANE_select
ENST00000668729.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656190.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663253.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669134.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440034.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436222.6	CAGE supported TSS
ENST00000436222.6	NMD likely if extended
ENST00000649409.2	CAGE supported TSS
ENST00000649409.2	LR annotation
ENST00000649409.2	MANE_select
ENST00000667035.1	Assembled from SLRseq reads (SRP049776)
ENST00000666233.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660587.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000360581.6	MANE_select
ENST00000638088.2	MANE_select
ENST00000428054.1	not organism-supported
ENST00000659178.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000408931.4	MANE_select
ENST00000408931.4	NP_001071121
ENST00000656715.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661178.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664446.1	Assembled from SLRseq reads (SRP049776)
ENST00000311350.8	MANE_select
ENST00000311350.8	alternative 5' UTR
ENST00000426180.1	not organism-supported
ENST00000438224.5	alternative 5' UTR
ENST00000603731.2	alternative 5' UTR
ENST00000654982.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656399.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430518.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659906.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653933.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652195.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652195.2	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000669772.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000585952.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659010.1	Assembled from SLRseq reads (SRP049776)
ENST00000654146.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670851.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668139.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000412856.6	Assembled from SLRseq reads (SRP049776)
ENST00000670426.1	Assembled from SLRseq reads (SRP049776)
ENST00000665516.1	Assembled from SLRseq reads (SRP049776)
ENST00000658573.1	Assembled from SLRseq reads (SRP049776)
ENST00000635669.1	non canonical conserved
ENST00000635047.1	non canonical conserved
ENST00000635175.1	non canonical conserved
ENST00000667088.1	Assembled from SLRseq reads (SRP049776)
ENST00000665884.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664385.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650410.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000654124.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647646.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000242108.9	MANE_select
ENST00000440378.6	MANE_select
ENST00000431396.1	alternative 5' UTR
ENST00000265748.7	MANE_select
ENST00000418118.1	alternative 5' UTR
ENST00000617537.5	MANE_select
ENST00000491444.5	QC splicing correct
ENST00000310758.9	MANE_select
ENST00000396045.7	alternative 5' UTR
ENST00000396040.6	alternative 5' UTR
ENST00000442504.5	alternative 5' UTR
ENST00000448602.5	alternative 5' UTR
ENST00000464262.6	QC splicing correct
ENST00000455879.5	alternative 5' UTR
ENST00000453399.5	alternative 5' UTR
ENST00000445322.1	alternative 5' UTR
ENST00000450180.5	alternative 5' UTR
ENST00000199448.9	MANE_select
ENST00000199448.9	upstream uORF
ENST00000199447.9	MANE_select
ENST00000444718.5	alternative 5' UTR
ENST00000440017.5	alternative 5' UTR
ENST00000436072.7	MANE_select
ENST00000009041.12	MANE_select
ENST00000396013.5	alternative 5' UTR
ENST00000440144.5	alternative 5' UTR
ENST00000453225.5	alternative 5' UTR
ENST00000429075.1	alternative 5' UTR
ENST00000436911.6	F
ENST00000436911.6	TRGC2*08
ENST00000390333.1	F
ENST00000390333.1	TRGJ2*01
ENST00000390334.1	F
ENST00000390334.1	TRGJP2*01
ENST00000443402.6	F
ENST00000443402.6	TRGC1*01
ENST00000390337.1	F
ENST00000390337.1	TRGJ1*02
ENST00000390338.2	F
ENST00000390338.2	TRGJP*01
ENST00000390339.1	F
ENST00000390339.1	TRGJP1*01
ENST00000390340.2	ORF
ENST00000390340.2	TRGV11*02
ENST00000453257.1	P
ENST00000453257.1	TRGVB*01
ENST00000390341.2	ORF
ENST00000390341.2	TRGV10*01
ENST00000444775.2	F
ENST00000444775.2	TRGV9*01
ENST00000413819.1	P
ENST00000413819.1	TRGVA is a very degenerated pseudogene and have been unable to add evidence
ENST00000413819.1	TRGVA*01
ENST00000390343.2	F
ENST00000390343.2	TRGV8*01
ENST00000427089.1	P
ENST00000427089.1	TRGV7*01
ENST00000417928.1	P
ENST00000417928.1	TRGV6*01
ENST00000669822.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668633.1	Assembled from SLRseq reads (SRP049776)
ENST00000661780.1	Assembled from SLRseq reads (SRP049776)
ENST00000419915.1	P
ENST00000419915.1	TRGV5P*02
ENST00000390344.2	F
ENST00000390344.2	TRGV5*01
ENST00000390345.2	F
ENST00000390345.2	TRGV4*02
ENST00000390346.2	F
ENST00000390346.2	TRGV3*02
ENST00000426402.2	F
ENST00000426402.2	TRGV2*01
ENST00000390348.2	ORF
ENST00000390348.2	TRGV1*01
ENST00000356264.7	MANE_select
ENST00000310301.9	MANE_select
ENST00000418457.6	QC splicing correct
ENST00000418457.6	alternative 5' UTR
ENST00000457055.1	cross species TrEMBL (CHICK)
ENST00000518318.7	MANE_select
ENST00000451021.5	CAGE supported TSS
ENST00000524147.5	alternative 5' UTR
ENST00000520104.5	alternative 5' UTR
ENST00000673818.5	alternative 5' UTR
ENST00000464276.2	NMD likely if extended
ENST00000420243.2	Assembled from SLRseq reads (SRP049776)
ENST00000663864.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653564.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439751.2	QC splicing correct
ENST00000223273.7	MANE_select
ENST00000663389.1	Assembled from SLRseq reads (SRP049776)
ENST00000005257.7	MANE_select
ENST00000436179.1	alternative 5' UTR
ENST00000654922.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656108.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666283.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666283.1	Assembled from SLRseq reads (SRP049776)
ENST00000665200.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656645.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656391.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668152.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658784.1	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000658784.1	Assembled from SLRseq reads (SRP049776)
ENST00000428627.1	Sw:Q96CS7.1
ENST00000181839.10	MANE_select
ENST00000646039.1	343764
ENST00000642660.1	NMD likely if extended
ENST00000306984.8	MANE_select
ENST00000444074.3	QC splicing correct
ENST00000401647.7	upstream ATG
ENST00000628514.3	upstream ATG
ENST00000335693.9	MANE_select
ENST00000335693.9	upstream ATG
ENST00000464028.1	QC splicing correct
ENST00000665804.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666072.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667448.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000242208.5	MANE_select
ENST00000442711.1	alternative 5' UTR
ENST00000662280.1	Assembled from SLRseq reads (SRP049776)
ENST00000420821.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667639.1	Assembled from SLRseq reads (SRP049776)
ENST00000662248.1	Assembled from SLRseq reads (SRP049776)
ENST00000670641.1	Assembled from SLRseq reads (SRP049776)
ENST00000678429.1	alternative 5' UTR
ENST00000395925.8	MANE_select
ENST00000677605.1	CAGE supported TSS
ENST00000479210.1	CAGE supported TSS
ENST00000642432.1	CAGE supported TSS
ENST00000643264.1	CAGE supported TSS
ENST00000647255.1	alternative 3' UTR
ENST00000647255.1	alternative 5' UTR
ENST00000455947.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438029.1	QC splicing correct
ENST00000438029.1	alternative 5' UTR
ENST00000425683.1	alternative 5' UTR
ENST00000432637.1	QC splicing correct
ENST00000432637.1	alternative 5' UTR
ENST00000223321.9	MANE_select
ENST00000223324.3	MANE_select
ENST00000588324.1	non canonical other
ENST00000653897.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657132.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000666102.1	Assembled from SLRseq reads (SRP049776)
ENST00000395891.7	MANE_select
ENST00000462448.1	not organism-supported
ENST00000648544.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000319357.6	MANE_select
ENST00000446330.6	Genoscope mRNA only
ENST00000490251.1	FLJ42014
ENST00000488813.1	FLJ26179
ENST00000395879.5	FLJ39884
ENST00000395879.5	alternative 5' UTR
ENST00000310564.10	FLJ11843
ENST00000415798.5	alternative 5' UTR
ENST00000265523.9	MANE_select
ENST00000402924.5	alternative 5' UTR
ENST00000424330.1	alternative 5' UTR
ENST00000317534.6	MANE_select
ENST00000336086.10	alternative 5' UTR
ENST00000453200.6	MANE_select
ENST00000426198.5	alternative 5' UTR
ENST00000455877.5	alternative 5' UTR
ENST00000222402.8	MANE_select
ENST00000258704.3	NP_778234
ENST00000648264.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648264.1	ID: align_id:3735734|asmbl_225899
ENST00000441840.7	Genoscope mRNA only
ENST00000448521.6	MANE_select
ENST00000297283.4	MANE_select
ENST00000242248.10	MANE_select
ENST00000492971.1	not organism-supported
ENST00000223357.8	MANE_select
ENST00000610533.6	MANE_select
ENST00000610533.6	align_id:3735772|asmbl_225937
ENST00000452185.5	alternative 5' UTR
ENST00000433715.5	alternative 5' UTR
ENST00000456038.5	alternative 5' UTR
ENST00000418438.1	alternative 5' UTR
ENST00000223364.7	MANE_select
ENST00000336642.9	CAGE supported TSS
ENST00000345378.7	LR annotation
ENST00000403799.8	MANE_select
ENST00000437084.1	not organism-supported
ENST00000473353.1	QC splicing correct
ENST00000476008.1	not organism-supported
ENST00000223369.3	MANE_select
ENST00000350811.7	alternative 3' UTR
ENST00000395749.7	MANE_select
ENST00000395749.7	NP_001211
ENST00000353185.7	Genoscope mRNA only
ENST00000427209.1	not organism-supported
ENST00000624861.1	confirm experimentally
ENST00000355451.8	MANE_select
ENST00000381160.8	MANE_select
ENST00000258772.10	MANE_select
ENST00000457408.7	MANE_select
ENST00000658337.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000419661.5	alternative 5' UTR
ENST00000222673.6	MANE_select
ENST00000309315.9	MANE_select
ENST00000457123.5	alternative 5' UTR
ENST00000676977.1	align_id:1367611|asmbl_87514
ENST00000677107.1	align_id:1367609|asmbl_87512
ENST00000468812.6	MANE_select
ENST00000620047.5	align_id:1367616|asmbl_87519
ENST00000678643.1	align_id:3736089|asmbl_226254
ENST00000677521.1	align_id:3736081|asmbl_226246
ENST00000678789.1	align_id:3736080|asmbl_226245
ENST00000677022.1	align_id:1367606|asmbl_87509
ENST00000678805.1	align_id:1367608|asmbl_87511
ENST00000308153.9	MANE_select
ENST00000443162.1	QC splicing correct
ENST00000395699.5	MANE_select
ENST00000258787.12	MANE_select
ENST00000648014.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000668580.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667823.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000582727.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000580528.2	Assembled from SLRseq reads (SRP049776)
ENST00000667119.1	Assembled from SLRseq reads (SRP049776)
ENST00000653305.1	Assembled from SLRseq reads (SRP049776)
ENST00000258781.11	MANE_select
ENST00000648329.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000490531.3	MANE_select
ENST00000258770.8	MANE_select
ENST00000395655.8	alternative 5' UTR
ENST00000494076.5	alternative 5' UTR
ENST00000475893.1	alternative 5' UTR
ENST00000482285.1	alternative 5' UTR
ENST00000495078.1	alternative 5' UTR
ENST00000242249.8	MANE_select
ENST00000481345.1	alternative 3' UTR
ENST00000666999.1	Assembled from SLRseq reads (SRP049776)
ENST00000432715.5	NP_001268697.1
ENST00000297323.12	MANE_select
ENST00000609439.2	not best-in-genome evidence
ENST00000457280.5	Genoscope mRNA only
ENST00000275525.8	MANE_select
ENST00000468955.1	Genoscope mRNA only
ENST00000381083.9	MANE_select
ENST00000381083.9	NP_001013416
ENST00000428530.5	alternative 3' UTR
ENST00000417621.5	alternative 3' UTR
ENST00000664963.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658576.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667638.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656460.1	Assembled from SLRseq reads (SRP049776)
ENST00000311160.14	MANE_select
ENST00000415929.5	alternative 5' UTR
ENST00000413551.1	alternative 5' UTR
ENST00000668284.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671379.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664691.1	Assembled from SLRseq reads (SRP049776)
ENST00000289672.7	MANE_select
ENST00000258774.10	MANE_select
ENST00000432325.5	alternative 5' UTR
ENST00000432627.5	QC splicing correct
ENST00000432627.5	alternative 5' UTR
ENST00000433977.5	QC splicing correct
ENST00000297325.9	MANE_select
ENST00000395572.6	alternative 5' UTR
ENST00000449896.2	QC splicing correct
ENST00000348904.4	MANE_select
ENST00000416681.5	alternative 5' UTR
ENST00000432131.5	alternative 5' UTR
ENST00000436673.5	alternative 5' UTR
ENST00000395564.9	MANE_select
ENST00000395564.9	alternative 5' UTR
ENST00000435803.6	MANE_select
ENST00000456513.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649656.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000664348.1	Assembled from SLRseq reads (SRP049776)
ENST00000624154.1	confirm experimentally
ENST00000340652.5	MANE_select
ENST00000046087.7	MANE_select
ENST00000663206.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000297001.7	MANE_select
ENST00000642219.1	alternative 5' UTR
ENST00000645066.1	alternative 5' UTR
ENST00000331340.8	CAGE supported TSS
ENST00000331340.8	LR annotation
ENST00000331340.8	MANE_select
ENST00000439701.2	alternative 5' UTR
ENST00000356889.8	alternative 5' UTR
ENST00000433017.5	alternative 5' UTR
ENST00000419119.1	alternative 5' UTR
ENST00000436590.5	alternative 5' UTR
ENST00000422854.5	alternative 5' UTR
ENST00000440350.5	alternative 5' UTR
ENST00000420829.5	alternative 5' UTR
ENST00000448788.1	alternative 5' UTR
ENST00000444124.7	MANE_select
ENST00000444124.7	alternative 5' UTR
ENST00000430300.5	Genoscope mRNA only
ENST00000420203.1	alternative 5' UTR
ENST00000335866.7	alternative 5' UTR
ENST00000402578.5	alternative 5' UTR
ENST00000401949.6	MANE_select
ENST00000403097.6	alternative 5' UTR
ENST00000406641.5	alternative 5' UTR
ENST00000643299.1	alternative 5' UTR
ENST00000407526.6	alternative 5' UTR
ENST00000645075.2	upstream ATG
ENST00000439044.7	alternative 5' UTR
ENST00000439044.7	upstream ATG
ENST00000467386.5	QC splicing correct
ENST00000664024.1	Assembled from SLRseq reads (SRP049776)
ENST00000265136.12	MANE_select
ENST00000648294.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648455.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000671117.1	Assembled from SLRseq reads (SRP049776)
ENST00000666718.1	Assembled from SLRseq reads (SRP049776)
ENST00000659624.1	Assembled from SLRseq reads (SRP049776)
ENST00000408890.6	MANE_select
ENST00000653190.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670902.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663138.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660945.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662931.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661502.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670945.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666213.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663312.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660413.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665927.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659794.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659250.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662259.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659481.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670507.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669638.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668489.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656718.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663872.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654050.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656885.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660958.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658338.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000418679.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668442.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657889.1	Assembled from SLRseq reads (SRP049776)
ENST00000669718.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654826.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426205.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666100.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660245.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666668.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669187.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669611.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661025.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659445.1	Assembled from SLRseq reads (SRP049776)
ENST00000654951.1	Assembled from SLRseq reads (SRP049776)
ENST00000668540.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000407838.7	NP_872352
ENST00000402613.4	MANE_select
ENST00000665447.1	Assembled from SLRseq reads (SRP049776)
ENST00000395535.7	alternative 5' UTR
ENST00000352861.9	MANE_select
ENST00000352861.9	genebuild_only_MANE
ENST00000450622.1	alternative 5' UTR
ENST00000655633.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439413.2	QC splicing correct
ENST00000275493.7	MANE_select
ENST00000342916.7	NP_958439.1
ENST00000344576.6	NP_958441.1
ENST00000420316.6	NP_958440.1
ENST00000254770.3	MANE_select
ENST00000285279.10	MANE_select
ENST00000428648.5	alternative 5' UTR
ENST00000428097.5	alternative 5' UTR
ENST00000453256.5	alternative 5' UTR
ENST00000455023.5	alternative 5' UTR
ENST00000414113.5	alternative 5' UTR
ENST00000417399.5	alternative 5' UTR
ENST00000452832.5	alternative 5' UTR
ENST00000455909.5	novel transcript
ENST00000388975.4	FLJ44060
ENST00000388975.4	MANE_select
ENST00000429591.4	MANE_select
ENST00000411863.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000446692.5	alternative 5' UTR
ENST00000322090.8	MANE_select
ENST00000437587.5	QC splicing correct
ENST00000285298.9	MANE_select
ENST00000443449.1	alternative 5' UTR
ENST00000437355.6	QC splicing correct
ENST00000275605.8	MANE_select
ENST00000395471.7	alternative 5' UTR
ENST00000421626.5	alternative 5' UTR
ENST00000419984.6	alternative 5' UTR
ENST00000421312.5	alternative 5' UTR
ENST00000424596.1	alternative 5' UTR
ENST00000413218.5	alternative 5' UTR
ENST00000416592.1	alternative 5' UTR
ENST00000335503.3	NP_001009186.1
ENST00000275603.9	MANE_select
ENST00000395436.7	NP_001035934.1
ENST00000395436.7	upstream ATG
ENST00000395435.7	NP_001035935.1
ENST00000395435.7	upstream ATG
ENST00000413952.7	NP_001035933.1
ENST00000342190.11	upstream ATG
ENST00000434526.8	MANE_select
ENST00000434526.8	upstream ATG
ENST00000297373.7	MANE_select
ENST00000446428.5	QC splicing correct
ENST00000395422.4	MANE_select
ENST00000329309.4	MANE_select
ENST00000647804.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000651867.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651867.2	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000666625.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665097.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665238.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657009.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436042.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658294.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657918.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657367.1	Assembled from SLRseq reads (SRP049776)
ENST00000669438.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658523.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666818.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670991.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671494.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000624628.1	not best-in-genome evidence
ENST00000664683.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671083.1	Assembled from RACEseq reads
ENST00000670596.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420713.2	MANE_select
ENST00000666203.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665107.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000424036.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000596569.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000433918.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000587736.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656045.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669791.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655394.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656723.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656125.1	Assembled from SLRseq reads (SRP049776)
ENST00000656711.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660806.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669412.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659774.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652932.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647881.1	ID: align_id:1368002|asmbl_87905
ENST00000657780.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000647787.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000647787.1	ID: align_id:3736731|asmbl_226896
ENST00000647787.1	SLR-seq_HsBN_lib7 : HsBN_lib7:Read_165895-Barcode=BC223:length=1890 ;
ENST00000456806.3	MANE_select
ENST00000456806.3	not best-in-genome evidence
ENST00000429565.4	not best-in-genome evidence
ENST00000421025.3	MANE_select
ENST00000657968.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438373.5	alternative 5' UTR
ENST00000423484.3	MANE_select
ENST00000653713.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000309683.11	MANE_select
ENST00000662124.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665645.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000360117.7	alternative 5' UTR
ENST00000344930.7	alternative 5' UTR
ENST00000307355.12	MANE_select
ENST00000658253.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661399.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663172.1	Assembled from SLRseq reads (SRP049776)
ENST00000666422.1	Assembled from SLRseq reads (SRP049776)
ENST00000653683.1	Assembled from SLRseq reads (SRP049776)
ENST00000282869.11	NP_056936.2
ENST00000394323.3	MANE_select
ENST00000632111.1	CAGE supported TSS
ENST00000328747.12	MANE_select
ENST00000360768.5	MANE_select
ENST00000648187.1	CAGE supported TSS
ENST00000304895.9	MANE_select
ENST00000304874.14	LR annotation
ENST00000304874.14	MANE_select
ENST00000673518.1	NP_001020117.1
ENST00000395332.8	alternative 5' UTR
ENST00000395331.4	NP_001020115.1
ENST00000671817.1	alternative 5' UTR
ENST00000398684.6	NP_001035738.1
ENST00000395326.8	MANE_select
ENST00000338592.5	NP_001035737.1
ENST00000442120.1	alternative 5' UTR
ENST00000304842.6	MANE_select
ENST00000451388.1	alternative 5' UTR
ENST00000654214.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669732.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654121.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666724.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669130.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000649635.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000639828.2	MANE_select
ENST00000656515.1	Assembled from SLRseq reads (SRP049776)
ENST00000657342.1	Assembled from SLRseq reads (SRP049776)
ENST00000662347.1	Assembled from SLRseq reads (SRP049776)
ENST00000442563.5	alternative 5' UTR
ENST00000450873.6	alternative 5' UTR
ENST00000284957.9	MANE_select
ENST00000607978.1	CAGE supported TSS
ENST00000650401.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000341567.8	FLJ10099
ENST00000341567.8	MANE_select
ENST00000607045.5	alternative 5' UTR
ENST00000413593.5	alternative 5' UTR
ENST00000424964.6	alternative 5' UTR
ENST00000418375.1	alternative 5' UTR
ENST00000246868.7	MANE_select
ENST00000359626.10	MANE_select
ENST00000647855.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000659217.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432182.1	also supported by human protein P00395
ENST00000446187.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667549.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669425.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000447158.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661243.1	Assembled from SLRseq reads (SRP049776)
ENST00000670444.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426356.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662641.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669908.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000644939.1	NAGNAG splice site
ENST00000342771.10	MANE_select
ENST00000643587.1	CAGE supported TSS
ENST00000664521.1	CAGE supported TSS
ENST00000644506.1	CAGE supported TSS
ENST00000644506.1	NAGNAG splice site
ENST00000644359.1	CAGE supported TSS
ENST00000644359.1	NAGNAG splice site
ENST00000416482.1	NAGNAG splice site
ENST00000656200.1	CAGE supported TSS
ENST00000333538.10	MANE_select
ENST00000395275.7	MANE_select
ENST00000395275.7	NP_113656
ENST00000395276.6	alternative 5' UTR
ENST00000431984.5	alternative 5' UTR
ENST00000446128.1	alternative 5' UTR
ENST00000620995.5	MANE_select
ENST00000648049.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000285805.3	MANE_select
ENST00000453092.3	This is an almost identical copy of transcribed pseudogene GTF2IP1
ENST00000438747.7	MANE_select
ENST00000333149.7	MANE_select
ENST00000453152.1	alternative 5' UTR
ENST00000252037.5	MANE_select
ENST00000648538.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000344575.5	MANE_select
ENST00000339594.9	MANE_select
ENST00000404251.1	alternative 3' UTR
ENST00000223368.7	MANE_select
ENST00000455335.2	overlapping uORF
ENST00000416906.2	QC splicing correct
ENST00000305632.11	MANE_select
ENST00000417008.5	Genoscope mRNA only
ENST00000354613.5	This variant represents swissprot isoform Q9NP71-4
ENST00000313375.8	MANE_select
ENST00000324941.5	MANE_select
ENST00000451519.1	QC splicing correct
ENST00000395176.3	MANE_select
ENST00000421304.5	overlapping uORF
ENST00000265758.7	MANE_select
ENST00000222812.8	MANE_select
ENST00000427153.2	QC splicing correct
ENST00000437891.5	QC splicing correct
ENST00000395145.3	MANE_select
ENST00000435050.1	alternative 5' UTR
ENST00000340958.4	CAGE supported TSS
ENST00000340958.4	MANE_select
ENST00000297873.9	MANE_select
ENST00000320531.3	MANE_select
ENST00000252034.12	MANE_select
ENST00000416107.5	QC splicing correct
ENST00000320399.10	QC splicing correct
ENST00000336180.7	MANE_select
ENST00000538333.3	NP_001191355.1
ENST00000265753.13	MANE_select
ENST00000678341.1	CAGE supported TSS
ENST00000465116.5	alternative 5' UTR
ENST00000475494.5	alternative 5' UTR
ENST00000361082.7	alternative 5' UTR
ENST00000275635.11	alternative 5' UTR
ENST00000460943.6	MANE_select
ENST00000460943.6	alternative 5' UTR
ENST00000055077.8	CCDS5568.1
ENST00000055077.8	MANE_select
ENST00000493156.6	Genoscope mRNA only
ENST00000473493.2	NMD likely if extended
ENST00000661689.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000223398.11	MANE_select
ENST00000424337.7	MANE_select
ENST00000489094.1	not organism-supported
ENST00000623770.1	confirm experimentally
ENST00000573035.6	MANE_select
ENST00000432143.2	alternative 5' UTR
ENST00000669011.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000450426.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000574228.1	not organism-supported
ENST00000289473.10	MANE_select
ENST00000616305.2	MANE_select
ENST00000610322.5	MANE_select
ENST00000472837.7	MANE_select
ENST00000614021.1	NP_002625
ENST00000652175.1	not best-in-genome evidence
ENST00000458474.2	not best-in-genome evidence
ENST00000650609.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000650609.1	ID: align_id:1368370|asmbl_88273
ENST00000650609.1	pacbio_capture_seq_hsBrain : m150414_074750_42137_c100793412550000001823172010081552_s1_p0_115841_ccs ;
ENST00000615331.5	MANE_select
ENST00000439629.2	QC splicing correct
ENST00000398379.2	alternative 5' UTR
ENST00000336926.11	MANE_select
ENST00000336926.11	non-canonical splice sites between exons 2 and 3. (AT/AC)
ENST00000434438.6	non-canonical splice sites between exons 2 and 3. (AT/AC)
ENST00000420909.1	non-canonical splice sites between exons 2 and 3. (AT/AC)
ENST00000394905.2	alternative 5' UTR
ENST00000005180.9	MANE_select
ENST00000222902.7	MANE_select
ENST00000416943.1	alternative 5' UTR
ENST00000006777.11	MANE_select
ENST00000006777.11	NP_001035546
ENST00000476218.1	QC splicing correct
ENST00000428119.1	NP_001035547
ENST00000453773.5	alternative 5' UTR
ENST00000439963.5	alternative 5' UTR
ENST00000461988.6	MANE_select
ENST00000421059.1	alternative 5' UTR
ENST00000412521.5	alternative 5' UTR
ENST00000414186.5	alternative 5' UTR
ENST00000432753.5	alternative 5' UTR
ENST00000449920.5	alternative 5' UTR
ENST00000418341.1	alternative 5' UTR
ENST00000493111.7	MANE_select
ENST00000431867.5	NMD likely if extended
ENST00000431867.5	QC splicing correct
ENST00000359697.8	MANE_select
ENST00000431581.5	alternative 5' UTR
ENST00000451157.1	QC splicing correct
ENST00000315758.10	MANE_select
ENST00000611745.2	MANE_select
ENST00000676398.1	Ensembl_RNAseq_introns_lung
ENST00000676398.1	intropolis_filtered
ENST00000675488.1	Snaptron_GTEX
ENST00000675624.1	Snaptron_GTEX
ENST00000675624.1	intropolis_filtered
ENST00000674560.1	Snaptron_GTEX
ENST00000674560.1	intropolis_filtered
ENST00000675733.1	intropolis_filtered
ENST00000248553.7	MANE_select
ENST00000674965.1	Ensembl_RNAseq_introns_thyroid_lymph
ENST00000674638.1	Ensembl_RNAseq_introns_ovary_lymph
ENST00000674547.1	Ensembl_RNAseq_introns_colon
ENST00000675226.1	Snaptron_GTEX
ENST00000675538.1	Snaptron_GTEX
ENST00000675538.1	intropolis_filtered
ENST00000676231.1	Snaptron_GTEX
ENST00000676231.1	intropolis_filtered
ENST00000675134.1	Snaptron_GTEX
ENST00000675134.1	intropolis_filtered
ENST00000675906.1	Snaptron_GTEX
ENST00000675906.1	intropolis_filtered
ENST00000674650.1	Ensembl_RNAseq_introns: thyroid; ovary; lung; colon; breast; adrenal
ENST00000674650.1	Snaptron_GTEX
ENST00000675417.1	PacBio_RACEseq_UKGTN_Heart_reads
ENST00000676195.1	Snaptron_GTEX
ENST00000429938.1	CAGE supported TSS
ENST00000307630.5	MANE_select
ENST00000275560.4	MANE_select
ENST00000336517.8	NP_009086
ENST00000394857.8	MANE_select
ENST00000425780.5	alternative 5' UTR
ENST00000456590.5	alternative 5' UTR
ENST00000451769.5	alternative 5' UTR
ENST00000457529.5	alternative 5' UTR
ENST00000413936.6	NP_001096065
ENST00000423646.5	alternative 5' UTR
ENST00000438930.5	alternative 5' UTR
ENST00000430490.6	NP_001096064
ENST00000442516.1	alternative 5' UTR
ENST00000429179.1	alternative 5' UTR
ENST00000435861.1	alternative 5' UTR
ENST00000446820.6	NP_001096066
ENST00000334348.8	MANE_select
ENST00000334348.8	NP_872625
ENST00000515340.2	not best-in-genome evidence
ENST00000275569.8	NP_694537
ENST00000275569.8	isoform 2
ENST00000310842.8	NP_036362
ENST00000310842.8	isoform 1
ENST00000648393.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000472463.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000472463.2	not best-in-genome evidence
ENST00000664386.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000434531.1	QC splicing correct
ENST00000434531.1	not best-in-genome evidence
ENST00000671986.2	not best-in-genome evidence
ENST00000415750.5	alternative 5' UTR
ENST00000285871.5	MANE_select
ENST00000248598.6	MANE_select
ENST00000257626.12	MANE_select
ENST00000257626.12	NP_059135
ENST00000608884.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608884.2	CAGE supported TSS
ENST00000670154.1	Assembled from SLRseq reads (SRP049776)
ENST00000248594.11	MANE_select
ENST00000659053.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665948.1	Assembled from SLRseq reads (SRP049776)
ENST00000430801.6	Assembled from SLRseq reads (SRP049776)
ENST00000663454.1	Assembled from SLRseq reads (SRP049776)
ENST00000664660.1	Assembled from SLRseq reads (SRP049776)
ENST00000654794.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654794.1	Assembled from SLRseq reads (SRP049776)
ENST00000663654.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663654.1	Assembled from SLRseq reads (SRP049776)
ENST00000398043.3	Assembled from SLRseq reads (SRP049776)
ENST00000334955.13	MANE_select
ENST00000334955.13	NP_940869
ENST00000257663.4	MANE_select
ENST00000354212.9	MANE_select
ENST00000629359.2	CAGE supported TSS
ENST00000519748.5	CAGE supported TSS
ENST00000636993.1	CAGE supported TSS
ENST00000627965.1	confirm experimentally
ENST00000627671.1	confirm experimentally
ENST00000648775.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000654246.1	Assembled from SLRseq reads (SRP049776)
ENST00000429408.6	Assembled from SLRseq reads (SRP049776)
ENST00000663669.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661940.1	Assembled from SLRseq reads (SRP049776)
ENST00000616192.5	Assembled from SLRseq reads (SRP049776)
ENST00000657546.1	Assembled from SLRseq reads (SRP049776)
ENST00000655337.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668746.1	Assembled from SLRseq reads (SRP049776)
ENST00000655795.1	Assembled from SLRseq reads (SRP049776)
ENST00000669576.1	Assembled from SLRseq reads (SRP049776)
ENST00000435749.6	Assembled from SLRseq reads (SRP049776)
ENST00000414797.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667893.1	Assembled from SLRseq reads (SRP049776)
ENST00000451809.6	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000667729.1	Assembled from SLRseq reads (SRP049776)
ENST00000611793.2	Assembled from SLRseq reads (SRP049776)
ENST00000654732.1	Assembled from SLRseq reads (SRP049776)
ENST00000612203.5	Assembled from SLRseq reads (SRP049776)
ENST00000660878.1	Assembled from SLRseq reads (SRP049776)
ENST00000448195.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663422.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000667887.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000422093.6	Assembled from SLRseq reads (SRP049776)
ENST00000664666.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653779.1	Assembled from SLRseq reads (SRP049776)
ENST00000617955.5	Assembled from SLRseq reads (SRP049776)
ENST00000666657.1	Assembled from SLRseq reads (SRP049776)
ENST00000614953.5	Assembled from SLRseq reads (SRP049776)
ENST00000667881.1	Assembled from SLRseq reads (SRP049776)
ENST00000618186.5	Assembled from SLRseq reads (SRP049776)
ENST00000668474.1	Assembled from SLRseq reads (SRP049776)
ENST00000667103.1	Assembled from SLRseq reads (SRP049776)
ENST00000662153.1	Assembled from SLRseq reads (SRP049776)
ENST00000649225.1	alternative 5' UTR
ENST00000648663.1	alternative 5' UTR
ENST00000648663.1	upstream ATG
ENST00000649855.1	alternative 5' UTR
ENST00000648098.1	alternative 5' UTR
ENST00000648098.1	upstream ATG
ENST00000648476.1	alternative 5' UTR
ENST00000648476.1	upstream ATG
ENST00000648412.1	alternative 5' UTR
ENST00000648953.1	alternative 5' UTR
ENST00000648306.1	alternative 5' UTR
ENST00000648832.1	alternative 5' UTR
ENST00000648832.1	upstream ATG
ENST00000648877.1	alternative 5' UTR
ENST00000648877.1	upstream ATG
ENST00000442586.2	alternative 5' UTR
ENST00000442586.2	upstream ATG
ENST00000649487.1	alternative 5' UTR
ENST00000649487.1	upstream ATG
ENST00000649267.1	alternative 5' UTR
ENST00000351004.8	alternative 5' UTR
ENST00000649796.2	MANE_select
ENST00000648416.1	CAGE supported TSS
ENST00000648416.1	pacbio_capture_seq_hsHeart : m150411_044809_42137_c100785822550000001823156308111532_s1_p0_87934_ccs ;
ENST00000309881.11	NP_000063
ENST00000309881.11	alternative 5' UTR
ENST00000526804.5	QC splicing correct
ENST00000438020.5	alternative 5' UTR
ENST00000436384.5	alternative 5' UTR
ENST00000428497.5	alternative 5' UTR
ENST00000447544.7	NP_001001548
ENST00000447544.7	alternative 5' UTR
ENST00000482059.6	alternative 5' UTR
ENST00000394788.7	NP_000063
ENST00000394788.7	alternative 5' UTR
ENST00000426978.5	alternative 5' UTR
ENST00000413265.5	alternative 5' UTR
ENST00000419819.2	alternative 5' UTR
ENST00000398291.4	MANE_select
ENST00000265361.8	MANE_select
ENST00000419255.6	alternative 5' UTR
ENST00000623934.1	confirm experimentally
ENST00000456151.1	not organism-supported
ENST00000648981.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000222390.11	CAGE supported TSS
ENST00000222390.11	LR annotation
ENST00000222390.11	MANE_select
ENST00000457544.7	NP_001010932
ENST00000444829.7	NP_001010931
ENST00000453411.6	NP_001010933
ENST00000423064.7	NP_001010934
ENST00000412881.5	alternative 5' UTR
ENST00000421558.1	alternative 5' UTR
ENST00000356860.8	MANE_select
ENST00000333891.14	MANE_select
ENST00000333891.14	NP_055325.2
ENST00000643230.2	CAGE supported TSS
ENST00000643230.2	LR annotation
ENST00000643230.2	MANE_select
ENST00000265362.9	MANE_select
ENST00000436949.5	alternative 5' UTR
ENST00000420047.1	alternative 5' UTR
ENST00000448879.5	alternative 5' UTR
ENST00000424555.5	alternative 5' UTR
ENST00000439105.1	QC splicing correct
ENST00000439105.1	not best-in-genome evidence
ENST00000421579.1	alternative 5' UTR
ENST00000441140.1	alternative 5' UTR
ENST00000418031.2	Assembled from SLRseq reads (SRP049776)
ENST00000450689.7	MANE_select
ENST00000444627.5	QC splicing correct
ENST00000480216.1	First exon found by using Dotter
ENST00000474609.1	First exon found using Dotter
ENST00000398276.6	alternative 5' UTR
ENST00000425689.1	alternative 5' UTR
ENST00000670440.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000413276.6	QC splicing correct
ENST00000579677.5	alternative 5' UTR
ENST00000446796.6	alternative 5' UTR
ENST00000420131.5	alternative 5' UTR
ENST00000414630.6	alternative 5' UTR
ENST00000453049.5	alternative 5' UTR
ENST00000428819.5	alternative 5' UTR
ENST00000448598.5	alternative 5' UTR
ENST00000449088.7	alternative 5' UTR
ENST00000430405.7	alternative 5' UTR
ENST00000331242.12	MANE_select
ENST00000584619.5	alternative 3' UTR
ENST00000432366.6	alternative 5' UTR
ENST00000423590.6	alternative 5' UTR
ENST00000394703.9	alternative 5' UTR
ENST00000394703.9	non canonical TEC
ENST00000584457.5	non canonical TEC
ENST00000579592.5	alternative 5' UTR
ENST00000579592.5	non canonical TEC
ENST00000434534.5	alternative 5' UTR
ENST00000582925.5	alternative 5' UTR
ENST00000425705.2	alternative 5' UTR
ENST00000257637.8	MANE_select
ENST00000433078.5	alternative 5' UTR
ENST00000455575.1	alternative 5' UTR
ENST00000661943.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661943.1	Assembled from SLRseq reads (SRP049776)
ENST00000416560.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000421293.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000359941.10	Assembled from SLRseq reads (SRP049776)
ENST00000653182.1	Assembled from SLRseq reads (SRP049776)
ENST00000432193.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654969.1	Assembled from SLRseq reads (SRP049776)
ENST00000331536.8	MANE_select
ENST00000442291.1	not organism-supported
ENST00000649586.2	MANE_select
ENST00000649586.2	NP_000434.1
ENST00000265723.8	NP_061337.1
ENST00000359206.8	alternative 5' UTR
ENST00000417608.1	alternative 5' UTR
ENST00000622132.5	CAGE supported TSS
ENST00000622132.5	LR annotation
ENST00000622132.5	MANE_select
ENST00000265724.8	alternative 5' UTR
ENST00000416177.1	alternative 5' UTR
ENST00000341119.10	MANE_select
ENST00000341119.10	NP_061331
ENST00000265728.6	MANE_select
ENST00000398204.8	NP_057435
ENST00000265727.11	NP_068369
ENST00000265729.7	MANE_select
ENST00000447758.1	not organism-supported
ENST00000380079.9	MANE_select
ENST00000663862.1	Assembled from SLRseq reads (SRP049776)
ENST00000444032.1	We found the first 3 exons using BLAT and Dotter
ENST00000429649.1	5' end found by Dotter
ENST00000333190.5	MANE_select
ENST00000297203.3	MANE_select
ENST00000655452.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661644.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655037.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654764.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654952.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663934.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448260.2	We found three exons using BLAT and Dotter;  Base calling poor at the last exon
ENST00000667286.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663935.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668615.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665308.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000471553.1	non canonical TEC
ENST00000297205.7	MANE_select
ENST00000428074.5	alternative 5' UTR
ENST00000394621.7	MANE_select
ENST00000394621.7	genebuild_only_MANE
ENST00000394626.5	alternative 5' UTR
ENST00000394622.6	alternative 5' UTR
ENST00000389297.8	MANE_select
ENST00000451029.5	FLJ21062
ENST00000457170.6	GENCODE experimental pipeline
ENST00000420245.1	SK name: TCAG_1959470
ENST00000445784.1	SK name: DKFZp434N065
ENST00000469675.1	SK name: DKFZp434N144
ENST00000417207.5	QC splicing correct
ENST00000222511.11	MANE_select
ENST00000416322.5	alternative 5' UTR
ENST00000496677.6	MANE_select
ENST00000496677.6	alternative 5' UTR
ENST00000380050.8	MANE_select
ENST00000509356.2	MANE_select
ENST00000441971.5	SK name: THC1219317
ENST00000660974.1	Assembled from SLRseq reads (SRP049776)
ENST00000664362.1	Assembled from SLRseq reads (SRP049776)
ENST00000287934.4	MANE_select
ENST00000664526.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667625.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667885.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667320.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660007.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000351870.8	MANE_select
ENST00000406735.6	alternative 5' UTR
ENST00000456229.1	alternative 5' UTR
ENST00000442961.1	alternative 5' UTR
ENST00000425936.1	alternative 5' UTR
ENST00000668948.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000680534.1	align_id:1368819|asmbl_88722
ENST00000680513.1	align_id:1368818|asmbl_88721
ENST00000680072.1	align_id:1368820|asmbl_88723
ENST00000679554.1	align_id:1368824|asmbl_88727
ENST00000679821.1	align_id:3739163|asmbl_229328
ENST00000680181.1	align_id:3739168|asmbl_229333
ENST00000356239.8	CAGE supported TSS
ENST00000356239.8	MANE_select
ENST00000679521.1	align_id:1368821|asmbl_88724
ENST00000679521.1	align_id:3739244|asmbl_229409
ENST00000680074.1	align_id:3739274|asmbl_229439
ENST00000679722.1	NMD likely if extended
ENST00000679722.1	align_id:3739258|asmbl_229423
ENST00000679457.1	align_id:3739222|asmbl_229387
ENST00000679474.1	align_id:3739214|asmbl_229379
ENST00000680952.1	align_id:3739220|asmbl_229385
ENST00000680047.1	align_id:3739213|asmbl_229378
ENST00000681412.1	align_id:3739212|asmbl_229377
ENST00000679448.1	align_id:3739174|asmbl_229339
ENST00000680766.1	align_id:3739161|asmbl_229326
ENST00000674381.2	align_id:1368823|asmbl_88726
ENST00000674381.2	align_id:3739288|asmbl_229453
ENST00000359028.7	align_id:3739164|asmbl_229329
ENST00000491695.2	CAGE supported TSS
ENST00000491695.2	align_id:3739169|asmbl_229334
ENST00000394534.7	align_id:3739219|asmbl_229384
ENST00000681216.1	align_id:3739179|asmbl_229344
ENST00000680365.1	align_id:3739208|asmbl_229373
ENST00000487692.2	align_id:3739278|asmbl_229443
ENST00000486313.2	align_id:1368838|asmbl_88741
ENST00000003100.13	MANE_select
ENST00000003100.13	NP_000777
ENST00000422722.1	probably NMD of this locus but does not contain start codon of main variant
ENST00000650585.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000650585.1	ID: align_id:3739156|asmbl_229321
ENST00000650585.1	SLR-seq_HsBN_lib8 : HsBN_lib8:Read_396186-Barcode=BC350:length=892, HsBN_lib8:Read_150004-Barcode=BC384:length=1579, HsBN_lib8:Read_283913-Barcode=BC040:length=1884, HsBN_lib8:Read_215917-Barcode=BC336:length=2705, HsBN_lib8:Read_173269-Barcode=BC287:length=1674, HsBN_lib8:Read_67625-Barcode=BC320:length=1566, HsBN_lib8:Read_500645-Barcode=BC057:length=837, HsBN_lib8:Read_328811-Barcode=BC010:length=1328, HsBN_lib8:Read_76578-Barcode=BC204:length=1658, HsBN_lib8:Read_273357-Barcode=BC191:length=1789, HsBN_lib8:Read_38346-Barcode=BC189:length=2708, HsBN_lib8:Read_21081-Barcode=BC205:length=2073,
ENST00000653494.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000458448.6	MANE_select
ENST00000437357.1	alternative 5' UTR
ENST00000458177.6	LR annotation
ENST00000458177.6	alternative 5' UTR
ENST00000394505.7	CAGE supported TSS
ENST00000394505.7	MANE_select
ENST00000394505.7	alternative 5' UTR
ENST00000412043.6	alternative 5' UTR
ENST00000394503.6	NP_001013424
ENST00000433016.5	alternative 5' UTR
ENST00000454017.5	alternative 5' UTR
ENST00000440209.5	alternative 5' UTR
ENST00000430102.5	alternative 5' UTR
ENST00000413688.5	alternative 5' UTR
ENST00000458493.5	alternative 5' UTR
ENST00000452773.5	alternative 5' UTR
ENST00000444960.5	alternative 5' UTR
ENST00000425073.1	alternative 5' UTR
ENST00000265742.8	MANE_select
ENST00000442183.1	alternative 5' UTR
ENST00000287957.5	MANE_select
ENST00000658444.1	Assembled from SLRseq reads (SRP049776)
ENST00000662010.1	Assembled from SLRseq reads (SRP049776)
ENST00000603053.2	MANE_select
ENST00000603053.2	alternative 5' UTR
ENST00000248633.9	MANE_select
ENST00000265732.10	MANE_select
ENST00000445716.6	MANE_select
ENST00000438306.5	alternative 5' UTR
ENST00000415397.6	Genoscope mRNA only
ENST00000456502.1	alternative 5' UTR
ENST00000424848.3	MANE_select
ENST00000424848.3	alternative 5' UTR
ENST00000661747.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668236.1	Assembled from SLRseq reads (SRP049776)
ENST00000653602.1	Assembled from SLRseq reads (SRP049776)
ENST00000379958.3	CAGE supported TSS
ENST00000379958.3	LR annotation
ENST00000379958.3	MANE_select
ENST00000446617.1	alternative 5' UTR
ENST00000318238.9	CAGE supported TSS
ENST00000318238.9	LR annotation
ENST00000318238.9	MANE_select
ENST00000411955.5	alternative 5' UTR
ENST00000437805.5	alternative 5' UTR
ENST00000446959.5	alternative 5' UTR
ENST00000439952.5	alternative 5' UTR
ENST00000414791.5	alternative 5' UTR
ENST00000446033.1	alternative 5' UTR
ENST00000394468.7	MANE_select
ENST00000305866.10	MANE_select
ENST00000649152.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000426151.7	CAGE supported TSS
ENST00000426151.7	LR annotation
ENST00000426151.7	MANE_select
ENST00000426151.7	alternative 5' UTR
ENST00000649521.1	CAGE supported TSS
ENST00000649521.1	LR annotation
ENST00000649521.1	upstream ATG
ENST00000248572.10	MANE_select
ENST00000429473.1	alternative 5' UTR
ENST00000428834.1	alternative 5' UTR
ENST00000222543.11	CAGE supported TSS
ENST00000222543.11	LR annotation
ENST00000222543.11	MANE_select
ENST00000647793.1	NAGNAG splice site
ENST00000248564.6	MANE_select
ENST00000623178.1	confirm experimentally
ENST00000650276.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000222547.8	MANE_select
ENST00000649265.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000297268.11	LR annotation
ENST00000297268.11	MANE_select
ENST00000297273.9	MANE_select
ENST00000645624.1	NMD likely if extended
ENST00000648936.2	CAGE supported TSS
ENST00000648936.2	LR annotation
ENST00000648936.2	MANE_select
ENST00000643206.1	alternative 3' UTR
ENST00000447873.6	NP_001333646.1
ENST00000646489.1	NP_001333642.1
ENST00000642933.1	NP_001092870.1
ENST00000445866.7	NP_001092871.1
ENST00000437425.7	NP_001288068.1
ENST00000646434.1	alternative 3' UTR
ENST00000643272.1	NP_001333644.1
ENST00000645445.1	NAGNAG splice site
ENST00000646466.1	alternative 3' UTR
ENST00000644609.1	NAGNAG splice site
ENST00000646098.1	NAGNAG splice site
ENST00000645535.1	alternative 5' UTR
ENST00000646600.1	alternative 3' UTR
ENST00000642638.1	alternative 3' UTR
ENST00000643041.1	alternative 3' UTR
ENST00000644674.1	NMD likely if extended
ENST00000644087.1	alternative 3' UTR
ENST00000646301.1	alternative 3' UTR
ENST00000646682.1	alternative 3' UTR
ENST00000645920.1	alternative 3' UTR
ENST00000643368.1	NMD likely if extended
ENST00000644924.1	NMD likely if extended
ENST00000425444.2	alternative 3' UTR
ENST00000482108.1	RefSeq NP_001035242.1 or retrotransposon-derived protein PEG10 isoform 2 or ORF1 in publications
ENST00000488574.5	NP_001165909.1
ENST00000488574.5	RefSeq retrotransposon-derived protein PEG10 isoform 4
ENST00000612748.1	RefSeq NP_001165908.1 or retrotransposon-derived protein PEG10 isoform 3
ENST00000612748.1	This transcript is subject to -1 ribosomal frameshifting. This has been represented in the CDS by the addition of a 2 base intron, and as a consequence misses 1 amino acid (aa 394 from RefSeq NP_001165909.1 also called isoform 4: Ala)
ENST00000613043.1	alternative 5' UTR
ENST00000617526.4	RefSeq NP_055883.2 or retrotransposon-derived protein PEG10 isoform 1 or ORF1-2 in publications
ENST00000617526.4	This transcript is subject to -1 ribosomal frameshifting. This has been represented in the CDS by the addition of a 2 base intron, and as a consequence misses 1 amino acid (aa 318 from RefSeq NP_055883.2 also called isoform 1: Ala)
ENST00000615790.5	Evidence exists for translation initiation from an in-frame, upstream non-AUG (CUG) codon, as well as from the downstream AUG, which results in different isoforms
ENST00000615790.5	RefSeq NP_001171891.1 or retrotransposon-derived protein PEG10 isoform 6
ENST00000612941.2	Evidence exists for translation initiation from an in-frame, upstream non-AUG (CUG) codon, as well as from the downstream AUG, which results in different isoforms
ENST00000612941.2	RefSeq NP_001171890.1 or retrotransposon-derived protein PEG10 isoform 5
ENST00000612941.2	This transcript is subject to -1 ribosomal frameshifting. This has been represented in the CDS by the addition of a 2 base intron, and as a consequence misses 1 amino acid (aa 352 from RefSeq NP_001171891.1 also called isoform 6: Ala)
ENST00000413325.1	alternative 5' UTR
ENST00000433360.6	MANE_select
ENST00000422324.1	alternative 5' UTR
ENST00000666346.1	Assembled from SLRseq reads (SRP049776)
ENST00000653140.1	Assembled from SLRseq reads (SRP049776)
ENST00000222381.8	MANE_select
ENST00000265627.10	MANE_select
ENST00000222572.8	MANE_select
ENST00000428113.5	NP_665879
ENST00000325885.6	MANE_select
ENST00000667350.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669019.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669024.1	Assembled from SLRseq reads (SRP049776)
ENST00000665332.1	Assembled from SLRseq reads (SRP049776)
ENST00000668637.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666870.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651203.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000663696.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653592.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668366.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656676.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668636.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662949.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000005178.6	MANE_select
ENST00000524053.5	alternative 5' UTR
ENST00000518089.5	alternative 5' UTR
ENST00000457059.2	alternative 5' UTR
ENST00000625023.1	confirm experimentally
ENST00000265631.10	MANE_select
ENST00000493858.5	FLJ42280
ENST00000656954.1	Assembled from SLRseq reads (SRP049776)
ENST00000654988.1	Assembled from SLRseq reads (SRP049776)
ENST00000518156.3	MANE_select
ENST00000648378.1	LR annotation
ENST00000648378.1	MANE_select
ENST00000493764.1	not organism-supported
ENST00000432641.3	MANE_select
ENST00000319273.10	MANE_select
ENST00000394308.8	MANE_select
ENST00000394309.7	alternative 5' UTR
ENST00000444334.5	alternative 5' UTR
ENST00000442734.5	alternative 5' UTR
ENST00000437657.5	alternative 5' UTR
ENST00000453600.5	alternative 5' UTR
ENST00000451771.5	alternative 5' UTR
ENST00000414884.1	alternative 5' UTR
ENST00000641315.1	CAGE supported TSS
ENST00000661128.1	Assembled from SLRseq reads (SRP049776)
ENST00000650204.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000650204.1	ID: align_id:3739944|asmbl_230109
ENST00000650204.1	SLR-seq_TB0000032 : TB0000032-DNA_A01-LRAAD-01:Read_133361-Barcode=BC194:length=1941 ;
ENST00000257627.4	This is a duplication of oncemodulin , another copy is on the same chromosome different arm
ENST00000473987.2	This is a duplication of oncemodulin , another copy is on the same chromosome different arm
ENST00000297293.6	MANE_select
ENST00000297293.6	in Em:BC146773.& Em:AB029002.1, there is a gap in exon 13
ENST00000609256.2	MANE_select
ENST00000609256.2	alternative 5' UTR
ENST00000447648.7	KIAA1358
ENST00000447648.7	MANE_select
ENST00000479975.5	KIAA1358
ENST00000423128.5	alternative 5' UTR
ENST00000415086.5	alternative 5' UTR
ENST00000420697.1	alternative 5' UTR
ENST00000297290.4	MANE_select
ENST00000005260.9	MANE_select
ENST00000265634.4	MANE_select
ENST00000339375.9	MANE_select
ENST00000474857.1	not organism-supported
ENST00000445790.1	alternative 5' UTR
ENST00000417523.5	alternative 5' UTR
ENST00000456197.2	CAGE supported TSS
ENST00000456197.2	MANE_select
ENST00000663185.1	Assembled from SLRseq reads (SRP049776)
ENST00000361368.7	MANE_select
ENST00000327442.7	CAGE supported TSS
ENST00000327442.7	MANE_select
ENST00000671330.1	Assembled from SLRseq reads (SRP049776)
ENST00000262942.10	MANE_select
ENST00000432786.5	Genoscope mRNA only
ENST00000443222.6	alternative 5' UTR
ENST00000414376.5	alternative 5' UTR
ENST00000645391.1	alternative 5' UTR
ENST00000455009.6	alternative 5' UTR
ENST00000418347.6	alternative 5' UTR
ENST00000429246.6	alternative 5' UTR
ENST00000417330.6	alternative 5' UTR
ENST00000431816.6	alternative 5' UTR
ENST00000458033.6	alternative 5' UTR
ENST00000451682.5	alternative 5' UTR
ENST00000427217.6	alternative 5' UTR
ENST00000646101.2	LR annotation
ENST00000646101.2	MANE_select
ENST00000445924.5	extra A @611 in EST sequence
ENST00000350498.8	MANE_select
ENST00000403633.6	alternative 5' UTR
ENST00000496696.5	alternative 5' UTR
ENST00000222969.10	MANE_select
ENST00000456893.6	QC splicing correct
ENST00000292478.9	MANE_select
ENST00000430982.1	alternative 5' UTR
ENST00000430029.1	alternative 5' UTR
ENST00000419981.1	alternative 5' UTR
ENST00000451138.1	alternative 5' UTR
ENST00000292476.10	MANE_select
ENST00000412686.5	poor sequence at 3' end
ENST00000359832.8	NP_001003714
ENST00000292475.8	MANE_select
ENST00000488775.5	NP_001034267
ENST00000331410.10	MANE_select
ENST00000447047.6	QC splicing correct
ENST00000379724.3	NP001013276
ENST00000337673.7	MANE_select
ENST00000337673.7	QC splicing correct
ENST00000326775.10	MANE_select
ENST00000326775.10	alternative 5' UTR
ENST00000451158.5	alternative 5' UTR
ENST00000449309.2	MANE_select
ENST00000408938.2	alternative 5' UTR
ENST00000320583.9	NP_001078836
ENST00000452314.5	alternative 5' UTR
ENST00000454654.5	alternative 5' UTR
ENST00000252713.9	MANE_select
ENST00000493277.5	NP_001077425
ENST00000422164.5	alternative 5' UTR
ENST00000422647.5	alternative 5' UTR
ENST00000427931.5	alternative 5' UTR
ENST00000440391.5	NP_001009958
ENST00000394163.2	alternative 5' UTR
ENST00000431679.6	MANE_select
ENST00000453227.5	alternative 5' UTR
ENST00000394152.7	MANE_select
ENST00000431485.2	alternative 5' UTR
ENST00000222982.8	CAGE supported TSS
ENST00000222982.8	LR annotation
ENST00000222982.8	MANE_select
ENST00000469887.5	non canonical TEC
ENST00000461920.5	non canonical TEC
ENST00000463364.5	non canonical TEC
ENST00000481825.5	non canonical TEC
ENST00000466061.5	non canonical TEC
ENST00000480723.5	NMD likely if extended
ENST00000439761.3	CAGE supported TSS
ENST00000463907.5	non canonical TEC
ENST00000469622.5	NMD likely if extended
ENST00000336374.4	MANE_select
ENST00000651514.1	CAGE supported TSS
ENST00000651514.1	LR annotation
ENST00000651514.1	MANE_select
ENST00000354829.7	MANE_select
ENST00000415413.5	QC splicing correct
ENST00000433277.5	QC splicing correct
ENST00000444905.5	QC splicing correct
ENST00000463915.5	QC splicing correct
ENST00000477658.5	QC splicing correct
ENST00000491648.5	QC splicing correct
ENST00000495115.5	QC splicing correct
ENST00000349062.7	MANE_select
ENST00000312891.3	MANE_select
ENST00000292401.9	MANE_select
ENST00000292401.9	NP_001176
ENST00000663362.1	Assembled from SLRseq reads (SRP049776)
ENST00000671037.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000324306.11	MANE_select
ENST00000432317.1	alternative 5' UTR
ENST00000292450.9	MANE_select
ENST00000438937.1	alternative 5' UTR
ENST00000413658.6	NP_060185
ENST00000299667.9	MANE_select
ENST00000449785.5	alternative 5' UTR
ENST00000428683.5	alternative 5' UTR
ENST00000441298.5	alternative 5' UTR
ENST00000415068.1	alternative 5' UTR
ENST00000292393.9	alternative 5' UTR
ENST00000303904.8	MANE_select
ENST00000303887.10	MANE_select
ENST00000359593.9	MANE_select
ENST00000421755.5	alternative 3' UTR
ENST00000453269.7	MANE_select
ENST00000453269.7	alternative 5' UTR
ENST00000452041.5	alternative 5' UTR
ENST00000493322.5	alternative 5' UTR
ENST00000449571.5	alternative 5' UTR
ENST00000520135.5	alternative 5' UTR
ENST00000451699.5	alternative 5' UTR
ENST00000417349.5	alternative 5' UTR
ENST00000431404.2	alternative 5' UTR
ENST00000460673.2	alternative 5' UTR
ENST00000262932.5	MANE_select
ENST00000421390.1	alternative 5' UTR
ENST00000398075.4	MANE_select
ENST00000419037.5	QC splicing correct
ENST00000316937.8	MANE_select
ENST00000360039.9	MANE_select
ENST00000292377.4	MANE_select
ENST00000490629.5	NMD likely if extended
ENST00000426455.5	alternative 5' UTR
ENST00000416412.5	alternative 5' UTR
ENST00000615138.5	CAGE supported TSS
ENST00000615138.5	MANE_select
ENST00000422690.5	alternative 5' UTR
ENST00000439782.1	alternative 5' UTR
ENST00000675106.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000457519.5	alternative 5' UTR
ENST00000419749.5	alternative 5' UTR
ENST00000422808.5	alternative 5' UTR
ENST00000443526.5	alternative 5' UTR
ENST00000455145.5	alternative 5' UTR
ENST00000431140.5	alternative 5' UTR
ENST00000608825.1	alternative 5' UTR
ENST00000438231.2	alternative 5' UTR
ENST00000609309.2	alternative 5' UTR
ENST00000432297.6	alternative 5' UTR
ENST00000198536.7	MANE_select
ENST00000350573.2	NP_840056.1
ENST00000660409.1	Assembled from SLRseq reads (SRP049776)
ENST00000310512.4	MANE_select
ENST00000292330.3	MANE_select
ENST00000332375.4	MANE_select
ENST00000300181.7	MANE_select
ENST00000663999.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000300179.7	MANE_select
ENST00000664644.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667487.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000300176.9	MANE_select
ENST00000474713.1	Genoscope mRNA only
ENST00000622764.3	MANE_select
ENST00000622764.3	alternative 5' UTR
ENST00000614631.4	alternative 5' UTR
ENST00000485554.5	alternative 3' UTR
ENST00000310300.11	MANE_select
ENST00000241071.11	MANE_select
ENST00000465843.5	NP_036304.1
ENST00000427939.2	NP_036304.2
ENST00000653812.1	Assembled from SLRseq reads (SRP049776)
ENST00000223061.6	MANE_select
ENST00000393950.7	MANE_select
ENST00000393950.7	alternative 5' UTR
ENST00000223051.8	MANE_select
ENST00000223051.8	genebuild_only_MANE
ENST00000160382.10	MANE_select
ENST00000451587.5	alternative 5' UTR
ENST00000303210.9	MANE_select
ENST00000436220.5	Genoscope mRNA only
ENST00000436220.5	alternative 5' UTR
ENST00000424361.5	Genoscope mRNA only
ENST00000419828.5	Genoscope mRNA only
ENST00000427895.5	Genoscope mRNA only
ENST00000427895.5	alternative 5' UTR
ENST00000393926.5	alternative 5' UTR
ENST00000431068.5	alternative 5' UTR
ENST00000412215.5	alternative 5' UTR
ENST00000393924.1	alternative 5' UTR
ENST00000678049.1	MANE_select
ENST00000471340.2	not organism-supported
ENST00000303151.5	MANE_select
ENST00000457480.1	alternative 5' UTR
ENST00000252723.3	MANE_select
ENST00000613979.5	MANE_select
ENST00000358173.8	MANE_select
ENST00000354161.8	MANE_select
ENST00000434158.1	alternative 5' UTR
ENST00000200457.9	MANE_select
ENST00000611405.5	MANE_select
ENST00000611405.5	QC splicing correct
ENST00000611405.5	non canonical conserved
ENST00000614484.4	QC splicing correct
ENST00000614484.4	non canonical conserved
ENST00000448764.5	QC splicing correct
ENST00000448764.5	non canonical conserved
ENST00000478693.1	non canonical conserved
ENST00000445337.1	non canonical conserved
ENST00000388761.4	MANE_select
ENST00000672365.2	CAGE supported TSS
ENST00000241069.11	CAGE supported TSS
ENST00000241069.11	LR annotation
ENST00000241069.11	MANE_select
ENST00000411582.4	CAGE supported TSS
ENST00000411582.4	LR annotation
ENST00000428317.7	CAGE supported TSS
ENST00000428317.7	alternative 5' UTR
ENST00000412389.5	alternative 5' UTR
ENST00000441605.2	alternative 5' UTR
ENST00000441605.2	overlapping uORF
ENST00000445236.3	upstream ATG
ENST00000483366.1	am confident this is real, its the start of the gene, however the assembly is a little odd around here so cant join
ENST00000379442.7	QC splicing correct
ENST00000306151.9	MANE_select
ENST00000306151.9	QC splicing correct
ENST00000306085.11	MANE_select
ENST00000223095.5	MANE_select
ENST00000337619.11	LR annotation
ENST00000337619.11	MANE_select
ENST00000646560.1	CAGE supported TSS
ENST00000643104.1	NMD likely if extended
ENST00000249330.3	MANE_select
ENST00000445482.2	alternative 5' UTR
ENST00000300303.7	MANE_select
ENST00000455377.5	alternative 5' UTR
ENST00000444446.1	alternative 5' UTR
ENST00000223114.9	MANE_select
ENST00000649999.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000223127.8	MANE_select
ENST00000456079.1	alternative 5' UTR
ENST00000305105.3	MANE_select
ENST00000401528.5	FLJ31541
ENST00000308344.10	MANE_select
ENST00000308344.10	alternative 5' UTR
ENST00000414035.5	QC splicing correct
ENST00000412417.1	not organism-supported
ENST00000223136.5	MANE_select
ENST00000435848.1	QC splicing correct
ENST00000419422.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000315322.10	MANE_select
ENST00000498704.6	NP_001124294.1
ENST00000313669.12	MANE_select
ENST00000223167.5	MANE_select
ENST00000622516.6	CAGE supported TSS
ENST00000622516.6	LR annotation
ENST00000292535.12	MANE_select
ENST00000546411.7	CAGE supported TSS
ENST00000546411.7	LR annotation
ENST00000563237.3	MANE_select
ENST00000563237.3	not best-in-genome evidence
ENST00000496391.5	alternative 5' UTR
ENST00000397912.3	MANE_select
ENST00000482237.5	alternative 5' UTR
ENST00000495936.6	alternative 5' UTR
ENST00000468241.5	alternative 5' UTR
ENST00000403646.7	alternative 5' UTR
ENST00000498661.5	alternative 5' UTR
ENST00000473939.1	alternative 5' UTR
ENST00000292566.4	MANE_select
ENST00000292616.10	MANE_select
ENST00000465829.6	MANE_select
ENST00000495352.5	Genoscope mRNA only
ENST00000507918.5	NP_001026789.2
ENST00000507918.5	non-canonical splice donor site at exon 1
ENST00000461209.1	alternative 5' UTR
ENST00000520042.1	alternative 5' UTR
ENST00000340457.8	MANE_select
ENST00000507450.5	non-canonical splice donor site at exon 1
ENST00000333432.8	not best-in-genome evidence
ENST00000664535.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000413034.3	MANE_select
ENST00000436908.5	alternative 5' UTR
ENST00000339431.9	MANE_select
ENST00000455453.1	alternative 5' UTR
ENST00000323716.8	MANE_select
ENST00000465647.6	MANE_select
ENST00000465647.6	alternative 3' UTR
ENST00000417955.5	alternative 5' UTR
ENST00000427257.5	alternative 5' UTR
ENST00000418294.1	alternative 5' UTR
ENST00000425379.1	alternative 5' UTR
ENST00000624681.1	confirm experimentally
ENST00000249269.9	MANE_select
ENST00000443722.5	Genoscope mRNA only
ENST00000453466.1	Genoscope mRNA only
ENST00000379263.8	MANE_select
ENST00000426036.6	QC splicing correct
ENST00000457587.5	alternative 5' UTR
ENST00000679205.1	alternative 5' UTR
ENST00000292644.5	MANE_select
ENST00000292644.5	genebuild_only_MANE
ENST00000306312.8	MANE_select
ENST00000393723.2	non canonical TEC
ENST00000393727.5	non canonical TEC
ENST00000660729.1	Assembled from SLRseq reads (SRP049776)
ENST00000343529.9	NP_774959.1
ENST00000428762.6	MANE_select
ENST00000297431.9	MANE_select
ENST00000653259.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671314.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659776.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000655204.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000311117.8	CAGE supported TSS
ENST00000311117.8	LR annotation
ENST00000311117.8	MANE_select
ENST00000495267.5	alternative 5' UTR
ENST00000474203.5	alternative 5' UTR
ENST00000607968.1	CAGE supported TSS
ENST00000393651.8	MANE_select
ENST00000393651.8	NP_872634.1
ENST00000489828.5	alternative 5' UTR
ENST00000460391.5	alternative 5' UTR
ENST00000482862.1	not organism-supported
ENST00000469408.6	MANE_select
ENST00000356362.6	alternative 5' UTR
ENST00000482157.1	QC splicing correct
ENST00000257700.7	MANE_select
ENST00000480514.6	MANE_select
ENST00000419735.8	MANE_select
ENST00000472195.1	alternative 5' UTR
ENST00000317716.14	MANE_select
ENST00000455385.7	MANE_select
ENST00000464029.5	alternative 3' UTR
ENST00000681550.1	CAGE supported TSS
ENST00000222553.8	MANE_select
ENST00000681491.1	alternative 5' UTR
ENST00000680584.1	NAGNAG splice site
ENST00000424768.2	alternative 5' UTR
ENST00000681255.1	alternative 5' UTR
ENST00000680823.1	alternative 5' UTR
ENST00000681936.1	NAGNAG splice site
ENST00000681936.1	alternative 5' UTR
ENST00000680129.1	alternative 3' UTR
ENST00000680786.1	CAGE supported TSS
ENST00000609281.1	CAGE supported TSS
ENST00000651902.1	CAGE supported TSS
ENST00000650160.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000663341.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000591803.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652725.1	CAGE supported TSS
ENST00000523505.3	MANE_select
ENST00000658697.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000602761.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000490162.3	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000490162.3	ID: align_id:1369526|asmbl_89429
ENST00000490162.3	pacbio_capture_seq_hsK562 : m150413_231014_42137_c100793412550000001823172010081550_s1_p0_156615_ccs ;
ENST00000659396.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659665.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655590.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000496166.6	MANE_select
ENST00000496166.6	alternative 5' UTR
ENST00000359195.3	alternative 5' UTR
ENST00000265717.5	MANE_select
ENST00000468410.5	alternative 5' UTR
ENST00000478930.5	alternative 5' UTR
ENST00000464009.1	alternative 5' UTR
ENST00000222574.9	MANE_select
ENST00000468401.1	alternative 5' UTR
ENST00000497535.5	alternative 5' UTR
ENST00000485846.5	alternative 5' UTR
ENST00000479011.1	alternative 5' UTR
ENST00000463790.1	QC splicing correct
ENST00000297135.9	MANE_select
ENST00000297135.9	upstream ATG
ENST00000347053.8	upstream ATG
ENST00000393603.7	upstream ATG
ENST00000605888.1	CAGE supported TSS
ENST00000304402.6	MANE_select
ENST00000265720.8	MANE_select
ENST00000610269.1	CAGE supported TSS
ENST00000005259.9	MANE_select
ENST00000445771.6	NP_001008405.1
ENST00000479917.5	alternative 5' UTR
ENST00000421217.5	alternative 5' UTR
ENST00000457837.5	alternative 5' UTR
ENST00000379117.6	alternative 5' UTR
ENST00000473124.1	alternative 5' UTR
ENST00000491150.5	NP_001008406.1
ENST00000668981.1	Assembled from SLRseq reads (SRP049776)
ENST00000662671.1	Assembled from SLRseq reads (SRP049776)
ENST00000440512.4	Assembled from SLRseq reads (SRP049776)
ENST00000658036.1	Assembled from SLRseq reads (SRP049776)
ENST00000644269.2	LR annotation
ENST00000644269.2	MANE_select
ENST00000440056.1	alternative 5' UTR
ENST00000492030.2	QC splicing correct
ENST00000658766.1	Assembled from SLRseq reads (SRP049776)
ENST00000653575.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663315.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671091.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440859.8	MANE_select
ENST00000420796.1	not organism-supported
ENST00000340010.10	MANE_select
ENST00000453332.1	alternative 5' UTR
ENST00000205402.10	MANE_select
ENST00000453354.5	NMD likely if extended
ENST00000678984.1	align_id:3741927|asmbl_232092
ENST00000677957.1	align_id:3741928|asmbl_232093
ENST00000676744.1	align_id:3741917|asmbl_232082
ENST00000468518.2	align_id:3741914|asmbl_232079
ENST00000474380.2	align_id:3741901|asmbl_232066
ENST00000678310.1	align_id:3741910|asmbl_232075
ENST00000468999.2	align_id:3741911|asmbl_232076
ENST00000679200.1	align_id:3741905|asmbl_232070
ENST00000393561.6	align_id:3741894|asmbl_232059
ENST00000677801.1	align_id:3741909|asmbl_232074
ENST00000678698.1	align_id:3741904|asmbl_232069
ENST00000677485.1	align_id:3741895|asmbl_232060
ENST00000222399.11	MANE_select
ENST00000677101.1	align_id:3741896|asmbl_232061
ENST00000676574.1	align_id:3741907|asmbl_232072
ENST00000678892.1	align_id:3741902|asmbl_232067
ENST00000678892.1	align_id:3741920|asmbl_232085
ENST00000677144.1	align_id:3741898|asmbl_232063
ENST00000677793.1	align_id:3741899|asmbl_232064
ENST00000677588.1	align_id:3741906|asmbl_232071
ENST00000678704.1	align_id:3741897|asmbl_232062
ENST00000676777.1	align_id:3741913|asmbl_232078
ENST00000677883.1	NMD likely if extended
ENST00000678232.1	align_id:3741915|asmbl_232080
ENST00000677652.1	align_id:3741916|asmbl_232081
ENST00000678346.1	align_id:3741926|asmbl_232091
ENST00000679173.1	align_id:3741921|asmbl_232086
ENST00000676920.1	align_id:3741919|asmbl_232084
ENST00000679244.1	align_id:3741918|asmbl_232083
ENST00000678266.1	align_id:3741923|asmbl_232088
ENST00000677994.1	align_id:3741922|asmbl_232087
ENST00000677734.1	align_id:3741925|asmbl_232090
ENST00000393559.2	alternative 5' UTR
ENST00000388781.8	MANE_select
ENST00000388781.8	genebuild_only_MANE
ENST00000522550.2	Isoform C
ENST00000379028.8	MANE_select
ENST00000351718.8	Isoform B
ENST00000417701.5	alternative 5' UTR
ENST00000419936.5	alternative 5' UTR
ENST00000456431.5	alternative 5' UTR
ENST00000418239.1	alternative 5' UTR
ENST00000257694.13	MANE_select
ENST00000426128.6	alternative 5' UTR
ENST00000422087.5	alternative 5' UTR
ENST00000436062.5	alternative 5' UTR
ENST00000427008.1	alternative 5' UTR
ENST00000415498.2	alternative 5' UTR
ENST00000415914.4	Isoform 1
ENST00000415914.4	MANE_select
ENST00000313516.5	Isoform 2
ENST00000313516.5	NP_872335.2
ENST00000412935.1	QC splicing correct
ENST00000249356.4	MANE_select
ENST00000440208.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668672.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661717.1	Assembled from SLRseq reads (SRP049776)
ENST00000670086.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658357.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667232.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658032.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666128.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000657059.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670490.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000405709.7	MANE_select
ENST00000331762.7	alternative 5' UTR
ENST00000452895.5	alternative 5' UTR
ENST00000452753.1	alternative 5' UTR
ENST00000422987.3	alternative 5' UTR
ENST00000421101.1	alternative 5' UTR
ENST00000464835.1	alternative 5' UTR
ENST00000308478.10	MANE_select
ENST00000308478.10	alternative 5' UTR
ENST00000417165.1	CAGE supported TSS
ENST00000469898.1	not organism-supported
ENST00000660369.1	Assembled from SLRseq reads (SRP049776)
ENST00000666594.1	Assembled from SLRseq reads (SRP049776)
ENST00000361822.8	MANE_select
ENST00000432734.1	alternative 5' UTR
ENST00000005558.8	alternative 5' UTR
ENST00000445335.1	alternative 5' UTR
ENST00000417662.1	alternative 5' UTR
ENST00000403825.8	CAGE supported TSS
ENST00000403825.8	alternative 5' UTR
ENST00000440625.5	alternative 5' UTR
ENST00000466459.5	NMD likely if extended
ENST00000466459.5	QC splicing correct
ENST00000676282.1	pseudogene transcript
ENST00000439068.6	alternative 5' UTR
ENST00000455302.5	Isoform 2
ENST00000455302.5	alternative 5' UTR
ENST00000312849.4	Isoform 1
ENST00000312849.4	MANE_select
ENST00000312849.4	alternative 5' UTR
ENST00000657067.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668050.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667178.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662309.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663988.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667242.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662625.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655918.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657817.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667747.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668809.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665310.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664143.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667580.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661587.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663080.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663814.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659268.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666635.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668947.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664010.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662984.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659758.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669892.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667945.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657316.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661554.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670567.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665657.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654684.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670213.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652784.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661783.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656697.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659368.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657014.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653349.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653349.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000670420.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000312814.11	MANE_select
ENST00000454074.5	alternative 5' UTR
ENST00000418785.5	(Bos taurus)
ENST00000297145.9	MANE_select
ENST00000668658.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653138.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671176.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664332.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664332.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000655518.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657442.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669304.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663899.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662721.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667780.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667715.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666073.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655822.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654823.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668166.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666383.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663321.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671010.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665351.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662144.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657800.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654962.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670812.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663489.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655508.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658790.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659589.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653618.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666984.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664053.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668296.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655743.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663513.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668427.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668328.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657319.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667102.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661750.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668532.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657218.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000624724.1	confirm experimentally
ENST00000610164.1	not organism-supported
ENST00000449591.2	alternative 5' UTR
ENST00000424100.2	MANE_select
ENST00000424100.2	alternative 5' UTR
ENST00000449735.1	alternative 5' UTR
ENST00000438062.5	alternative 5' UTR
ENST00000487573.1	alternative 5' UTR
ENST00000397764.8	MANE_select
ENST00000441359.1	alternative 5' UTR
ENST00000413744.1	alternative 5' UTR
ENST00000439551.1	alternative 5' UTR
ENST00000670885.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000284601.4	MANE_select
ENST00000635638.1	confirm experimentally
ENST00000495516.1	not organism-supported
ENST00000635109.1	confirm experimentally
ENST00000634623.1	confirm experimentally
ENST00000393494.6	alternative 5' UTR
ENST00000350908.9	MANE_select
ENST00000393498.6	GENCODE experimental pipeline
ENST00000393495.7	GENCODE experimental pipeline
ENST00000635534.1	CAGE supported TSS
ENST00000360232.8	NP_683697.2
ENST00000452963.6	QC splicing correct
ENST00000634372.1	NMD likely if extended
ENST00000393486.5	CAGE supported TSS
ENST00000448022.1	CAGE supported TSS
ENST00000423503.1	alternative 5' UTR
ENST00000660905.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669990.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668211.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659423.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419883.1	QC splicing correct
ENST00000265440.12	MANE_select
ENST00000393485.5	SK name: TFEC_transcript_variant_1
ENST00000358204.9	MANE_select
ENST00000393481.6	SK name: TES_transcript_variant_1
ENST00000656866.1	Assembled from SLRseq reads (SRP049776)
ENST00000222693.5	MANE_select
ENST00000341049.7	MANE_select
ENST00000405348.6	QC splicing correct
ENST00000650435.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000397752.8	MANE_select
ENST00000454623.1	GENCODE experimental pipeline
ENST00000484325.1	alternative 5' UTR
ENST00000361183.8	MANE_select
ENST00000393451.7	NP_060882
ENST00000323984.8	MANE_select
ENST00000417919.5	alternative 5' UTR
ENST00000449366.5	alternative 5' UTR
ENST00000434836.5	alternative 5' UTR
ENST00000477742.5	alternative 5' UTR
ENST00000420755.5	alternative 5' UTR
ENST00000543837.5	This variant corresponds to the official locus ST7OT3, i.e. ST7 overlapping transcript 3 (non-coding RNA)
ENST00000466018.5	novel transcript
ENST00000470996.4	novel transcript
ENST00000658710.1	Assembled from SLRseq reads (SRP049776)
ENST00000665127.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000265441.8	MANE_select
ENST00000647844.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000491214.1	QC splicing correct
ENST00000003084.11	LR annotation
ENST00000003084.11	MANE_select
ENST00000426809.5	QC splicing correct
ENST00000472848.1	NMD likely if extended
ENST00000610149.1	nested 454 RNA-Seq supported
ENST00000621535.1	IG2KN0F02I1K5B
ENST00000667297.1	Assembled from SLRseq reads (SRP049776)
ENST00000284629.7	MANE_select
ENST00000428663.1	QC splicing correct
ENST00000160373.8	MANE_select
ENST00000454375.5	alternative 5' UTR
ENST00000412853.1	alternative 5' UTR
ENST00000249299.7	MANE_select
ENST00000265224.9	MANE_select
ENST00000265224.9	NP_062618
ENST00000417525.5	upstream_ATG-53
ENST00000664990.1	Assembled from SLRseq reads (SRP049776)
ENST00000660268.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426413.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456062.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000421825.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000331113.9	MANE_select
ENST00000222747.8	MANE_select
ENST00000415871.5	alternative 5' UTR
ENST00000441017.5	alternative 5' UTR
ENST00000433758.5	alternative 5' UTR
ENST00000424710.5	alternative 5' UTR
ENST00000430985.1	alternative 5' UTR
ENST00000339121.9	NP_938008
ENST00000315870.10	MANE_select
ENST00000310396.10	MANE_select
ENST00000428526.5	alternative 5' UTR
ENST00000657332.1	Assembled from RACEseq reads
ENST00000361301.6	NP_057171
ENST00000222462.3	MANE_select
ENST00000359943.8	MANE_select
ENST00000412653.5	alternative 5' UTR
ENST00000432702.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000432702.2	ID: align_id:1369916|asmbl_89819
ENST00000432702.2	pacbio_capture_seq_hsUndeter : m150420_124914_42137_c100793212550000001823172010081516_s1_p0_26485_ccs ;
ENST00000393386.7	CAGE supported TSS
ENST00000393386.7	LR annotation
ENST00000393386.7	MANE_select
ENST00000417368.7	MANE_select
ENST00000681213.1	CAGE supported TSS
ENST00000679419.1	CAGE supported TSS
ENST00000681626.1	CAGE supported TSS
ENST00000393376.5	alternative 5' UTR
ENST00000662395.1	Assembled from SLRseq reads (SRP049776)
ENST00000668971.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655802.1	Assembled from SLRseq reads (SRP049776)
ENST00000657866.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655568.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654647.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000442488.7	MANE_select
ENST00000442488.7	QC splicing correct
ENST00000418046.1	alternative 5' UTR
ENST00000653165.1	Assembled from SLRseq reads (SRP049776)
ENST00000449022.7	MANE_select
ENST00000340112.3	MANE_select
ENST00000434824.2	MANE_select
ENST00000249284.3	MANE_select
ENST00000420146.2	not organism-supported
ENST00000194130.7	MANE_select
ENST00000324698.11	MANE_select
ENST00000466202.5	alternative 5' UTR
ENST00000355749.7	MANE_select
ENST00000676730.1	upstream ATG
ENST00000677251.1	upstream ATG
ENST00000677264.1	upstream ATG
ENST00000451215.6	MANE_select
ENST00000451215.6	alternative 5' UTR
ENST00000434204.5	alternative 5' UTR
ENST00000437535.5	alternative 5' UTR
ENST00000447789.5	alternative 5' UTR
ENST00000458573.3	MANE_select
ENST00000223023.5	MANE_select
ENST00000489978.5	alternative 5' UTR
ENST00000488323.5	alternative 5' UTR
ENST00000223026.9	MANE_select
ENST00000223026.9	alternative 5' UTR
ENST00000413927.5	alternative 5' UTR
ENST00000460182.5	alternative 5' UTR
ENST00000340011.9	NP_003108
ENST00000455783.3	MANE_select
ENST00000667657.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000660727.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658206.1	Assembled from SLRseq reads (SRP049776)
ENST00000669475.1	Assembled from SLRseq reads (SRP049776)
ENST00000665593.1	Assembled from SLRseq reads (SRP049776)
ENST00000668121.1	Assembled from SLRseq reads (SRP049776)
ENST00000467017.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000624256.1	confirm experimentally
ENST00000303921.3	MANE_select
ENST00000647713.1	LOC100507462
ENST00000357628.8	LR annotation
ENST00000357628.8	MANE_select
ENST00000653274.1	NAGNAG splice site
ENST00000661898.1	NAGNAG splice site
ENST00000662531.1	NAGNAG splice site
ENST00000653241.1	alternative 5' UTR
ENST00000653892.1	NAGNAG splice site
ENST00000664366.1	NAGNAG splice site
ENST00000664366.1	alternative 5' UTR
ENST00000655761.1	alternative 5' UTR
ENST00000668382.1	alternative 5' UTR
ENST00000609702.5	alternative 5' UTR
ENST00000660851.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659682.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661643.1	Assembled from SLRseq reads (SRP049776)
ENST00000657167.1	Assembled from SLRseq reads (SRP049776)
ENST00000667793.1	Assembled from SLRseq reads (SRP049776)
ENST00000657213.1	Assembled from SLRseq reads (SRP049776)
ENST00000670073.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657243.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664377.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657149.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667446.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657042.1	Assembled from SLRseq reads (SRP049776)
ENST00000663263.1	Assembled from SLRseq reads (SRP049776)
ENST00000655668.1	Assembled from SLRseq reads (SRP049776)
ENST00000660124.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661562.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653619.1	Assembled from SLRseq reads (SRP049776)
ENST00000667489.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000339582.7	MANE_select
ENST00000480995.5	non canonical TEC
ENST00000457830.1	alternative 5' UTR
ENST00000465800.1	non canonical TEC
ENST00000412160.1	alternative 5' UTR
ENST00000657493.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660824.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667616.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000393313.5	alternative 5' UTR
ENST00000265827.8	MANE_select
ENST00000393312.5	alternative 5' UTR
ENST00000434602.5	alternative 5' UTR
ENST00000436992.5	alternative 5' UTR
ENST00000439506.1	Em:DQ655936.2
ENST00000439506.1	alternative 5' UTR
ENST00000321407.3	MANE_select
ENST00000000233.10	MANE_select
ENST00000265825.6	MANE_select
ENST00000341640.6	NP_006184.1
ENST00000639438.3	MANE_select
ENST00000354725.8	MANE_select
ENST00000249363.4	MANE_select
ENST00000476782.5	alternative 5' UTR
ENST00000478726.1	alternative 5' UTR
ENST00000308868.5	MANE_select
ENST00000223073.6	MANE_select
ENST00000480290.5	Genoscope mRNA only
ENST00000495931.1	alternative 5' UTR
ENST00000338791.11	1bp mismatch at donor splice site of exon 3 in cDNA Em:J05272.1
ENST00000338791.11	MANE_select
ENST00000338791.11	NP_000874.2
ENST00000354269.9	NP_001096075.1
ENST00000348127.10	NP_899066.1
ENST00000435296.2	alternative 5' UTR
ENST00000257696.5	MANE_select
ENST00000466473.1	Genoscope mRNA only
ENST00000262432.13	MANE_select
ENST00000608477.1	CAGE supported TSS
ENST00000605862.5	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000605862.5	ID: align_id:1370127|asmbl_90030
ENST00000605862.5	pacbio_capture_seq_hsBrain : m150410_201228_42137_c100785822550000001823156308111530_s1_p0_8352_ccs, m150412_022930_42137_c100785822550000001823156308111537_s1_p0_64590_ccs ; pacbio_capture_seq_hsTestes : m150414_204510_42137_c100793412550000001823172010081555_s1_p0_121785_ccs ; pacbio_capture_seq_hsHeart : m150426_134437_42137_c100813572550000001823175210081506_s1_p0_55066_ccs ;
ENST00000641605.1	non canonical conserved
ENST00000641987.1	alternative 3' UTR
ENST00000477515.3	non canonical conserved
ENST00000483459.1	NMD likely if extended
ENST00000535011.6	NP_001186602.1
ENST00000542996.6	NP_001186601.1
ENST00000249364.9	MANE_select
ENST00000479257.5	NP_001186600.1
ENST00000493278.1	alternative 3' UTR
ENST00000249389.3	MANE_select
ENST00000249389.3	upstream ATG
ENST00000485998.6	alternative 5' UTR
ENST00000459946.5	alternative 5' UTR
ENST00000472049.1	alternative 5' UTR
ENST00000488925.1	alternative 5' UTR
ENST00000297788.9	MANE_select
ENST00000325888.13	MANE_select
ENST00000249289.5	MANE_select
ENST00000609480.4	MANE_select
ENST00000609480.4	QC splicing correct
ENST00000652525.1	alternative 5' UTR
ENST00000489702.6	alternative 5' UTR
ENST00000357234.10	CAGE supported TSS
ENST00000357234.10	LR annotation
ENST00000357234.10	MANE_select
ENST00000479582.5	alternative 5' UTR
ENST00000464557.5	alternative 5' UTR
ENST00000652142.1	NMD likely if extended
ENST00000650798.1	NMD likely if extended
ENST00000467002.1	alternative 5' UTR
ENST00000473745.5	alternative 5' UTR
ENST00000486685.3	MANE_select
ENST00000249373.8	LR annotation
ENST00000249373.8	MANE_select
ENST00000460109.5	NP_001124194
ENST00000474594.5	NP_001124195
ENST00000668770.1	Assembled from SLRseq reads (SRP049776)
ENST00000249344.7	MANE_select
ENST00000462322.3	MANE_select
ENST00000608694.1	CAGE supported TSS
ENST00000393232.6	MANE_select
ENST00000393232.6	genebuild_only_MANE
ENST00000660838.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000355621.8	MANE_select
ENST00000649897.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000358303.9	MANE_select
ENST00000358303.9	non canonical U12
ENST00000467642.5	non canonical U12
ENST00000648450.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648450.1	non canonical U12
ENST00000481503.5	non canonical U12
ENST00000480193.5	non canonical U12
ENST00000470651.1	non canonical U12
ENST00000484432.1	non canonical U12
ENST00000335420.10	MANE_select
ENST00000468226.1	alternative 5' UTR
ENST00000664494.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000397622.7	MANE_select
ENST00000471077.2	alternative 5' UTR
ENST00000648806.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000297819.4	MANE_select
ENST00000222481.9	MANE_select
ENST00000470542.5	NMD likely if extended
ENST00000222482.10	MANE_select
ENST00000486598.1	alternative 5' UTR
ENST00000497503.5	alternative 5' UTR
ENST00000463587.5	alternative 5' UTR
ENST00000461828.5	alternative 5' UTR
ENST00000474905.6	MANE_select
ENST00000474905.6	alternative 5' UTR
ENST00000494311.1	alternative 5' UTR
ENST00000466363.6	alternative 5' UTR
ENST00000431780.6	NP_001120914
ENST00000393213.7	alternative 5' UTR
ENST00000481342.5	alternative 5' UTR
ENST00000011292.8	Genoscope mRNA only
ENST00000011292.8	MANE_select
ENST00000476062.5	alternative 5' UTR
ENST00000484324.1	Genoscope mRNA only
ENST00000223208.10	MANE_select
ENST00000676312.1	alternative 5' UTR
ENST00000676115.1	alternative 3' UTR
ENST00000675803.1	CAGE supported TSS
ENST00000492389.6	alternative 3' UTR
ENST00000475282.6	CAGE supported TSS
ENST00000475282.6	alternative 5' UTR
ENST00000472739.6	CAGE supported TSS
ENST00000334451.6	alternative 3' UTR
ENST00000648778.1	CAGE supported TSS
ENST00000648778.1	LR annotation
ENST00000427521.6	alternative 5' UTR
ENST00000378576.9	alternative 5' UTR
ENST00000399874.6	alternative 5' UTR
ENST00000433159.5	alternative 5' UTR
ENST00000421001.5	alternative 5' UTR
ENST00000223215.10	MANE_select
ENST00000462132.6	alternative 5' UTR
ENST00000437637.6	alternative 5' UTR
ENST00000458161.2	alternative 5' UTR
ENST00000463263.1	QC splicing correct
ENST00000425248.5	MANE_select
ENST00000356588.8	MANE_select
ENST00000356588.8	alternative 5' UTR
ENST00000443954.5	alternative 5' UTR
ENST00000438346.1	alternative 5' UTR
ENST00000667779.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000583337.4	CAGE supported TSS
ENST00000583337.4	LR annotation
ENST00000583337.4	MANE_select
ENST00000659385.1	Assembled from RACEseq reads
ENST00000447430.1	Genoscope mRNA only
ENST00000653887.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664231.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666086.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432045.6	MIR29B1 host
ENST00000416992.6	alternative 5' UTR
ENST00000352689.11	MANE_select
ENST00000648242.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000655177.1	Assembled from SLRseq reads (SRP049776)
ENST00000659539.1	Assembled from SLRseq reads (SRP049776)
ENST00000653823.1	Assembled from SLRseq reads (SRP049776)
ENST00000656518.1	Assembled from SLRseq reads (SRP049776)
ENST00000656389.1	Assembled from SLRseq reads (SRP049776)
ENST00000670684.1	Assembled from SLRseq reads (SRP049776)
ENST00000653124.1	Assembled from SLRseq reads (SRP049776)
ENST00000447904.6	Assembled from SLRseq reads (SRP049776)
ENST00000454515.6	Assembled from SLRseq reads (SRP049776)
ENST00000444245.6	Assembled from SLRseq reads (SRP049776)
ENST00000663485.1	Assembled from SLRseq reads (SRP049776)
ENST00000669897.1	Assembled from SLRseq reads (SRP049776)
ENST00000416220.6	Assembled from SLRseq reads (SRP049776)
ENST00000378555.8	MANE_select
ENST00000378555.8	NP_001018121.1
ENST00000656736.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000321063.8	NAGNAG splice site
ENST00000423507.6	QC splicing correct
ENST00000332558.8	FLJ40288
ENST00000663581.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000262570.10	MANE_select
ENST00000457942.1	NMD likely if extended
ENST00000253861.5	MANE_select
ENST00000378509.9	MANE_select
ENST00000656533.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669960.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664174.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661597.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000663723.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660417.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666435.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659058.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656398.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669463.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000607945.1	CAGE supported TSS
ENST00000665177.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657533.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665229.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668753.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000609619.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660944.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660944.1	CAGE supported TSS
ENST00000609209.1	CAGE supported TSS
ENST00000285930.9	MANE_select
ENST00000359579.5	MANE_select
ENST00000457545.7	MANE_select
ENST00000418040.5	alternative 5' UTR
ENST00000393132.2	alternative 5' UTR
ENST00000344924.8	MANE_select
ENST00000443095.1	alternative 5' UTR
ENST00000417172.5	QC splicing correct
ENST00000417172.5	alternative 5' UTR
ENST00000436461.6	alternative 5' UTR
ENST00000454108.5	alternative 5' UTR
ENST00000361675.7	MANE_select
ENST00000435928.1	alternative 5' UTR
ENST00000665703.1	Assembled from SLRseq reads (SRP049776)
ENST00000436302.6	MANE_select
ENST00000435976.6	QC splicing correct
ENST00000424142.5	alternative 5' UTR
ENST00000393114.8	MANE_select
ENST00000430372.1	NMD exception
ENST00000430372.1	QC splicing correct
ENST00000275767.3	MANE_select
ENST00000670978.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423565.5	QC splicing correct
ENST00000423565.5	non canonical U12
ENST00000354475.5	Aa257 different from Sw:A4D1P6.1  Leu to Pro
ENST00000354475.5	MANE_select
ENST00000667288.1	upstream ATG
ENST00000285968.11	MANE_select
ENST00000507606.3	MANE_select
ENST00000378428.3	alternative 5' UTR
ENST00000422620.1	alternative 5' UTR
ENST00000338588.8	MANE_select
ENST00000338588.8	genebuild_only_MANE
ENST00000419211.2	Assembled from SLRseq reads (SRP049776)
ENST00000393085.4	MANE_select
ENST00000657485.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657456.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000668062.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668896.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659747.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668668.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670875.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656605.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608269.1	MIR490
ENST00000680005.1	MANE_select
ENST00000680005.1	alternative 5' UTR
ENST00000320658.9	alternative 5' UTR
ENST00000453373.5	alternative 5' UTR
ENST00000401861.1	alternative 5' UTR
ENST00000348225.7	MANE_select
ENST00000393083.2	Genoscope mRNA only
ENST00000448365.1	QC splicing correct
ENST00000650394.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000664435.1	Assembled from SLRseq reads (SRP049776)
ENST00000614521.2	MANE_select
ENST00000614521.2	align_id:3743702|asmbl_233867
ENST00000460662.2	not organism-supported
ENST00000330387.11	MANE_select
ENST00000468877.2	non canonical TEC
ENST00000242375.8	MANE_select
ENST00000343526.9	MANE_select
ENST00000674285.1	CAGE supported TSS
ENST00000674285.1	MANE_select
ENST00000310018.7	LR annotation
ENST00000310018.7	MANE_select
ENST00000310018.7	NP_065683.2
ENST00000645515.1	alternative 5' UTR
ENST00000478480.2	CAGE supported TSS
ENST00000353492.4	alternative 5' UTR
ENST00000483139.1	alternative 5' UTR
ENST00000442682.7	MANE_select
ENST00000442682.7	NP_001078898.1
ENST00000440172.5	NP_065961.2
ENST00000422774.2	MANE_select
ENST00000275766.2	MANE_select
ENST00000242351.10	MANE_select
ENST00000242351.10	Q7Z2W4-1
ENST00000478836.6	non canonical TEC
ENST00000464848.5	MANE_select
ENST00000473989.8	MANE_select
ENST00000297534.7	MANE_select
ENST00000354926.9	MANE_select
ENST00000354926.9	NP001231514.1
ENST00000608266.1	CAGE supported TSS
ENST00000340940.5	MANE_select
ENST00000340940.5	Sw:A4D1S0-1
ENST00000422142.7	MANE_select
ENST00000406875.8	MANE_select
ENST00000438104.6	alternative 5' UTR
ENST00000336425.10	upstream ATG
ENST00000458722.6	upstream ATG
ENST00000448866.7	MANE_select
ENST00000448866.7	alternative 5' UTR
ENST00000411653.6	upstream ATG
ENST00000263549.8	MANE_select
ENST00000397560.7	MANE_select
ENST00000326232.14	MANE_select
ENST00000491505.1	alternative 5' UTR
ENST00000537763.6	MANE_select
ENST00000537763.6	alternative 5' UTR
ENST00000255977.7	MANE_select
ENST00000471104.5	alternative 5' UTR
ENST00000467513.5	alternative 5' UTR
ENST00000494939.1	alternative 5' UTR
ENST00000475180.5	alternative 5' UTR
ENST00000481705.1	NMD likely if extended
ENST00000496613.6	MANE_select
ENST00000496613.6	alternative 5' UTR
ENST00000491728.5	alternative 5' UTR
ENST00000489552.1	alternative 5' UTR
ENST00000477488.1	alternative 5' UTR
ENST00000649584.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000072869.9	MANE_select
ENST00000482954.5	alternative 5' UTR
ENST00000476279.5	Genoscope mRNA only
ENST00000476279.5	alternative 3' UTR
ENST00000465506.5	alternative 3' UTR
ENST00000247866.9	MANE_select
ENST00000464566.5	alternative 3' UTR
ENST00000472695.5	QC splicing correct
ENST00000472695.5	alternative 5' UTR
ENST00000476470.5	QC splicing correct
ENST00000476470.5	alternative 5' UTR
ENST00000496384.7	NP_001341538.1
ENST00000644969.2	CAGE supported TSS
ENST00000644969.2	MANE_select
ENST00000642808.1	NMD likely if extended
ENST00000324787.10	MANE_select
ENST00000393008.7	alternative 5' UTR
ENST00000496958.5	alternative 5' UTR
ENST00000469351.1	alternative 5' UTR
ENST00000565468.6	MANE_select
ENST00000648190.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000666392.1	Assembled from SLRseq reads (SRP049776)
ENST00000663125.1	Assembled from SLRseq reads (SRP049776)
ENST00000668372.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649286.2	CAGE supported TSS
ENST00000649286.2	LR annotation
ENST00000649286.2	MANE_select
ENST00000648068.1	alternative 5' UTR
ENST00000650547.1	alternative 5' UTR
ENST00000536163.6	MANE_select
ENST00000482493.1	not organism-supported
ENST00000397541.6	MANE_select
ENST00000498107.5	alternative 5' UTR
ENST00000265304.11	MANE_select
ENST00000467681.5	alternative 5' UTR
ENST00000465582.5	alternative 3' UTR
ENST00000484178.5	alternative 5' UTR
ENST00000473783.5	alternative 5' UTR
ENST00000481508.1	alternative 5' UTR
ENST00000247879.2	MANE_select
ENST00000247881.4	MANE_select
ENST00000247883.5	MANE_select
ENST00000350549.8	MANE_select
ENST00000438520.1	alternative 5' UTR
ENST00000465654.5	alternative 5' UTR
ENST00000475668.6	MANE_select
ENST00000475668.6	confirm experimentally
ENST00000641559.1	ENA ID EGAS00001001486
ENST00000641559.1	MANE_select
ENST00000641559.1	alternative 5' UTR
ENST00000546910.6	MANE_select
ENST00000547270.1	MANE_select
ENST00000477922.3	confirm experimentally
ENST00000477922.3	not best-in-genome evidence
ENST00000547058.6	MANE_select
ENST00000552471.1	alternative 5' UTR
ENST00000476502.1	P
ENST00000476502.1	TRBV1*01
ENST00000455382.2	F
ENST00000455382.2	TRBV2*01
ENST00000390387.3	F
ENST00000390387.3	TRBV3-1*01
ENST00000390357.3	F
ENST00000390357.3	TRBV4-1*01
ENST00000390381.3	F
ENST00000390381.3	TRBV5-1*01
ENST00000390353.2	F
ENST00000390353.2	TRBV6-1*01
ENST00000547918.2	ORF
ENST00000547918.2	TRBV7-1*01
ENST00000390392.3	F
ENST00000390392.3	TRBV4-2*01
ENST00000390359.3	F
ENST00000390359.3	TRBV7-8*01
ENST00000390379.1	F
ENST00000390379.1	TRBV6-9*01
ENST00000390378.1	ORF
ENST00000390378.1	QC splicing correct
ENST00000390378.1	TRBV5-7*01
ENST00000390377.1	F
ENST00000390377.1	TRBV7-7*01
ENST00000390376.2	F
ENST00000390376.2	QC splicing correct
ENST00000390376.2	TRBV6-8*01
ENST00000390375.2	F
ENST00000390375.2	TRBV5-6*01
ENST00000390374.3	F
ENST00000390374.3	TRBV7-6*01
ENST00000390373.2	ORF
ENST00000390373.2	TRBV6-7*01
ENST00000390372.3	F
ENST00000390372.3	TRBV5-5*01
ENST00000390382.3	P
ENST00000390382.3	TRBV7-5*01
ENST00000390371.3	F
ENST00000390371.3	TRBV6-6*01
ENST00000454561.2	F
ENST00000454561.2	TRBV5-4*01
ENST00000390369.2	F
ENST00000390369.2	QC splicing correct
ENST00000390369.2	TRBV7-4*01
ENST00000390368.2	F
ENST00000390368.2	TRBV6-5*01
ENST00000489763.1	P
ENST00000489763.1	TRBV12-2*01
ENST00000471935.1	F
ENST00000471935.1	TRBV11-2*01
ENST00000471935.1	sequence error
ENST00000471935.1	suspected genomic sequence error affecting CDS in exon 1
ENST00000426318.2	F
ENST00000426318.2	TRBV10-2*01
ENST00000479785.1	P
ENST00000479785.1	TRBV12-1*01
ENST00000390367.3	F
ENST00000390367.3	TRBV11-1*01
ENST00000390364.3	F
ENST00000390364.3	TRBV10-1*01
ENST00000390363.2	F
ENST00000390363.2	TRBV9*01
ENST00000390362.1	ORF
ENST00000390362.1	QC splicing correct
ENST00000390362.1	TRBV5-3*01
ENST00000475637.1	P
ENST00000475637.1	TRBV8-2*01
ENST00000390361.3	F
ENST00000390361.3	TRBV7-3*01
ENST00000390360.3	F
ENST00000390360.3	TRBV6-4*01
ENST00000489095.1	P
ENST00000489095.1	TRBV5-2*01
ENST00000481590.1	P
ENST00000481590.1	TRBV8-1*01
ENST00000390393.3	F
ENST00000390393.3	TRBV19*01
ENST00000390394.3	F
ENST00000390394.3	TRBV20-1*01
ENST00000453262.2	P
ENST00000453262.2	TRBV21-1*01
ENST00000424543.2	P
ENST00000424543.2	TRBV22-1*01
ENST00000390396.1	ORF
ENST00000390396.1	QC splicing correct
ENST00000390396.1	TRBV23-1*01
ENST00000390397.2	F
ENST00000390397.2	TRBV24-1*01
ENST00000604952.1	not best-in-genome evidence
ENST00000390398.3	F
ENST00000390398.3	TRBV25-1*01
ENST00000498804.1	P
ENST00000498804.1	TRBVA*01
ENST00000456572.2	P
ENST00000456572.2	TRBV26*01
ENST00000477100.1	P
ENST00000477100.1	TRBVB*01
ENST00000390399.3	TRBV27*01
ENST00000390400.2	F
ENST00000390400.2	TRBV28*01
ENST00000663830.1	Assembled from SLRseq reads (SRP049776)
ENST00000422143.2	F
ENST00000422143.2	TRBV29-1*01
ENST00000486171.5	not best-in-genome evidence
ENST00000311737.12	MANE_select
ENST00000390412.1	F
ENST00000390412.1	TRBJ2-1*01
ENST00000390413.1	F
ENST00000390413.1	TRBJ2-2*01
ENST00000390414.1	ORF
ENST00000390414.1	TRBJ2-2P*01
ENST00000390415.1	F
ENST00000390415.1	TRBJ2-3*01
ENST00000390416.1	F
ENST00000390416.1	TRBJ2-4*01
ENST00000390417.1	F
ENST00000390417.1	TRBJ2-5*01
ENST00000390418.1	F
ENST00000390418.1	TRBJ2-6*01
ENST00000390419.1	F
ENST00000390419.1	TRBJ2-7*01
ENST00000466254.1	F
ENST00000466254.1	TRBC2*01
ENST00000417977.2	F
ENST00000417977.2	TRBV30*01
ENST00000619012.4	NP_004436.2
ENST00000652003.1	MANE_select
ENST00000359396.9	MANE_select
ENST00000436401.1	non canonical conserved
ENST00000663094.1	Assembled from SLRseq reads (SRP049776)
ENST00000265310.6	MANE_select
ENST00000409607.5	MANE_select
ENST00000409607.5	upstream ATG
ENST00000355265.7	MANE_select
ENST00000494148.1	NMD likely if extended
ENST00000291009.4	MANE_select
ENST00000446620.1	MANE_select
ENST00000408947.4	MANE_select
ENST00000624211.1	confirm experimentally
ENST00000409500.7	NP_001137152.1
ENST00000443571.6	NP_001137153.1
ENST00000358406.10	MANE_select
ENST00000479303.1	NP_001137151.1
ENST00000473649.1	FLJ37944
ENST00000446192.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000409102.5	alternative 5' UTR
ENST00000409244.5	alternative 5' UTR
ENST00000409541.5	alternative 5' UTR
ENST00000410004.1	alternative 5' UTR
ENST00000359333.8	MANE_select
ENST00000310447.10	MANE_select
ENST00000343257.7	MANE_select
ENST00000443739.7	FLJ42566
ENST00000443739.7	MANE_select
ENST00000409346.5	alternative 5' UTR
ENST00000409408.5	alternative 5' UTR
ENST00000322764.10	MANE_select
ENST00000457235.5	alternative 5' UTR
ENST00000275815.4	MANE_select
ENST00000332690.1	MANE_select
ENST00000408916.1	MANE_select
ENST00000439431.3	ENA ID EGAS00001001486
ENST00000420911.2	MANE_select
ENST00000420911.2	not best-in-genome evidence
ENST00000643242.1	alternative 5' UTR
ENST00000470691.2	LR annotation
ENST00000470691.2	MANE_select
ENST00000649502.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000479870.6	MANE_select
ENST00000460532.5	alternative 5' UTR
ENST00000491908.1	alternative 5' UTR
ENST00000478172.1	alternative 5' UTR
ENST00000485416.1	alternative 5' UTR
ENST00000641412.1	LOF variant in other haplotypes
ENST00000641412.1	MANE_select
ENST00000641412.1	alternative 5' UTR
ENST00000641412.1	dlogan
ENST00000641986.1	ENA ID EGAS00001001486
ENST00000624504.1	LOF variant in other haplotypes
ENST00000641698.1	ENA ID EGAS00001001486
ENST00000641698.1	alternative 5' UTR
ENST00000641693.1	ENA ID EGAS00001001486
ENST00000641693.1	MANE_select
ENST00000641779.1	ENA ID EGAS00001001486
ENST00000641663.1	ENA ID EGAS00001001486
ENST00000641663.1	MANE_select
ENST00000641663.1	alternative 5' UTR
ENST00000641441.1	ENA ID EGAS00001001486
ENST00000641441.1	alternative 5' UTR
ENST00000641592.1	ENA ID EGAS00001001486
ENST00000641592.1	MANE_select
ENST00000641592.1	alternative 5' UTR
ENST00000641068.1	MANE_select
ENST00000641068.1	NCBI GEO ID GSE80249
ENST00000641068.1	alternative 5' UTR
ENST00000641249.1	NCBI GEO ID GSE80249
ENST00000378115.3	MANE_select
ENST00000378115.3	QC splicing correct
ENST00000650250.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000663681.1	Assembled from SLRseq reads (SRP049776)
ENST00000641810.1	ENA ID EGAS00001001486
ENST00000641810.1	MANE_select
ENST00000641121.1	ENA ID EGAS00001001486
ENST00000641841.1	ENA ID EGAS00001001486
ENST00000641841.1	MANE_select
ENST00000641841.1	NCBI GEO ID GSE80249
ENST00000641841.1	alternative 3' UTR
ENST00000641566.1	ENA ID EGAS00001001486
ENST00000641044.2	ENA ID EGAS00001001486
ENST00000641044.2	MANE_select
ENST00000056217.10	MANE_select
ENST00000471847.2	confirm experimentally
ENST00000483238.5	confirm experimentally
ENST00000467773.1	MANE_select
ENST00000467773.1	confirm experimentally
ENST00000482940.5	alternative 5' UTR
ENST00000360057.7	MANE_select
ENST00000552881.1	alternative 5' UTR
ENST00000489798.5	alternative 5' UTR
ENST00000546806.1	alternative 5' UTR
ENST00000662872.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000623696.1	confirm experimentally
ENST00000625365.2	alternative 5' UTR
ENST00000361727.8	CAGE supported TSS
ENST00000361727.8	LR annotation
ENST00000361727.8	MANE_select
ENST00000628930.2	CAGE supported TSS
ENST00000463592.3	CAGE supported TSS
ENST00000636399.1	non canonical other
ENST00000637240.1	non canonical TEC
ENST00000660070.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000307003.3	MANE_select
ENST00000610085.1	CAGE supported TSS
ENST00000662716.1	alternative 5' UTR
ENST00000665936.1	alternative 5' UTR
ENST00000663044.1	alternative 5' UTR
ENST00000602748.5	alternative 3' UTR
ENST00000325222.9	LR annotation
ENST00000325222.9	MANE_select
ENST00000325222.9	alternative 5' UTR
ENST00000320356.7	MANE_select
ENST00000320356.7	NP_004447.2
ENST00000478654.5	alternative 5' UTR
ENST00000350995.6	NP_694543.1
ENST00000652332.1	MANE_select
ENST00000491431.2	MANE_select
ENST00000378061.7	MANE_select
ENST00000426851.6	alternative 5' UTR
ENST00000475153.6	MANE_select
ENST00000483892.5	QC splicing correct
ENST00000491174.1	alternative 5' UTR
ENST00000610704.5	MANE_select
ENST00000335870.7	MANE_select
ENST00000434415.6	MANE_select
ENST00000247930.5	MANE_select
ENST00000486744.3	alternative 5' UTR
ENST00000497895.5	alternative 5' UTR
ENST00000302017.4	MANE_select
ENST00000488835.5	QC splicing correct
ENST00000461331.5	QC splicing correct
ENST00000465639.5	non canonical polymorphism
ENST00000472850.3	non canonical polymorphism
ENST00000223210.5	MANE_select
ENST00000649866.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000464683.5	CAGE supported TSS
ENST00000479613.5	CAGE supported TSS
ENST00000606024.5	CAGE supported TSS
ENST00000464662.5	CAGE supported TSS
ENST00000464662.5	alternative 3' UTR
ENST00000425642.2	CAGE supported TSS
ENST00000623150.1	confirm experimentally
ENST00000665116.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663788.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662318.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668040.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658636.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668562.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655967.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667397.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660975.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669999.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000495144.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000495144.2	QC splicing correct
ENST00000653061.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670266.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653977.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659144.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655742.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663310.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659501.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668432.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667040.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668935.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663223.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656368.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656296.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668792.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000493400.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666892.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653035.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664046.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670616.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670350.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666469.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653791.1	Assembled from SLRseq reads (SRP049776)
ENST00000477367.1	alternative 5' UTR
ENST00000323078.7	alternative 5' UTR
ENST00000493307.1	QC splicing correct
ENST00000493307.1	alternative 5' UTR
ENST00000359623.9	MANE_select
ENST00000647589.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000223271.8	MANE_select
ENST00000466675.5	alternative 5' UTR
ENST00000482669.1	alternative 5' UTR
ENST00000519397.1	alternative 5' UTR
ENST00000475514.5	QC splicing correct
ENST00000488943.1	QC splicing correct
ENST00000518514.1	alternative 5' UTR
ENST00000486714.2	QC splicing correct
ENST00000478789.5	alternative 5' UTR
ENST00000329630.10	MANE_select
ENST00000490973.1	alternative 5' UTR
ENST00000498682.3	NMD exception
ENST00000307271.4	MANE_select
ENST00000313543.5	MANE_select
ENST00000255945.4	MANE_select
ENST00000479232.1	alternative 5' UTR
ENST00000328902.9	MANE_select
ENST00000328902.9	NP_078987.3
ENST00000223293.10	MANE_select
ENST00000307194.6	MANE_select
ENST00000498181.6	alternative 5' UTR
ENST00000358647.5	MANE_select
ENST00000479556.1	Genoscope mRNA only
ENST00000492607.5	alternative 5' UTR
ENST00000429904.6	alternative 5' UTR
ENST00000326442.10	MANE_select
ENST00000326442.10	alternative 5' UTR
ENST00000484928.5	alternative 5' UTR
ENST00000004103.8	MANE_select
ENST00000468689.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000468689.2	ID: align_id:1370771|asmbl_90674
ENST00000468689.2	pacbio_capture_seq_hsTestes : m150419_234711_42137_c100793212550000001823172010081513_s1_p0_10808_ccs ; pacbio_capture_seq_hsLiver : m150426_134437_42137_c100813572550000001823175210081506_s1_p0_82275_ccs, m150426_092122_42137_c100813572550000001823175210081505_s1_p0_19753_ccs, m150413_021447_42137_c100785502550000001823156308111544_s1_p0_84472_ccs, m150426_134437_42137_c100813572550000001823175210081506_s1_p0_10075_ccs ;
ENST00000493429.5	alternative 5' UTR
ENST00000467291.5	alternative 5' UTR
ENST00000460213.1	alternative 5' UTR
ENST00000360937.9	MANE_select
ENST00000483043.1	alternative 5' UTR
ENST00000330883.9	LR annotation
ENST00000262186.10	LR annotation
ENST00000262186.10	MANE_select
ENST00000297494.8	MANE_select
ENST00000605952.5	non canonical U12
ENST00000617967.4	non canonical U12
ENST00000473409.5	non canonical U12
ENST00000358849.9	MANE_select
ENST00000349064.10	MANE_select
ENST00000485972.6	MANE_select
ENST00000483786.5	alternative 5' UTR
ENST00000485713.5	alternative 5' UTR
ENST00000413384.7	MANE_select
ENST00000490898.5	alternative 5' UTR
ENST00000482950.5	alternative 5' UTR
ENST00000463414.5	alternative 5' UTR
ENST00000488420.1	alternative 5' UTR
ENST00000297532.11	MANE_select
ENST00000392818.7	alternative 5' UTR
ENST00000297533.9	MANE_select
ENST00000462940.1	alternative 5' UTR
ENST00000482202.5	alternative 5' UTR
ENST00000476627.5	alternative 5' UTR
ENST00000488752.5	alternative 5' UTR
ENST00000492838.1	alternative 5' UTR
ENST00000397238.7	MANE_select
ENST00000297537.4	not organism-supported
ENST00000420175.3	MANE_select
ENST00000377867.7	NP_543147
ENST00000615129.4	LOC102723607
ENST00000615129.4	MANE_select
ENST00000222388.6	NP_005683.2
ENST00000287844.7	MANE_select
ENST00000468073.5	alternative 5' UTR
ENST00000441774.1	alternative 5' UTR
ENST00000477252.1	alternative 5' UTR
ENST00000262188.13	MANE_select
ENST00000491651.1	alternative 5' UTR
ENST00000470229.6	alternative 5' UTR
ENST00000483358.5	alternative 5' UTR
ENST00000334493.11	MANE_select
ENST00000337323.3	MANE_select
ENST00000262187.10	MANE_select
ENST00000470370.1	not organism-supported
ENST00000418337.6	CAGE supported TSS
ENST00000287878.9	CAGE supported TSS
ENST00000287878.9	MANE_select
ENST00000492843.6	CAGE supported TSS
ENST00000492843.6	NAGNAG splice site
ENST00000652159.1	alternative 5' UTR
ENST00000476632.2	alternative 5' UTR
ENST00000651378.1	upstream ATG
ENST00000392801.6	CAGE supported TSS
ENST00000652047.1	NAGNAG splice site
ENST00000652707.1	CAGE supported TSS
ENST00000652321.1	NAGNAG splice site
ENST00000431418.6	non canonical polymorphism
ENST00000448366.6	non canonical polymorphism
ENST00000426341.6	non canonical polymorphism
ENST00000416269.6	non canonical polymorphism
ENST00000392800.7	MANE_select
ENST00000414073.6	non canonical polymorphism
ENST00000482845.2	non canonical polymorphism
ENST00000482812.1	alternative 5' UTR
ENST00000430044.7	MANE_select
ENST00000431668.1	alternative 5' UTR
ENST00000446096.5	alternative 5' UTR
ENST00000447778.5	alternative 5' UTR
ENST00000434507.5	alternative 5' UTR
ENST00000419245.5	alternative 5' UTR
ENST00000447796.1	alternative 5' UTR
ENST00000418061.2	NAGNAG splice site
ENST00000262189.11	MANE_select
ENST00000681923.1	NAGNAG splice site
ENST00000681033.1	NAGNAG splice site
ENST00000489110.2	NAGNAG splice site
ENST00000452749.2	NAGNAG splice site
ENST00000680867.1	NAGNAG splice site
ENST00000359321.2	MANE_select
ENST00000256001.13	MANE_select
ENST00000658865.1	Assembled from SLRseq reads (SRP049776)
ENST00000647863.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000664249.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000453187.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663745.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659532.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669043.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670362.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669109.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662626.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657245.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662256.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670171.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666243.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662979.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661522.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661522.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000655449.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667969.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669370.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658753.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671302.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668024.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669159.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660414.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669818.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663904.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669806.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669107.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661082.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653989.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665005.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665909.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658825.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669410.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665256.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670343.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664034.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670691.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000416982.1	QC splicing correct
ENST00000649319.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000665842.1	Assembled from SLRseq reads (SRP049776)
ENST00000377770.8	MANE_select
ENST00000663737.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665169.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668685.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667043.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662813.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665490.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657267.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665052.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662315.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665469.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655983.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425591.1	FLJ46080
ENST00000656477.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451116.1	not best-in-genome evidence
ENST00000671644.1	Assembled from SLRseq reads (SRP049776)
ENST00000661090.1	Assembled from SLRseq reads (SRP049776)
ENST00000656459.1	Assembled from SLRseq reads (SRP049776)
ENST00000411526.6	Assembled from SLRseq reads (SRP049776)
ENST00000657268.1	Assembled from SLRseq reads (SRP049776)
ENST00000662567.1	Assembled from SLRseq reads (SRP049776)
ENST00000449486.1	FLJ32047
ENST00000662713.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000404141.6	MANE_select
ENST00000671665.1	Assembled from SLRseq reads (SRP049776)
ENST00000655797.1	Assembled from SLRseq reads (SRP049776)
ENST00000493904.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000287907.3	FLJ36936
ENST00000287907.3	MANE_select
ENST00000663395.1	Assembled from SLRseq reads (SRP049776)
ENST00000624248.1	confirm experimentally
ENST00000664122.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418523.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660943.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000609974.1	CAGE supported TSS
ENST00000425172.1	alternative 5' UTR
ENST00000340368.9	MANE_select
ENST00000660995.1	Assembled from SLRseq reads (SRP049776)
ENST00000297375.4	MANE_select
ENST00000668710.1	Assembled from SLRseq reads (SRP049776)
ENST00000665551.1	Assembled from SLRseq reads (SRP049776)
ENST00000661828.1	Assembled from SLRseq reads (SRP049776)
ENST00000663632.1	Assembled from SLRseq reads (SRP049776)
ENST00000668772.1	Assembled from SLRseq reads (SRP049776)
ENST00000655408.1	Assembled from SLRseq reads (SRP049776)
ENST00000654860.1	Assembled from SLRseq reads (SRP049776)
ENST00000665863.1	Assembled from SLRseq reads (SRP049776)
ENST00000655870.1	Assembled from SLRseq reads (SRP049776)
ENST00000401878.8	MANE_select
ENST00000401878.8	NP_444271.2
ENST00000297261.7	MANE_select
ENST00000377722.2	FLJ42330
ENST00000436670.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656672.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661405.1	Assembled from SLRseq reads (SRP049776)
ENST00000656928.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661595.1	Assembled from SLRseq reads (SRP049776)
ENST00000656505.1	Assembled from SLRseq reads (SRP049776)
ENST00000447933.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660473.1	Assembled from SLRseq reads (SRP049776)
ENST00000671433.1	Assembled from SLRseq reads (SRP049776)
ENST00000656837.1	Assembled from SLRseq reads (SRP049776)
ENST00000663891.1	Assembled from SLRseq reads (SRP049776)
ENST00000664734.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661282.1	Assembled from SLRseq reads (SRP049776)
ENST00000404282.6	alternative 5' UTR
ENST00000439609.5	alternative 5' UTR
ENST00000317955.10	MANE_select
ENST00000405335.5	alternative 5' UTR
ENST00000670834.1	Assembled from SLRseq reads (SRP049776)
ENST00000353442.10	MANE_select
ENST00000434453.1	Genoscope mRNA only
ENST00000275820.4	MANE_select
ENST00000252971.11	MANE_select
ENST00000474448.1	QC splicing correct
ENST00000348165.10	MANE_select
ENST00000389103.4	Isoform 3 - cDNA Em:BC026241.1 also made as an artifact
ENST00000442017.1	QC splicing correct
ENST00000441561.5	alternative 5' UTR
ENST00000429029.6	Isofrom B
ENST00000262177.9	Isoform A
ENST00000262177.9	MANE_select
ENST00000417758.5	alternative 5' UTR
ENST00000437030.5	alternative 5' UTR
ENST00000412557.5	alternative 5' UTR
ENST00000453383.5	alternative 5' UTR
ENST00000439402.1	alternative 5' UTR
ENST00000669906.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665840.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670480.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663105.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648425.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000389418.9	MANE_select
ENST00000389416.8	NP_570857
ENST00000648371.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000409610.1	FLJ43955
ENST00000649505.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000356309.8	MANE_select
ENST00000409423.5	alternative 5' UTR
ENST00000441982.5	FLJ20311
ENST00000251527.10	KIAA1228
ENST00000275418.13	MANE_select
ENST00000407559.8	MANE_select
ENST00000659764.1	Assembled from SLRseq reads (SRP049776)
ENST00000262178.7	MANE_select
ENST00000377633.7	FLJ16511
ENST00000668389.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000518652.1	alternative 5' UTR
ENST00000320901.4	MANE_select
ENST00000522866.5	non canonical other
ENST00000522866.5	not best-in-genome evidence
ENST00000398612.3	MANE_select
ENST00000398612.3	genebuild_only_MANE
ENST00000523195.5	Assembled from SLRseq reads (SRP049776)
ENST00000668758.1	Assembled from SLRseq reads (SRP049776)
ENST00000662707.1	Assembled from SLRseq reads (SRP049776)
ENST00000658419.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000518240.5	alternative 5' UTR
ENST00000350302.8	MANE_select
ENST00000324079.11	MANE_select
ENST00000262109.8	MANE_select
ENST00000637795.2	CAGE supported TSS
ENST00000637795.2	MANE_select
ENST00000524258.2	alternative 5' UTR
ENST00000519254.2	alternative 5' UTR
ENST00000635751.1	alternative 5' UTR
ENST00000331222.6	MANE_select
ENST00000637156.1	alternative 5' UTR
ENST00000637083.1	alternative 5' UTR
ENST00000637594.1	alternative 5' UTR
ENST00000665209.1	Assembled from SLRseq reads (SRP049776)
ENST00000659375.1	Assembled from SLRseq reads (SRP049776)
ENST00000659092.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000349830.8	MANE_select
ENST00000349830.8	NP_055444.2
ENST00000650061.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000517676.2	Assembled from SLRseq reads (SRP049776)
ENST00000662506.1	Assembled from SLRseq reads (SRP049776)
ENST00000650317.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000320248.4	MANE_select
ENST00000262113.9	MANE_select
ENST00000660212.1	Assembled from SLRseq reads (SRP049776)
ENST00000661057.1	Assembled from SLRseq reads (SRP049776)
ENST00000656311.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000612422.1	NAGNAG splice site
ENST00000654884.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659324.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655416.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666066.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519393.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000517984.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658181.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665048.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671533.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000520842.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654513.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000520570.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664965.1	Assembled from SLRseq reads (SRP049776)
ENST00000655522.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670600.1	Assembled from SLRseq reads (SRP049776)
ENST00000654515.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662575.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656456.1	Assembled from SLRseq reads (SRP049776)
ENST00000667660.1	Assembled from SLRseq reads (SRP049776)
ENST00000635120.2	MANE_select
ENST00000400186.7	QC splicing correct
ENST00000602723.5	QC splicing correct
ENST00000520002.5	QC splicing correct
ENST00000602557.5	QC splicing correct
ENST00000518151.1	QC splicing correct
ENST00000647677.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000666533.1	Assembled from SLRseq reads (SRP049776)
ENST00000653453.1	Assembled from SLRseq reads (SRP049776)
ENST00000647648.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000665227.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653588.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660498.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000344683.10	MANE_select
ENST00000629816.3	MANE_select
ENST00000629816.3	NP_001112359.1
ENST00000670781.1	Assembled from SLRseq reads (SRP049776)
ENST00000662128.1	Assembled from SLRseq reads (SRP049776)
ENST00000661193.1	Assembled from SLRseq reads (SRP049776)
ENST00000662747.1	Assembled from SLRseq reads (SRP049776)
ENST00000671468.1	Assembled from SLRseq reads (SRP049776)
ENST00000655775.1	Assembled from SLRseq reads (SRP049776)
ENST00000659007.1	Assembled from SLRseq reads (SRP049776)
ENST00000527490.2	Assembled from SLRseq reads (SRP049776)
ENST00000659223.1	Assembled from SLRseq reads (SRP049776)
ENST00000670222.1	Assembled from SLRseq reads (SRP049776)
ENST00000285518.11	MANE_select
ENST00000655803.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000618742.3	MANE_select
ENST00000500823.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657010.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655804.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000297439.4	MANE_select
ENST00000297436.3	MANE_select
ENST00000297435.3	MANE_select
ENST00000382692.2	Identical to AF238378.4-001
ENST00000382689.7	Identical to AF233439.7-001
ENST00000327857.7	MANE_select
ENST00000330590.4	MANE_select
ENST00000649959.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000663272.1	Assembled from SLRseq reads (SRP049776)
ENST00000656213.1	Assembled from SLRseq reads (SRP049776)
ENST00000664195.1	Assembled from SLRseq reads (SRP049776)
ENST00000656567.1	Assembled from SLRseq reads (SRP049776)
ENST00000665607.1	Assembled from SLRseq reads (SRP049776)
ENST00000529456.1	CAGE supported TSS
ENST00000653873.1	Assembled from SLRseq reads (SRP049776)
ENST00000670717.1	Assembled from SLRseq reads (SRP049776)
ENST00000529559.1	MANE_select
ENST00000526929.1	MANE_select
ENST00000400156.4	MANE_select
ENST00000318124.3	MANE_select
ENST00000528168.3	confirm experimentally
ENST00000316169.2	MANE_select
ENST00000335510.7	MANE_select
ENST00000355602.3	MANE_select
ENST00000355602.3	NP_001035795
ENST00000533250.1	confirm experimentally
ENST00000528972.1	MANE_select
ENST00000335021.2	MANE_select
ENST00000335186.3	MANE_select
ENST00000314265.3	MANE_select
ENST00000326625.5	not organism-supported
ENST00000314357.4	MANE_select
ENST00000302247.3	MANE_select
ENST00000400120.3	FLJ78400
ENST00000400120.3	MANE_select
ENST00000529252.2	not best-in-genome evidence
ENST00000533615.1	not best-in-genome evidence
ENST00000527080.1	MANE_select
ENST00000530484.1	MANE_select
ENST00000518201.1	QC splicing correct
ENST00000615670.5	MANE_select
ENST00000615670.5	NP_001074295.1
ENST00000615670.5	rs35972623
ENST00000615670.5	rs71217287
ENST00000657139.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519814.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000519814.2	ID: align_id:1371290|asmbl_91193
ENST00000519814.2	pacbio_capture_seq_hsTestes : m150418_022254_42137_c100813522550000001823175210081551_s1_p0_52706_ccs, m150423_230148_42137_c100813372550000001823175210081560_s1_p0_108469_ccs, m150418_110041_42137_c100813522550000001823175210081553_s1_p0_45121_ccs, m150414_162557_42137_c100793412550000001823172010081554_s1_p0_152526_ccs, m150423_230148_42137_c100813372550000001823175210081560_s1_p0_124788_ccs ;
ENST00000522661.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652913.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662655.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670256.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664885.1	Assembled from SLRseq reads (SRP049776)
ENST00000519106.2	MANE_select
ENST00000276282.7	MANE_select
ENST00000519292.5	alternative 3' UTR
ENST00000250263.8	CAGE supported TSS
ENST00000250263.8	LR annotation
ENST00000250263.8	MANE_select
ENST00000518663.1	QC splicing correct
ENST00000310455.4	MANE_select
ENST00000519699.1	alternative 5' UTR
ENST00000666082.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649438.1	NAGNAG splice site
ENST00000649018.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662842.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000648215.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000649045.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000648105.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000648790.1	NAGNAG splice site
ENST00000648596.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000649604.1	NAGNAG splice site
ENST00000663885.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000512942.8	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000523747.1	QC splicing correct
ENST00000648507.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658239.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664726.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670837.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670850.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000522765.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669119.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000521842.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000607598.2	CAGE supported TSS
ENST00000310430.11	MANE_select
ENST00000667273.1	Assembled from SLRseq reads (SRP049776)
ENST00000667251.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667251.1	Assembled from SLRseq reads (SRP049776)
ENST00000666267.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662006.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665174.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665174.1	Assembled from SLRseq reads (SRP049776)
ENST00000653424.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653424.1	Assembled from SLRseq reads (SRP049776)
ENST00000519461.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519461.2	Assembled from SLRseq reads (SRP049776)
ENST00000656078.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654192.1	Assembled from SLRseq reads (SRP049776)
ENST00000669913.1	Assembled from SLRseq reads (SRP049776)
ENST00000521863.1	not organism-supported
ENST00000521242.1	not organism-supported
ENST00000661494.1	Assembled from SLRseq reads (SRP049776)
ENST00000659604.1	Assembled from SLRseq reads (SRP049776)
ENST00000317173.9	MANE_select
ENST00000649481.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648351.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000562242.1	confirm experimentally
ENST00000658549.1	Assembled from SLRseq reads (SRP049776)
ENST00000653879.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668412.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671169.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649853.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000521149.2	NMD likely if extended
ENST00000328655.8	MANE_select
ENST00000382483.4	MANE_select
ENST00000304519.10	MANE_select
ENST00000521818.1	not organism-supported
ENST00000304501.2	MANE_select
ENST00000657150.1	Assembled from SLRseq reads (SRP049776)
ENST00000314787.8	MANE_select
ENST00000655622.1	Assembled from SLRseq reads (SRP049776)
ENST00000522026.2	Assembled from SLRseq reads (SRP049776)
ENST00000416569.3	MANE_select
ENST00000221086.8	MANE_select
ENST00000382435.5	MANE_select
ENST00000655944.1	Assembled from SLRseq reads (SRP049776)
ENST00000284486.9	MANE_select
ENST00000534308.1	alternative 5' UTR
ENST00000528897.1	alternative 5' UTR
ENST00000648766.1	CAGE supported TSS
ENST00000531804.5	alternative 5' UTR
ENST00000259089.9	MANE_select
ENST00000653131.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652958.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655780.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661938.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653416.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000532059.6	CAGE supported TSS
ENST00000532059.6	MANE_select
ENST00000335135.8	NAGNAG splice site
ENST00000528027.1	alternative 5' UTR
ENST00000436750.7	alternative 5' UTR
ENST00000455213.6	alternative 5' UTR
ENST00000528323.5	NP_001129220
ENST00000284503.7	MANE_select
ENST00000530337.5	alternative 5' UTR
ENST00000220584.9	MANE_select
ENST00000525900.5	alternative 5' UTR
ENST00000530664.5	alternative 5' UTR
ENST00000676952.1	alternative 5' UTR
ENST00000676825.1	alternative 5' UTR
ENST00000526481.7	alternative 3' UTR
ENST00000353047.11	MANE_select
ENST00000353047.11	QC splicing correct
ENST00000677650.1	alternative 5' UTR
ENST00000676691.1	alternative 5' UTR
ENST00000677873.1	alternative 5' UTR
ENST00000679128.1	alternative 5' UTR
ENST00000678092.1	alternative 5' UTR
ENST00000677671.1	alternative 5' UTR
ENST00000678242.1	alternative 5' UTR
ENST00000677366.1	alternative 5' UTR
ENST00000530640.7	alternative 3' UTR
ENST00000677418.1	alternative 5' UTR
ENST00000531089.6	alternative 3' UTR
ENST00000531089.6	alternative 5' UTR
ENST00000678145.1	alternative 5' UTR
ENST00000678929.1	alternative 5' UTR
ENST00000677819.1	alternative 5' UTR
ENST00000677415.1	alternative 5' UTR
ENST00000678357.1	alternative 5' UTR
ENST00000676755.1	alternative 5' UTR
ENST00000679051.1	alternative 5' UTR
ENST00000453527.7	NAGNAG splice site
ENST00000679140.1	alternative 5' UTR
ENST00000524654.2	alternative 5' UTR
ENST00000533455.6	alternative 5' UTR
ENST00000677082.1	alternative 5' UTR
ENST00000534382.6	alternative 5' UTR
ENST00000534510.6	alternative 5' UTR
ENST00000531502.6	alternative 5' UTR
ENST00000533572.6	alternative 5' UTR
ENST00000345125.8	alternative 5' UTR
ENST00000526645.6	alternative 5' UTR
ENST00000532392.2	alternative 5' UTR
ENST00000505496.7	alternative 5' UTR
ENST00000676843.1	alternative 5' UTR
ENST00000524500.6	alternative 5' UTR
ENST00000528965.2	alternative 5' UTR
ENST00000527215.7	alternative 5' UTR
ENST00000532656.7	alternative 5' UTR
ENST00000526195.6	QC splicing correct
ENST00000526195.6	alternative 5' UTR
ENST00000678615.1	alternative 5' UTR
ENST00000530296.6	alternative 5' UTR
ENST00000527243.6	alternative 5' UTR
ENST00000641994.1	ENA ID EGAS00001001486
ENST00000666643.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655829.1	Assembled from SLRseq reads (SRP049776)
ENST00000382209.2	MANE_select
ENST00000437818.1	MANE_select
ENST00000654985.1	Assembled from SLRseq reads (SRP049776)
ENST00000653725.1	Assembled from SLRseq reads (SRP049776)
ENST00000434078.3	not best-in-genome evidence
ENST00000666566.1	Assembled from SLRseq reads (SRP049776)
ENST00000670188.1	Assembled from SLRseq reads (SRP049776)
ENST00000653269.1	Assembled from SLRseq reads (SRP049776)
ENST00000653408.1	Assembled from SLRseq reads (SRP049776)
ENST00000665207.1	Assembled from SLRseq reads (SRP049776)
ENST00000666028.1	Assembled from SLRseq reads (SRP049776)
ENST00000653486.1	Assembled from SLRseq reads (SRP049776)
ENST00000669660.1	Assembled from SLRseq reads (SRP049776)
ENST00000658322.1	Assembled from SLRseq reads (SRP049776)
ENST00000656282.1	Assembled from SLRseq reads (SRP049776)
ENST00000530447.5	MANE_select
ENST00000530447.5	confirm experimentally
ENST00000530447.5	not best-in-genome evidence
ENST00000529146.6	QC splicing correct
ENST00000340537.9	QC splicing correct
ENST00000431227.7	QC splicing correct
ENST00000534187.6	QC splicing correct
ENST00000533852.6	QC splicing correct
ENST00000533852.6	alternative 3' UTR
ENST00000400079.1	MANE_select
ENST00000660816.1	Assembled from SLRseq reads (SRP049776)
ENST00000398246.8	MANE_select
ENST00000533751.5	QC splicing correct
ENST00000524591.7	MANE_select
ENST00000400069.7	alternative 5' UTR
ENST00000400069.7	upstream ATG
ENST00000400069.7	upstream uORF
ENST00000528753.2	alternative 5' UTR
ENST00000528753.2	upstream uORF
ENST00000532376.2	alternative 5' UTR
ENST00000532376.2	upstream ATG
ENST00000532376.2	upstream uORF
ENST00000276297.9	MANE_select
ENST00000512044.6	alternative 5' UTR
ENST00000529018.1	not organism-supported
ENST00000662638.1	Assembled from SLRseq reads (SRP049776)
ENST00000660986.1	Assembled from SLRseq reads (SRP049776)
ENST00000297324.5	MANE_select
ENST00000668622.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000382080.6	MANE_select
ENST00000527110.2	Assembled from SLRseq reads (SRP049776)
ENST00000503731.6	MANE_select
ENST00000664439.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000262101.10	MANE_select
ENST00000518960.5	alternative 5' UTR
ENST00000649038.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000180166.6	MANE_select
ENST00000318063.10	MANE_select
ENST00000262096.13	MANE_select
ENST00000361272.9	MANE_select
ENST00000524358.5	alternative 5' UTR
ENST00000520178.3	alternative 5' UTR
ENST00000324849.9	MANE_select
ENST00000180173.10	MANE_select
ENST00000494857.6	MANE_select
ENST00000522656.5	alternative 5' UTR
ENST00000470360.5	P52569-2
ENST00000623309.1	confirm experimentally
ENST00000624786.1	confirm experimentally
ENST00000623580.1	confirm experimentally
ENST00000624433.1	not best-in-genome evidence
ENST00000673645.1	alternative 5' UTR
ENST00000251630.11	CAGE supported TSS
ENST00000251630.11	MANE_select
ENST00000660331.1	Assembled from SLRseq reads (SRP049776)
ENST00000653384.1	Assembled from SLRseq reads (SRP049776)
ENST00000650624.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000522444.5	alternative 5' UTR
ENST00000427924.5	MANE_select
ENST00000427924.5	genebuild_only_MANE
ENST00000518650.5	alternative 5' UTR
ENST00000667767.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519038.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000523055.5	alternative 5' UTR
ENST00000637790.2	CAGE supported TSS
ENST00000637790.2	MANE_select
ENST00000637790.2	isoform a
ENST00000636009.1	alternative 3' UTR
ENST00000520781.6	CAGE supported TSS
ENST00000381733.9	isoform b
ENST00000636691.1	CAGE supported TSS
ENST00000636691.1	alternative 5' UTR
ENST00000637528.1	CAGE supported TSS
ENST00000637922.1	CAGE supported TSS
ENST00000637922.1	alternative 5' UTR
ENST00000636171.1	CAGE supported TSS
ENST00000637244.1	alternative 3' UTR
ENST00000636577.1	CAGE supported TSS
ENST00000637636.1	CAGE supported TSS
ENST00000637013.1	alternative 3' UTR
ENST00000637484.1	alternative 3' UTR
ENST00000636128.1	CAGE supported TSS
ENST00000635944.1	alternative 3' UTR
ENST00000636997.1	CAGE supported TSS
ENST00000636815.1	CAGE supported TSS
ENST00000314146.10	NP_001120977
ENST00000519468.5	CAGE supported TSS
ENST00000637718.1	CAGE supported TSS
ENST00000637603.1	CAGE supported TSS
ENST00000636823.1	CAGE supported TSS
ENST00000636823.1	alternative 5' UTR
ENST00000635769.1	CAGE supported TSS
ENST00000637202.1	alternative 3' UTR
ENST00000637561.1	CAGE supported TSS
ENST00000637872.1	CAGE supported TSS
ENST00000637872.1	alternative 5' UTR
ENST00000636269.1	CAGE supported TSS
ENST00000637946.1	alternative 3' UTR
ENST00000665050.1	Assembled from SLRseq reads (SRP049776)
ENST00000521775.6	Assembled from SLRseq reads (SRP049776)
ENST00000649327.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000671237.1	Assembled from SLRseq reads (SRP049776)
ENST00000659561.1	Assembled from SLRseq reads (SRP049776)
ENST00000307719.9	MANE_select
ENST00000518029.5	alternative 5' UTR
ENST00000517492.5	alternative 5' UTR
ENST00000520546.1	alternative 5' UTR
ENST00000660285.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648666.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000286479.4	MANE_select
ENST00000327040.13	MANE_select
ENST00000521878.1	not organism-supported
ENST00000654435.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660401.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658536.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653066.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667134.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000518324.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000265807.8	MANE_select
ENST00000519207.5	alternative 5' UTR
ENST00000454498.6	alternative 5' UTR
ENST00000522854.5	alternative 5' UTR
ENST00000519222.5	alternative 5' UTR
ENST00000523262.5	alternative 5' UTR
ENST00000517494.1	alternative 5' UTR
ENST00000520003.5	alternative 5' UTR
ENST00000524213.5	alternative 5' UTR
ENST00000397977.8	MANE_select
ENST00000523869.1	not organism-supported
ENST00000520670.1	not organism-supported
ENST00000520827.1	non canonical TEC
ENST00000524029.5	alternative 5' UTR
ENST00000522701.5	alternative 5' UTR
ENST00000650287.1	LR annotation
ENST00000650287.1	MANE_select
ENST00000519197.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000519197.2	ID: align_id:1371736|asmbl_91639
ENST00000519197.2	pacbio_capture_seq_hsTestes : m150420_040706_42137_c100793212550000001823172010081514_s1_p0_80371_ccs, m150311_194828_42137_c100761072550000001823160007221535_s1_p0_51042_ccs, m150416_181001_42137_c100793272550000001823172010081557_s1_p0_78450_ccs, m150425_010119_42137_c100813372550000001823175210081566_s1_p0_97388_ccs, m150418_193825_42137_c100813522550000001823175210081555_s1_p0_74417_ccs, m150410_201228_42137_c100785822550000001823156308111530_s1_p0_18195_ccs, m150413_063411_42137_c100785502550000001823156308111545_s1_p0_132274_ccs, m150412_215609_42137_c100785502550000001823156308111543_s1_p0_48658_ccs, m150311_152915_42137_c100761072550000001823160007221534_s1_p0_116893_ccs, m150419_000022_42137_c100813522550000001823175210081556_s1_p0_68953_ccs, m150426_050209_42137_c100813572550000001823175210081504_s1_p0_114852_ccs, m150415_115530_42137_c100793272550000001823172010081550_s1_p0_104852_ccs, m150426_004256_42137_c100813572550000001823175210081503_s1_p0_114676_ccs, m150414_204510_42137_c100793412550000001823172010081555_s1_p0_19470_ccs, m150419_150609_42137_c100793212550000001823172010081511_s1_p0_108656_ccs, m150418_064109_42137_c100813522550000001823175210081552_s1_p0_148151_ccs, m150415_203101_42137_c100793272550000001823172010081552_s1_p0_158659_ccs, m150311_152915_42137_c100761072550000001823160007221534_s1_p0_65046_ccs, m150426_050209_42137_c100813572550000001823175210081504_s1_p0_149633_ccs ; pacbio_capture_seq_hsUndeter : m150415_115530_42137_c100793272550000001823172010081550_s1_p0_29422_ccs, m150411_221032_42137_c100785822550000001823156308111536_s1_p0_10307_ccs ; pacbio_capture_seq_hsHeart : m150415_161148_42137_c100793272550000001823172010081551_s1_p0_67839_ccs ;
ENST00000265808.11	alternative 5' UTR
ENST00000276373.10	MANE_select
ENST00000519026.5	alternative 5' UTR
ENST00000276390.7	MANE_select
ENST00000381569.5	MANE_select
ENST00000656970.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656390.1	Assembled from SLRseq reads (SRP049776)
ENST00000667250.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662185.1	Assembled from SLRseq reads (SRP049776)
ENST00000662848.1	Assembled from SLRseq reads (SRP049776)
ENST00000657283.1	Assembled from SLRseq reads (SRP049776)
ENST00000659453.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655445.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657734.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656144.1	Assembled from SLRseq reads (SRP049776)
ENST00000523852.5	non canonical polymorphism
ENST00000523035.1	non canonical polymorphism
ENST00000653516.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656273.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657661.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668301.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660502.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668628.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657153.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666963.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660936.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663309.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666587.1	Assembled from SLRseq reads (SRP049776)
ENST00000660933.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519996.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000524240.6	MANE_select
ENST00000306793.4	not organism-supported
ENST00000517328.5	alternative 5' UTR
ENST00000522071.2	alternative 5' UTR
ENST00000520676.1	not organism-supported
ENST00000276420.9	MANE_select
ENST00000252512.14	MANE_select
ENST00000518017.1	alternative 5' UTR
ENST00000520125.5	alternative 5' UTR
ENST00000521157.5	alternative 5' UTR
ENST00000518119.6	MANE_select
ENST00000518119.6	alternative 5' UTR
ENST00000522813.5	alternative 5' UTR
ENST00000289820.10	alternative 5' UTR
ENST00000359441.4	MANE_select
ENST00000522148.5	alternative 5' UTR
ENST00000519850.5	alternative 5' UTR
ENST00000523782.6	alternative 5' UTR
ENST00000523623.5	alternative 5' UTR
ENST00000520174.5	alternative 5' UTR
ENST00000517804.5	alternative 5' UTR
ENST00000517418.5	alternative 5' UTR
ENST00000523266.5	alternative 5' UTR
ENST00000289921.8	MANE_select
ENST00000611621.2	MANE_select
ENST00000381418.9	CAGE supported TSS
ENST00000381418.9	MANE_select
ENST00000312841.9	Based on:
ENST00000312841.9	cDNA or EST evidences are absent
ENST00000306306.8	MANE_select
ENST00000306317.7	MANE_select
ENST00000679463.1	MANE_select
ENST00000520626.6	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000520626.6	ID: align_id:3747664|asmbl_237829
ENST00000520626.6	SLR-seq_HsBN_lib8 : HsBN_lib8:Read_243021-Barcode=BC301:length=4297, HsBN_lib8:Read_318133-Barcode=BC099:length=527 ; SLR-seq_TB0000032 : TB0000032-DNA_A01-LRAAD-01:Read_402656-Barcode=BC337:length=625, TB0000032-DNA_A01-LRAAD-01:Read_402729-Barcode=BC337:length=785, TB0000032-DNA_A01-LRAAD-01:Read_298510-Barcode=BC086:length=1211 ; SLR-seq_TB0000034 : TB0000034-DNA_A01-LRAAD-01:Read_418003-Barcode=BC352:length=945, TB0000034-DNA_A01-LRAAD-01:Read_211983-Barcode=BC305:length=2407, TB0000034-DNA_A01-LRAAD-01:Read_418028-Barcode=BC352:length=954 ; SLR-seq_HsBN_lib6 : HsBN_lib6:Read_451312-Barcode=BC023:length=989, HsBN_lib6:Read_450981-Barcode=BC023:length=716, HsBN_lib6:Read_325572-Barcode=BC010:length=720, HsBN_lib6:Read_451048-Barcode=BC023:length=944, HsBN_lib6:Read_451286-Barcode=BC023:length=967, HsBN_lib6:Read_180633-Barcode=BC112:length=2195, HsBN_lib6:Read_9517-Barcode=BC261:length=4332 ; SLR-seq_HsBN_lib11 : HsBN_lib11:Read_475028-Barcode=BC138:length=1177 ; SLR-seq_TB0000035 : TB0000035-DNA_A01-LRAAD-01:Read_370267-Barcode=BC267:length=696, TB0000035-DNA_A01-LRAAD-01:Read_281026-Barcode=BC044:length=684, TB0000035-DNA_A01-LRAAD-01:Read_270641-Barcode=BC019:length=540, TB0000035-DNA_A01-LRAAD-01:Read_12630-Barcode=BC019:length=1696 ;
ENST00000306385.10	MANE_select
ENST00000619681.1	confirm experimentally
ENST00000647689.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000454243.7	MANE_select
ENST00000321613.7	alternative 5' UTR
ENST00000306433.9	MANE_select
ENST00000306433.9	alternative 5' UTR
ENST00000356766.11	MANE_select
ENST00000454009.6	alternative 5' UTR
ENST00000520644.1	alternative 5' UTR
ENST00000381237.6	MANE_select
ENST00000289952.9	alternative 5' UTR
ENST00000524285.1	alternative 5' UTR
ENST00000522881.2	alternative 5' UTR
ENST00000240139.10	MANE_select
ENST00000668235.1	Assembled from SLRseq reads (SRP049776)
ENST00000664810.1	Assembled from SLRseq reads (SRP049776)
ENST00000662002.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000523965.5	CAGE supported TSS
ENST00000522721.1	CAGE supported TSS
ENST00000656016.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456545.5	alternative 5' UTR
ENST00000452226.5	CAGE supported TSS
ENST00000452226.5	alternative 5' UTR
ENST00000397760.8	CAGE supported TSS
ENST00000397761.6	CAGE supported TSS
ENST00000397761.6	alternative 5' UTR
ENST00000616289.1	alternative 5' UTR
ENST00000436754.5	alternative 5' UTR
ENST00000426493.5	alternative 5' UTR
ENST00000429812.5	alternative 5' UTR
ENST00000464275.5	CAGE supported TSS
ENST00000614502.4	CAGE supported TSS
ENST00000443561.3	CAGE supported TSS
ENST00000450780.6	CAGE supported TSS
ENST00000430850.6	CAGE supported TSS
ENST00000289989.10	MANE_select
ENST00000521301.5	alternative 5' UTR
ENST00000389279.7	alternative 5' UTR
ENST00000521837.5	alternative 5' UTR
ENST00000523349.5	alternative 5' UTR
ENST00000276416.11	MANE_select
ENST00000317216.3	MANE_select
ENST00000519492.1	not organism-supported
ENST00000665743.1	Assembled from SLRseq reads (SRP049776)
ENST00000256404.8	MANE_select
ENST00000665917.1	Assembled from SLRseq reads (SRP049776)
ENST00000524077.5	alternative 5' UTR
ENST00000251822.7	MANE_select
ENST00000276431.9	MANE_select
ENST00000397703.6	CAGE supported TSS
ENST00000397703.6	confirm experimentally
ENST00000356864.4	MANE_select
ENST00000356864.4	upstream_ATG-40
ENST00000312584.4	MANE_select
ENST00000221132.8	MANE_select
ENST00000670072.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000397677.6	MANE_select
ENST00000625275.3	alternative 5' UTR
ENST00000265806.12	MANE_select
ENST00000519952.6	alternative 5' UTR
ENST00000518840.6	alternative 5' UTR
ENST00000521588.4	alternative 5' UTR
ENST00000389131.8	MANE_select
ENST00000518083.5	alternative 5' UTR
ENST00000524168.1	alternative 5' UTR
ENST00000519243.1	alternative 5' UTR
ENST00000358689.9	MANE_select
ENST00000668387.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519973.6	MANE_select
ENST00000523930.1	QC splicing correct
ENST00000380871.5	MANE_select
ENST00000325017.4	MANE_select
ENST00000325017.4	confirm experimentally
ENST00000523874.1	QC splicing correct
ENST00000662066.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000290271.7	MANE_select
ENST00000521681.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000265769.9	MANE_select
ENST00000175238.10	MANE_select
ENST00000671216.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519893.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000523467.1	QC splicing correct
ENST00000221166.10	MANE_select
ENST00000521540.1	not organism-supported
ENST00000433454.3	NP_001099011
ENST00000610854.2	MANE_select
ENST00000670816.1	Assembled from SLRseq reads (SRP049776)
ENST00000653303.1	Assembled from SLRseq reads (SRP049776)
ENST00000659475.1	Assembled from SLRseq reads (SRP049776)
ENST00000653519.1	Assembled from SLRseq reads (SRP049776)
ENST00000276440.12	MANE_select
ENST00000276440.12	NP_079216.4
ENST00000421054.7	MANE_select
ENST00000421054.7	alternative 5' UTR
ENST00000221200.9	MANE_select
ENST00000330560.8	MANE_select
ENST00000330560.8	NP_689775
ENST00000521098.2	QC splicing correct
ENST00000670669.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661049.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668871.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654668.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671214.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662780.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654566.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656984.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657953.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649347.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000520164.6	MANE_select
ENST00000380737.8	LR annotation
ENST00000380737.8	MANE_select
ENST00000665949.1	261826
ENST00000650042.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000380629.7	MANE_select
ENST00000520409.5	alternative 5' UTR
ENST00000518611.5	alternative 5' UTR
ENST00000522362.7	MANE_select
ENST00000522362.7	NP_009188
ENST00000521913.7	CAGE supported TSS
ENST00000521913.7	MANE_select
ENST00000521913.7	alternative 5' UTR
ENST00000523027.1	alternative 5' UTR
ENST00000380586.5	NP_150646
ENST00000519096.5	alternative 5' UTR
ENST00000521711.5	QC splicing correct
ENST00000380573.4	MANE_select
ENST00000380573.4	alternative 5' UTR
ENST00000521408.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000305364.9	MANE_select
ENST00000397501.5	alternative 5' UTR
ENST00000519650.5	alternative 5' UTR
ENST00000346049.10	MANE_select
ENST00000522517.5	alternative 5' UTR
ENST00000412793.5	alternative 5' UTR
ENST00000407991.3	MANE_select
ENST00000524096.5	alternative 5' UTR
ENST00000518712.5	alternative 5' UTR
ENST00000521921.5	alternative 5' UTR
ENST00000520208.1	alternative 5' UTR
ENST00000518328.5	alternative 5' UTR
ENST00000521400.6	MANE_select
ENST00000380476.7	alternative 5' UTR
ENST00000316403.15	MANE_select
ENST00000523500.5	alternative 5' UTR
ENST00000523589.5	alternative 5' UTR
ENST00000520796.5	alternative 5' UTR
ENST00000519742.5	alternative 5' UTR
ENST00000520491.5	alternative 5' UTR
ENST00000522413.5	alternative 5' UTR
ENST00000519472.5	alternative 5' UTR
ENST00000519472.5	first 62 bp of ESTs hasn't found
ENST00000523396.1	alternative 5' UTR
ENST00000522238.1	alternative 5' UTR
ENST00000337221.8	NP_878185.1
ENST00000301904.4	MANE_select
ENST00000521510.2	Assembled from SLRseq reads (SRP049776)
ENST00000356537.9	MANE_select
ENST00000523566.5	alternative 5' UTR
ENST00000305188.13	MANE_select
ENST00000519637.1	alternative 5' UTR
ENST00000301905.9	MANE_select
ENST00000522944.5	alternative 5' UTR
ENST00000354914.8	MANE_select
ENST00000413272.7	MANE_select
ENST00000520270.5	alternative 5' UTR
ENST00000521570.5	alternative 5' UTR
ENST00000256398.13	MANE_select
ENST00000521099.1	alternative 5' UTR
ENST00000518479.5	alternative 5' UTR
ENST00000301908.8	MANE_select
ENST00000344423.10	MANE_select
ENST00000520535.1	not organism-supported
ENST00000523202.5	alternative 5' UTR
ENST00000523095.5	alternative 5' UTR
ENST00000521912.1	alternative 5' UTR
ENST00000520290.5	alternative 5' UTR
ENST00000521185.5	alternative 5' UTR
ENST00000522795.1	alternative 5' UTR
ENST00000517459.1	alternative 5' UTR
ENST00000380254.7	MANE_select
ENST00000666189.1	Assembled from SLRseq reads (SRP049776)
ENST00000240093.8	MANE_select
ENST00000523546.1	alternative 5' UTR
ENST00000517911.1	QC splicing correct
ENST00000220562.9	MANE_select
ENST00000664346.1	Assembled from SLRseq reads (SRP049776)
ENST00000656705.1	Assembled from RACEseq reads
ENST00000501224.3	non canonical polymorphism
ENST00000659934.1	Assembled from SLRseq reads (SRP049776)
ENST00000523789.2	non canonical polymorphism
ENST00000521022.6	MANE_select
ENST00000520184.1	alternative 5' UTR
ENST00000520055.1	QC splicing correct
ENST00000648646.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000519662.5	alternative 5' UTR
ENST00000558662.5	NAGNAG splice site
ENST00000287701.15	MANE_select
ENST00000287701.15	NAGNAG splice site
ENST00000287701.15	alternative 5' UTR
ENST00000523613.5	NAGNAG splice site
ENST00000560599.5	NAGNAG splice site
ENST00000560599.5	QC splicing correct
ENST00000560599.5	alternative exon 8
ENST00000397358.7	NAGNAG splice site
ENST00000519047.5	NAGNAG splice site
ENST00000519047.5	alternative 5' UTR
ENST00000521516.5	NAGNAG splice site
ENST00000355231.9	NAGNAG splice site
ENST00000355231.9	alternative 5' UTR
ENST00000524238.3	NAGNAG splice site
ENST00000518080.2	NMD likely if extended
ENST00000517386.1	NAGNAG splice site
ENST00000561377.1	QC splicing correct
ENST00000524189.6	MANE_select
ENST00000240100.7	MANE_select
ENST00000649422.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000662593.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669943.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670557.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657328.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000521245.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665556.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000256255.11	MANE_select
ENST00000521083.1	NMD likely if extended
ENST00000321250.13	MANE_select
ENST00000650149.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000523116.5	NP_001121680.1
ENST00000320542.4	MANE_select
ENST00000607315.1	CAGE supported TSS
ENST00000221114.8	MANE_select
ENST00000523666.5	QC splicing correct
ENST00000523733.1	QC splicing correct
ENST00000649628.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000664980.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000662163.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000397323.9	MANE_select
ENST00000522708.1	not organism-supported
ENST00000355904.9	MANE_select
ENST00000518599.5	alternative 5' UTR
ENST00000518445.1	alternative 5' UTR
ENST00000517349.2	MANE_select
ENST00000221130.11	LR annotation
ENST00000221130.11	MANE_select
ENST00000265616.10	MANE_select
ENST00000221138.9	MANE_select
ENST00000221138.9	NP_001009552.1
ENST00000520056.1	not organism-supported
ENST00000643185.2	MANE_select
ENST00000523392.1	alternative 5' UTR
ENST00000298139.7	CAGE supported TSS
ENST00000298139.7	LR annotation
ENST00000298139.7	MANE_select
ENST00000655813.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670110.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656443.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000519301.6	QC splicing correct
ENST00000652698.1	CAGE supported TSS
ENST00000652698.1	LR annotation
ENST00000522569.1	CAGE supported TSS
ENST00000522569.1	upstream ATG
ENST00000658131.1	Assembled from SLRseq reads (SRP049776)
ENST00000656776.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657615.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659524.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666042.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664284.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666659.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670899.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657565.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666221.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671310.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665465.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655535.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658837.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000520819.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000327671.10	MANE_select
ENST00000518672.5	alternative 5' UTR
ENST00000431156.7	MANE_select
ENST00000360742.9	alternative 5' UTR
ENST00000523305.1	alternative 5' UTR
ENST00000360128.11	MANE_select
ENST00000256257.2	MANE_select
ENST00000256261.9	MANE_select
ENST00000523956.1	alternative 5' UTR
ENST00000522982.1	alternative 5' UTR
ENST00000523063.5	QC splicing correct
ENST00000517292.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000523336.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671048.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519189.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648617.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000667383.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000404895.7	MANE_select
ENST00000655061.1	Assembled from SLRseq reads (SRP049776)
ENST00000659125.1	Assembled from SLRseq reads (SRP049776)
ENST00000523748.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654426.1	Assembled from SLRseq reads (SRP049776)
ENST00000662333.1	Assembled from SLRseq reads (SRP049776)
ENST00000659919.1	Assembled from SLRseq reads (SRP049776)
ENST00000518181.1	QC splicing correct
ENST00000523342.1	QC splicing correct
ENST00000656455.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651399.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000524132.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663604.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000519451.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000399881.8	MANE_select
ENST00000399881.8	non canonical conserved
ENST00000522372.5	non canonical conserved
ENST00000661295.1	Assembled from SLRseq reads (SRP049776)
ENST00000664078.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655057.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000519738.5	QC splicing correct
ENST00000668286.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665151.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663307.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000522643.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665576.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661112.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669346.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667254.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661933.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662854.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660565.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657913.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000331569.6	MANE_select
ENST00000668531.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000648919.1	CAGE supported TSS
ENST00000648919.1	LR annotation
ENST00000519638.3	CAGE supported TSS
ENST00000519638.3	LR annotation
ENST00000519638.3	MANE_select
ENST00000518586.5	alternative 5' UTR
ENST00000335171.10	alternative 5' UTR
ENST00000521644.5	QC splicing correct
ENST00000521644.5	alternative 5' UTR
ENST00000523107.5	alternative 5' UTR
ENST00000647813.1	NMD likely if extended
ENST00000647813.1	alternative 5' UTR
ENST00000523187.5	alternative 5' UTR
ENST00000328195.8	MANE_select
ENST00000521631.1	aligns to the genomic sequence
ENST00000412232.3	MANE_select
ENST00000412232.3	NP_116166.7
ENST00000220659.11	MANE_select
ENST00000330843.9	MANE_select
ENST00000307599.5	MANE_select
ENST00000647937.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000647937.1	ID: align_id:3748785|asmbl_238950
ENST00000647937.1	SLR-seq_HsBN_lib6 : HsBN_lib6:Read_261418-Barcode=BC162:length=1565 ;
ENST00000345060.5	MANE_select
ENST00000338825.5	MANE_select
ENST00000668779.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000343823.11	MANE_select
ENST00000276449.9	MANE_select
ENST00000311351.9	MANE_select
ENST00000287322.5	MANE_select
ENST00000648284.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000527834.5	alternative 5' UTR
ENST00000397166.7	MANE_select
ENST00000526370.1	NMD likely if extended
ENST00000520272.6	alternative 5' UTR
ENST00000529845.5	(Bos taurus)
ENST00000526071.1	(Bos taurus)
ENST00000424479.7	Isoform 1
ENST00000424479.7	MANE_select
ENST00000419686.2	NP_001096030.1
ENST00000317025.13	MANE_select
ENST00000529223.1	alternative 5' UTR
ENST00000534155.1	alternative 5' UTR
ENST00000534539.1	alternative 5' UTR
ENST00000607047.1	CAGE supported TSS
ENST00000527334.5	alternative 5' UTR
ENST00000297720.9	NP_653253.1
ENST00000379957.9	MANE_select
ENST00000518883.6	alternative 5' UTR
ENST00000526356.1	alternative 5' UTR
ENST00000649678.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000397091.9	non canonical conserved
ENST00000397091.9	non-canonical splice donor site between exons 9 and 10
ENST00000447712.7	MANE_select
ENST00000447712.7	non canonical conserved
ENST00000532791.5	alternative 5' UTR
ENST00000397113.6	alternative 5' UTR
ENST00000397113.6	non canonical conserved
ENST00000397113.6	non-canonical splice donor site between exons 9 and 10
ENST00000356207.9	non canonical conserved
ENST00000356207.9	non-canonical splice donor site between exons 8 and 9
ENST00000326324.10	non canonical conserved
ENST00000526570.5	non canonical conserved
ENST00000397103.5	non canonical conserved
ENST00000397108.8	alternative 5' UTR
ENST00000397108.8	non canonical conserved
ENST00000397108.8	non-canonical splice donor site between exons 10 and 11
ENST00000487647.5	non canonical conserved
ENST00000487647.5	non-canonical splice donor site between exons 8 and 9
ENST00000466021.5	non canonical conserved
ENST00000466021.5	non-canonical splice donor site between exons 2 and 3
ENST00000527745.3	non canonical conserved
ENST00000527203.5	NMD likely if extended
ENST00000525001.5	alternative 5' UTR
ENST00000526742.5	alternative 5' UTR
ENST00000529552.5	alternative 5' UTR
ENST00000530568.5	alternative 5' UTR
ENST00000434187.5	alternative 5' UTR
ENST00000440174.1	alternative 5' UTR
ENST00000649111.1	CAGE supported TSS
ENST00000659341.1	Assembled from SLRseq reads (SRP049776)
ENST00000658344.1	Assembled from SLRseq reads (SRP049776)
ENST00000671108.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670774.1	Assembled from SLRseq reads (SRP049776)
ENST00000524354.5	alternative 5' UTR
ENST00000317827.9	MANE_select
ENST00000521528.6	QC splicing correct
ENST00000521528.6	alternative 5' UTR
ENST00000520973.5	alternative 5' UTR
ENST00000521935.5	alternative 5' UTR
ENST00000524193.1	alternative 5' UTR
ENST00000616927.4	QC splicing correct
ENST00000519640.5	QC splicing correct
ENST00000519640.5	alternative 5' UTR
ENST00000617275.5	MANE_select
ENST00000616834.1	QC splicing correct
ENST00000302495.5	MANE_select
ENST00000456845.6	alternative 5' UTR
ENST00000456397.7	MANE_select
ENST00000522142.1	alternative 5' UTR
ENST00000517872.1	alternative 5' UTR
ENST00000520152.1	alternative 5' UTR
ENST00000678474.1	upstream uORF
ENST00000676765.1	CAGE supported TSS
ENST00000676617.1	align_id:3749142|asmbl_239307
ENST00000677137.1	align_id:3749141|asmbl_239306
ENST00000678540.1	align_id:3749149|asmbl_239314
ENST00000677359.1	align_id:3749135|asmbl_239300
ENST00000679268.1	align_id:3749151|asmbl_239316
ENST00000676936.1	align_id:3749102|asmbl_239267
ENST00000676936.1	long_read_pipeline_2
ENST00000677908.1	long_read_pipeline_2
ENST00000677004.1	long_read_pipeline_2
ENST00000677165.1	align_id:3749118|asmbl_239283
ENST00000481058.2	align_id:3749101|asmbl_239266
ENST00000678730.1	align_id:3749094|asmbl_239259
ENST00000678253.1	align_id:3749148|asmbl_239313
ENST00000487273.7	MANE_select
ENST00000678863.1	CAGE supported TSS
ENST00000484143.2	align_id:3749129|asmbl_239294
ENST00000379907.9	MANE_select
ENST00000522506.5	QC splicing correct
ENST00000497806.5	QC splicing correct
ENST00000474764.6	QC splicing correct
ENST00000265707.10	MANE_select
ENST00000265708.9	MANE_select
ENST00000518804.5	alternative 5' UTR
ENST00000519154.5	alternative 5' UTR
ENST00000522495.5	alternative 5' UTR
ENST00000522840.1	alternative 5' UTR
ENST00000253513.11	QC splicing correct
ENST00000518237.6	MANE_select
ENST00000520185.1	QC splicing correct
ENST00000315792.5	MANE_select
ENST00000669842.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654202.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661711.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660702.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000518722.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660362.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000297737.11	MANE_select
ENST00000519406.5	alternative 5' UTR
ENST00000220772.8	MANE_select
ENST00000518270.5	alternative 5' UTR
ENST00000357743.9	MANE_select
ENST00000357743.9	alternative 5' UTR
ENST00000523081.2	Assembled from SLRseq reads (SRP049776)
ENST00000276533.4	MANE_select
ENST00000276533.4	genebuild_only_MANE
ENST00000665362.1	Assembled from SLRseq reads (SRP049776)
ENST00000396987.7	MANE_select
ENST00000519853.5	alternative 5' UTR
ENST00000520223.1	alternative 5' UTR
ENST00000518699.4	MANE_select
ENST00000518699.4	QC splicing correct
ENST00000289734.13	MANE_select
ENST00000265709.13	LR annotation
ENST00000348036.8	NP_065213
ENST00000265713.8	MANE_select
ENST00000396930.4	alternative 5' UTR
ENST00000648335.1	alternative 5' UTR
ENST00000418721.5	FLJ46465
ENST00000485568.5	NP_001292807.1
ENST00000518421.5	alternative 5' UTR
ENST00000396926.8	MANE_select
ENST00000522288.5	alternative 5' UTR
ENST00000517969.1	alternative 5' UTR
ENST00000220809.9	MANE_select
ENST00000678083.1	rgasp_Tho_hum_qbo_solid_GM12878
ENST00000679151.1	CHS.53297.11
ENST00000677722.1	align_id:3749329|asmbl_239494
ENST00000520523.5	alternative 5' UTR
ENST00000521694.1	alternative 5' UTR
ENST00000518213.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000518213.2	QC splicing correct
ENST00000661382.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000521802.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000518994.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000520890.5	QC splicing correct
ENST00000520810.6	CAGE supported TSS
ENST00000520810.6	LR annotation
ENST00000520810.6	MANE_select
ENST00000629753.2	align_id:3749350|asmbl_239515
ENST00000520835.7	upstream ATG
ENST00000416505.7	align_id:3749354|asmbl_239519
ENST00000648136.2	align_id:3749361|asmbl_239526
ENST00000649612.3	align_id:3749363|asmbl_239528
ENST00000676525.1	align_id:3749367|asmbl_239532
ENST00000523599.2	align_id:3749368|asmbl_239533
ENST00000265421.9	MANE_select
ENST00000519771.5	QC splicing correct
ENST00000220812.3	MANE_select
ENST00000520115.5	alternative 5' UTR
ENST00000522069.5	alternative 5' UTR
ENST00000022615.9	MANE_select
ENST00000518495.5	non canonical conserved
ENST00000521158.5	NP_001129166.1
ENST00000522010.1	QC splicing correct
ENST00000520262.6	MANE_select
ENST00000520262.6	alternative 5' UTR
ENST00000520179.5	alternative 5' UTR
ENST00000518717.1	alternative 5' UTR
ENST00000517366.1	alternative 5' UTR
ENST00000522707.1	alternative 5' UTR
ENST00000518384.1	alternative 5' UTR
ENST00000438528.7	alternative 5' UTR
ENST00000417410.7	MANE_select
ENST00000414154.6	alternative 5' UTR
ENST00000416469.6	alternative 5' UTR
ENST00000490331.2	alternative 5' UTR
ENST00000289957.3	MANE_select
ENST00000276410.7	MANE_select
ENST00000254250.7	MANE_select
ENST00000345117.2	NP_945354.1
ENST00000529779.1	not organism-supported
ENST00000669010.1	Assembled from SLRseq reads (SRP049776)
ENST00000527424.6	MANE_select
ENST00000531440.5	alternative 5' UTR
ENST00000524954.1	alternative 5' UTR
ENST00000307602.9	MANE_select
ENST00000302279.8	MANE_select
ENST00000525699.5	QC splicing correct
ENST00000529687.5	NMD exception
ENST00000529687.5	non canonical TEC
ENST00000676193.1	CAGE supported TSS
ENST00000676193.1	SLR-seq_HsBN_lib6
ENST00000676193.1	alternative 5' UTR
ENST00000675509.1	Snaptron_GTEX
ENST00000675509.1	intropolis_filtered
ENST00000676163.1	intropolis_filtered
ENST00000518991.6	alternative 5' UTR
ENST00000518991.6	intropolis_filtered
ENST00000674727.1	SLR-seq_HsBN_lib11
ENST00000674727.1	pacbio_capture_seq
ENST00000331373.10	MANE_select
ENST00000675501.1	intropolis_filtered
ENST00000676356.1	Snaptron_GTEX
ENST00000676356.1	intropolis_filtered
ENST00000675791.1	intropolis_filtered
ENST00000675129.1	alternative 5' UTR
ENST00000675129.1	intropolis_filtered
ENST00000675013.1	intropolis_filtered
ENST00000674820.1	alternative 3' UTR
ENST00000674820.1	intropolis_filtered
ENST00000614426.2	Snaptron_GTEX
ENST00000614426.2	intropolis_filtered
ENST00000674782.1	Snaptron_GTEX
ENST00000674782.1	intropolis_filtered
ENST00000676178.1	intropolis_filtered
ENST00000674937.1	intropolis_filtered
ENST00000675675.1	alternative 3' UTR
ENST00000675675.1	intropolis_filtered
ENST00000675322.1	alternative 3' UTR
ENST00000675322.1	intropolis_filtered
ENST00000674646.1	alternative 3' UTR
ENST00000674646.1	intropolis_filtered
ENST00000674676.1	Snaptron_GTEX
ENST00000674676.1	alternative 3' UTR
ENST00000674676.1	intropolis_filtered
ENST00000379644.9	MANE_select
ENST00000652941.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662072.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669579.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657416.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664124.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656438.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663295.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654290.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667737.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665520.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657159.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664450.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653792.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519008.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668642.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670772.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658758.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657437.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653191.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666038.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670847.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668660.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653482.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661462.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661934.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662050.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664955.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653350.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662731.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665900.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666036.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658134.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660440.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653268.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665463.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659425.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671299.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659649.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661796.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000521715.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000521715.7	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000661775.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668065.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654114.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667272.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667246.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652776.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662711.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000518278.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652884.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664619.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657020.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666272.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655669.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660686.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657336.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654720.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659003.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657592.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653831.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660279.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655710.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659384.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664932.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669635.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653009.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667147.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654936.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668283.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655178.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663826.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667118.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667078.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656186.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000518962.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657676.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669916.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658235.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656283.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658145.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658839.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670517.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655527.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670032.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668263.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664867.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666069.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661199.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653031.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660162.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661882.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666516.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661276.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666661.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660984.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653880.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656924.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656305.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662003.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662230.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654740.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668973.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671529.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670764.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657890.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670515.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664596.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660735.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655218.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671544.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663886.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659041.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670428.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662135.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658631.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663175.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665915.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671268.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671450.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664843.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658902.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668338.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670358.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659403.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661270.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668216.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655128.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654833.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667735.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660234.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665258.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666763.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648949.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000297423.9	MANE_select
ENST00000521918.6	QC splicing correct
ENST00000408965.4	MANE_select
ENST00000314191.7	MANE_select
ENST00000658178.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000518221.5	alternative 5' UTR
ENST00000649973.1	CAGE supported TSS
ENST00000649973.1	LR annotation
ENST00000649973.1	MANE_select
ENST00000649973.1	alternative 5' UTR
ENST00000650327.1	NMD likely if extended
ENST00000518382.1	alternative 5' UTR
ENST00000521261.1	alternative 5' UTR
ENST00000648533.1	NMD likely if extended
ENST00000523111.7	MANE_select
ENST00000520809.1	alternative 5' UTR
ENST00000520595.2	alternative 5' UTR
ENST00000521628.1	alternative 5' UTR
ENST00000521359.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665034.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654201.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657307.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430626.1	FLJ46365
ENST00000523008.5	alternative 3' UTR
ENST00000262103.8	MANE_select
ENST00000522254.5	alternative 3' UTR
ENST00000656475.1	Assembled from SLRseq reads (SRP049776)
ENST00000020945.4	CAGE supported TSS
ENST00000020945.4	LR annotation
ENST00000020945.4	MANE_select
ENST00000649776.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000396822.6	alternative 5' UTR
ENST00000668879.1	Assembled from SLRseq reads (SRP049776)
ENST00000659800.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000517663.5	QC splicing correct
ENST00000517663.5	alternative 5' UTR
ENST00000522267.6	MANE_select
ENST00000657689.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667939.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662394.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662753.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653491.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655271.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000518222.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519828.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664949.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653806.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670453.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000518864.5	alternative 5' UTR
ENST00000642720.2	LR annotation
ENST00000642720.2	MANE_select
ENST00000523085.5	alternative 5' UTR
ENST00000524004.5	QC splicing correct
ENST00000356297.5	MANE_select
ENST00000360540.9	alternative 5' UTR
ENST00000522514.6	MANE_select
ENST00000656129.1	Assembled from SLRseq reads (SRP049776)
ENST00000518942.2	Assembled from SLRseq reads (SRP049776)
ENST00000520357.1	QC splicing correct
ENST00000517580.5	alternative 5' UTR
ENST00000519118.5	alternative 5' UTR
ENST00000523652.1	QC splicing correct
ENST00000663857.1	Assembled from SLRseq reads (SRP049776)
ENST00000358543.9	MANE_select
ENST00000025008.10	MANE_select
ENST00000521611.1	QC splicing correct
ENST00000518468.1	alternative 5' UTR
ENST00000674939.1	MANE_select
ENST00000265572.8	MANE_select
ENST00000520287.5	alternative 5' UTR
ENST00000664678.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655683.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665810.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669494.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667742.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663011.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659344.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654917.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653150.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653150.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000656472.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000521558.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656889.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653042.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654162.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663629.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655800.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658739.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664464.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670087.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664528.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671233.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654138.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000665614.1	Assembled from RACEseq reads
ENST00000656976.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670326.1	Assembled from SLRseq reads (SRP049776)
ENST00000656177.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668269.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665515.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653891.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000359530.7	MANE_select
ENST00000396774.6	alternative 5' UTR
ENST00000524164.5	QC splicing correct
ENST00000521275.5	alternative 5' UTR
ENST00000524234.1	alternative 5' UTR
ENST00000297313.8	MANE_select
ENST00000521604.7	MANE_select
ENST00000565668.2	QC splicing correct
ENST00000316963.8	MANE_select
ENST00000260102.9	MANE_select
ENST00000660715.1	Assembled from SLRseq reads (SRP049776)
ENST00000297316.5	MANE_select
ENST00000220676.2	MANE_select
ENST00000650534.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000671242.1	Assembled from RACEseq reads
ENST00000327381.7	MANE_select
ENST00000668329.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000522470.1	QC splicing correct
ENST00000434581.7	MANE_select
ENST00000522090.5	alternative 5' UTR
ENST00000522030.1	QC splicing correct
ENST00000523423.5	alternative 5' UTR
ENST00000520414.5	alternative 5' UTR
ENST00000522576.5	alternative 5' UTR
ENST00000523180.5	alternative 5' UTR
ENST00000260129.6	MANE_select
ENST00000519728.6	MANE_select
ENST00000520050.1	alternative 5' UTR
ENST00000518552.2	QC splicing correct
ENST00000009589.8	MANE_select
ENST00000520627.1	QC splicing correct
ENST00000520627.1	alternative 5' UTR
ENST00000311923.1	MANE_select
ENST00000316981.8	MANE_select
ENST00000316981.8	alternative 5' UTR
ENST00000517636.5	alternative 5' UTR
ENST00000355315.8	MANE_select
ENST00000303749.8	MANE_select
ENST00000517415.1	NAGNAG splice site
ENST00000520589.1	NAGNAG splice site
ENST00000314922.3	alternative 5' UTR
ENST00000451791.7	MANE_select
ENST00000518974.5	alternative 5' UTR
ENST00000523051.5	QC splicing correct
ENST00000662661.1	Assembled from SLRseq reads (SRP049776)
ENST00000671375.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653444.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665904.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657755.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000521215.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657610.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658046.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661064.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000262644.9	MANE_select
ENST00000517461.1	QC splicing correct
ENST00000669200.1	Assembled from SLRseq reads (SRP049776)
ENST00000655105.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519241.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667730.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661856.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659585.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654770.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000521653.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661539.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668087.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657454.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655011.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000521663.2	Assembled from SLRseq reads (SRP049776)
ENST00000669544.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658180.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659558.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653264.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000521446.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652798.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669970.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671616.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660663.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661599.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670906.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663364.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658027.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670298.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660714.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660714.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000653045.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661411.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657997.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653844.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661537.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654585.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653093.1	Assembled from SLRseq reads (SRP049776)
ENST00000668402.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650579.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000668111.1	Assembled from SLRseq reads (SRP049776)
ENST00000664154.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664574.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664574.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000671135.1	Assembled from SLRseq reads (SRP049776)
ENST00000660882.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659840.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656665.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665297.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666783.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661901.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663859.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663338.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670856.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658857.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000523886.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669557.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655715.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000399598.7	MANE_select
ENST00000301645.4	MANE_select
ENST00000522243.5	QC splicing correct
ENST00000413219.6	alternative 5' UTR
ENST00000260130.9	MANE_select
ENST00000038176.8	MANE_select
ENST00000649465.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000427130.6	NP_001138244.1
ENST00000361421.2	MANE_select
ENST00000665670.1	Assembled from SLRseq reads (SRP049776)
ENST00000662685.1	Assembled from SLRseq reads (SRP049776)
ENST00000666426.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000521456.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653946.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666736.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668218.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667798.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667689.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662814.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665094.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655001.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658762.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655977.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000531077.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663371.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661258.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658208.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665744.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670524.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000317995.5	MANE_select
ENST00000530725.6	Assembled from SLRseq reads (SRP049776)
ENST00000664011.1	Assembled from SLRseq reads (SRP049776)
ENST00000670404.1	Assembled from SLRseq reads (SRP049776)
ENST00000656414.1	Assembled from SLRseq reads (SRP049776)
ENST00000656656.1	Assembled from SLRseq reads (SRP049776)
ENST00000531654.1	not organism-supported
ENST00000262646.12	MANE_select
ENST00000647777.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000423902.7	LR annotation
ENST00000423902.7	MANE_select
ENST00000423902.7	QC splicing correct
ENST00000526846.1	alternative 5' UTR
ENST00000525508.1	confirm experimentally
ENST00000668199.1	Assembled from SLRseq reads (SRP049776)
ENST00000658608.1	Assembled from SLRseq reads (SRP049776)
ENST00000522621.1	alternative 5' UTR
ENST00000519846.5	alternative 5' UTR
ENST00000325897.5	MANE_select
ENST00000523868.2	alternative 5' UTR
ENST00000524095.5	alternative 5' UTR
ENST00000520712.1	alternative 5' UTR
ENST00000379454.9	MANE_select
ENST00000356457.9	NP_115855.1
ENST00000389204.8	NP_064549
ENST00000522603.5	NP_115856.1
ENST00000649904.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000623646.3	MANE_select
ENST00000623646.3	QC splicing correct
ENST00000523211.5	NMD exception
ENST00000658903.1	Assembled from SLRseq reads (SRP049776)
ENST00000260118.7	MANE_select
ENST00000521556.1	QC splicing correct
ENST00000521138.1	QC splicing correct
ENST00000260116.5	MANE_select
ENST00000539294.6	MANE_select
ENST00000621413.4	NP_001264743
ENST00000612880.4	alternative 5' UTR
ENST00000617952.4	alternative 5' UTR
ENST00000619337.4	alternative 5' UTR
ENST00000621890.4	NP_001264744
ENST00000621890.4	QC splicing correct
ENST00000613853.4	alternative 5' UTR
ENST00000621820.4	alternative 5' UTR
ENST00000521221.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000522265.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658341.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666401.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000522740.1	not organism-supported
ENST00000653676.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655858.1	Assembled from SLRseq reads (SRP049776)
ENST00000662470.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668525.1	Assembled from SLRseq reads (SRP049776)
ENST00000648669.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000668083.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665620.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657758.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657758.1	Assembled from SLRseq reads (SRP049776)
ENST00000653366.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657029.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665390.1	Assembled from SLRseq reads (SRP049776)
ENST00000521441.2	Assembled from SLRseq reads (SRP049776)
ENST00000671254.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657723.1	Assembled from SLRseq reads (SRP049776)
ENST00000671640.1	Assembled from SLRseq reads (SRP049776)
ENST00000658332.1	Assembled from SLRseq reads (SRP049776)
ENST00000663091.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662512.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670034.1	Assembled from SLRseq reads (SRP049776)
ENST00000658391.1	Assembled from SLRseq reads (SRP049776)
ENST00000665275.1	Assembled from SLRseq reads (SRP049776)
ENST00000321870.3	MANE_select
ENST00000310193.4	MANE_select
ENST00000665380.1	Assembled from SLRseq reads (SRP049776)
ENST00000650029.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000520902.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000520902.2	Assembled from SLRseq reads (SRP049776)
ENST00000276569.8	MANE_select
ENST00000518908.5	alternative 5' UTR
ENST00000519352.1	alternative 5' UTR
ENST00000262146.9	MANE_select
ENST00000527553.1	QC splicing correct
ENST00000401827.8	MANE_select
ENST00000523253.1	alternative 5' UTR
ENST00000276570.10	MANE_select
ENST00000671118.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659894.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660814.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655427.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652875.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653437.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663048.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000315962.9	MANE_select
ENST00000276571.5	MANE_select
ENST00000518412.1	QC splicing correct
ENST00000517689.1	QC splicing correct
ENST00000659008.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000320270.4	MANE_select
ENST00000648156.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000276576.11	FLJ32430
ENST00000396623.8	MANE_select
ENST00000450307.7	QC splicing correct
ENST00000305454.8	MANE_select
ENST00000310421.5	MANE_select
ENST00000521198.7	MANE_select
ENST00000521198.7	QC splicing correct
ENST00000521198.7	alternative 5' UTR
ENST00000522398.5	QC splicing correct
ENST00000522398.5	alternative 5' UTR
ENST00000396592.7	NP_001129633.1
ENST00000422365.7	MANE_select
ENST00000422365.7	NP_775789.3
ENST00000313616.5	NP_001129632.1
ENST00000563496.2	MANE_select
ENST00000357849.9	MANE_select
ENST00000675306.2	NP_001350062.1
ENST00000262210.11	NP_001351798.1
ENST00000675869.1	NP_001350061.1
ENST00000675820.1	alternative 5' UTR
ENST00000674993.1	Transcript supported by Swiss-Prot isoform Q1MSJ5-3.4
ENST00000674993.1	confirm experimentally
ENST00000675955.1	NP_001350060.1
ENST00000676882.1	NP_001351799.1
ENST00000678616.1	CAGE supported TSS
ENST00000678616.1	MANE_select
ENST00000679112.1	alternative 3' UTR
ENST00000519668.1	CAGE supported TSS
ENST00000262215.8	MANE_select
ENST00000519436.1	alternative 5' UTR
ENST00000663110.1	Assembled from RACEseq reads
ENST00000607397.1	CAGE supported TSS
ENST00000297770.10	MANE_select
ENST00000638254.1	alternative 3' UTR
ENST00000288368.5	MANE_select
ENST00000660308.1	Assembled from SLRseq reads (SRP049776)
ENST00000653063.1	Assembled from SLRseq reads (SRP049776)
ENST00000656279.1	Assembled from SLRseq reads (SRP049776)
ENST00000653785.1	Assembled from SLRseq reads (SRP049776)
ENST00000659689.1	Assembled from SLRseq reads (SRP049776)
ENST00000512294.7	Assembled from SLRseq reads (SRP049776)
ENST00000666602.1	Assembled from SLRseq reads (SRP049776)
ENST00000656712.1	Assembled from SLRseq reads (SRP049776)
ENST00000659515.1	Assembled from SLRseq reads (SRP049776)
ENST00000584858.3	Assembled from SLRseq reads (SRP049776)
ENST00000518698.6	MANE_select
ENST00000667126.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662535.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657605.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665853.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670857.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669481.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519062.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000517925.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663971.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662861.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663915.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663873.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000524286.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657671.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664220.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653348.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000517343.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666807.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666807.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000659866.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519557.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000525061.5	alternative 5' UTR
ENST00000529134.5	alternative 5' UTR
ENST00000419716.7	alternative 5' UTR
ENST00000402687.9	MANE_select
ENST00000402687.9	alternative 5' UTR
ENST00000534179.5	alternative 5' UTR
ENST00000528783.5	alternative 5' UTR
ENST00000525999.5	alternative 5' UTR
ENST00000260126.9	MANE_select
ENST00000533300.1	QC splicing correct
ENST00000276594.3	MANE_select
ENST00000426346.1	alternative 5' UTR
ENST00000452400.7	MANE_select
ENST00000519724.1	alternative 5' UTR
ENST00000520416.1	alternative 5' UTR
ENST00000654135.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000262213.7	MANE_select
ENST00000521049.5	QC splicing correct
ENST00000522447.5	alternative 3' UTR
ENST00000276590.5	MANE_select
ENST00000408926.8	MANE_select
ENST00000520030.5	alternative 5' UTR
ENST00000519350.1	alternative 5' UTR
ENST00000647843.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000647843.1	ID: align_id:3751329|asmbl_241494
ENST00000647843.1	SLR-seq_HsBN_lib12 : HsBN_lib12:Read_273635-Barcode=BC340:length=2602 ;
ENST00000666052.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000388742.8	alternative 5' UTR
ENST00000340726.8	LR annotation
ENST00000340726.8	MANE_select
ENST00000303824.11	NAGNAG splice site
ENST00000645793.1	alternative 5' UTR
ENST00000647540.1	alternative 5' UTR
ENST00000644229.1	alternative 5' UTR
ENST00000644712.1	NAGNAG splice site
ENST00000388741.7	upstream uORF
ENST00000645451.1	NAGNAG splice site
ENST00000655314.1	Assembled from SLRseq reads (SRP049776)
ENST00000457356.9	Assembled from SLRseq reads (SRP049776)
ENST00000653074.1	Assembled from SLRseq reads (SRP049776)
ENST00000656742.1	Assembled from SLRseq reads (SRP049776)
ENST00000519751.6	Assembled from SLRseq reads (SRP049776)
ENST00000670333.1	Assembled from SLRseq reads (SRP049776)
ENST00000325509.5	MANE_select
ENST00000262209.5	MANE_select
ENST00000523207.2	MANE_select
ENST00000678358.1	align_id:3751362|asmbl_241527
ENST00000679115.1	align_id:3751358|asmbl_241523
ENST00000517390.2	align_id:3751360|asmbl_241525
ENST00000522018.2	align_id:3751363|asmbl_241528
ENST00000677031.1	align_id:3751359|asmbl_241524
ENST00000678997.1	align_id:3751353|asmbl_241518
ENST00000678518.1	align_id:3751350|asmbl_241515
ENST00000676483.1	align_id:3751355|asmbl_241520
ENST00000276603.10	MANE_select
ENST00000678912.1	align_id:3751356|asmbl_241521
ENST00000297354.7	MANE_select
ENST00000624510.3	LOC100130301
ENST00000352983.7	MANE_select
ENST00000396467.5	alternative 5' UTR
ENST00000396466.5	QC splicing correct
ENST00000396466.5	alternative 5' UTR
ENST00000435330.5	alternative 5' UTR
ENST00000431653.1	alternative 5' UTR
ENST00000240285.10	MANE_select
ENST00000661600.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668246.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660616.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660616.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000666935.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000522560.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663657.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670418.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665205.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000524300.6	MANE_select
ENST00000524300.6	rs949493
ENST00000355780.9	alternative 5' UTR
ENST00000521451.5	rs949493
ENST00000521447.5	alternative 5' UTR
ENST00000521736.5	alternative 5' UTR
ENST00000602593.6	CAGE supported TSS
ENST00000602593.6	MANE_select
ENST00000602840.5	QC splicing correct
ENST00000602840.5	alternative 5' UTR
ENST00000520242.6	MANE_select
ENST00000519487.5	alternative 5' UTR
ENST00000284811.12	alternative 5' UTR
ENST00000522337.5	alternative 5' UTR
ENST00000523815.5	alternative 5' UTR
ENST00000519082.5	alternative 5' UTR
ENST00000312184.6	MANE_select
ENST00000284818.7	MANE_select
ENST00000668834.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670556.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000342232.5	MANE_select
ENST00000675821.1	alternative 5' UTR
ENST00000676377.1	alternative 5' UTR
ENST00000675220.1	NP_001349858.1
ENST00000675220.1	NP_001349861.1
ENST00000674612.1	alternative 5' UTR
ENST00000676143.1	alternative 5' UTR
ENST00000675376.1	CAGE supported TSS
ENST00000675376.1	alternative 5' UTR
ENST00000674806.1	alternative 5' UTR
ENST00000675944.1	alternative 5' UTR
ENST00000675928.1	NP_001349859.1
ENST00000674754.1	alternative 3' UTR
ENST00000674926.1	alternative 3' UTR
ENST00000674944.1	alternative 3' UTR
ENST00000675165.1	NAGNAG splice site
ENST00000220822.12	MANE_select
ENST00000675560.1	alternative 3' UTR
ENST00000676207.1	NP_001349860.1
ENST00000522568.2	alternative 3' UTR
ENST00000674865.1	NP_001035808.1
ENST00000674756.1	alternative 3' UTR
ENST00000675661.1	alternative 3' UTR
ENST00000675007.1	alternative 3' UTR
ENST00000676120.1	alternative 3' UTR
ENST00000675265.1	alternative 3' UTR
ENST00000675474.1	CAGE supported TSS
ENST00000666796.1	Assembled from SLRseq reads (SRP049776)
ENST00000521762.1	QC splicing correct
ENST00000649643.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000260113.7	MANE_select
ENST00000260113.7	alternative 5' UTR
ENST00000262207.9	MANE_select
ENST00000520277.1	QC splicing correct
ENST00000520277.1	alternative 5' UTR
ENST00000670695.1	Extended with: Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670695.1	Extended with: TAGENE_transcript
ENST00000669950.1	Extended with: Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669950.1	Extended with: TAGENE_transcript
ENST00000654852.2	Extended with: Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654852.2	Extended with: TAGENE_transcript
ENST00000396423.4	MANE_select
ENST00000668249.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000666902.1	Assembled from SLRseq reads (SRP049776)
ENST00000669823.1	Assembled from SLRseq reads (SRP049776)
ENST00000518143.2	Assembled from SLRseq reads (SRP049776)
ENST00000663655.1	Assembled from SLRseq reads (SRP049776)
ENST00000522357.2	Assembled from SLRseq reads (SRP049776)
ENST00000523977.2	Assembled from SLRseq reads (SRP049776)
ENST00000663063.1	Assembled from SLRseq reads (SRP049776)
ENST00000517683.1	QC splicing correct
ENST00000651372.2	LR annotation
ENST00000651372.2	MANE_select
ENST00000520307.5	alternative 5' UTR
ENST00000523885.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000517585.1	alternative 5' UTR
ENST00000523809.1	alternative 5' UTR
ENST00000357039.9	MANE_select
ENST00000520103.5	alternative 5' UTR
ENST00000522527.5	alternative 5' UTR
ENST00000518986.5	alternative 5' UTR
ENST00000519956.1	alternative 5' UTR
ENST00000655149.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669183.1	Assembled from SLRseq reads (SRP049776)
ENST00000653339.1	Assembled from SLRseq reads (SRP049776)
ENST00000519242.1	QC splicing correct
ENST00000396418.7	MANE_select
ENST00000352966.9	alternative 5' UTR
ENST00000518467.1	alternative 5' UTR
ENST00000661869.1	Assembled from SLRseq reads (SRP049776)
ENST00000263849.9	MANE_select
ENST00000263851.9	MANE_select
ENST00000649603.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000654804.1	Assembled from SLRseq reads (SRP049776)
ENST00000657404.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000670648.1	Assembled from SLRseq reads (SRP049776)
ENST00000519983.2	Assembled from SLRseq reads (SRP049776)
ENST00000220876.12	MANE_select
ENST00000518491.1	alternative 5' UTR
ENST00000653752.1	Assembled from SLRseq reads (SRP049776)
ENST00000674295.1	Assembled from SLRseq reads (SRP049776)
ENST00000674418.1	Assembled from SLRseq reads (SRP049776)
ENST00000674177.1	Assembled from SLRseq reads (SRP049776)
ENST00000354724.8	MANE_select
ENST00000521111.2	Assembled from SLRseq reads (SRP049776)
ENST00000674439.1	Assembled from SLRseq reads (SRP049776)
ENST00000674358.1	Assembled from SLRseq reads (SRP049776)
ENST00000674160.1	Assembled from SLRseq reads (SRP049776)
ENST00000523531.2	Assembled from SLRseq reads (SRP049776)
ENST00000519075.2	Assembled from SLRseq reads (SRP049776)
ENST00000435063.3	Assembled from SLRseq reads (SRP049776)
ENST00000666705.1	Assembled from SLRseq reads (SRP049776)
ENST00000607754.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659308.1	Assembled from SLRseq reads (SRP049776)
ENST00000669451.1	Assembled from SLRseq reads (SRP049776)
ENST00000649281.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000658547.1	Assembled from SLRseq reads (SRP049776)
ENST00000657657.1	Assembled from SLRseq reads (SRP049776)
ENST00000276585.9	MANE_select
ENST00000521434.5	alternative 5' UTR
ENST00000519120.1	alternative 5' UTR
ENST00000520946.1	alternative 5' UTR
ENST00000518271.1	alternative 5' UTR
ENST00000523319.6	QC splicing correct
ENST00000520035.5	QC splicing correct
ENST00000602950.1	QC splicing correct
ENST00000666374.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656157.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664928.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671387.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658482.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656068.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662936.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662273.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656811.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665946.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430430.5	NP_001099009.1
ENST00000455036.8	MANE_select
ENST00000327835.7	MANE_select
ENST00000519936.1	alternative 5' UTR
ENST00000666058.1	Assembled from SLRseq reads (SRP049776)
ENST00000220597.4	MANE_select
ENST00000668603.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653749.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663184.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669190.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519412.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657588.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667002.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652920.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000297258.11	MANE_select
ENST00000256103.3	MANE_select
ENST00000379071.4	MANE_select
ENST00000256104.5	MANE_select
ENST00000256108.10	MANE_select
ENST00000311489.8	NP_001138351.1
ENST00000449740.6	NP_001138350.1
ENST00000521360.5	alternative 5' UTR
ENST00000522997.5	alternative 5' UTR
ENST00000518568.3	MANE_select
ENST00000220669.10	MANE_select
ENST00000521287.5	alternative 5' UTR
ENST00000520635.5	alternative 5' UTR
ENST00000520604.5	alternative 5' UTR
ENST00000523361.5	alternative 5' UTR
ENST00000517450.5	alternative 5' UTR
ENST00000521742.5	alternative 5' UTR
ENST00000518419.5	alternative 5' UTR
ENST00000520076.5	alternative 5' UTR
ENST00000297265.5	MANE_select
ENST00000524337.1	QC splicing correct
ENST00000353788.8	NP_690050.1
ENST00000345957.9	MANE_select
ENST00000521810.5	alternative 5' UTR
ENST00000519119.5	alternative 5' UTR
ENST00000519817.5	alternative 5' UTR
ENST00000518183.5	alternative 5' UTR
ENST00000521773.5	alternative 5' UTR
ENST00000670794.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668607.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658926.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000660458.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671467.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000647805.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000660951.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000664711.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655672.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661297.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656073.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000534675.1	QC splicing correct
ENST00000663542.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663058.1	Assembled from SLRseq reads (SRP049776)
ENST00000659043.1	Assembled from SLRseq reads (SRP049776)
ENST00000658531.1	Assembled from SLRseq reads (SRP049776)
ENST00000654599.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660350.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667428.1	Assembled from SLRseq reads (SRP049776)
ENST00000666702.1	Assembled from SLRseq reads (SRP049776)
ENST00000522613.5	alternative 5' UTR
ENST00000522455.5	alternative 5' UTR
ENST00000521695.5	alternative 5' UTR
ENST00000521268.6	MANE_select
ENST00000517988.1	alternative 5' UTR
ENST00000522647.1	alternative 5' UTR
ENST00000521376.1	QC splicing correct
ENST00000360375.8	MANE_select
ENST00000416274.7	MANE_select
ENST00000619594.5	MANE_select
ENST00000619594.5	NP_001093140
ENST00000612977.4	alternative 5' UTR
ENST00000612809.4	alternative 5' UTR
ENST00000545322.5	alternative 5' UTR
ENST00000611854.4	alternative 5' UTR
ENST00000615697.4	NAGNAG splice site
ENST00000615697.4	alternative 5' UTR
ENST00000523281.5	alternative 5' UTR
ENST00000521286.1	NAGNAG splice site
ENST00000321764.4	MANE_select
ENST00000523022.6	MANE_select
ENST00000523022.6	alternative 5' UTR
ENST00000517618.5	alternative 5' UTR
ENST00000517590.5	alternative 5' UTR
ENST00000521846.5	alternative 5' UTR
ENST00000522579.5	alternative 5' UTR
ENST00000522814.5	alternative 5' UTR
ENST00000522662.5	alternative 5' UTR
ENST00000523858.5	alternative 5' UTR
ENST00000519129.5	QC splicing correct
ENST00000519129.5	alternative 5' UTR
ENST00000285381.3	MANE_select
ENST00000660227.1	Assembled from SLRseq reads (SRP049776)
ENST00000654303.1	Assembled from SLRseq reads (SRP049776)
ENST00000517697.6	Assembled from SLRseq reads (SRP049776)
ENST00000285379.10	MANE_select
ENST00000655091.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654638.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648211.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000650562.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000656790.1	Assembled from SLRseq reads (SRP049776)
ENST00000521564.1	alternative 5' UTR
ENST00000523635.1	alternative 5' UTR
ENST00000285393.4	MANE_select
ENST00000276616.3	MANE_select
ENST00000297524.8	MANE_select
ENST00000521326.2	Assembled from SLRseq reads (SRP049776)
ENST00000668794.1	Assembled from SLRseq reads (SRP049776)
ENST00000523218.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000517970.6	MANE_select
ENST00000406452.8	MANE_select
ENST00000517490.6	MANE_select
ENST00000621783.4	alternative 5' UTR
ENST00000620393.4	alternative 5' UTR
ENST00000621526.4	alternative 5' UTR
ENST00000621245.4	alternative 5' UTR
ENST00000523469.5	alternative 5' UTR
ENST00000522240.1	alternative 5' UTR
ENST00000320005.6	MANE_select
ENST00000518476.6	MANE_select
ENST00000657849.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000319675.5	MANE_select
ENST00000286614.11	MANE_select
ENST00000658283.1	Assembled from SLRseq reads (SRP049776)
ENST00000667081.1	Assembled from SLRseq reads (SRP049776)
ENST00000658256.1	Assembled from SLRseq reads (SRP049776)
ENST00000665922.1	Assembled from SLRseq reads (SRP049776)
ENST00000670095.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659668.1	Assembled from SLRseq reads (SRP049776)
ENST00000653184.1	Assembled from SLRseq reads (SRP049776)
ENST00000649573.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000668057.1	Assembled from SLRseq reads (SRP049776)
ENST00000661105.1	Assembled from SLRseq reads (SRP049776)
ENST00000658265.1	Assembled from SLRseq reads (SRP049776)
ENST00000519655.6	QC splicing correct
ENST00000656898.1	Assembled from SLRseq reads (SRP049776)
ENST00000653574.1	Assembled from SLRseq reads (SRP049776)
ENST00000658477.1	Assembled from SLRseq reads (SRP049776)
ENST00000521996.2	Assembled from SLRseq reads (SRP049776)
ENST00000669938.1	Assembled from SLRseq reads (SRP049776)
ENST00000655144.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655144.1	Assembled from SLRseq reads (SRP049776)
ENST00000220751.5	MANE_select
ENST00000517696.1	QC splicing correct
ENST00000647849.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000451899.7	MANE_select
ENST00000451899.7	NP_001119583
ENST00000265433.8	MANE_select
ENST00000517772.5	CAGE supported TSS
ENST00000517772.5	alternative 5' UTR
ENST00000517337.1	alternative 5' UTR
ENST00000220764.7	MANE_select
ENST00000521668.1	QC splicing correct
ENST00000265431.7	MANE_select
ENST00000523716.5	alternative 5' UTR
ENST00000520613.5	alternative 5' UTR
ENST00000514406.2	alternative 5' UTR
ENST00000665012.1	Assembled from SLRseq reads (SRP049776)
ENST00000521975.2	Assembled from SLRseq reads (SRP049776)
ENST00000521975.2	QC splicing correct
ENST00000662145.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655523.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000517400.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658342.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663329.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658299.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655219.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662692.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000523406.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667565.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667296.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659030.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654785.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653734.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668745.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668720.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665280.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661519.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671657.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655123.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663098.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666641.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663619.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670903.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654946.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000458549.7	MANE_select
ENST00000521852.5	alternative 5' UTR
ENST00000668846.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000417640.7	MANE_select
ENST00000522820.5	alternative 5' UTR
ENST00000517562.3	MANE_select
ENST00000285419.8	MANE_select
ENST00000522817.2	Assembled from SLRseq reads (SRP049776)
ENST00000657110.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000657110.1	Assembled from SLRseq reads (SRP049776)
ENST00000659792.1	Assembled from SLRseq reads (SRP049776)
ENST00000404789.8	CAGE supported TSS
ENST00000404789.8	MANE_select
ENST00000518304.1	alternative 5' UTR
ENST00000448384.2	not organism-supported
ENST00000522862.5	alternative 5' UTR
ENST00000276609.8	MANE_select
ENST00000276609.8	alternative 5' UTR
ENST00000360348.6	NP_783553
ENST00000422361.6	NP_783554
ENST00000518844.5	alternative 5' UTR
ENST00000518992.5	alternative 5' UTR
ENST00000521054.5	alternative 5' UTR
ENST00000519847.5	alternative 5' UTR
ENST00000517792.5	alternative 5' UTR
ENST00000522467.5	alternative 5' UTR
ENST00000517919.5	alternative 5' UTR
ENST00000521733.5	alternative 5' UTR
ENST00000520556.5	alternative 5' UTR
ENST00000521319.5	alternative 5' UTR
ENST00000520583.5	alternative 5' UTR
ENST00000523168.5	alternative 5' UTR
ENST00000518823.5	alternative 5' UTR
ENST00000518317.5	alternative 5' UTR
ENST00000521375.5	alternative 5' UTR
ENST00000520974.5	alternative 5' UTR
ENST00000518832.1	alternative 5' UTR
ENST00000517493.5	NMD likely if extended
ENST00000518954.5	alternative 5' UTR
ENST00000519061.5	alternative 5' UTR
ENST00000520428.5	alternative 5' UTR
ENST00000521902.5	NMD likely if extended
ENST00000518449.5	alternative 5' UTR
ENST00000518042.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655386.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659155.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648652.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000523284.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653143.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665958.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666810.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660470.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657155.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663356.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668408.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664548.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654419.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000521988.6	MANE_select
ENST00000518748.5	alternative 5' UTR
ENST00000520686.5	alternative 5' UTR
ENST00000520430.5	alternative 5' UTR
ENST00000517858.5	alternative 5' UTR
ENST00000378861.9	alternative 5' UTR
ENST00000524037.5	alternative 5' UTR
ENST00000521617.5	alternative 5' UTR
ENST00000519069.5	alternative 5' UTR
ENST00000524107.5	alternative 5' UTR
ENST00000519969.5	alternative 5' UTR
ENST00000517751.5	alternative 5' UTR
ENST00000522903.5	alternative 5' UTR
ENST00000655285.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000523475.5	QC splicing correct
ENST00000518829.5	QC splicing correct
ENST00000452913.6	QC splicing correct
ENST00000518322.6	MANE_select
ENST00000518322.6	QC splicing correct
ENST00000523577.5	QC splicing correct
ENST00000522803.5	QC splicing correct
ENST00000423990.6	QC splicing correct
ENST00000518116.5	QC splicing correct
ENST00000523453.5	QC splicing correct
ENST00000520955.5	alternative 5' UTR
ENST00000519109.5	alternative 5' UTR
ENST00000518597.1	alternative 5' UTR
ENST00000520560.5	alternative 5' UTR
ENST00000521947.1	alternative 5' UTR
ENST00000498673.5	alternative 5' UTR
ENST00000409623.7	NP_001135773
ENST00000453321.8	MANE_select
ENST00000521517.5	QC splicing correct
ENST00000520614.1	alternative 5' UTR
ENST00000297598.5	MANE_select
ENST00000520728.5	alternative 5' UTR
ENST00000518107.5	alternative 5' UTR
ENST00000518573.1	alternative 5' UTR
ENST00000517764.1	alternative 5' UTR
ENST00000518827.1	alternative 5' UTR
ENST00000521144.1	alternative 5' UTR
ENST00000607097.1	CAGE supported TSS
ENST00000027335.8	MANE_select
ENST00000450165.6	NP_001138135
ENST00000521491.1	alternative 5' UTR
ENST00000297596.3	MANE_select
ENST00000396194.6	NP_859053
ENST00000523433.1	alternative 5' UTR
ENST00000336148.10	MANE_select
ENST00000523839.5	alternative 5' UTR
ENST00000481490.3	MANE_select
ENST00000297591.10	MANE_select
ENST00000658286.1	Assembled from SLRseq reads (SRP049776)
ENST00000657799.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662944.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000670081.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659133.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000562760.1	confirm experimentally
ENST00000433389.8	CAGE supported TSS
ENST00000433389.8	LR annotation
ENST00000433389.8	MANE_select
ENST00000414645.6	MANE_select
ENST00000523731.6	MANE_select
ENST00000308108.9	MANE_select
ENST00000308108.9	align_id:3752783|asmbl_242948
ENST00000523378.5	alternative 5' UTR
ENST00000396113.5	alternative 5' UTR
ENST00000396111.6	NAGNAG splice site
ENST00000396111.6	QC splicing correct
ENST00000396124.9	MANE_select
ENST00000519804.1	alternative 5' UTR
ENST00000448464.6	NP_001129205
ENST00000342697.5	MANE_select
ENST00000655064.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000315367.4	MANE_select
ENST00000519516.1	alternative 5' UTR
ENST00000671532.1	Assembled from SLRseq reads (SRP049776)
ENST00000655917.1	Assembled from SLRseq reads (SRP049776)
ENST00000664790.1	Assembled from SLRseq reads (SRP049776)
ENST00000663556.1	Assembled from SLRseq reads (SRP049776)
ENST00000656091.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656181.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657586.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000286688.6	MANE_select
ENST00000519366.1	not organism-supported
ENST00000287020.7	MANE_select
ENST00000287022.10	MANE_select
ENST00000671278.1	Assembled from SLRseq reads (SRP049776)
ENST00000287025.4	MANE_select
ENST00000517720.1	alternative 5' UTR
ENST00000517309.6	MANE_select
ENST00000522072.1	alternative 5' UTR
ENST00000523862.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000522767.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000518385.5	NAGNAG splice site
ENST00000518385.5	QC splicing correct
ENST00000302190.9	MANE_select
ENST00000522911.5	alternative 5' UTR
ENST00000519914.5	alternative 5' UTR
ENST00000521590.5	alternative 5' UTR
ENST00000523877.1	alternative 5' UTR
ENST00000220763.10	MANE_select
ENST00000519900.1	alternative 5' UTR
ENST00000517742.1	alternative 5' UTR
ENST00000519484.1	alternative 5' UTR
ENST00000521142.1	alternative 5' UTR
ENST00000322128.5	MANE_select
ENST00000659172.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000336273.8	MANE_select
ENST00000521545.7	CAGE supported TSS
ENST00000521545.7	MANE_select
ENST00000521689.5	non canonical conserved
ENST00000254898.7	MANE_select
ENST00000254898.7	genebuild_only_MANE
ENST00000524308.5	non canonical conserved
ENST00000522025.6	QC splicing correct
ENST00000522025.6	non canonical conserved
ENST00000520016.5	non canonical conserved
ENST00000518154.5	non canonical conserved
ENST00000521952.5	non canonical conserved
ENST00000523561.1	non canonical conserved
ENST00000521291.5	alternative 5' UTR
ENST00000287038.8	MANE_select
ENST00000523172.5	QC splicing correct
ENST00000521726.1	alternative 5' UTR
ENST00000517805.1	QC splicing correct
ENST00000501016.2	QC splicing correct
ENST00000318528.8	MANE_select
ENST00000254878.8	MANE_select
ENST00000401707.7	MANE_select
ENST00000522319.5	alternative 5' UTR
ENST00000349693.3	alternative 5' UTR
ENST00000430223.7	MANE_select
ENST00000649151.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000649151.1	ID: align_id:1374623|asmbl_94526
ENST00000649151.1	pacbio_capture_seq_hsTestes : m150411_003207_42137_c100785822550000001823156308111531_s1_p0_103810_ccs ;
ENST00000419617.7	MANE_select
ENST00000519420.1	alternative 5' UTR
ENST00000287042.5	MANE_select
ENST00000521839.1	alternative 5' UTR
ENST00000517397.1	QC splicing correct
ENST00000522510.5	alternative 5' UTR
ENST00000518199.1	alternative 5' UTR
ENST00000664437.1	Assembled from SLRseq reads (SRP049776)
ENST00000661471.1	Assembled from SLRseq reads (SRP049776)
ENST00000653552.1	Assembled from SLRseq reads (SRP049776)
ENST00000663007.1	Assembled from SLRseq reads (SRP049776)
ENST00000664472.1	Assembled from SLRseq reads (SRP049776)
ENST00000355155.5	CCDS6283.1
ENST00000355155.5	NP_056058.2
ENST00000357162.7	MANE_select
ENST00000524330.1	QC splicing correct
ENST00000523226.1	QC splicing correct
ENST00000520468.7	MANE_select
ENST00000297564.6	alternative 5' UTR
ENST00000520271.5	alternative 5' UTR
ENST00000517682.6	QC splicing correct
ENST00000517682.6	alternative 5' UTR
ENST00000524245.5	alternative 5' UTR
ENST00000522940.5	alternative 5' UTR
ENST00000518171.5	BI254944
ENST00000518171.5	BI667068
ENST00000518171.5	alternative 3' UTR
ENST00000662759.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000360863.11	MANE_select
ENST00000519092.5	alternative 5' UTR
ENST00000519408.5	alternative 5' UTR
ENST00000428847.3	MANE_select
ENST00000353107.8	MANE_select
ENST00000388798.7	MANE_select
ENST00000519449.5	alternative 5' UTR
ENST00000341084.7	MANE_select
ENST00000519527.5	alternative 5' UTR
ENST00000523167.1	alternative 5' UTR
ENST00000522369.5	alternative 5' UTR
ENST00000432381.2	alternative 5' UTR
ENST00000523481.5	alternative 5' UTR
ENST00000664475.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519844.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654832.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657736.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656767.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669948.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667762.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665530.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653377.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000335659.7	MANE_select
ENST00000519597.5	alternative 5' UTR
ENST00000520311.5	alternative 5' UTR
ENST00000519316.5	QC splicing correct
ENST00000358990.3	alternative 5' UTR
ENST00000524072.5	alternative 5' UTR
ENST00000523000.5	alternative 5' UTR
ENST00000521345.1	alternative 5' UTR
ENST00000311812.7	MANE_select
ENST00000518293.5	alternative 3' UTR
ENST00000518293.5	not best-in-genome evidence
ENST00000520142.2	alternative 5' UTR
ENST00000521865.6	alternative 5' UTR
ENST00000520804.2	alternative 5' UTR
ENST00000522720.2	alternative 5' UTR
ENST00000520868.5	alternative 3' UTR
ENST00000318607.10	MANE_select
ENST00000517990.5	QC splicing correct
ENST00000522658.6	alternative 3' UTR
ENST00000523555.6	alternative 5' UTR
ENST00000519596.5	QC splicing correct
ENST00000518196.5	alternative 5' UTR
ENST00000521067.1	alternative 5' UTR
ENST00000519363.1	alternative 5' UTR
ENST00000395958.6	MANE_select
ENST00000395958.6	genebuild_only_MANE
ENST00000395956.7	alternative 5' UTR
ENST00000353245.7	alternative 5' UTR
ENST00000522819.5	alternative 5' UTR
ENST00000395953.6	alternative 5' UTR
ENST00000395951.7	alternative 5' UTR
ENST00000419477.6	alternative 5' UTR
ENST00000521328.5	alternative 5' UTR
ENST00000418997.1	alternative 5' UTR
ENST00000437293.5	alternative 5' UTR
ENST00000523131.1	alternative 5' UTR
ENST00000523938.1	alternative 5' UTR
ENST00000665441.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662046.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653963.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656569.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658504.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653983.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000656334.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660508.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000514926.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665627.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655682.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657076.1	Assembled from SLRseq reads (SRP049776)
ENST00000666510.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669613.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000520411.1	Em:AA431609
ENST00000518090.1	DB516632
ENST00000518090.1	DB524701
ENST00000520984.5	alternative 3' UTR
ENST00000311212.9	MANE_select
ENST00000517844.5	alternative 5' UTR
ENST00000520347.5	alternative 5' UTR
ENST00000518336.5	alternative 5' UTR
ENST00000523146.1	not organism-supported
ENST00000523922.1	alternative 5' UTR
ENST00000520454.1	alternative 5' UTR
ENST00000668201.1	Assembled from SLRseq reads (SRP049776)
ENST00000518612.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669605.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000521085.1	alternative 5' UTR
ENST00000646743.1	CAGE supported TSS
ENST00000646743.1	LR annotation
ENST00000646743.1	MANE_select
ENST00000517674.5	NMD likely if extended
ENST00000220931.11	MANE_select
ENST00000220931.11	alternative 5' UTR
ENST00000521599.5	QC splicing correct
ENST00000519508.6	QC splicing correct
ENST00000519508.6	alternative 5' UTR
ENST00000522951.5	QC splicing correct
ENST00000522951.5	alternative 5' UTR
ENST00000518727.5	alternative 5' UTR
ENST00000520425.5	alternative 5' UTR
ENST00000518166.5	alternative 5' UTR
ENST00000522252.5	alternative 5' UTR
ENST00000517822.5	alternative 5' UTR
ENST00000524209.5	alternative 5' UTR
ENST00000517531.5	alternative 5' UTR
ENST00000521964.5	alternative 5' UTR
ENST00000519098.5	alternative 5' UTR
ENST00000523923.5	alternative 5' UTR
ENST00000520346.1	alternative 5' UTR
ENST00000518661.5	alternative 5' UTR
ENST00000522206.5	alternative 5' UTR
ENST00000524137.5	alternative 5' UTR
ENST00000522078.5	alternative 5' UTR
ENST00000523645.5	alternative 5' UTR
ENST00000251810.8	MANE_select
ENST00000520820.2	Assembled from SLRseq reads (SRP049776)
ENST00000667853.1	Assembled from SLRseq reads (SRP049776)
ENST00000520539.6	MANE_select
ENST00000520539.6	NAGNAG splice site
ENST00000519630.1	QC splicing correct
ENST00000659499.1	Assembled from SLRseq reads (SRP049776)
ENST00000285402.4	MANE_select
ENST00000285407.11	MANE_select
ENST00000670970.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663613.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665815.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000337198.10	MANE_select
ENST00000347770.8	alternative 5' UTR
ENST00000522311.1	NMD likely if extended
ENST00000520402.5	alternative 5' UTR
ENST00000518353.5	alternative 5' UTR
ENST00000659614.1	Assembled from SLRseq reads (SRP049776)
ENST00000520750.6	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000520538.2	Assembled from SLRseq reads (SRP049776)
ENST00000518738.2	MANE_select
ENST00000518738.2	alternative 5' UTR
ENST00000521246.1	alternative 5' UTR
ENST00000309982.10	MANE_select
ENST00000521102.2	Assembled from SLRseq reads (SRP049776)
ENST00000663003.1	Assembled from SLRseq reads (SRP049776)
ENST00000660425.1	Assembled from SLRseq reads (SRP049776)
ENST00000523614.6	QC splicing correct
ENST00000667164.1	Assembled from SLRseq reads (SRP049776)
ENST00000653502.1	Assembled from SLRseq reads (SRP049776)
ENST00000523673.2	Assembled from SLRseq reads (SRP049776)
ENST00000669482.1	Assembled from SLRseq reads (SRP049776)
ENST00000523775.1	QC splicing correct
ENST00000358755.5	MANE_select
ENST00000358755.5	genebuild_only_MANE
ENST00000663005.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000330295.10	MANE_select
ENST00000523256.6	QC splicing correct
ENST00000521645.5	QC splicing correct
ENST00000297578.9	MANE_select
ENST00000649416.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000649416.1	ID: align_id:3753559|asmbl_243724
ENST00000649416.1	SLR-seq_HsBN_lib8 : HsBN_lib8:Read_383292-Barcode=BC380:length=1211, HsBN_lib8:Read_283823-Barcode=BC040:length=1679, HsBN_lib8:Read_300052-Barcode=BC145:length=1492, HsBN_lib8:Read_409987-Barcode=BC316:length=546, HsBN_lib8:Read_262656-Barcode=BC103:length=1531, HsBN_lib8:Read_409475-Barcode=BC343:length=947, HsBN_lib8:Read_431525-Barcode=BC248:length=1450, HsBN_lib8:Read_229901-Barcode=BC094:length=1686 ; SLR-seq_HsBN_lib10 : HsBN_lib10:Read_427237-Barcode=BC296:length=914, HsBN_lib10:Read_315898-Barcode=BC113:length=1466, HsBN_lib10:Read_387071-Barcode=BC117:length=1327, HsBN_lib10:Read_292699-Barcode=BC114:length=1253, HsBN_lib10:Read_366865-Barcode=BC100:length=592, HsBN_lib10:Read_55083-Barcode=BC177:length=1565, HsBN_lib10:Read_394012-Barcode=BC048:length=1059, HsBN_lib10:Read_200787-Barcode=BC164:length=1634, HsBN_lib10:Read_479353-Barcode=BC238:length=1397, HsBN_lib10:Read_487508-Barcode=BC339:length=822 ; SLR-seq_HsBN_lib12 : HsBN_lib12:Read_480652-Barcode=BC335:length=1133, HsBN_lib12:Read_172932-Barcode=BC366:length=1861, HsBN_lib12:Read_203484-Barcode=BC018:length=1687, HsBN_lib12:Read_30098-Barcode=BC260:length=1877, HsBN_lib12:Read_190285-Barcode=BC039:length=2091, HsBN_lib12:Read_186544-Barcode=BC324:length=1573 ; SLR-seq_HsBN_lib7 : HsBN_lib7:Read_487765-Barcode=BC056:length=898, HsBN_lib7:Read_456140-Barcode=BC023:length=597, HsBN_lib7:Read_92396-Barcode=BC201:length=2178, HsBN_lib7:Read_499078-Barcode=BC021:length=1499, HsBN_lib7:Read_48246-Barcode=BC143:length=1946 ; SLR-seq_TB0000033 : TB0000033-DNA_A01-LRAAD-01:Read_189807-Barcode=BC283:length=2091, TB0000033-DNA_A01-LRAAD-01:Read_70347-Barcode=BC106:length=2009, TB0000033-DNA_A01-LRAAD-01:Read_317722-Barcode=BC145:length=1212, TB0000033-DNA_A01-LRAAD-01:Read_231047-Barcode=BC342:length=2550, TB0000033-DNA_A01-LRAAD-01:Read_174161-Barcode=BC260:length=1936, TB0000033-DNA_A01-LRAAD-01:Read_211553-Barcode=BC314:length=2357 ; SLR-seq_TB0000032 : TB0000032-DNA_A01-LRAAD-01:Read_8310-Barcode=BC015:length=2103, TB0000032-DNA_A01-LRAAD-01:Read_36874-Barcode=BC055:length=2397, TB0000032-DNA_A01-LRAAD-01:Read_306385-Barcode=BC105:length=912, TB0000032-DNA_A01-LRAAD-01:Read_225189-Barcode=BC329:length=1531, TB0000032-DNA_A01-LRAAD-01:Read_107257-Barcode=BC155:length=2137 ; SLR-seq_TB0000034 : TB0000034-DNA_A01-LRAAD-01:Read_21421-Barcode=BC032:length=1550, TB0000034-DNA_A01-LRAAD-01:Read_378828-Barcode=BC261:length=1228, TB0000034-DNA_A01-LRAAD-01:Read_198329-Barcode=BC286:length=2268, TB0000034-DNA_A01-LRAAD-01:Read_367168-Barcode=BC235:length=792, TB0000034-DNA_A01-LRAAD-01:Read_353689-Barcode=BC204:length=1025, TB0000034-DNA_A01-LRAAD-01:Read_345764-Barcode=BC183:length=1156 ; SLR-seq_HsBN_lib6 : HsBN_lib6:Read_443881-Barcode=BC090:length=1378, HsBN_lib6:Read_455780-Barcode=BC219:length=543 ; SLR-seq_HsBN_lib9 : HsBN_lib9:Read_460375-Barcode=BC213:length=686, HsBN_lib9:Read_409057-Barcode=BC234:length=714, HsBN_lib9:Read_402127-Barcode=BC277:length=941, HsBN_lib9:Read_493637-Barcode=BC321:length=669, HsBN_lib9:Read_486419-Barcode=BC129:length=1367, HsBN_lib9:Read_187100-Barcode=BC281:length=2271 ; SLR-seq_HsBN_lib11 : HsBN_lib11:Read_251685-Barcode=BC369:length=1553, HsBN_lib11:Read_489692-Barcode=BC031:length=828, HsBN_lib11:Read_428903-Barcode=BC015:length=1196, HsBN_lib11:Read_105915-Barcode=BC344:length=1638, HsBN_lib11:Read_403175-Barcode=BC223:length=660, HsBN_lib11:Read_355691-Barcode=BC024:length=815, HsBN_lib11:Read_445271-Barcode=BC181:length=1391, HsBN_lib11:Read_415056-Barcode=BC079:length=1432, HsBN_lib11:Read_172491-Barcode=BC159:length=1719, HsBN_lib11:Read_315762-Barcode=BC096:length=998, HsBN_lib11:Read_334920-Barcode=BC288:length=1461, HsBN_lib11:Read_363830-Barcode=BC012:length=978 ; SLR-seq_TB0000035 : TB0000035-DNA_A01-LRAAD-01:Read_65489-Barcode=BC096:length=2414, TB0000035-DNA_A01-LRAAD-01:Read_240993-Barcode=BC350:length=2132, TB0000035-DNA_A01-LRAAD-01:Read_283022-Barcode=BC049:length=512, TB0000035-DNA_A01-LRAAD-01:Read_272598-Barcode=BC024:length=529 ;
ENST00000521716.1	CAGE supported TSS
ENST00000521971.5	CAGE supported TSS
ENST00000521971.5	QC splicing correct
ENST00000521999.5	CAGE supported TSS
ENST00000612750.5	CAGE supported TSS
ENST00000612750.5	MANE_select
ENST00000519682.5	CAGE supported TSS
ENST00000518554.2	CAGE supported TSS
ENST00000351513.7	MANE_select
ENST00000297581.2	MANE_select
ENST00000276654.10	MANE_select
ENST00000407775.7	MANE_select
ENST00000520027.5	alternative 5' UTR
ENST00000517361.1	alternative 5' UTR
ENST00000647695.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000518932.5	BF572569
ENST00000659633.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000520588.1	QC splicing correct
ENST00000517566.7	CAGE supported TSS
ENST00000517566.7	MANE_select
ENST00000531443.6	NP_060472.2
ENST00000658832.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661818.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000517455.1	QC splicing correct
ENST00000311955.4	MANE_select
ENST00000670718.1	Assembled from SLRseq reads (SRP049776)
ENST00000664876.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000517746.6	MANE_select
ENST00000520734.5	alternative 5' UTR
ENST00000520033.1	alternative 5' UTR
ENST00000657188.1	Assembled from SLRseq reads (SRP049776)
ENST00000665144.1	Assembled from SLRseq reads (SRP049776)
ENST00000517939.5	CAGE supported TSS
ENST00000276659.10	CAGE supported TSS
ENST00000276659.10	LR annotation
ENST00000276659.10	MANE_select
ENST00000521757.1	alternative 5' UTR
ENST00000521956.5	alternative 5' UTR
ENST00000522333.1	alternative 5' UTR
ENST00000677409.1	alternative 5' UTR
ENST00000220849.10	MANE_select
ENST00000678937.1	alternative 5' UTR
ENST00000677084.1	alternative 5' UTR
ENST00000677040.1	alternative 5' UTR
ENST00000678023.1	alternative 5' UTR
ENST00000677614.1	alternative 5' UTR
ENST00000678797.1	alternative 5' UTR
ENST00000679198.1	alternative 5' UTR
ENST00000676663.1	alternative 5' UTR
ENST00000678881.1	alternative 5' UTR
ENST00000518634.1	QC splicing correct
ENST00000220853.8	MANE_select
ENST00000297459.4	MANE_select
ENST00000661381.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656015.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000518632.2	MANE_select
ENST00000518632.2	alternative 5' UTR
ENST00000239690.9	MANE_select
ENST00000678168.1	long_read_pipeline_2
ENST00000521688.6	MANE_select
ENST00000517756.5	QC splicing correct
ENST00000378402.10	MANE_select
ENST00000395785.6	alternative 5' UTR
ENST00000529502.5	NMD candidate
ENST00000337573.10	MANE_select
ENST00000530629.5	alternative 5' UTR
ENST00000534318.5	alternative 5' UTR
ENST00000276646.14	MANE_select
ENST00000424158.6	QC splicing correct
ENST00000424158.6	non canonical TEC
ENST00000446070.6	alternative 5' UTR
ENST00000528647.5	alternative 5' UTR
ENST00000533065.5	alternative 5' UTR
ENST00000533171.5	alternative 5' UTR
ENST00000527707.5	QC splicing correct
ENST00000528045.5	alternative 5' UTR
ENST00000529190.5	alternative 5' UTR
ENST00000528569.5	alternative 5' UTR
ENST00000533821.5	alternative 5' UTR
ENST00000530841.5	alternative 5' UTR
ENST00000531230.5	alternative 5' UTR
ENST00000534501.5	alternative 5' UTR
ENST00000524720.5	alternative 5' UTR
ENST00000534184.5	alternative 5' UTR
ENST00000528716.5	alternative 5' UTR
ENST00000526302.5	alternative 5' UTR
ENST00000534578.5	alternative 5' UTR
ENST00000527600.5	alternative 5' UTR
ENST00000524391.6	MANE_select
ENST00000670392.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658597.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662310.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668858.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671489.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669698.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665803.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658028.1	Assembled from SLRseq reads (SRP049776)
ENST00000664704.1	Assembled from SLRseq reads (SRP049776)
ENST00000661954.1	Assembled from SLRseq reads (SRP049776)
ENST00000661561.1	Assembled from SLRseq reads (SRP049776)
ENST00000658081.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667145.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658119.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669893.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660015.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668956.1	Assembled from SLRseq reads (SRP049776)
ENST00000657323.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657323.1	Assembled from SLRseq reads (SRP049776)
ENST00000663408.1	Assembled from SLRseq reads (SRP049776)
ENST00000653924.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653924.1	Assembled from SLRseq reads (SRP049776)
ENST00000659834.1	Assembled from SLRseq reads (SRP049776)
ENST00000658508.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658733.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658733.1	Assembled from SLRseq reads (SRP049776)
ENST00000669744.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657532.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000523557.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665011.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669997.1	Assembled from RACEseq reads
ENST00000663666.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660667.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668936.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671497.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669352.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653400.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653374.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654293.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655136.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663639.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653848.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000522390.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000517308.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655458.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650619.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000662855.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000297405.10	MANE_select
ENST00000297405.10	NP_937756.1
ENST00000297405.10	signal at the upstream start site
ENST00000455883.2	NP_443132.3
ENST00000668818.1	Assembled from SLRseq reads (SRP049776)
ENST00000653801.1	Assembled from SLRseq reads (SRP049776)
ENST00000667090.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652926.1	Assembled from SLRseq reads (SRP049776)
ENST00000395715.8	MANE_select
ENST00000519076.5	QC splicing correct
ENST00000517323.2	QC splicing correct
ENST00000395713.6	alternative 5' UTR
ENST00000519815.5	alternative 5' UTR
ENST00000422939.1	alternative 5' UTR
ENST00000451156.1	alternative 5' UTR
ENST00000664052.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664052.1	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000669902.1	Assembled from SLRseq reads (SRP049776)
ENST00000521861.6	MANE_select
ENST00000520813.1	alternative 5' UTR
ENST00000309822.7	MANE_select
ENST00000297338.7	MANE_select
ENST00000520992.5	alternative 5' UTR
ENST00000517485.5	alternative 5' UTR
ENST00000523547.1	alternative 5' UTR
ENST00000519837.5	alternative 5' UTR
ENST00000522699.1	alternative 5' UTR
ENST00000378279.4	MANE_select
ENST00000521243.5	alternative 5' UTR
ENST00000519688.5	alternative 5' UTR
ENST00000671266.1	Assembled from SLRseq reads (SRP049776)
ENST00000297347.7	MANE_select
ENST00000378204.7	MANE_select
ENST00000437196.1	QC splicing correct
ENST00000314727.9	5RACE341_AC023590.2-001_from_encode_region_ENr321:_exons_1-1_/_1Single_exon_gene:_only_1_exon_submitted_Spleen
ENST00000314727.9	MANE_select
ENST00000434023.1	QC splicing correct
ENST00000625758.3	Assembled from SLRseq reads (SRP049776)
ENST00000658340.1	Assembled from SLRseq reads (SRP049776)
ENST00000664584.1	Assembled from SLRseq reads (SRP049776)
ENST00000659669.1	Assembled from SLRseq reads (SRP049776)
ENST00000297350.9	MANE_select
ENST00000297350.9	Note that there is a further upstream ATG, approx. 30 AA residues upstream from the current TSS. However, this has relatively poor kozak sequence, but does show conservation amongst other spp
ENST00000332843.3	MANE_select
ENST00000522112.6	alternative 5' UTR
ENST00000614891.5	MANE_select
ENST00000531508.1	alternative 5' UTR
ENST00000655158.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653228.1	Assembled from SLRseq reads (SRP049776)
ENST00000670132.1	Assembled from SLRseq reads (SRP049776)
ENST00000259526.4	MANE_select
ENST00000075322.11	MANE_select
ENST00000378164.7	MANE_select
ENST00000665858.1	Assembled from SLRseq reads (SRP049776)
ENST00000313655.5	MANE_select
ENST00000286234.6	MANE_select
ENST00000574086.1	QC splicing correct
ENST00000297848.8	MANE_select
ENST00000297848.8	NP_066933
ENST00000306185.8	MANE_select
ENST00000305949.6	MANE_select
ENST00000519841.1	QC splicing correct
ENST00000517992.2	MANE_select
ENST00000517992.2	alternative 5' UTR
ENST00000648490.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000519298.1	NMD likely if extended
ENST00000520717.1	alternative 5' UTR
ENST00000517739.1	QC splicing correct
ENST00000303924.5	MANE_select
ENST00000663147.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000522197.2	Assembled from SLRseq reads (SRP049776)
ENST00000656304.1	Assembled from SLRseq reads (SRP049776)
ENST00000520043.1	QC splicing correct
ENST00000458107.3	alternative 3' UTR
ENST00000664717.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647560.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000669984.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656261.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665664.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653591.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671409.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668492.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656543.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662694.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663221.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666599.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664854.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667010.1	Assembled from SLRseq reads (SRP049776)
ENST00000670139.1	Assembled from SLRseq reads (SRP049776)
ENST00000521608.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656927.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663430.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666337.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670473.1	Assembled from SLRseq reads (SRP049776)
ENST00000659897.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666442.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000607710.1	CAGE supported TSS
ENST00000314393.6	MANE_select
ENST00000534247.1	alternative 5' UTR
ENST00000259512.9	MANE_select
ENST00000519018.5	alternative 5' UTR
ENST00000523036.1	alternative 5' UTR
ENST00000520368.5	alternative 5' UTR
ENST00000519418.5	alternative 5' UTR
ENST00000287380.6	MANE_select
ENST00000522420.5	alternative 5' UTR
ENST00000521676.5	QC splicing correct
ENST00000521676.5	alternative 5' UTR
ENST00000518684.1	alternative 5' UTR
ENST00000518805.5	alternative 5' UTR
ENST00000654156.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000523412.1	QC splicing correct
ENST00000661117.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654317.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000276704.6	MANE_select
ENST00000357082.8	NP_001191109.1
ENST00000395571.8	MANE_select
ENST00000395571.8	alternative 5' UTR
ENST00000522655.5	alternative 5' UTR
ENST00000602651.1	alternative 3' UTR
ENST00000522595.5	alternative 5' UTR
ENST00000524267.5	alternative 5' UTR
ENST00000517666.5	QC splicing correct
ENST00000287394.10	MANE_select
ENST00000521903.5	upstream uORF
ENST00000523984.5	alternative 5' UTR
ENST00000287387.7	MANE_select
ENST00000650311.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000517956.5	MANE_select
ENST00000652905.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419625.6	MANE_select
ENST00000334705.12	MANE_select
ENST00000522917.5	MANE_select
ENST00000669903.1	Assembled from SLRseq reads (SRP049776)
ENST00000661827.1	Assembled from SLRseq reads (SRP049776)
ENST00000517482.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660335.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668271.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000297632.8	MANE_select
ENST00000328599.4	MANE_select
ENST00000669597.1	Assembled from SLRseq reads (SRP049776)
ENST00000303545.4	MANE_select
ENST00000276692.11	MANE_select
ENST00000523888.5	alternative 5' UTR
ENST00000518639.1	QC splicing correct
ENST00000276689.8	MANE_select
ENST00000677950.1	NAGNAG splice site
ENST00000676713.1	NAGNAG splice site
ENST00000518547.6	MANE_select
ENST00000664428.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655969.1	Assembled from SLRseq reads (SRP049776)
ENST00000657463.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666508.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669297.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666477.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663195.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657752.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664218.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661165.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000525292.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655637.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663965.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654805.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663940.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660300.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657296.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667269.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658039.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653724.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000529135.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000529478.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000530549.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656062.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656280.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659706.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666745.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662253.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656869.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000532713.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668837.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656616.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664707.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658422.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670566.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670200.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663141.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656339.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658171.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663920.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000533286.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662674.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660517.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655319.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671263.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656467.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665389.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669524.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669524.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667605.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665293.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660004.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670706.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663922.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654275.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663062.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660364.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663231.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662376.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663765.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670950.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656094.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670035.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665263.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657718.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000510897.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659472.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665494.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670165.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653797.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663642.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654344.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664110.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663475.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657807.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671628.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670322.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661407.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664851.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663450.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662419.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661433.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655947.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661949.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657373.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659972.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000319286.6	MANE_select
ENST00000265896.10	MANE_select
ENST00000318410.12	MANE_select
ENST00000523297.5	alternative 5' UTR
ENST00000523741.5	alternative 5' UTR
ENST00000519010.5	alternative 5' UTR
ENST00000517532.5	alternative 5' UTR
ENST00000287437.8	MANE_select
ENST00000518013.5	alternative 5' UTR
ENST00000522563.5	alternative 5' UTR
ENST00000521460.1	QC splicing correct
ENST00000526947.1	QC splicing correct
ENST00000311922.4	MANE_select
ENST00000521991.2	pacbio_capture_seq_hsTestes : m150419_192637_42137_c100793212550000001823172010081512_s1_p0_69807_ccs ;
ENST00000652177.1	CAGE supported TSS
ENST00000661778.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000662179.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000523525.1	QC splicing correct
ENST00000500180.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660126.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658969.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664111.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000304916.4	MANE_select
ENST00000652209.1	CAGE supported TSS
ENST00000647190.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000643594.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000641746.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000641674.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000641414.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000642118.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000642018.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000641392.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000641106.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000641704.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000641309.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000641488.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000641218.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000641153.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663628.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000641523.2	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000657669.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664744.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668993.1	Assembled from SLRseq reads (SRP049776)
ENST00000645438.1	alternative 5' UTR
ENST00000652367.1	CAGE supported TSS
ENST00000502463.7	QC splicing correct
ENST00000641252.1	This protein has been detected experimentally: PMID 26552949
ENST00000517291.2	Start codon is ctg rather than atg (ref: PMID: 3277717)
ENST00000641036.1	This protein has been detected experimentally: PMID 26552949
ENST00000524013.2	NAGNAG splice site
ENST00000524013.2	Start codon is ctg rather than atg (ref: PMID: 3277717)
ENST00000621592.8	CAGE supported TSS
ENST00000621592.8	LR annotation
ENST00000621592.8	MANE_select
ENST00000621592.8	Start codon is ctg rather than atg (ref :PMID: 3277717)
ENST00000652288.1	CAGE supported TSS
ENST00000667305.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664214.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653522.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664139.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661830.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657289.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000504719.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669132.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656880.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660200.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670223.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652816.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662766.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665856.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000517525.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657211.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653845.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000657183.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666353.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658556.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654324.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000667539.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657693.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666080.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000524165.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657297.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664293.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657112.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665737.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663753.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665698.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000662410.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670795.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664265.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000523328.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654091.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662413.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660631.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665372.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000523427.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657356.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657449.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667418.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662061.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656402.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667204.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656491.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667714.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654105.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665721.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000518528.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669416.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660438.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661160.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665246.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659326.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657384.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666842.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000517790.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000522963.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657596.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661625.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654369.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664995.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656532.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656168.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661988.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657517.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670714.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669951.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666777.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000657667.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657451.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660456.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661205.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663059.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656693.1	Assembled from SLRseq reads (SRP049776)
ENST00000659625.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664299.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666776.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668123.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669272.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659912.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670532.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660896.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667149.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656396.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000523068.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000523068.2	QC splicing correct
ENST00000655594.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000520913.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000521122.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519481.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669082.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665166.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656948.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671088.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664924.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670204.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670602.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000517838.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663461.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670626.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653406.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658242.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669407.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653990.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655783.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666076.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659666.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656411.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664742.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655099.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662709.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000512617.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660122.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666452.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659892.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653497.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658840.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668098.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659106.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666147.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658350.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656999.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664610.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671092.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653853.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000523190.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658429.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660781.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660912.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663715.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652883.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657844.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660659.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661391.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660146.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658018.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671587.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666878.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652993.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658305.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656077.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666039.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668619.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668479.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660069.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658158.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653608.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669509.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000522414.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668215.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670535.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670009.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668351.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657682.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657945.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658065.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655148.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666223.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666105.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668480.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665175.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667630.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665457.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000652078.1	CAGE supported TSS
ENST00000517583.1	QC splicing correct
ENST00000676407.1	QC splicing correct
ENST00000676407.1	non canonical polymorphism
ENST00000675669.1	QC splicing correct
ENST00000675669.1	non canonical polymorphism
ENST00000675970.1	QC splicing correct
ENST00000675970.1	non canonical polymorphism
ENST00000671439.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000676129.1	QC splicing correct
ENST00000676129.1	non canonical polymorphism
ENST00000657400.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000676405.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000656242.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657409.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666317.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654421.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667974.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670803.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662033.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657046.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670054.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662317.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656316.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000675599.1	QC splicing correct
ENST00000675599.1	non canonical polymorphism
ENST00000658740.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666725.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668777.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666882.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664162.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669940.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000675878.1	QC splicing correct
ENST00000675878.1	non canonical polymorphism
ENST00000654987.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000676350.1	QC splicing correct
ENST00000676350.1	non canonical polymorphism
ENST00000662350.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666088.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660109.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664632.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000665685.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653764.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662908.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662207.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000666849.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671347.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653401.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664599.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668446.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655629.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000676060.1	QC splicing correct
ENST00000676060.1	non canonical polymorphism
ENST00000674940.1	QC splicing correct
ENST00000674940.1	non canonical polymorphism
ENST00000674750.1	QC splicing correct
ENST00000674750.1	non canonical polymorphism
ENST00000664043.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670148.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653363.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669617.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660163.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670386.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000675658.1	QC splicing correct
ENST00000675658.1	non canonical polymorphism
ENST00000665935.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000675208.1	QC splicing correct
ENST00000675208.1	non canonical polymorphism
ENST00000665348.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663521.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000676273.1	QC splicing correct
ENST00000676273.1	non canonical polymorphism
ENST00000667643.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663572.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663716.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668791.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000676148.1	QC splicing correct
ENST00000676148.1	non canonical polymorphism
ENST00000667962.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674656.1	QC splicing correct
ENST00000674656.1	non canonical polymorphism
ENST00000675316.1	QC splicing correct
ENST00000675316.1	non canonical U12
ENST00000675316.1	non canonical polymorphism
ENST00000674877.1	QC splicing correct
ENST00000674877.1	non canonical polymorphism
ENST00000667341.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000446592.7	QC splicing correct
ENST00000446592.7	non canonical polymorphism
ENST00000675506.1	QC splicing correct
ENST00000675506.1	non canonical polymorphism
ENST00000674599.1	QC splicing correct
ENST00000674599.1	non canonical polymorphism
ENST00000658861.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663991.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000675183.1	QC splicing correct
ENST00000675183.1	non canonical polymorphism
ENST00000660652.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000676099.1	QC splicing correct
ENST00000676099.1	non canonical U12
ENST00000676099.1	non canonical polymorphism
ENST00000671311.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671632.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000675109.1	QC splicing correct
ENST00000675109.1	non canonical U12
ENST00000675109.1	non canonical polymorphism
ENST00000675913.1	QC splicing correct
ENST00000675913.1	non canonical polymorphism
ENST00000675589.1	QC splicing correct
ENST00000675589.1	non canonical polymorphism
ENST00000657647.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000675527.1	QC splicing correct
ENST00000675527.1	non canonical U12
ENST00000675527.1	non canonical polymorphism
ENST00000676108.1	QC splicing correct
ENST00000676108.1	non canonical polymorphism
ENST00000674863.1	QC splicing correct
ENST00000674863.1	non canonical polymorphism
ENST00000675498.1	QC splicing correct
ENST00000675498.1	non canonical polymorphism
ENST00000661447.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652971.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000675186.1	QC splicing correct
ENST00000675186.1	non canonical polymorphism
ENST00000674639.1	QC splicing correct
ENST00000674639.1	non canonical polymorphism
ENST00000675435.1	QC splicing correct
ENST00000675435.1	non canonical polymorphism
ENST00000675532.1	QC splicing correct
ENST00000675532.1	non canonical polymorphism
ENST00000676069.1	QC splicing correct
ENST00000676069.1	non canonical polymorphism
ENST00000523151.6	QC splicing correct
ENST00000523151.6	non canonical polymorphism
ENST00000675948.1	QC splicing correct
ENST00000675948.1	non canonical polymorphism
ENST00000665364.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657251.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000675166.1	QC splicing correct
ENST00000675166.1	non canonical polymorphism
ENST00000674883.1	QC splicing correct
ENST00000674883.1	non canonical polymorphism
ENST00000674580.1	QC splicing correct
ENST00000674580.1	non canonical polymorphism
ENST00000675393.1	QC splicing correct
ENST00000675393.1	non canonical polymorphism
ENST00000520048.1	QC splicing correct
ENST00000520048.1	non canonical polymorphism
ENST00000674906.1	QC splicing correct
ENST00000674906.1	non canonical polymorphism
ENST00000676030.1	QC splicing correct
ENST00000676030.1	non canonical polymorphism
ENST00000670588.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000675072.1	QC splicing correct
ENST00000675072.1	non canonical U12
ENST00000664936.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652914.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657069.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669935.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663066.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658587.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000276708.9	MANE_select
ENST00000522746.5	alternative 5' UTR
ENST00000523509.5	alternative 5' UTR
ENST00000401979.6	alternative 5' UTR
ENST00000519110.5	alternative 5' UTR
ENST00000517654.5	alternative 5' UTR
ENST00000519540.5	alternative 5' UTR
ENST00000519142.5	alternative 5' UTR
ENST00000521223.5	alternative 5' UTR
ENST00000520204.5	alternative 5' UTR
ENST00000519020.5	alternative 5' UTR
ENST00000517672.5	alternative 5' UTR
ENST00000522361.1	alternative 5' UTR
ENST00000521014.1	QC splicing correct
ENST00000520146.2	Assembled from SLRseq reads (SRP049776)
ENST00000665358.1	Assembled from SLRseq reads (SRP049776)
ENST00000658834.1	Assembled from SLRseq reads (SRP049776)
ENST00000654339.1	Assembled from SLRseq reads (SRP049776)
ENST00000518721.6	MANE_select
ENST00000659449.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665729.1	Assembled from SLRseq reads (SRP049776)
ENST00000286355.10	MANE_select
ENST00000521490.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000254624.10	KIAA0143
ENST00000254624.10	MANE_select
ENST00000519920.1	not organism-supported
ENST00000254627.4	MANE_select
ENST00000388996.10	MANE_select
ENST00000638588.1	CAGE supported TSS
ENST00000648355.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000620350.5	MANE_select
ENST00000620350.5	genebuild_only_MANE
ENST00000677595.1	MANE_select
ENST00000677595.1	align_id:3754954|asmbl_245119
ENST00000519187.5	alternative 5' UTR
ENST00000519304.1	QC splicing correct
ENST00000519304.1	alternative 5' UTR
ENST00000666760.1	Assembled from SLRseq reads (SRP049776)
ENST00000395386.7	MANE_select
ENST00000608375.1	454 RNA-Seq supported
ENST00000220616.9	MANE_select
ENST00000338087.10	MANE_select
ENST00000522119.5	alternative 5' UTR
ENST00000519341.5	alternative 5' UTR
ENST00000521302.5	alternative 5' UTR
ENST00000523610.5	alternative 5' UTR
ENST00000519747.5	alternative 5' UTR
ENST00000519558.5	alternative 5' UTR
ENST00000664551.1	confirm experimentally
ENST00000250160.11	MANE_select
ENST00000323851.13	MANE_select
ENST00000323851.13	alternative 5' UTR
ENST00000537882.3	alternative 5' UTR
ENST00000675414.1	Snaptron_GTEX
ENST00000675568.1	intropolis_filtered
ENST00000675036.1	intropolis_filtered
ENST00000674521.1	intropolis_filtered
ENST00000676341.1	intropolis_filtered
ENST00000675068.1	Snaptron_GTEX
ENST00000675068.1	intropolis_filtered
ENST00000675056.1	intropolis_filtered
ENST00000675172.1	Snaptron_GTEX
ENST00000675273.1	Ensembl_RNAseq_introns_lymph
ENST00000675273.1	NMD likely if extended
ENST00000676142.1	Snaptron_GTEX
ENST00000676124.1	intropolis_filtered
ENST00000674925.1	Snaptron_GTEX
ENST00000674925.1	intropolis_filtered
ENST00000676222.1	Snaptron_GTEX
ENST00000676222.1	intropolis_filtered
ENST00000519228.5	alternative 5' UTR
ENST00000519580.6	alternative 5' UTR
ENST00000522890.5	alternative 5' UTR
ENST00000521544.5	alternative 5' UTR
ENST00000676022.1	intropolis_filtered
ENST00000675429.1	Snaptron_GTEX
ENST00000676005.1	alternative 5' UTR
ENST00000675437.1	intropolis_filtered
ENST00000675531.1	Snaptron_GTEX
ENST00000675531.1	intropolis_filtered
ENST00000676375.1	alternative 5' UTR
ENST00000674705.1	intropolis_filtered
ENST00000675600.1	intropolis_filtered
ENST00000674902.1	Snaptron_GTEX
ENST00000675357.1	Ensembl_RNAseq_introns_blood_brain;
ENST00000675357.1	Snaptron_GTEX
ENST00000676064.1	alternative 5' UTR
ENST00000676064.1	intropolis_filtered
ENST00000674839.1	Snaptron_GTEX
ENST00000674839.1	alternative 5' UTR
ENST00000675983.1	Snaptron_GTEX
ENST00000675983.1	alternative 5' UTR
ENST00000674605.1	alternative 5' UTR
ENST00000674804.1	alternative 5' UTR
ENST00000674804.1	intropolis_filtered
ENST00000522652.6	MANE_select
ENST00000521180.5	QC splicing correct
ENST00000523634.1	alternative 5' UTR
ENST00000519924.5	alternative 5' UTR
ENST00000523855.1	alternative 5' UTR
ENST00000661266.1	Assembled from SLRseq reads (SRP049776)
ENST00000377838.8	MANE_select
ENST00000520727.5	alternative 5' UTR
ENST00000429442.6	QC splicing correct
ENST00000429442.6	non canonical TEC
ENST00000523040.1	QC splicing correct
ENST00000657881.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660529.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000518674.1	non-canonical splice sites between exons 2 and 3
ENST00000355849.10	MANE_select
ENST00000523150.1	QC splicing correct
ENST00000666475.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000659405.1	Assembled from SLRseq reads (SRP049776)
ENST00000648077.2	Assembled from SLRseq reads (SRP049776)
ENST00000650445.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660691.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663951.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000523232.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000658944.1	Assembled from SLRseq reads (SRP049776)
ENST00000671540.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000520060.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000524346.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662546.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654723.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663759.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655492.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664755.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000669387.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667909.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000521097.5	QC splicing correct
ENST00000521034.1	QC splicing correct
ENST00000653309.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668447.1	Assembled from SLRseq reads (SRP049776)
ENST00000660704.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649090.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000657812.1	Assembled from SLRseq reads (SRP049776)
ENST00000657186.1	Assembled from RACEseq reads
ENST00000667239.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000519652.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666242.1	Assembled from SLRseq reads (SRP049776)
ENST00000395297.6	MANE_select
ENST00000160713.8	alternative 5' UTR
ENST00000517849.1	alternative 5' UTR
ENST00000520380.1	alternative 5' UTR
ENST00000303045.11	MANE_select
ENST00000487854.1	QC splicing correct
ENST00000517640.1	QC splicing correct
ENST00000522373.1	not best-in-genome evidence
ENST00000649696.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000650269.1	alternative 3' UTR
ENST00000520439.3	MANE_select
ENST00000648164.1	CAGE supported TSS
ENST00000648164.1	LR annotation
ENST00000648164.1	upstream ATG
ENST00000438773.4	CAGE supported TSS
ENST00000438773.4	LR annotation
ENST00000438773.4	MANE_select
ENST00000648948.2	alternative 5' UTR
ENST00000648948.2	upstream ATG
ENST00000631594.3	CAGE supported TSS
ENST00000631594.3	LR annotation
ENST00000220913.10	MANE_select
ENST00000220592.10	MANE_select
ENST00000521059.5	alternative 5' UTR
ENST00000522424.5	alternative 5' UTR
ENST00000521562.5	alternative 5' UTR
ENST00000523388.5	alternative 5' UTR
ENST00000520151.5	NMD likely if extended
ENST00000519024.5	alternative 5' UTR
ENST00000521791.5	alternative 5' UTR
ENST00000523067.5	alternative 5' UTR
ENST00000520475.5	alternative 5' UTR
ENST00000520892.5	alternative 5' UTR
ENST00000523803.5	alternative 5' UTR
ENST00000521907.5	alternative 5' UTR
ENST00000517453.5	alternative 5' UTR
ENST00000520045.5	alternative 5' UTR
ENST00000521395.5	alternative 5' UTR
ENST00000521332.5	alternative 5' UTR
ENST00000524040.5	alternative 5' UTR
ENST00000524257.5	alternative 5' UTR
ENST00000519811.6	MANE_select
ENST00000664702.1	Assembled from SLRseq reads (SRP049776)
ENST00000667929.1	Assembled from SLRseq reads (SRP049776)
ENST00000668517.1	Assembled from SLRseq reads (SRP049776)
ENST00000654205.1	Assembled from SLRseq reads (SRP049776)
ENST00000517878.6	MANE_select
ENST00000520606.1	QC splicing correct
ENST00000521073.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000377741.4	MANE_select
ENST00000523147.5	alternative 5' UTR
ENST00000521578.6	MANE_select
ENST00000524028.1	QC splicing correct
ENST00000521161.5	non canonical polymorphism
ENST00000606664.1	non canonical TEC
ENST00000667112.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427937.1	not organism-supported
ENST00000671293.1	Assembled from SLRseq reads (SRP049776)
ENST00000662748.1	Assembled from SLRseq reads (SRP049776)
ENST00000524325.6	MANE_select
ENST00000520166.5	NAGNAG in exon 9
ENST00000520166.5	NAGNAG splice site
ENST00000520462.5	alternative 5' UTR
ENST00000517894.5	QC splicing correct
ENST00000517894.5	non canonical conserved
ENST00000521208.5	QC splicing correct
ENST00000521208.5	alternative 5' UTR
ENST00000521208.5	non canonical conserved
ENST00000356613.4	MANE_select
ENST00000356613.4	NMD exception
ENST00000614134.1	NP_003715.3
ENST00000612905.2	MANE_select
ENST00000612905.2	alternative 5' UTR
ENST00000615982.4	alternative 3' UTR
ENST00000571961.7	NP_001266281
ENST00000503272.1	alternative 5' UTR
ENST00000591357.5	alternative 5' UTR
ENST00000591180.5	alternative 5' UTR
ENST00000587883.5	alternative 5' UTR
ENST00000585503.1	alternative 5' UTR
ENST00000587499.1	alternative 5' UTR
ENST00000301258.5	MANE_select
ENST00000301258.5	The rs2294008 is a human lineage specific T to C transition which affects the translation start of the protein. The derived allele C in some human populations changes an ATG codon to ACG which in turn disrupts the start codon (Met) into a Thr. The reference sequence has got the derived allele C and therefore it does not start on a Met. The first report on PSCA protein (PMID: 9465086)
ENST00000292430.10	MANE_select
ENST00000292430.10	upstream ATG
ENST00000669349.1	Assembled from SLRseq reads (SRP049776)
ENST00000520572.2	Assembled from SLRseq reads (SRP049776)
ENST00000665898.1	Assembled from SLRseq reads (SRP049776)
ENST00000663158.1	Assembled from SLRseq reads (SRP049776)
ENST00000662059.1	Assembled from SLRseq reads (SRP049776)
ENST00000654797.1	Assembled from SLRseq reads (SRP049776)
ENST00000336138.4	MANE_select
ENST00000246515.2	MANE_select
ENST00000359228.4	MANE_select
ENST00000317543.12	MANE_select
ENST00000621401.4	NP_803252.1
ENST00000652477.1	MANE_select
ENST00000652477.1	genebuild_only_MANE
ENST00000620006.4	alternative 5' UTR
ENST00000613110.4	alternative 5' UTR
ENST00000614268.4	alternative 5' UTR
ENST00000301263.5	MANE_select
ENST00000519411.1	not organism-supported
ENST00000220940.2	MANE_select
ENST00000292427.10	MANE_select
ENST00000517471.5	NP_001021384.1
ENST00000323110.2	MANE_select
ENST00000323110.2	NP_000489.3
ENST00000517503.1	downstream ATG
ENST00000429120.6	NP_001120685.1
ENST00000521699.5	alternative 5' UTR
ENST00000520466.5	alternative 5' UTR
ENST00000521003.5	alternative 5' UTR
ENST00000292494.11	MANE_select
ENST00000522971.5	alternative 5' UTR
ENST00000522024.1	alternative 5' UTR
ENST00000665431.1	Assembled from SLRseq reads (SRP049776)
ENST00000669519.1	Assembled from SLRseq reads (SRP049776)
ENST00000414417.6	alternative 5' UTR
ENST00000342752.9	MANE_select
ENST00000342752.9	NP_001123950.1
ENST00000622500.2	MANE_select
ENST00000520584.6	NMD exception
ENST00000520584.6	alternative 3' UTR
ENST00000520584.6	alternative 5' UTR
ENST00000330701.7	MANE_select
ENST00000330701.7	NMD exception
ENST00000330701.7	upstream ATG
ENST00000522452.2	NMD exception
ENST00000522452.2	upstream ATG
ENST00000340042.2	MANE_select
ENST00000340042.2	genebuild_only_MANE
ENST00000517411.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671046.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000518575.5	alternative 5' UTR
ENST00000518432.5	alternative 5' UTR
ENST00000330143.8	MANE_select
ENST00000329245.9	MANE_select
ENST00000518951.6	QC splicing correct
ENST00000519139.6	QC splicing correct
ENST00000289013.11	MANE_select
ENST00000333480.3	MANE_select
ENST00000262577.6	MANE_select
ENST00000653168.1	Assembled from SLRseq reads (SRP049776)
ENST00000526406.5	alternative 5' UTR
ENST00000529854.1	alternative 5' UTR
ENST00000533348.5	alternative 5' UTR
ENST00000262580.9	MANE_select
ENST00000525721.1	alternative 5' UTR
ENST00000533888.1	alternative 5' UTR
ENST00000398882.8	MANE_select
ENST00000529971.1	QC splicing correct
ENST00000449291.7	MANE_select
ENST00000442189.6	NP_115754.2
ENST00000528610.5	NP_001123528.1
ENST00000395119.7	NP_001951.2
ENST00000524624.5	alternative 5' UTR
ENST00000534380.5	alternative 5' UTR
ENST00000528382.1	QC splicing correct
ENST00000533204.5	alternative 5' UTR
ENST00000530191.5	alternative 5' UTR
ENST00000530616.5	NMD likely if extended
ENST00000531218.5	alternative 5' UTR
ENST00000533494.5	alternative 5' UTR
ENST00000530445.5	alternative 5' UTR
ENST00000525695.5	alternative 5' UTR
ENST00000526340.5	alternative 5' UTR
ENST00000525223.1	alternative 5' UTR
ENST00000532543.1	alternative 5' UTR
ENST00000531931.1	alternative 5' UTR
ENST00000526710.1	alternative 5' UTR
ENST00000531281.1	alternative 5' UTR
ENST00000532596.5	alternative 5' UTR
ENST00000524883.1	alternative 5' UTR
ENST00000531670.5	alternative 5' UTR
ENST00000528519.1	alternative 5' UTR
ENST00000529832.5	alternative 5' UTR
ENST00000530306.5	alternative 5' UTR
ENST00000530545.5	alternative 5' UTR
ENST00000525261.5	alternative 5' UTR
ENST00000534804.5	alternative 5' UTR
ENST00000524900.1	alternative 5' UTR
ENST00000526135.5	alternative 5' UTR
ENST00000531953.5	alternative 5' UTR
ENST00000526133.1	alternative 5' UTR
ENST00000534475.5	alternative 5' UTR
ENST00000528303.5	alternative 5' UTR
ENST00000504548.4	MANE_select
ENST00000495276.6	CAGE supported TSS
ENST00000495276.6	MANE_select
ENST00000447926.6	CAGE supported TSS
ENST00000433751.5	CAGE supported TSS
ENST00000529064.5	alternative 5' UTR
ENST00000425753.7	MANE_select
ENST00000529048.5	alternative 5' UTR
ENST00000533817.5	alternative 5' UTR
ENST00000526290.1	alternative 5' UTR
ENST00000526926.6	MANE_select
ENST00000526926.6	alternative 5' UTR
ENST00000458270.2	NP_001075949.1
ENST00000534303.5	alternative 5' UTR
ENST00000529833.5	alternative 5' UTR
ENST00000358656.9	MANE_select
ENST00000442058.6	NMD likely if extended
ENST00000526970.5	alternative 5' UTR
ENST00000532158.5	alternative 5' UTR
ENST00000532205.5	alternative 5' UTR
ENST00000542437.1	MANE_select
ENST00000338033.9	MANE_select
ENST00000388913.4	MANE_select
ENST00000527139.7	MANE_select
ENST00000529743.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000529743.2	QC splicing correct
ENST00000356994.7	MANE_select
ENST00000526683.6	MANE_select
ENST00000654408.1	Assembled from SLRseq reads (SRP049776)
ENST00000442628.7	MANE_select
ENST00000647726.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000615648.2	MANE_select
ENST00000615648.2	NP_112598
ENST00000665295.1	Assembled from SLRseq reads (SRP049776)
ENST00000345136.8	CAGE supported TSS
ENST00000345136.8	MANE_select
ENST00000313028.12	MANE_select
ENST00000525879.5	alternative 5' UTR
ENST00000528625.5	alternative 5' UTR
ENST00000525486.5	alternative 5' UTR
ENST00000531537.5	alternative 5' UTR
ENST00000529842.5	alternative 5' UTR
ENST00000528914.5	alternative 5' UTR
ENST00000528136.5	alternative 5' UTR
ENST00000529311.5	alternative 5' UTR
ENST00000532311.5	alternative 5' UTR
ENST00000531707.1	alternative 5' UTR
ENST00000395068.9	MANE_select
ENST00000529301.5	alternative 5' UTR
ENST00000530898.1	alternative 5' UTR
ENST00000447830.2	NP_001127846
ENST00000528912.1	not organism-supported
ENST00000618853.5	MANE_select
ENST00000567871.2	QC splicing correct
ENST00000567871.2	alternative 5' UTR
ENST00000316052.6	MANE_select
ENST00000355091.9	MANE_select
ENST00000526233.5	QC splicing correct
ENST00000318911.5	MANE_select
ENST00000398712.7	MANE_select
ENST00000322428.10	MANE_select
ENST00000532522.5	alternative 5' UTR
ENST00000527572.5	alternative 5' UTR
ENST00000323662.9	MANE_select
ENST00000323662.9	confirm experimentally
ENST00000347708.5	MANE_select
ENST00000567180.3	MANE_select
ENST00000527694.1	not organism-supported
ENST00000528838.6	MANE_select
ENST00000528718.6	MANE_select
ENST00000569446.3	MANE_select
ENST00000675888.1	alternative 5' UTR
ENST00000524541.5	alternative 5' UTR
ENST00000532815.2	alternative 5' UTR
ENST00000675292.1	alternative 5' UTR
ENST00000530047.5	alternative 5' UTR
ENST00000527078.6	alternative 5' UTR
ENST00000674870.1	alternative 5' UTR
ENST00000526338.7	NP_001350051.1
ENST00000402965.5	alternative 5' UTR
ENST00000533662.2	alternative 5' UTR
ENST00000534725.6	alternative 5' UTR
ENST00000674929.1	alternative 5' UTR
ENST00000675597.1	alternative 5' UTR
ENST00000643944.2	CAGE supported TSS
ENST00000643944.2	LR annotation
ENST00000643944.2	MANE_select
ENST00000643944.2	alternative 5' UTR
ENST00000675121.1	alternative 5' UTR
ENST00000675280.1	alternative 5' UTR
ENST00000331890.6	MANE_select
ENST00000533715.2	upstream uORF
ENST00000308860.11	MANE_select
ENST00000616140.2	MANE_select
ENST00000616140.2	genebuild_only_MANE
ENST00000301305.8	MANE_select
ENST00000292510.6	MANE_select
ENST00000292510.6	genebuild_only_MANE
ENST00000409379.8	MANE_select
ENST00000530374.6	MANE_select
ENST00000526887.5	alternative 5' UTR
ENST00000403000.6	alternative 5' UTR
ENST00000424149.6	alternative 5' UTR
ENST00000530637.1	alternative 5' UTR
ENST00000645548.2	MANE_select
ENST00000377317.5	MANE_select
ENST00000529283.5	alternative 5' UTR
ENST00000394955.3	MANE_select
ENST00000394955.3	genebuild_only_MANE
ENST00000301327.5	MANE_select
ENST00000617875.6	MANE_select
ENST00000531875.2	QC splicing correct
ENST00000527730.1	alternative 5' UTR
ENST00000292524.6	MANE_select
ENST00000529022.5	alternative 5' UTR
ENST00000530854.1	alternative 5' UTR
ENST00000525766.1	alternative 5' UTR
ENST00000531310.1	QC splicing correct
ENST00000529415.7	MANE_select
ENST00000524821.6	MANE_select
ENST00000377307.6	NP_079527.1
ENST00000524394.2	QC splicing correct
ENST00000292562.12	MANE_select
ENST00000429371.7	MANE_select
ENST00000394920.6	alternative 5' UTR
ENST00000528957.6	MANE_select
ENST00000528957.6	alternative 5' UTR
ENST00000527914.5	alternative 5' UTR
ENST00000532702.1	alternative 5' UTR
ENST00000525105.5	alternative 5' UTR
ENST00000446747.6	alternative 5' UTR
ENST00000525266.5	alternative 5' UTR
ENST00000402718.4	alternative 5' UTR
ENST00000305103.4	MANE_select
ENST00000305103.4	alternative 5' UTR
ENST00000529143.1	alternative 5' UTR
ENST00000533270.1	alternative 5' UTR
ENST00000664211.1	Assembled from RACEseq reads
ENST00000417550.7	MANE_select
ENST00000533221.5	alternative 5' UTR
ENST00000533622.5	alternative 5' UTR
ENST00000525694.5	QC splicing correct
ENST00000525694.5	alternative 5' UTR
ENST00000527049.1	alternative 5' UTR
ENST00000394909.7	MANE_select
ENST00000276816.8	alternative 5' UTR
ENST00000532351.5	alternative 5' UTR
ENST00000527811.5	alternative 5' UTR
ENST00000529315.2	alternative 5' UTR
ENST00000331434.7	MANE_select
ENST00000648784.1	alternative 3' UTR
ENST00000529593.1	not organism-supported
ENST00000422679.1	MIR1302-9
ENST00000422679.1	putative novel transcript
ENST00000442069.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000442069.3	putative novel transcript
ENST00000621255.5	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000620326.1	putative novel transcript
ENST00000613372.5	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000429980.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000429980.6	putative novel transcript
ENST00000429980.1	putative novel transcript
ENST00000458364.1	putative novel transcript
ENST00000442069.1	putative novel transcript
ENST00000435421.1	putative novel transcript
ENST00000662781.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427318.2	putative novel transcript
ENST00000652777.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000416242.2	CAGE supported TSS
ENST00000382500.4	CCDS34975.1
ENST00000382500.4	MANE_select
ENST00000382500.4	forkhead box D4 (FKHL9, FREAC5)
ENST00000356521.8	COBW-like protein (LOC55871)
ENST00000475990.5	novel transcript
ENST00000619157.4	non canonical conserved
ENST00000314367.14	COBW-like protein (LOC55871)
ENST00000475411.5	novel transcript
ENST00000612045.4	non canonical conserved
ENST00000465014.6	non canonical conserved
ENST00000382447.8	COBW-like protein (LOC55871)
ENST00000487575.6	Splice site conserved accross many species, mouse, rat, dog, horse, cow, chicken, fish.  Lots of mRNAs from different Libraries and also different ESTs with no SNPs found in region
ENST00000487575.6	non canonical conserved
ENST00000487575.6	novel transcript
ENST00000464198.5	novel transcript
ENST00000495302.5	novel transcript
ENST00000462513.5	novel transcript
ENST00000616944.4	non canonical conserved
ENST00000498044.6	novel transcript
ENST00000618361.4	non canonical conserved
ENST00000618061.4	non canonical conserved
ENST00000489272.5	novel transcript
ENST00000616803.4	non canonical conserved
ENST00000377447.7	COBW-like protein (LOC55871)
ENST00000431099.3	COBW-like protein (LOC55871)
ENST00000382389.5	COBW-like protein (LOC55871)
ENST00000382393.2	COBW-like protein (LOC55871)
ENST00000657756.1	Assembled from SLRseq reads (SRP049776)
ENST00000432829.7	MANE_select
ENST00000479404.5	alternative 5' UTR
ENST00000487230.5	alternative 5' UTR
ENST00000495184.5	Retained intron
ENST00000429661.1	putative novel transcript
ENST00000608617.1	454 RNA-Seq supported
ENST00000382303.5	kidney ankyrin repeat-containing protein (KANK, KIAA0172)
ENST00000467541.5	novel transcript
ENST00000475690.1	novel transcript
ENST00000382297.7	CAGE supported TSS
ENST00000382297.7	MANE_select
ENST00000382297.7	alternative 5' UTR
ENST00000674102.1	CAGE supported TSS
ENST00000674102.1	alternative 5' UTR
ENST00000354485.5	kidney ankyrin repeat-containing protein (KANK,, KIAA0172)
ENST00000382289.6	kidney ankyrin repeat-containing protein (KANK, KIAA0172)
ENST00000442442.1	putative novel transcript
ENST00000662822.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667410.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654035.1	Assembled from SLRseq reads (SRP049776)
ENST00000441028.1	putative novel transcript
ENST00000444793.1	putative novel transcript
ENST00000421436.1	translation initiation factor (SUI1) pseudogene
ENST00000421645.2	putative novel transcript
ENST00000608097.1	nested 454 RNA-Seq supported
ENST00000382276.8	MANE_select
ENST00000382276.8	doublesex and mab-3 related transcription factor 1
ENST00000190165.3	MANE_select
ENST00000190165.3	doublesex and mab-3 related transcription factor 3
ENST00000417254.1	doublesex and mab-3 related transcription factor 3
ENST00000437555.1	H3 histone pseudogene
ENST00000653666.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000625222.1	CAGE supported TSS
ENST00000382255.7	doublesex and mab-3 related transcription factor 2
ENST00000412350.6	doublesex and mab-3 related transcription factor 2
ENST00000358146.6	doublesex and mab-3 related transcription factor 2
ENST00000259622.10	doublesex and mab-3 related transcription factor 2
ENST00000443334.1	DiGeorge syndrome-related protein pseudogene
ENST00000422868.2	ubiquitin pseudogene
ENST00000660579.1	Assembled from SLRseq reads (SRP049776)
ENST00000637383.1	alternative 5' UTR
ENST00000357248.8	alternative 5' UTR
ENST00000450198.6	NP_001276326.1
ENST00000450198.6	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SNF2LA)
ENST00000349721.8	MANE_select
ENST00000349721.8	alternative 5' UTR
ENST00000636903.1	alternative 5' UTR
ENST00000637352.1	alternative 5' UTR
ENST00000637097.1	alternative 5' UTR
ENST00000457226.2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SNF2LA)
ENST00000457226.2	alternative 5' UTR
ENST00000382194.6	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SNF2LA)
ENST00000439732.6	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SNF2LA)
ENST00000439732.6	alternative 5' UTR
ENST00000637806.1	alternative 5' UTR
ENST00000636221.1	alternative 5' UTR
ENST00000382203.5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SNF2LA)
ENST00000637134.1	alternative 5' UTR
ENST00000491574.2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SNF2LA)
ENST00000452193.5	CAGE supported TSS
ENST00000452193.5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SNF2LA)
ENST00000324954.10	CAGE supported TSS
ENST00000324954.10	NP_001276327.1
ENST00000635133.1	CAGE supported TSS
ENST00000635133.1	alternative 5' UTR
ENST00000634931.1	CAGE supported TSS
ENST00000634931.1	alternative 5' UTR
ENST00000423555.6	CAGE supported TSS
ENST00000423555.6	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SNF2LA)
ENST00000423555.6	alternative 5' UTR
ENST00000382185.6	CAGE supported TSS
ENST00000382185.6	alternative 5' UTR
ENST00000635590.1	CAGE supported TSS
ENST00000635590.1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SNF2LA)
ENST00000634989.1	CAGE supported TSS
ENST00000634989.1	alternative 5' UTR
ENST00000302401.8	CAGE supported TSS
ENST00000302401.8	NP_001276329.1
ENST00000302401.8	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SNF2LA)
ENST00000382183.6	CAGE supported TSS
ENST00000382183.6	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SNF2LA)
ENST00000417599.6	CAGE supported TSS
ENST00000417599.6	NP_001276328.1
ENST00000417599.6	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SNF2LA)
ENST00000382186.6	CAGE supported TSS
ENST00000382186.6	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SNF2LA)
ENST00000635530.1	CAGE supported TSS
ENST00000635530.1	alternative 5' UTR
ENST00000635388.1	CAGE supported TSS
ENST00000635388.1	alternative 5' UTR
ENST00000634706.1	CAGE supported TSS
ENST00000634706.1	alternative 5' UTR
ENST00000634338.1	CAGE supported TSS
ENST00000634338.1	alternative 5' UTR
ENST00000635688.1	CAGE supported TSS
ENST00000634435.1	CAGE supported TSS
ENST00000634343.1	CAGE supported TSS
ENST00000635659.1	CAGE supported TSS
ENST00000416751.2	CAGE supported TSS
ENST00000416751.2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SNF2LA)
ENST00000416751.2	alternative 5' UTR
ENST00000635397.1	CAGE supported TSS
ENST00000635397.1	NMD likely if extended
ENST00000634781.1	CAGE supported TSS
ENST00000634688.1	CAGE supported TSS
ENST00000634688.1	alternative 5' UTR
ENST00000426860.1	putative novel transcript
ENST00000648733.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000657742.1	Assembled from SLRseq reads (SRP049776)
ENST00000653026.1	Assembled from SLRseq reads (SRP049776)
ENST00000667661.1	Assembled from SLRseq reads (SRP049776)
ENST00000671040.1	Assembled from SLRseq reads (SRP049776)
ENST00000671040.1	novel transcript
ENST00000653709.1	Assembled from SLRseq reads (SRP049776)
ENST00000416826.6	novel transcript (FLJ35024)
ENST00000655564.1	Assembled from SLRseq reads (SRP049776)
ENST00000668403.1	Assembled from SLRseq reads (SRP049776)
ENST00000657269.1	Assembled from SLRseq reads (SRP049776)
ENST00000447278.2	Assembled from SLRseq reads (SRP049776)
ENST00000424605.5	novel transcript
ENST00000445631.1	putative novel transcript
ENST00000382096.6	alternative 5' UTR
ENST00000680746.1	NP_001309154.1
ENST00000680746.1	very low density lipoprotein receptor
ENST00000382100.8	MANE_select
ENST00000382100.8	very low density lipoprotein receptor
ENST00000680891.1	alternative 3' UTR
ENST00000681306.1	very low density lipoprotein receptor
ENST00000681618.1	NP_001309155.1
ENST00000680332.1	very low density lipoprotein receptor
ENST00000681518.1	alternative 3' UTR
ENST00000667440.1	Assembled from RACEseq reads
ENST00000382082.4	MANE_select
ENST00000382082.4	voltage-gated potassium channel Kv11.1 (Kv11.1)
ENST00000397885.3	MANE_select
ENST00000469168.1	putative novel transcript
ENST00000663825.1	Assembled from SLRseq reads (SRP049776)
ENST00000657258.1	Assembled from SLRseq reads (SRP049776)
ENST00000654614.1	Assembled from SLRseq reads (SRP049776)
ENST00000659476.1	Assembled from SLRseq reads (SRP049776)
ENST00000382004.7	regulatory factor X, 3 (influences HLA class II expression)
ENST00000358730.6	regulatory factor X, 3 (influences HLA class II expression)
ENST00000449234.1	regulatory factor X, 3 (influences HLA class II expression)
ENST00000449234.1	this variant and variant 4 could be part of the same variant
ENST00000458034.1	regulatory factor X, 3 (influences HLA class II expression)
ENST00000458034.1	this variant and variant 3 could be part of the same variant
ENST00000457373.5	regulatory factor X, 3 (influences HLA class II expression)
ENST00000451859.5	regulatory factor X, 3 (influences HLA class II expression)
ENST00000442560.5	regulatory factor X, 3 (influences HLA class II expression)
ENST00000420720.5	regulatory factor X, 3 (influences HLA class II expression)
ENST00000449190.5	regulatory factor X, 3 (influences HLA class II expression)
ENST00000381984.2	regulatory factor X, 3 (influences HLA class II expression)
ENST00000438600.1	RPL7 (ribosomal protein L7) pseudogene
ENST00000423112.2	novel transcript
ENST00000457566.1	putative novel transcript
ENST00000659166.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430387.1	putative novel transcript
ENST00000438147.2	putative novel transcript
ENST00000381971.8	MANE_select
ENST00000381971.8	NP_001035878.1
ENST00000467497.6	novel protein
ENST00000462164.5	alternative 5' UTR
ENST00000478315.5	alternative 5' UTR
ENST00000478844.5	alternative 5' UTR
ENST00000481827.5	alternative 5' UTR
ENST00000477901.5	alternative 5' UTR
ENST00000451340.2	novel transcript (MGC16153)
ENST00000457383.1	putative novel transcript
ENST00000262352.8	MANE_select
ENST00000490167.1	solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
ENST00000422398.1	solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
ENST00000486047.5	novel transcript
ENST00000223517.9	novel protein
ENST00000471669.1	novel protein
ENST00000429407.1	ribosomal protein S6 (RPS6) pseudogene
ENST00000381883.5	MANE_select
ENST00000381883.5	novel protein similar to FLJ90191
ENST00000381858.5	novel protein
ENST00000381854.4	MANE_select
ENST00000479095.1	putative novel transcript
ENST00000381809.8	MANE_select
ENST00000359883.6	NP_001186785.1
ENST00000447596.4	NP_001186781.1
ENST00000655730.1	Assembled from SLRseq reads (SRP049776)
ENST00000663238.1	Assembled from SLRseq reads (SRP049776)
ENST00000402406.2	ribosomal protein S5 (RPS5) pseudogene
ENST00000381750.9	MANE_select
ENST00000381750.9	RNA cyclase homolog (RNAC)
ENST00000381732.3	RNA cyclase homolog (RNAC)
ENST00000473230.1	RNA cyclase homolog (RNAC)
ENST00000381730.5	RNA cyclase homolog (RNAC)
ENST00000381728.5	RNA cyclase homolog (RNAC)
ENST00000441844.2	RNA cyclase homolog (RNAC)
ENST00000412782.2	Kruppel-like factor 4 (gut) (KLF4) pseudogene
ENST00000443970.1	miR-101-precursor-9 micro RNA
ENST00000397777.3	heterogeneous nuclear ribonucleoprotein A1 (HNRPA1) pseudogene
ENST00000476574.5	Janus kinase 2 (a protein tyrosine kinase)
ENST00000381652.4	Janus kinase 2 (a protein tyrosine kinase)
ENST00000381652.4	MANE_select
ENST00000487310.1	Janus kinase 2 (a protein tyrosine kinase)
ENST00000442675.1	casein kinase pseudogene
ENST00000422953.1	trans-prenyltransferase (TPT) pseudogene
ENST00000448266.2	NADH dehydrogenase 6 (MTND6) pseuodgene
ENST00000456661.1	NADH dehydrogenase 1 (MTND1) pseudogene
ENST00000429111.1	cytochrome c oxidase I (MTCO1) pseudogene
ENST00000431069.1	cytochrome c oxidase II (MTCO2) pseudogene
ENST00000428071.1	ATP synthase 6 (MTATP6) pseudogene
ENST00000455103.1	cytochrome c oxidase III (MTCO3) pseudogene
ENST00000435799.1	NADH dehydrogenase 4 (MTND4)pseudogene
ENST00000441481.1	pseudogene similar to part of NADH dehydrogenase 5 (MTND5)
ENST00000423021.2	transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) (TCF3) pseudogene
ENST00000519308.1	immunoglobulin heavy constant epsilon pseudogene 2
ENST00000649639.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000381641.4	MANE_select
ENST00000448546.1	insulin-like 4 (placenta) (INSL4) pseudogene
ENST00000239316.4	MANE_select
ENST00000239316.4	insulin-like 4 (placenta) (PLACENTIN, EPIL)
ENST00000381627.4	MANE_select
ENST00000381627.4	relaxin 2 (H2) (RLXH2) (variant 1)
ENST00000432430.2	high-mobility group nucleosomal binding domain 2 (HMGN2) pseudogene
ENST00000223862.2	MANE_select
ENST00000223862.2	relaxin 1 (H1) (RLXH1)
ENST00000487557.2	relaxin 1 (H1) (RLXH1)
ENST00000415892.1	novel pseudogene
ENST00000223864.7	MANE_select
ENST00000223864.7	uncharacterized hematopoietic stem/progenitor cells protein (MDS030)
ENST00000482696.5	novel transcript
ENST00000472145.5	novel transcript
ENST00000473877.1	novel transcript
ENST00000381577.4	B7-H1 protein (PD-L1)
ENST00000381577.4	MANE_select
ENST00000474218.1	novel transcript
ENST00000492923.1	novel transcript
ENST00000661858.1	Assembled from SLRseq reads (SRP049776)
ENST00000650674.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000397747.5	MANE_select
ENST00000397747.5	programmed death ligand 2 (PDL2) (PDCD1L2)
ENST00000443792.1	putative novel transcript
ENST00000251879.10	confirm experimentally
ENST00000251879.10	novel protein (contains DKFZp434D105, KIAA1432 and FLJ12580)
ENST00000414202.7	DKFZp434D105
ENST00000414202.7	FLJ12580
ENST00000414202.7	KIAA1432
ENST00000414202.7	MANE_select
ENST00000414202.7	NP_065880.1
ENST00000414202.7	confirm experimentally
ENST00000545243.1	not organism-supported
ENST00000426764.1	putative novel transcript
ENST00000339450.10	MANE_select
ENST00000487088.5	novel protein (FLJ23309)
ENST00000419465.1	adenylate kinase 4 (AK4) pseudogene
ENST00000381461.6	confirm experimentally
ENST00000399933.8	MANE_select
ENST00000399933.8	confirm experimentally
ENST00000540714.1	novel protein similar to K06A9.1b.p (includes FLJ34054) (KIAA2026)
ENST00000513355.2	not organism-supported
ENST00000381477.8	MANE_select
ENST00000381477.8	melan-A (MART-1)
ENST00000381476.5	alternative 5' UTR
ENST00000381476.5	alternatively spliced 5' UTR, shares CDS with bA546N22.3.1
ENST00000381476.5	melan-A (MART-1)
ENST00000381471.1	alternative 5' UTR
ENST00000381471.1	alternatively spliced 5' UTR, shares CDS with bA546N22.3.1
ENST00000381471.1	melan-A (MART-1)
ENST00000482341.1	melan-A (MART-1)
ENST00000490518.1	melan-A (MART-1)
ENST00000259569.6	MANE_select
ENST00000485372.1	novel protein similar to RAN binding protein 6 (RANBP6)
ENST00000437881.1	putative novel transcript
ENST00000416942.2	general transcription factor IIIA (GTF3A) pseudogene
ENST00000381434.7	novel protein (DVS27)
ENST00000463336.1	novel transcript
ENST00000456723.1	selenoprotein T (LOC51714) pseudogene
ENST00000344545.6	novel protein kinase (NYD-SP25)
ENST00000344545.6	translation different to that published in TR:Q96J77, with F instead of L at amino acid 118
ENST00000381428.1	novel protein kinase (NYD-SP25)
ENST00000314556.3	novel protein kinase (NYD-SP25)
ENST00000276893.10	MANE_select
ENST00000276893.10	ubiquitin-like, containing PHD and RING finger domains 2 (URF2)
ENST00000381373.3	ubiquitin-like, containing PHD and RING finger domains 2 (URF2)
ENST00000450508.1	ubiquitin-like, containing PHD and RING finger domains 2 (URF2)
ENST00000484159.5	FLJ16243
ENST00000477183.1	novel transcript
ENST00000485617.6	novel transcript
ENST00000479000.1	novel transcript
ENST00000492853.1	novel transcript
ENST00000481243.1	novel transcript
ENST00000411561.1	putative novel transcript
ENST00000639639.1	CAGE supported TSS
ENST00000639639.1	glycine dehydrogenase (decarboxylating; glycine decarboxylase, glycine cleavage system protein P)
ENST00000321612.8	MANE_select
ENST00000638661.1	CAGE supported TSS
ENST00000639318.1	CAGE supported TSS
ENST00000477960.1	glycine dehydrogenase (decarboxylating; glycine decarboxylase, glycine cleavage system protein P)
ENST00000640592.1	glycine dehydrogenase (decarboxylating; glycine decarboxylase, glycine cleavage system protein P)
ENST00000640208.1	CAGE supported TSS
ENST00000463305.1	glycine dehydrogenase (decarboxylating; glycine decarboxylase, glycine cleavage system protein P)
ENST00000638654.1	CAGE supported TSS
ENST00000451028.1	pseudogene similar to part of RP42 homolog
ENST00000332361.5	ribosomal protein L23a (RPL23A) pseudogene
ENST00000435535.1	ribosomal protein S3A (RPS3A) pseudogene
ENST00000427308.1	60S ribosomal protein L35a (RPL35A) pseudogene
ENST00000664463.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000412339.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000412339.2	putative novel transcript
ENST00000666851.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452643.5	novel transcript
ENST00000443688.1	novel transcript
ENST00000381306.7	KIAA0780
ENST00000381309.8	MANE_select
ENST00000496464.1	non canonical polymorphism
ENST00000490806.5	novel transcript
ENST00000649299.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000654575.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413888.1	ribosomal protein L4 (HRPL4) (RPL4) pseudogene
ENST00000358227.5	MANE_select
ENST00000358227.5	novel protein
ENST00000484082.1	novel transcript
ENST00000469050.1	novel transcript
ENST00000668681.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656028.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435444.1	putative novel transcript
ENST00000413066.1	putative novel transcript
ENST00000651105.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000486161.5	NP_569075.2
ENST00000471274.1	protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD)
ENST00000481079.1	alternative 5' UTR
ENST00000418571.2	putative novel transcript
ENST00000391389.3	ribosomal protein 18 (RPL18) pseudogene
ENST00000666050.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665783.1	Assembled from SLRseq reads (SRP049776)
ENST00000447950.1	novel transcript
ENST00000430766.1	novel transcript
ENST00000419824.1	novel transcript
ENST00000449531.1	novel transcript
ENST00000437701.1	ribosomal protein S12 (RPS12) pseudogene
ENST00000427161.1	putative novel transcript
ENST00000441805.1	pseudogene similar to part of ribosomal protein S3A (RPS3A)
ENST00000434743.1	pseudogene similar to part of A kinase (PRKA) anchor protein 8 (AKAP8)
ENST00000437471.1	putative novel transcript
ENST00000657567.1	Assembled from SLRseq reads (SRP049776)
ENST00000649122.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000452685.1	novel transcript
ENST00000663621.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000473763.1	alternative 5' UTR
ENST00000388918.10	MANE_select
ENST00000381136.2	tyrosinase-related protein 1
ENST00000473504.1	this variant and a variant 3 could be part of the same variant
ENST00000473504.1	tyrosinase-related protein 1
ENST00000650458.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000654076.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671522.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000319264.4	MANE_select
ENST00000319264.4	novel protein (FLJ38505, FLJ90271)
ENST00000489107.1	putative novel transcript
ENST00000649120.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000666564.1	Assembled from SLRseq reads (SRP049776)
ENST00000381017.6	multiple PDZ domain protein
ENST00000319217.12	CAGE supported TSS
ENST00000319217.12	MANE_select
ENST00000319217.12	multiple PDZ domain protein
ENST00000438511.5	multiple PDZ domain protein
ENST00000319198.10	multiple PDZ domain protein
ENST00000545857.5	multiple PDZ domain protein
ENST00000494251.1	multiple PDZ domain protein
ENST00000442428.1	novel transcript
ENST00000664575.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664575.1	putative novel transcript
ENST00000428006.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664700.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000664438.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000604724.6	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000661860.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655038.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000605459.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663740.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668698.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449745.1	pescadillo homolog 1, containing BRCT domain (zebrafish) (PES1) pseudogene
ENST00000442260.1	novel transcript
ENST00000434028.1	ribosomal protein L3 (RPL3) pseudogene
ENST00000380959.7	nuclear factor I/B (NFIB2, NFIB3, NFI-RED)
ENST00000380959.7	nuclear factor I/B (NFIB2, NRFIB3, NFI-RED)
ENST00000380953.6	MANE_select
ENST00000380953.6	nuclear factor I/B (NFIB2, NFIB3, NFI-RED)
ENST00000380953.6	nuclear factor I/B (NFIB2, NRFIB3, NFI-RED)
ENST00000397575.7	nuclear factor I/B (NFIB2, NFIB3, NFI-RED)
ENST00000397575.7	nuclear factor I/B (NFIB2, NRFIB3, NFI-RED)
ENST00000397581.6	nuclear factor I/B (NFIB2, NFIB3, NFI-RED)
ENST00000397581.6	nuclear factor I/B (NFIB2, NRFIB3, NFI-RED)
ENST00000397579.6	nuclear factor I/B (NFIB2, NFIB3, NFI-RED)
ENST00000397579.6	nuclear factor I/B (NFIB2, NRFIB3, NFI-RED)
ENST00000606230.2	CAGE supported TSS
ENST00000636432.1	CAGE supported TSS
ENST00000380924.1	CAGE supported TSS
ENST00000380924.1	nuclear factor I/B (NFIB2, NFIB3, NFI-RED)
ENST00000380921.3	nuclear factor I/B (NFIB2, NRFIB3, NFI-RED)
ENST00000380921.3	proetin translation at 3' end extended compared to that published in EM:U70862.1
ENST00000493697.1	CAGE supported TSS
ENST00000493697.1	nuclear factor I/B (NFIB2, NRFIB3, NFI-RED)
ENST00000435137.1	ribosomal protein L7a (RPL7A) pseudogene
ENST00000671131.1	Assembled from SLRseq reads (SRP049776)
ENST00000416996.1	putative novel transcript
ENST00000440947.1	putative novel transcript
ENST00000659981.1	Assembled from SLRseq reads (SRP049776)
ENST00000421119.1	pseudogene similar to part of nuclear factor I/A (NFIA)
ENST00000380916.9	MANE_select
ENST00000380916.9	novel protein similar to mouse 9130404H11Rik protein
ENST00000497966.1	novel transcript
ENST00000380911.4	MANE_select
ENST00000380911.4	cerberus 1 homolog, cysteine knot superfamily (Xenopus laevis)
ENST00000380894.5	called TILRR in PMID: 19940113
ENST00000380880.4	CAGE supported TSS
ENST00000380880.4	MANE_select
ENST00000497634.2	novel protein
ENST00000658686.1	Assembled from SLRseq reads (SRP049776)
ENST00000652129.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000423965.2	pseudogene similar to part of chloride channel 3 (CLCN3) (CLC3)
ENST00000397561.3	lactate dehdrogenase A (LDHA) (LOC158222) pseudogene
ENST00000502889.1	novel pseudogene (FLJ20543)
ENST00000512701.6	NP_689787.2
ENST00000444159.1	ribosomal protein L7 (RPL7) pseudogene
ENST00000380821.7	small nuclear RNA activating complex, polypeptide 3, 50kDa (SNAP50)
ENST00000467062.5	small nuclear RNA activating complex, polypeptide 3, 50kDa (SNAP50)
ENST00000490969.5	small nuclear RNA activating complex, polypeptide 3, 50kDa (SNAP50)
ENST00000421710.5	small nuclear RNA activating complex, polypeptide 3, 50kDa (SNAP50)
ENST00000461041.1	small nuclear RNA activating complex, polypeptide 3, 50kDa (SNAP50)
ENST00000380799.1	small nuclear RNA activating complex, polypeptide 3, 50kDa (SNAP50)
ENST00000380733.9	MANE_select
ENST00000380733.9	PC4 and SFRS1 interacting protein 2 (LEDGF)
ENST00000380738.8	PC4 and SFRS1 interacting protein 2 (LEDGF)
ENST00000380738.8	alternative 5' UTR
ENST00000380715.5	PC4 and SFRS1 interacting protein 2
ENST00000380716.8	PC4 and SFRS1 interacting protein 2 (p52)
ENST00000481862.1	PC4 and SFRS1 interacting protein 2 (LEDGF)
ENST00000495873.1	PC4 and SFRS1 interacting protein 2 (LEDGF)
ENST00000487363.5	PC4 and SFRS1 interacting protein 2
ENST00000463712.6	PC4 and SFRS1 interacting protein 2
ENST00000488797.1	PC4 and SFRS1 interacting protein 2
ENST00000484265.1	PC4 and SFRS1 interacting protein 2
ENST00000380701.8	MANE_select
ENST00000474193.1	novel transcript
ENST00000449575.6	novel protein (FLJ39267)
ENST00000470191.5	novel transcript
ENST00000498725.5	novel transcript
ENST00000486641.2	novel transcript
ENST00000472806.1	novel transcript
ENST00000478913.1	putative novel transcript
ENST00000648575.1	CAGE supported TSS
ENST00000380672.9	CAGE supported TSS
ENST00000380672.9	MANE_select
ENST00000484726.5	novel protein similar to basonuclin (BNC) (FLJ34928)
ENST00000411752.5	novel protein
ENST00000380667.6	Made from mouse cDNA
ENST00000468187.6	novel transcript
ENST00000471301.3	novel transcript
ENST00000430640.1	putative novel transcript
ENST00000439447.1	putative novel transcript
ENST00000450445.1	novel transcript
ENST00000430545.4	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430545.4	CAGE supported TSS
ENST00000430545.4	novel transcript
ENST00000649821.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000456717.1	ribosomal protein S29 (RPS29) pseudogene
ENST00000435405.1	ribosomal protein L31 (RPL31) pseudogene
ENST00000484374.1	novel transcript
ENST00000380647.8	MANE_select
ENST00000461247.1	novel transcript
ENST00000380607.5	MANE_select
ENST00000380607.5	SH3-domain GRB2-like 2 (CNSA2, SH3P4, EEN-B1, SH3D2A)
ENST00000467085.1	SH3-domain GRB2-like 2 (CNSA2, SH3P4, EEN-B1, SH3D2A)
ENST00000428966.1	poly(A)-binding protein pseudogene
ENST00000680146.1	upstream ATG
ENST00000380548.9	MANE_select
ENST00000380548.9	confirm experimentally
ENST00000276935.6	confirm experimentally
ENST00000542621.5	FLJ35283
ENST00000489062.2	FLJ46891
ENST00000443359.1	putative novel transcript
ENST00000649457.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000380534.9	MANE_select
ENST00000380534.9	novel protein similar to mouse RIKEN cDNA 4930500O09 gene
ENST00000380530.1	novel protein similar to mouse RIKEN cDNA 4930500O09 gene
ENST00000441073.1	proteasome (prosome, macropain) 26S subunit, ATPase, 3 (PSMC3) (TBP1) pseudogene
ENST00000380527.3	MANE_select
ENST00000380502.8	MANE_select
ENST00000380502.8	novel protein (FLJ20060) (contains FLJ12902, KIAA1574)
ENST00000380496.5	novel protein (FLJ20060) (contains FLJ12902, KIAA1574)
ENST00000464326.1	adipose differentiation-related protein (ADRP)
ENST00000276914.7	MANE_select
ENST00000276914.7	adipose differentiation-related protein (ADRP)
ENST00000434144.5	adipose differentiation-related protein (ADRP)
ENST00000434144.5	alternative 5' UTR
ENST00000434144.5	alternatively splice 5' UTR, CDS as bA151J10.2.1, but only partial
ENST00000380465.7	adipose differentiation-related protein (ADRP)
ENST00000380464.7	adipose differentiation-related protein (ADRP)
ENST00000475923.1	adipose differentiation-related protein (ADRP)
ENST00000472715.1	adipose differentiation-related protein (ADRP)
ENST00000494753.1	adipose differentiation-related protein (ADRP)
ENST00000397390.3	ribosomal protein S6 (RPS6) pseudogene
ENST00000434457.7	MANE_select
ENST00000417577.2	putative novel transcript
ENST00000380394.9	MANE_select
ENST00000380394.9	ribosomal protein S6
ENST00000498815.1	ribosomal protein S6
ENST00000380384.5	ribosomal protein S6
ENST00000315377.4	ribosomal protein S6
ENST00000380381.3	ribosomal protein S6
ENST00000648238.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000340967.3	MANE_select
ENST00000340967.3	novel protein, possible ortholog of mouse cancer related gene-liver 1(CRG-L1)
ENST00000446114.1	pseudogene similar to part of a novel gene
ENST00000656603.1	Assembled from SLRseq reads (SRP049776)
ENST00000414056.1	survival of motor neuron 1, telomeric (SMN1) pseudogene
ENST00000380338.9	MANE_select
ENST00000469261.5	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3,(AF9)
ENST00000488705.1	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3,(AF9)
ENST00000468513.5	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3,(AF9)
ENST00000491137.5	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3,(AF9)
ENST00000475957.1	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3,(AF9)
ENST00000444895.1	ribosomal protein L7a (RPL7A) pseudogene
ENST00000603695.1	upstream ATG
ENST00000439876.1	putative novel transcript
ENST00000445051.1	putative novel transcript
ENST00000495827.3	MANE_select
ENST00000495827.3	novel protein, possible otholog of mouse RIKEN cDNA 4933428I03 gene
ENST00000488436.1	novel transcript
ENST00000429219.1	interferon, beta 1, fibroblast (IFNB1) pseudogene
ENST00000380232.4	MANE_select
ENST00000380232.4	interferon, beta 1, fibroblast
ENST00000380229.3	interferon, omega 1
ENST00000380225.1	MANE_select
ENST00000380225.1	interferon, alpha 21
ENST00000421715.2	interferon, alpha 4
ENST00000421715.2	protein sequence shows variation to that published in Sw:P05014 with T to A (74) and V to E (137), indicating this is alpha 4A
ENST00000239347.3	MANE_select
ENST00000239347.3	interferon, alpha 7
ENST00000357374.2	MANE_select
ENST00000357374.2	interferon, alpha 10
ENST00000380216.1	MANE_select
ENST00000380216.1	interferon, alpha 16
ENST00000413767.2	MANE_select
ENST00000413767.2	interferon, alpha 17
ENST00000380222.4	MANE_select
ENST00000380222.4	interferon, alpha 14
ENST00000610521.1	interferon, alpha 5
ENST00000359039.5	MANE_select
ENST00000359039.5	novel protein (KIAA1354) (FLJ13568)
ENST00000380210.1	interferon, alpha 6
ENST00000610660.1	interferon, alpha 13
ENST00000380206.4	MANE_select
ENST00000380206.4	interferon, alpha 2
ENST00000380205.2	MANE_select
ENST00000380205.2	interferon, alpha 8
ENST00000669680.1	Assembled from SLRseq reads (SRP049776)
ENST00000276927.3	MANE_select
ENST00000276927.3	interferon, alpha 1
ENST00000654736.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654736.1	Assembled from SLRseq reads (SRP049776)
ENST00000304425.4	Assembled from SLRseq reads (SRP049776)
ENST00000304425.4	novel transcript
ENST00000663833.1	Assembled from SLRseq reads (SRP049776)
ENST00000670459.1	Assembled from SLRseq reads (SRP049776)
ENST00000448696.4	MANE_select
ENST00000644715.2	LR annotation
ENST00000644715.2	MANE_select
ENST00000484957.1	methylthioadenosine phosphorylase (MSAP)
ENST00000616982.1	confirm experimentally
ENST00000624779.1	confirm experimentally
ENST00000304494.10	MANE_select
ENST00000579755.2	NMD exception
ENST00000579755.2	NP_478102.2
ENST00000579755.2	upstream ATG
ENST00000578845.2	alternative 5' UTR
ENST00000530628.2	alternative 3' UTR
ENST00000498124.1	NMD exception
ENST00000498124.1	NP_001182061.1
ENST00000498628.6	alternative 5' UTR
ENST00000380150.2	NMD likely if extended
ENST00000470819.2	cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)
ENST00000652420.1	stolen this variant from RP11-145E5.1-005 (MTAP), since the EST evidence Em:BI860238.1 mapped very well within here and not at the upstream locus MTAP. gdr 17/02/2012
ENST00000428597.6	based on antisense RNA DQ485453
ENST00000658981.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000645223.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000422420.2	gdr reviewed this today (17/02/2012) and updated locus symbol from  CDKN2BAS to CDKN2B-AS1, changed the biotype from Putative transcript to Antisense.  -gdr 17/02/2012
ENST00000422420.2	putative novel transcript-by previous annotator
ENST00000276925.7	CAGE supported TSS
ENST00000276925.7	LR annotation
ENST00000276925.7	MANE_select
ENST00000276925.7	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
ENST00000380142.5	NP_511042
ENST00000380142.5	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
ENST00000399822.2	ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52) (RPL40) pseudogene
ENST00000435092.1	putative novel transcript
ENST00000325870.3	DMRT-like family A1 (DMO)
ENST00000325870.3	MANE_select
ENST00000669551.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664493.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000448570.1	putative novel transcript
ENST00000665427.1	Assembled from SLRseq reads (SRP049776)
ENST00000440888.1	novel transcript
ENST00000380110.8	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) (HUB, HELN1)
ENST00000223951.10	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) (HUB, HELN1)
ENST00000397312.7	MANE_select
ENST00000397312.7	genebuild_only_MANE
ENST00000380117.5	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) (HUB, HELN1)
ENST00000423281.1	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) (HUB, HELN1)
ENST00000440102.1	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) (HUB, HELN1)
ENST00000440102.1	alternative 5' UTR
ENST00000440102.1	alternatively spliced 5' UTR, shares CDS with Em:AL445623.4.1 (partial)
ENST00000440102.1	alternatively spliced 5' UTR, shares CDS with bA31K16.2.1 (partial)
ENST00000462649.1	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) (HUB, HELN1)
ENST00000658911.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423440.2	novel transcript
ENST00000446754.2	putative novel transcript
ENST00000660034.1	Assembled from SLRseq reads (SRP049776)
ENST00000543880.7	MANE_select
ENST00000649380.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000655519.1	Assembled from RACEseq reads
ENST00000358022.5	upstream ATG
ENST00000668254.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663468.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655503.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654259.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665756.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000625030.1	confirm experimentally
ENST00000333916.8	MANE_select
ENST00000333916.8	novel protein (FLJ13657)
ENST00000650615.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000520187.1	not organism-supported
ENST00000495958.5	probable NMD candidate
ENST00000517946.1	not organism-supported
ENST00000397292.8	MANE_select
ENST00000397292.8	phospholipase A2-activating protein (PLAP)
ENST00000520641.1	not organism-supported
ENST00000519968.5	alternative 5' UTR
ENST00000517444.5	alternative 5' UTR
ENST00000648373.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000518614.5	non-canonical donor splice site between exons 5 and 6
ENST00000380062.10	MANE_select
ENST00000380062.10	capillary morphogenesis protein 1(CMG1) (CMG-1, FLJ22621)
ENST00000429045.6	CCDS47955.1
ENST00000429045.6	NP_001092694.1
ENST00000456198.1	putative novel transcript
ENST00000380055.6	MANE_select
ENST00000380036.10	CAGE supported TSS
ENST00000380036.10	MANE_select
ENST00000380032.8	MANE_select
ENST00000380031.2	chromosome 9 open reading frame 11
ENST00000484994.1	chromosome 9 open reading frame 11
ENST00000262244.6	MANE_select
ENST00000262244.6	novel protein (FLJ13204)
ENST00000448858.1	novel transcript
ENST00000657557.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000276943.3	MANE_select
ENST00000380003.8	CAGE supported TSS
ENST00000380003.8	LR annotation
ENST00000380003.8	MANE_select
ENST00000619707.5	alternative 5' UTR
ENST00000619707.5	novel protein
ENST00000488117.5	novel protein
ENST00000379997.7	novel protein (FLJ25077)
ENST00000379995.1	alternative 5' UTR
ENST00000379995.1	alternatively spliced 5' UTR shares CDS with bA27J8.2.3
ENST00000379995.1	novel protein (FLJ25077)
ENST00000379992.6	novel protein (FLJ31810)
ENST00000493941.1	novel protein (FLJ31810)
ENST00000478520.2	novel pseudogene (FLJ37424)
ENST00000657705.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000458047.1	pseudogene similar to part of non-metastatic cells 4, protein expressed in (NME4)
ENST00000438438.2	CMT1A duplicated region transcript 15 (CDRT15) pseudogene
ENST00000434705.1	RNA binding motif protein, X chromosome (RBMX) (HNRPG) pseudogene
ENST00000452970.1	keratin 18 (KRT18) (CYK18, K18) pseudogene
ENST00000411618.1	keratin 18 (KRT18) (CYK18, K18) pseudogene
ENST00000430740.1	ferritin, light polypeptide-like pseudogene
ENST00000427029.1	heat shock cognate 71 KDA protein pseudogene
ENST00000455940.1	pseudogene similar to part of a novel protein (KIAA1688)
ENST00000443540.1	ATPase synthase 6 (MTATP6) pseudogene
ENST00000426425.1	cytochrome c oxidase III (MTCO3) (COIII) pseudogene
ENST00000379923.5	aconitase 1, soluble
ENST00000379923.5	alternative 5' UTR
ENST00000379923.5	alternatively spliced 5' UTR, shares CDS with bA334P12.1.1
ENST00000309951.8	MANE_select
ENST00000309951.8	aconitase 1, soluble
ENST00000379883.3	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide (RIG-I),
ENST00000379883.3	MANE_select
ENST00000681352.1	align_id:1376711|asmbl_96614
ENST00000680733.1	align_id:1376706|asmbl_96609
ENST00000679859.1	align_id:1376710|asmbl_96613
ENST00000681448.1	align_id:3757411|asmbl_247576
ENST00000680883.1	align_id:1376709|asmbl_96612
ENST00000679662.1	align_id:1376712|asmbl_96615
ENST00000360538.7	MANE_select
ENST00000360538.7	tumor protein p53-binding protein (TP53BPL)
ENST00000379858.1	tumor protein p53-binding protein (TP53BPL)
ENST00000425533.1	novel transcript
ENST00000379847.3	NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa (B17)
ENST00000350021.2	NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa (B17)
ENST00000242310.4	MANE_select
ENST00000430787.1	novel transcript
ENST00000413291.1	putative novel transcript
ENST00000424561.1	ribosomal protein S11 (RPS11) pseudogene
ENST00000342743.6	MANE_select
ENST00000448273.1	pseudogene similar to part of membrane guanylyl cyclase
ENST00000424177.1	novel transcript
ENST00000379825.7	NP_778239.1
ENST00000379825.7	upstream ATG
ENST00000397172.8	upstream ATG
ENST00000379817.7	LR annotation
ENST00000379817.7	MANE_select
ENST00000379817.7	alternative 5' UTR
ENST00000379817.7	upstream ATG
ENST00000436040.7	alternative 5' UTR
ENST00000379819.6	alternative 5' UTR
ENST00000476858.6	upstream ATG
ENST00000468275.6	alternative 5' UTR
ENST00000478279.6	upstream ATG
ENST00000418151.1	novel pseudogene
ENST00000452496.1	argininosuccinate synthetase (ASS) (CTLN1) pseudogene
ENST00000415066.1	transcription elongation factor A (SII), 1 pseudogene (GTF2SP)
ENST00000425356.1	cancer/testis antigen 1 (CTAG1) (LAGE2B) pseudogene
ENST00000330899.5	MANE_select
ENST00000495015.5	DnaJ (Hsp40) homolog, subfamily A, member 1
ENST00000465677.1	DnaJ (Hsp40) homolog, subfamily A, member 1
ENST00000397149.4	MANE_select
ENST00000379731.5	MANE_select
ENST00000379731.5	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 (GGTB2)
ENST00000654325.1	Assembled from SLRseq reads (SRP049776)
ENST00000654325.1	putative novel transcript
ENST00000426270.5	putative novel transcript
ENST00000442432.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000379725.5	serine protease inhibitor, Kazal type 4 (PEC-60)
ENST00000379721.4	MANE_select
ENST00000379721.4	serine protease inhibitor, Kazal type 4 (PEC-60)
ENST00000493917.5	BCL2-associated athanogene
ENST00000634734.3	MANE_select
ENST00000379704.7	upstream uORF
ENST00000379707.7	upstream uORF
ENST00000473781.1	upstream uORF
ENST00000635077.1	upstream uORF
ENST00000488499.1	upstream uORF
ENST00000223500.9	MANE_select
ENST00000487080.1	novel transcript
ENST00000379521.8	nuclear transcription factor, X-box binding 1
ENST00000379540.8	MANE_select
ENST00000379540.8	nuclear transcription factor, X-box binding 1
ENST00000466359.1	nuclear transcription factor, X-box binding 1
ENST00000466971.1	nuclear transcription factor, X-box binding 1
ENST00000463421.1	nuclear transcription factor, X-box binding 1
ENST00000379507.7	aquaporin 7
ENST00000297988.6	MANE_select
ENST00000297988.6	aquaporin 7
ENST00000377425.8	aquaporin 7
ENST00000439678.5	aquaporin 7
ENST00000379506.7	aquaporin 7
ENST00000379503.7	aquaporin 7
ENST00000625032.1	alternative 5' UTR
ENST00000661480.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657938.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664119.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653159.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654973.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664487.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000297991.6	MANE_select
ENST00000645858.1	NP_001305073.1
ENST00000473153.1	aquaporin 3
ENST00000297990.9	MANE_select
ENST00000290943.10	KIAA2015
ENST00000290943.10	QC splicing correct
ENST00000496561.2	QC splicing correct
ENST00000484634.1	novel protein similar to KIAA1074
ENST00000605687.1	NAGNAG splice site
ENST00000357927.7	KIAA1074
ENST00000357927.7	QC splicing correct
ENST00000426460.2	QC splicing correct
ENST00000657092.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671504.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659752.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659752.1	QC splicing correct
ENST00000602933.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664899.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669639.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658100.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000379435.3	QC splicing correct
ENST00000379435.3	TRBV20/OR9-2*01 allele
ENST00000379435.3	novel immunoglobulin domain containing protein
ENST00000331828.4	TRBV21/OR9-2*01 allele
ENST00000390389.3	TRBV23/OR9-2*01 allele
ENST00000416632.1	TRBV24/OR9-2*03 allele which is a pseudogene
ENST00000438417.2	T cell receptor beta variable 25/OR9-2
ENST00000438417.2	TRBV25/OR9-2*01
ENST00000667245.1	Assembled from SLRseq reads (SRP049776)
ENST00000667902.1	Assembled from SLRseq reads (SRP049776)
ENST00000432077.2	P
ENST00000432077.2	TRBV26/OR9-2*02
ENST00000666784.1	Assembled from RACEseq reads
ENST00000654908.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000468152.2	protease, serine, 3 (mesotrypsin)
ENST00000361005.10	CAGE supported TSS
ENST00000361005.10	protease, serine, 3 (mesotrypsin)
ENST00000361005.10	upstream ATG
ENST00000342836.9	protease, serine, 3 (mesotrypsin)
ENST00000379405.4	protease, serine, 3 (mesotrypsin)
ENST00000477653.2	protease, serine, 3 (mesotrypsin)
ENST00000495682.1	protease, serine, 3 (mesotrypsin)
ENST00000669609.1	Assembled from SLRseq reads (SRP049776)
ENST00000668091.1	Assembled from SLRseq reads (SRP049776)
ENST00000263228.4	MANE_select
ENST00000263228.4	Ubiquitin-conjugating enzyme (UBC3B)
ENST00000379238.7	MANE_select
ENST00000421278.2	not organism-supported
ENST00000361264.9	MANE_select
ENST00000466402.1	putative novel transcript
ENST00000396990.6	novel protein
ENST00000450964.1	novel protein
ENST00000463286.1	novel transcript
ENST00000297661.9	MANE_select
ENST00000359544.2	alternative 5' UTR
ENST00000439099.1	ribosomal protein L35A (RPL35A) pseudogene
ENST00000372214.3	ribosomal protein S8 (RPS8) pseudogene
ENST00000346365.8	alternative 5' UTR
ENST00000346365.8	alternatively spliced 5' UTR; shares CDS with bA573M23.1.1, bA573M23.1.3 and bA573M23.1.4
ENST00000346365.8	nudix (nucleoside diphosphate linked moiety X)-type motif 2 (APAH1)
ENST00000379155.9	alternative 5' UTR
ENST00000379155.9	alternatively spliced 5' UTR; shares CDS with bA573M23.1.1, bA573M23.1.2 and bA573M23.1.4
ENST00000379155.9	nudix (nucleoside diphosphate linked moiety X)-type motif 2 (APAH1)
ENST00000379158.7	MANE_select
ENST00000379158.7	alternative 5' UTR
ENST00000379158.7	alternatively spliced 5' UTR; shares CDS with objects bA573M23.1.2 to bA573M23.1.4
ENST00000379158.7	nudix (nucleoside diphosphate linked moiety X)-type motif 2 (APAH1)
ENST00000297625.8	MANE_select
ENST00000297625.8	NP_065753.2
ENST00000379142.3	novel glycoprotein
ENST00000297623.7	MANE_select
ENST00000379089.5	chromosome 9 open reading frame 25 (FLJ39031)
ENST00000379087.5	chromosome 9 open reading frame 25 (FLJ39031)
ENST00000379084.5	chromosome 9 open reading frame 25 (FLJ39031)
ENST00000379081.5	chromosome 9 open reading frame 25 (FLJ39031)
ENST00000379080.5	chromosome 9 open reading frame 25 (FLJ39031)
ENST00000651358.1	MANE_select
ENST00000651358.1	genebuild_only_MANE
ENST00000422409.5	chromosome 9 open reading frame 25 (FLJ39031)
ENST00000379078.1	chromosome 9 open reading frame 25 (FLJ39031)
ENST00000470982.5	dynein, axonemal, intermediate polypeptide 1 (ICS, PCD, CILD1, dynein, axonemal, intermediate chain 1)
ENST00000470982.5	this variant fragment and one or more of variant fragments bA296L22.2.5 to bA296L22.2.8 could be part of a single variant
ENST00000242317.9	MANE_select
ENST00000242317.9	dynein, axonemal, intermediate polypeptide 1 (ICS, PCD, CILD1, dynein, axonemal, intermediate chain 1)
ENST00000437363.5	dynein, axonemal, intermediate polypeptide 1 (ICS, PCD, CILD1, dynein, axonemal, intermediate chain 1)
ENST00000437363.5	this variant fragment and one or more of variant fragments bA296L22.2.5 to bA296L22.2.7 could be part of a single variant
ENST00000488369.1	dynein, axonemal, intermediate polypeptide 1 (ICS, PCD, CILD1, dynein, axonemal, intermediate chain 1)
ENST00000488369.1	this variant fragment and one or more of variant fragments bA296L22.2.5 to bA296L22.2.7 could be part of a single variant
ENST00000488790.1	dynein, axonemal, intermediate polypeptide 1 (ICS, PCD, CILD1, dynein, axonemal, intermediate chain 1)
ENST00000488790.1	this variant fragment and one or more of variant fragments bA296L22.2.3 or bA296L22.2.5 to bA296L22.2.7 could be part of a single variant
ENST00000470169.5	dynein, axonemal, intermediate polypeptide 1 (ICS, PCD, CILD1, dynein, axonemal, intermediate chain 1)
ENST00000470169.5	this variant fragment and one or more of variant fragments bA296L22.2.8 or bA296L22.2.2 to bA296L22.2.4 could be part of a single variant
ENST00000442556.1	dynein, axonemal, intermediate polypeptide 1 (ICS, PCD, CILD1, dynein, axonemal, intermediate chain 1)
ENST00000442556.1	this variant fragment and one or more of variant fragments bA296L22.2.8 or bA296L22.2.2 to bA296L22.2.4 could be part of a single variant
ENST00000485580.1	dynein, axonemal, intermediate polypeptide 1 (ICS, PCD, CILD1, dynein, axonemal, intermediate chain 1)
ENST00000485580.1	this variant fragment and one or more of variant fragments bA296L22.2.8 or bA296L22.2.2 to bA296L22.2.4 could be part of a single variant
ENST00000399775.3	MANE_select
ENST00000351266.8	alternative 5' UTR
ENST00000351266.8	alternatively spliced 5' UTR; shares CDS with bA296L22.3.1
ENST00000351266.8	ciliary neurotrophic factor receptor
ENST00000378980.8	MANE_select
ENST00000378980.8	alternative 5' UTR
ENST00000378980.8	alternatively spliced 5' UTR; shares CDS with bA296L22.3.2
ENST00000378980.8	ciliary neurotrophic factor receptor
ENST00000417345.2	alternative 5' UTR
ENST00000417345.2	alternatively spliced 5' UTR; shares partial CDS with bA296L22.3.1 and bA296L22.3.2
ENST00000417345.2	ciliary neurotrophic factor receptor
ENST00000656721.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668957.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670893.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662777.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000454187.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666375.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668876.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657464.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000378959.9	MANE_select
ENST00000472418.5	dynactin 3 (p22)
ENST00000259632.12	MANE_select
ENST00000259632.12	dynactin 3 (p22)
ENST00000479399.5	dynactin 3 (p22)
ENST00000421919.5	dynactin 3 (p22)
ENST00000341694.6	dynactin 3 (p22)
ENST00000477738.6	dynactin 3 (p22)
ENST00000481438.1	dynactin 3 (p22)
ENST00000472074.1	dynactin 3 (p22)
ENST00000378913.6	dynactin 3 (p22)
ENST00000378911.3	dynactin 3 (p22)
ENST00000378892.5	sigma receptor (SR31747 binding protein 1)
ENST00000353468.4	sigma receptor (SR31747 binding protein 1)
ENST00000277010.9	MANE_select
ENST00000277010.9	sigma receptor (SR31747 binding protein 1)
ENST00000497006.2	align_id:3757790|asmbl_247955
ENST00000497006.2	sigma receptor (SR31747 binding protein 1)
ENST00000680104.1	align_id:3757968|asmbl_248133
ENST00000681409.1	align_id:3757917|asmbl_248082
ENST00000680730.1	align_id:3757979|asmbl_248144
ENST00000461426.1	sigma receptor (SR31747 binding protein 1)
ENST00000478146.1	sigma receptor (SR31747 binding protein 1)
ENST00000378842.8	MANE_select
ENST00000554638.5	galactose-1-phosphate uridylytransferase
ENST00000555003.5	alternative 5' UTR
ENST00000441545.7	MANE_select
ENST00000441545.7	alternative 5' UTR
ENST00000556792.5	alternative 5' UTR
ENST00000556531.5	alternative 5' UTR
ENST00000555981.5	alternative 5' UTR
ENST00000478802.2	not organism-supported
ENST00000466082.1	interleukin 11 receptor, alpha
ENST00000259631.5	MANE_select
ENST00000421828.7	MANE_select
ENST00000654838.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000311925.7	MANE_select
ENST00000311925.7	small inducible cytokine subfamily A (Cys-Cys), member 19
ENST00000485502.1	small inducible cytokine subfamily A (Cys-Cys), member 19
ENST00000378800.3	small inducible cytokine subfamily A (Cys-Cys), member 19
ENST00000664167.1	Assembled from SLRseq reads (SRP049776)
ENST00000259607.7	MANE_select
ENST00000259607.7	small iducible cytokine subfamily A (Cys-Cys), member 21
ENST00000378792.1	small iducible cytokine subfamily A (Cys-Cys), member 21
ENST00000378788.4	MANE_select
ENST00000658462.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000340783.11	MANE_select
ENST00000476115.2	novel protein (KIAA1045)
ENST00000242315.3	novel protein (KIAA1045)
ENST00000453597.8	DnaJ (Hsp40) homolog, subfamily B, member 5 (Hsc40)
ENST00000453597.8	upstream ATG
ENST00000312316.9	CAGE supported TSS
ENST00000312316.9	DnaJ (Hsp40) homolog, subfamily B, member 5 (Hcs40)
ENST00000537321.5	CAGE supported TSS
ENST00000469798.5	DnaJ (Hsp40) homolog, subfamily B, member 5 (Hcs40)
ENST00000541010.5	alternative 5' UTR
ENST00000454002.6	DnaJ (Hsp40) homolog, subfamily B, member 5 (Hcs40)
ENST00000454002.6	NP_001128477.1
ENST00000443266.2	DnaJ (Hsp40) homolog, subfamily B, member 5 (Hcs40)
ENST00000443266.2	alternative 5' UTR
ENST00000623595.1	confirm experimentally
ENST00000662507.1	Assembled from SLRseq reads (SRP049776)
ENST00000668332.1	Assembled from RACEseq reads
ENST00000354479.5	NP_001035501.1
ENST00000354479.5	confirm experimentally
ENST00000421362.6	NP_001035502.1
ENST00000421362.6	confirm experimentally
ENST00000312292.6	MANE_select
ENST00000678650.1	Snaptron_GTEX
ENST00000678650.1	alternative 5' UTR
ENST00000678650.1	intropolis_filtered
ENST00000678650.1	slrseq_align_id:3757998|asmbl_248163_PASA_cluster_21986
ENST00000678018.1	Snaptron_GTEX_
ENST00000678018.1	intropolis_filtered
ENST00000678018.1	slrseq_align_id:3758000|asmbl_248165_PASA_cluster_21986
ENST00000679800.1	Snaptron_GTEX
ENST00000679800.1	intropolis_filtered
ENST00000679800.1	slrseq_align_id:3758014|asmbl_248179_PASA_cluster_21986
ENST00000677257.1	intropolis_filtered
ENST00000677257.1	slrseq_align_id:3757999|asmbl_248164_PASA_cluster_21986
ENST00000678465.1	SLR-seq_HsBN_lib10
ENST00000681537.1	intropolis_filtered
ENST00000358901.11	MANE_select
ENST00000448530.6	slr-seq_hsbn_lib6
ENST00000679647.1	SLR-seq_HsBN_lib8
ENST00000679647.1	intropolis_filtered
ENST00000681335.1	SLR-seq_HsBN_lib8
ENST00000417448.2	SLR-seq_HsBN_lib8
ENST00000417448.2	alternative 5' UTR
ENST00000680916.1	SLR-seq_HsBN_lib10
ENST00000679599.1	SLR-seq_TB0000032
ENST00000679862.1	SLR-seq_HsBN_lib8
ENST00000679862.1	Snaptron_GTEX
ENST00000679862.1	intropolis_filtered
ENST00000681690.1	SLR-seq_HsBN_lib12
ENST00000679204.2	SLR-seq_HsBN_lib9
ENST00000676836.2	SLR-seq_TB0000033
ENST00000479300.2	pacbio_capture_seq_hsTestes
ENST00000480327.2	SLR-seq_HsBN_lib10
ENST00000681125.1	Snaptron_GTEX
ENST00000681125.1	intropolis_filtered
ENST00000680520.1	Snaptron_GTEX
ENST00000680520.1	intropolis_filtered
ENST00000681789.1	intropolis_filtered
ENST00000680731.1	Snaptron_GTEX_
ENST00000680731.1	intropolis_filtered
ENST00000681562.1	Snaptron_GTEX
ENST00000681562.1	intropolis_filtered
ENST00000680079.1	Snaptron_GTEX
ENST00000680079.1	intropolis_filtered
ENST00000679449.1	Snaptron_GTEX_
ENST00000679449.1	intropolis_filtered
ENST00000680900.1	Snaptron_GTEX
ENST00000680900.1	intropolis_filtered
ENST00000681386.1	Snaptron_GTEX
ENST00000681386.1	alternative 5' UTR
ENST00000681386.1	intropolis_filtered
ENST00000679901.1	intropolis_filtered
ENST00000679392.1	Snaptron_GTEX
ENST00000679392.1	intropolis_filtered
ENST00000680575.1	Snaptron_GTEX
ENST00000680575.1	intropolis_filtered
ENST00000680108.1	Snaptron_GTEX
ENST00000680108.1	intropolis_filtered
ENST00000378643.8	MANE_select
ENST00000448890.1	alternative 5' UTR
ENST00000298004.9	phosphatidylinositol glycan class O (PIGO)
ENST00000378617.4	MANE_select
ENST00000378617.4	phosphatidylinositol glycan class O (PIGO)
ENST00000472208.1	novel transcript
ENST00000431804.1	putative novel transcript
ENST00000356493.10	MANE_select
ENST00000356493.10	stomatin (EPB72)-like 2 (SLP-2)
ENST00000488050.1	stomatin (EPB72)-like 2 (SLP-2)
ENST00000487490.1	stomatin (EPB72)-like 2 (SLP-2)
ENST00000378566.5	novel protein (KIAA1539) (FLJ11560)
ENST00000322813.10	MANE_select
ENST00000322813.10	alternative 5' UTR
ENST00000322813.10	alternatively spliced 5' UTR, shares CDS with bA182N22.6.1
ENST00000322813.10	novel protein (KIAA1539) (FLJ11560)
ENST00000488109.6	alternative 5' UTR
ENST00000605244.5	alternative 5' UTR
ENST00000378561.5	novel protein (KIAA1539) (FLJ11560)
ENST00000378557.1	alternative 5' UTR
ENST00000378557.1	alternatively spliced 5' UTR, shares CDS with bA182N22.6.1
ENST00000378557.1	novel protein (KIAA1539) (FLJ11560)
ENST00000396787.5	unc-13-like (C. elegans) (MUNC13, hmunc13)
ENST00000396787.5	unc-13-like (C. elegans) (hmunc13)
ENST00000485086.1	unc-13-like (C. elegans) (MUNC13, hmunc13)
ENST00000637271.1	CAGE supported TSS
ENST00000636694.1	CAGE supported TSS
ENST00000481299.1	unc-13-like (C. elegans) (MUNC13, hmunc13)
ENST00000430846.5	novel transcript
ENST00000329395.12	novel transcript
ENST00000650605.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000434138.1	protein associated with PRK1 (AWP1) pseudogene
ENST00000361226.8	MANE_select
ENST00000361226.8	novel protein (KIAA0375)
ENST00000468041.1	novel transcript
ENST00000660258.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000450395.1	ribosomal protein L36a (L44L, RPL44) (RPL36A) pseudogene
ENST00000492890.5	novel transcript
ENST00000399742.7	MANE_select
ENST00000480287.1	novel transcript
ENST00000478246.1	novel transcript
ENST00000430795.1	ribosomal protein S29 (RPS29) pseudogene
ENST00000336395.6	MANE_select
ENST00000336395.6	testis-specific kinase 1
ENST00000498522.5	testis-specific kinase 1
ENST00000467424.5	testis-specific kinase 1
ENST00000463897.1	testis-specific kinase 1
ENST00000480077.2	testis-specific kinase 1
ENST00000259633.9	CD72 antigen (LYB2)
ENST00000259633.9	MANE_select
ENST00000490239.5	CD72 antigen (LYB2)
ENST00000463720.5	CD72 antigen (LYB2)
ENST00000477364.5	CD72 antigen (LYB2)
ENST00000378431.5	CD72 antigen (LYB2)
ENST00000470387.5	CD72 antigen (LYB2)
ENST00000465754.6	CD72 antigen (LYB2)
ENST00000482121.1	CD72 antigen (LYB2)
ENST00000378430.3	CD72 antigen (LYB2)
ENST00000457044.1	putative novel transcript
ENST00000428948.1	putative novel transcript
ENST00000259608.8	MANE_select
ENST00000259608.8	SHP2 interacting transmembrane adaptor (SIT)
ENST00000486859.5	SHP2 interacting transmembrane adaptor (SIT)
ENST00000474403.1	SHP2 interacting transmembrane adaptor (SIT)
ENST00000426546.7	MANE_select
ENST00000426546.7	novel protein (MGC31967)
ENST00000378407.7	novel protein (MGC31967)
ENST00000378406.5	novel protein (MGC31967)
ENST00000327351.6	novel protein (MGC31967)
ENST00000421582.2	novel protein (MGC31967)
ENST00000490638.5	novel protein (FLJ14642)
ENST00000475323.5	novel protein (FLJ14642)
ENST00000378387.4	MANE_select
ENST00000378387.4	novel protein (FLJ14642)
ENST00000490970.5	novel transcript
ENST00000488918.2	novel transcript
ENST00000468876.1	novel transcript
ENST00000378357.9	MANE_select
ENST00000378357.9	carbonic anhydrase IX (MN)
ENST00000493245.1	carbonic anhydrase IX (MN)
ENST00000485665.1	carbonic anhydrase IX (MN)
ENST00000378292.9	LR annotation
ENST00000329305.6	NP_001288155
ENST00000645482.3	CAGE supported TSS
ENST00000645482.3	LR annotation
ENST00000645482.3	MANE_select
ENST00000471212.5	tropomyosin 2 (beta) (DA1, TMSB, AMCD1)
ENST00000486018.1	tropomyosin 2 (beta) (DA1, TMSB, AMCD1)
ENST00000314888.10	MANE_select
ENST00000489255.2	talin 1 (TLN, KIAA1027)
ENST00000464379.5	talin 1 (TLN, KIAA1027)
ENST00000486788.2	talin 1 (TLN, KIAA1027)
ENST00000495712.1	talin 1
ENST00000486056.1	cAMP responsive element binding protein 3 (luman) (LZIP, LUMAN, MGC15333, MGC19782)
ENST00000353704.3	MANE_select
ENST00000353704.3	cAMP responsive element binding protein 3 (luman) (LZIP, LUMAN, MGC15333, MGC19782)
ENST00000378103.7	MANE_select
ENST00000378103.7	glucosidase, beta (bile acid) 2 (AD035, KIAA1605, MGC16895, DKFZp762K054)
ENST00000378088.1	glucosidase, beta (bile acid) 2 (AD035, KIAA1605, MGC16895, DKFZp762K054)
ENST00000378094.4	glucosidase, beta (bile acid) 2 (AD035, KIAA1605, MGC16895, DKFZp762K054)
ENST00000467252.5	glucosidase, beta (bile acid) 2 (AD035, KIAA1605, MGC16895, DKFZp762K054)
ENST00000486797.1	glucosidase, beta (bile acid) 2 (AD035, KIAA1605, MGC16895, DKFZp762K054)
ENST00000488292.1	glucosidase, beta (bile acid) 2 (AD035, KIAA1605, MGC16895, DKFZp762K054)
ENST00000485259.1	glucosidase, beta (bile acid) 2 (AD035, KIAA1605, MGC16895, DKFZp762K054)
ENST00000489025.1	glucosidase, beta (bile acid) 2
ENST00000378078.5	MANE_select
ENST00000436428.3	MANE_select
ENST00000414286.1	putative novel transcript
ENST00000425499.2	non canonical TEC
ENST00000425499.2	putative novel transcript
ENST00000658413.1	Assembled from SLRseq reads (SRP049776)
ENST00000666249.1	Assembled from SLRseq reads (SRP049776)
ENST00000658963.1	Assembled from SLRseq reads (SRP049776)
ENST00000342694.7	MANE_select
ENST00000447210.5	non canonical TEC
ENST00000447210.5	non canonical polymorphism
ENST00000340291.6	NP_758516.1
ENST00000489063.1	sperm associated antigen 8 (SMP1, BS-84, HSD-1, hSMP-1, MGC26201)
ENST00000396638.7	MANE_select
ENST00000396638.7	NP_001034681.1
ENST00000490578.1	Histidine triad nucleotide binding protein 2
ENST00000472085.5	Histidine triad nucleotide binding protein 2
ENST00000259667.6	Histidine triad nucleotide binding protein 2
ENST00000259667.6	MANE_select
ENST00000474908.5	Histidine triad nucleotide binding protein 2
ENST00000474848.6	Histidine triad nucleotide binding protein 2
ENST00000471774.5	Histidine triad nucleotide binding protein 2
ENST00000461169.1	Histidine triad nucleotide binding protein 2
ENST00000650284.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000650284.1	ID: align_id:1377076|asmbl_96979
ENST00000643932.2	MANE_select
ENST00000464519.6	NAG-5 protein (LOC51754)
ENST00000473947.1	NAG-5 protein (LOC51754)
ENST00000490199.2	NAG-5 protein (LOC51754)
ENST00000423537.7	MANE_select
ENST00000377984.2	alternative 5' UTR
ENST00000472182.1	alternative 5' UTR
ENST00000354323.3	MANE_select
ENST00000443779.3	CAGE supported TSS
ENST00000443779.3	MANE_select
ENST00000443779.3	upstream ATG
ENST00000636776.1	upstream ATG
ENST00000650257.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000433838.1	putative novel transcript
ENST00000668812.1	Assembled from SLRseq reads (SRP049776)
ENST00000341959.2	MANE_select
ENST00000647905.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000377966.4	MANE_select
ENST00000377966.4	reversion-inducing-cysteine-rich protein with kazal motifs (ST15, hRECK)
ENST00000475774.5	reversion-inducing-cysteine-rich protein with kazal motifs (ST15, hRECK)
ENST00000479053.1	reversion-inducing-cysteine-rich protein with kazal motifs (ST15, hRECK)
ENST00000377960.9	MANE_select
ENST00000377960.9	chromosome 9 open reading frame 19 (GAPR-1, GLIPR2)
ENST00000377959.5	chromosome 9 open reading frame 19 (GAPR-1, GLIPR2)
ENST00000474050.1	chromosome 9 open reading frame 19 (GAPR-1, GLIPR2)
ENST00000335119.4	MANE_select
ENST00000335119.4	calicin
ENST00000345519.10	MANE_select
ENST00000345519.10	clathrin, light polypeptide (LCA)
ENST00000242285.10	clathrin, light polypeptide (LCA)
ENST00000642385.2	LR annotation
ENST00000642385.2	MANE_select
ENST00000396594.8	NP_001121699.1
ENST00000543356.7	upstream ATG
ENST00000433260.1	high-mobility group box pseudogene
ENST00000353739.8	ring finger protein 38
ENST00000259605.11	MANE_select
ENST00000259605.11	ring finger protein 38
ENST00000491349.5	ring finger protein 38
ENST00000484621.1	ring finger protein 38
ENST00000488058.1	ring finger protein 38
ENST00000298048.7	MANE_select
ENST00000489766.5	maternal embryonic leucine zipper kinase (KIAA0175)
ENST00000480021.1	maternal embryonic leucine zipper kinase (KIAA0175)
ENST00000657370.1	Assembled from SLRseq reads (SRP049776)
ENST00000656722.1	Assembled from SLRseq reads (SRP049776)
ENST00000670495.1	Assembled from SLRseq reads (SRP049776)
ENST00000658385.1	Assembled from SLRseq reads (SRP049776)
ENST00000669987.1	Assembled from SLRseq reads (SRP049776)
ENST00000358127.9	LR annotation
ENST00000358127.9	MANE_select
ENST00000377852.7	LR annotation
ENST00000523241.6	LR annotation
ENST00000651550.1	alternative 5' UTR
ENST00000354277.4	ribosomal protein L32 (RPL32) pseudogene
ENST00000426358.1	putative novel transcript
ENST00000664037.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660341.1	Assembled from SLRseq reads (SRP049776)
ENST00000662098.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666604.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653711.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656197.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664382.1	Assembled from SLRseq reads (SRP049776)
ENST00000658888.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658888.1	Assembled from SLRseq reads (SRP049776)
ENST00000653587.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664088.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665375.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000629870.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657640.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000625218.1	novel transcript
ENST00000654889.1	Assembled from SLRseq reads (SRP049776)
ENST00000656730.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426946.2	putative novel transcript
ENST00000654436.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669016.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000336755.10	MANE_select
ENST00000336755.10	novel protein (FLJ22611)
ENST00000322831.6	novel protein (FLJ22611)
ENST00000461038.5	novel transcript
ENST00000488607.5	novel transcript
ENST00000463625.6	QC splicing correct
ENST00000463625.6	novel transcript
ENST00000497924.5	novel transcript
ENST00000481507.5	novel transcript
ENST00000496099.1	novel transcript
ENST00000452923.1	putative novel transcript
ENST00000493368.5	glyoxylate reductase/hydroxypyruvate reductase
ENST00000460882.5	glyoxylate reductase/hydroxypyruvate reductase
ENST00000318158.11	MANE_select
ENST00000487399.5	glyoxylate reductase/hydroxypyruvate reductase
ENST00000491488.5	glyoxylate reductase/hydroxypyruvate reductase
ENST00000494290.1	QC splicing correct
ENST00000482603.1	glyoxylate reductase/hydroxypyruvate reductase
ENST00000512404.2	putative novel transcript
ENST00000307750.5	MANE_select
ENST00000307750.5	novel protein (KIAA0354)
ENST00000377798.9	MANE_select
ENST00000377798.9	RNA polymerase I associated factor 53 (FLJ13390, FLJ13970)(PAF53)
ENST00000377792.3	RNA polymerase I associated factor 53 (FLJ13390, FLJ13970)(PAF53)
ENST00000422509.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000413915.1	putative novel transcript
ENST00000432825.7	F-box only protein 10 (FBX10)
ENST00000432825.7	MANE_select
ENST00000432825.7	QC splicing correct
ENST00000276960.7	not organism-supported
ENST00000541607.1	alternative 5' UTR
ENST00000321301.7	MANE_select
ENST00000377773.9	NP_001127957.1
ENST00000544379.1	NP_001127956.1
ENST00000377765.8	MANE_select
ENST00000539465.5	alternative 5' UTR
ENST00000359927.3	alternative 5' UTR
ENST00000297994.4	MANE_select
ENST00000488673.6	novel transcript
ENST00000377754.6	novel protein (FLJ31455)
ENST00000327304.10	MANE_select
ENST00000396521.3	NP_001002269.1
ENST00000377724.8	MANE_select
ENST00000461549.1	novel protein (MGC10765,FLJ23201)
ENST00000483167.5	novel transcript (MGC10765)
ENST00000478453.1	novel protein (MGC10765,FLJ23201)
ENST00000496760.5	FLJ40866
ENST00000496760.5	novel transcript
ENST00000377716.6	alternative 5' UTR
ENST00000242275.7	MANE_select
ENST00000377707.4	MANE_select
ENST00000377707.4	SHB (Src homology 2 domain containing) adaptor protein B
ENST00000422554.2	non-canonical donor splice site at 3rd exon
ENST00000422554.2	putative novel transcript
ENST00000377698.4	MANE_select
ENST00000377698.4	novel protein similar to aldehyde dehydrogenase 1 family, member B1 (ALDH5, ALDHX, MGC2230) (ALDH1B1)
ENST00000377698.4	overlapping uORF
ENST00000635162.1	alternative 5' UTR
ENST00000377694.2	MANE_select
ENST00000377694.2	novel protein, possible ortholog of mouse  insulin-like growth factor binding protein 7 (IGFBP7)
ENST00000448149.1	FKSG83 pseudogene
ENST00000636756.1	NMD likely if extended
ENST00000399703.6	MANE_select
ENST00000475234.1	novel transcript
ENST00000667135.1	Assembled from SLRseq reads (SRP049776)
ENST00000665533.1	Assembled from SLRseq reads (SRP049776)
ENST00000637691.1	alternative 5' UTR
ENST00000444791.2	putative novel transcript
ENST00000660743.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000493965.5	novel transcript
ENST00000477002.1	novel transcript
ENST00000358144.6	cell recognition molecule CASPR3 (FLJ14195, KIAA1714)
ENST00000483502.2	novel transcript
ENST00000448573.2	QC splicing correct
ENST00000448573.2	novel transcript
ENST00000443583.6	QC splicing correct
ENST00000443583.6	cell recognition molecule CASPR3 (FLJ14195, KIAA1714)
ENST00000495573.2	novel transcript
ENST00000377659.1	cell recognition molecule CASPR3 (FLJ14195, KIAA1714)
ENST00000469061.1	QC splicing correct
ENST00000469061.1	novel transcript
ENST00000377653.2	cell recognition molecule CASPR3 (FLJ14195, KIAA1714)
ENST00000377647.6	MANE_select
ENST00000427327.1	QC splicing correct
ENST00000423499.3	QC splicing correct
ENST00000423634.1	S-phase kinase-associated protein 1A (p19A) (OCP2, SKP1, EMC19, OCP-II, TCEB1L) (SKP1A) pseudogene
ENST00000613652.1	not best-in-genome evidence
ENST00000661838.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000621296.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000619925.4	alternative 5' UTR
ENST00000621410.4	align_id:3758748|asmbl_248913
ENST00000621410.4	alternative 5' UTR
ENST00000621015.4	alternative 5' UTR
ENST00000619435.1	alternative 5' UTR
ENST00000427006.2	not best-in-genome evidence
ENST00000670022.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656945.1	Assembled from SLRseq reads (SRP049776)
ENST00000665892.1	Assembled from SLRseq reads (SRP049776)
ENST00000663590.1	Assembled from SLRseq reads (SRP049776)
ENST00000666618.1	Assembled from SLRseq reads (SRP049776)
ENST00000657066.1	Assembled from SLRseq reads (SRP049776)
ENST00000666906.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667968.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660231.1	Assembled from SLRseq reads (SRP049776)
ENST00000627065.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000627065.2	Assembled from SLRseq reads (SRP049776)
ENST00000670314.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000450520.1	Looks a bit of an unlikely translation (but no stop codons) as splicing after the stop codon and also over a large repeat area.
ENST00000455995.5	The translation in Tr:Q6ZUA7 looks unlikely so not used
ENST00000467192.2	Non-canonical donor splice site at exon 7
ENST00000467192.2	SNP rs1055862 AT>GT
ENST00000467192.2	non canonical polymorphism
ENST00000496146.2	Non-canonical donor splice site at exon 6
ENST00000496146.2	SNP rs1055862 - AT > GT
ENST00000496146.2	non canonical polymorphism
ENST00000494538.2	Non-canonical dodor splice site at exon 7
ENST00000494538.2	SNP rs1055862 AT>GT
ENST00000494538.2	non canonical polymorphism
ENST00000454768.3	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000454768.3	ID: align_id:1377277|asmbl_97180
ENST00000454768.3	pacbio_capture_seq_hsUndeter : m150424_203641_42137_c100813372550000001823175210081565_s1_p0_116437_ccs ;
ENST00000428759.2	Unprocessed pseudogene, see reference PMID:11952783
ENST00000417703.1	Translation from Tr:Q96LT0 looks unlikely
ENST00000417703.1	non canonical TEC
ENST00000344538.4	non canonical TEC
ENST00000450911.2	not best-in-genome evidence
ENST00000496386.1	QC splicing correct
ENST00000484254.1	QC splicing correct
ENST00000467854.1	QC splicing correct
ENST00000439824.2	Possible duplication of RP11-475I24.8-001
ENST00000439824.2	QC splicing correct
ENST00000425493.1	Possible duplication of RP11-175I6.5-001
ENST00000419207.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000377548.2	Alternatively spliced 5' UTR, shares CDS with RP11-160N1.10-001
ENST00000377548.2	alternative 5' UTR
ENST00000653087.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660875.1	Assembled from SLRseq reads (SRP049776)
ENST00000670686.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656580.1	Assembled from SLRseq reads (SRP049776)
ENST00000653988.1	Assembled from SLRseq reads (SRP049776)
ENST00000668789.1	Assembled from SLRseq reads (SRP049776)
ENST00000443347.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669872.1	Assembled from SLRseq reads (SRP049776)
ENST00000657353.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671566.1	Assembled from SLRseq reads (SRP049776)
ENST00000669747.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669747.1	Assembled from SLRseq reads (SRP049776)
ENST00000662964.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656926.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653460.1	Assembled from SLRseq reads (SRP049776)
ENST00000655025.1	Assembled from SLRseq reads (SRP049776)
ENST00000655049.1	Assembled from SLRseq reads (SRP049776)
ENST00000659299.1	Assembled from SLRseq reads (SRP049776)
ENST00000654178.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446626.2	QC splicing correct
ENST00000420615.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667536.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663670.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659835.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664868.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660304.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665642.1	Assembled from SLRseq reads (SRP049776)
ENST00000650319.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000667498.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654225.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000586625.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662817.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662817.1	Assembled from SLRseq reads (SRP049776)
ENST00000666775.1	Assembled from SLRseq reads (SRP049776)
ENST00000667349.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658257.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445604.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654882.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669453.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670636.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000609749.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664229.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653936.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000585533.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665356.1	Assembled from SLRseq reads (SRP049776)
ENST00000655734.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671425.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000476224.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661415.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647845.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000650308.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000376334.3	LOC642236
ENST00000377457.5	Non-canonical acceptor splice site at exon 5
ENST00000377457.5	non canonical polymorphism
ENST00000377457.5	rs76283403
ENST00000377449.1	non canonical polymorphism
ENST00000377449.1	non-canonical acceptor splice site at exon 6
ENST00000377449.1	rs76283403
ENST00000468763.2	Translation from corresponding TrEmbl entry Q8N7U8 looks unlikely
ENST00000468763.2	non canonical polymorphism
ENST00000468763.2	rs76283403 AC>AG
ENST00000495626.2	1bp missing at acceptor splice site at exon 5
ENST00000495626.2	non canonical polymorphism
ENST00000461037.2	AC>AG rs76283403
ENST00000461037.2	non canonical polymorphism
ENST00000485382.2	AC>AG rs76283403
ENST00000485382.2	non canonical polymorphism
ENST00000377445.5	non canonical polymorphism
ENST00000377445.5	non-canonical acceptor splice site at exon 5
ENST00000377445.5	rs76283403
ENST00000476973.2	non canonical polymorphism
ENST00000476973.2	rs76283403 AC>AG
ENST00000650561.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000457995.3	IGKV1/OR-2*01
ENST00000457995.3	P
ENST00000377420.1	MANE_select
ENST00000446944.3	P
ENST00000425587.1	putative novel transcript
ENST00000360171.11	MANE_select
ENST00000342833.4	MANE_select
ENST00000429953.6	QC splicing correct
ENST00000414223.4	QC splicing correct
ENST00000419576.1	QC splicing correct
ENST00000419576.1	putative novel transcript
ENST00000620833.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669967.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669967.1	Assembled from SLRseq reads (SRP049776)
ENST00000671415.1	Assembled from SLRseq reads (SRP049776)
ENST00000619971.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000619971.2	Assembled from SLRseq reads (SRP049776)
ENST00000671340.1	Assembled from SLRseq reads (SRP049776)
ENST00000653478.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653478.1	Assembled from SLRseq reads (SRP049776)
ENST00000655709.1	Assembled from SLRseq reads (SRP049776)
ENST00000604870.6	not best-in-genome evidence
ENST00000396396.6	MANE_select
ENST00000431583.1	QC splicing correct
ENST00000496758.1	DKFZp434C1915
ENST00000671372.1	Assembled from SLRseq reads (SRP049776)
ENST00000668093.1	Assembled from SLRseq reads (SRP049776)
ENST00000657969.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653382.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420855.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653727.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000590767.5	QC splicing correct
ENST00000377311.4	MANE_select
ENST00000413269.3	novel transcript
ENST00000432148.5	novel transcript
ENST00000446290.1	novel transcript
ENST00000265382.8	MANE_select
ENST00000265382.8	phosphatidylinositol-4-phosphate 5-kinase, type I, beta (MSS4, STM7)
ENST00000472907.6	phosphatidylinositol-4-phosphate 5-kinase, type I, beta (MSS4, STM7)
ENST00000474356.1	phosphatidylinositol-4-phosphate 5-kinase, type I, beta (MSS4, STM7)
ENST00000377284.5	alternative 5' UTR
ENST00000377284.5	alternatively spliced 5' UTR, shares CDS with bA203L2.1.1 (partial)
ENST00000377284.5	phosphatidylinositol-4-phosphate 5-kinase, type I, beta (MSS4, STM7)
ENST00000437200.5	alternative 5' UTR
ENST00000437200.5	alternatively spliced 5' UTR, shares CDS with bA203L2.1.1 (partial)
ENST00000437200.5	phosphatidylinositol-4-phosphate 5-kinase, type I, beta (MSS4, STM7)
ENST00000440050.5	alternative 5' UTR
ENST00000440050.5	alternatively spliced 5' UTR, shares CDS with bA203L2.1.1 (partial)
ENST00000440050.5	phosphatidylinositol-4-phosphate 5-kinase, type I, beta (MSS4, STM7)
ENST00000478500.3	non canonical TEC
ENST00000478500.3	phosphatidylinositol-4-phosphate 5-kinase, type I, beta (MSS4, STM7)
ENST00000394264.7	MANE_select
ENST00000394264.7	NP_612206.5
ENST00000394264.7	upstream ATG
ENST00000442103.1	putative novel transcript
ENST00000377276.5	MANE_select
ENST00000484259.3	LR annotation
ENST00000484259.3	MANE_select
ENST00000396366.6	NP_852090.1
ENST00000377270.8	alternative 5' UTR
ENST00000643713.1	alternative 5' UTR
ENST00000606364.5	alternative 5' UTR
ENST00000647986.1	alternative 5' UTR
ENST00000636438.1	CAGE supported TSS
ENST00000377259.5	tight junction protein 2 (zona occludens 2) (X104, ZO-2)
ENST00000377245.9	CAGE supported TSS
ENST00000377245.9	LR annotation
ENST00000377245.9	MANE_select
ENST00000257515.12	Friedreich ataxia region gene X123
ENST00000643727.1	Friedreich ataxia region gene X123
ENST00000645516.1	Friedreich ataxia region gene X123
ENST00000469179.2	novel transcript
ENST00000265381.7	MANE_select
ENST00000265381.7	myloid beta (A4) precursor protein-binding, family A, member 1 (X11)
ENST00000470082.2	myloid beta (A4) precursor protein-binding, family A, member 1 (X11)
ENST00000457328.1	QC splicing correct
ENST00000457328.1	putative novel transcript
ENST00000429567.2	putative novel transcript
ENST00000340434.5	MANE_select
ENST00000472967.2	novel transcript
ENST00000662063.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655860.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660402.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652595.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000377197.8	MANE_select
ENST00000377197.8	novel protein, possible ortholog of mouse RIKEN cDNA 1700028P14 gene
ENST00000466872.2	novel transcript
ENST00000495399.1	novel transcript
ENST00000480564.1	novel protein, possible ortholog of mouse RIKEN cDNA 1700028P14 gene
ENST00000414515.7	putative novel transcript
ENST00000610059.1	nested 454 RNA-Seq supported
ENST00000451488.1	putative novel transcript
ENST00000377182.5	MANE_select
ENST00000377182.5	continued from bA195E11.1.1 in Em:AL392044
ENST00000377182.5	novel protein (MGC21981)
ENST00000460688.1	novel transcript
ENST00000664022.1	Assembled from SLRseq reads (SRP049776)
ENST00000656832.1	Assembled from RACEseq reads
ENST00000670800.1	Assembled from SLRseq reads (SRP049776)
ENST00000361138.7	MANE_select
ENST00000361138.7	SMC5 structural maintenance of chromosomes 5-like 1 (yeast) (SMC5, KIAA0594)
ENST00000475540.1	SMC5 structural maintenance of chromosomes 5-like 1 (yeast) (SMC5, KIAA0594)
ENST00000471372.1	SMC5 structural maintenance of chromosomes 5-like 1 (yeast) (SMC5, KIAA0594)
ENST00000377126.3	basic transcription element binding protein 1 (BTEB, KLF9)
ENST00000677713.2	MANE_select
ENST00000396283.5	transient receptor potential cation channel subfamily M member 3
ENST00000361823.9	transient receptor potential cation channel subfamily M member 3
ENST00000354500.6	transient receptor potential cation channel subfamily M member 3 (DKFZp761A19121)
ENST00000377097.3	transient receptor potential cation channel subfamily M member 3
ENST00000437699.3	transient receptor potential cation channel subfamily M member 3
ENST00000436491.1	putative novel transcript
ENST00000415119.1	putative novel transcript
ENST00000377044.9	MANE_select
ENST00000377044.9	transmembrane protein 2
ENST00000377057.5	transmembrane protein 2
ENST00000377066.9	NP_001129292.1
ENST00000396272.7	transmembrane protein 2
ENST00000474495.1	transmembrane protein 2
ENST00000377055.1	transmembrane protein 2
ENST00000377043.2	transmembrane protein 2
ENST00000545719.1	alternative 5' UTR
ENST00000377041.6	novel protein (CGI-67)
ENST00000333421.7	MANE_select
ENST00000333421.7	novel protein (CGI-67)
ENST00000334731.7	MANE_select
ENST00000486911.2	novel protein
ENST00000652156.1	upstream ATG
ENST00000651200.2	CAGE supported TSS
ENST00000651200.2	MANE_select
ENST00000651200.2	upstream ATG
ENST00000652752.1	upstream ATG
ENST00000655511.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000358399.8	MANE_select
ENST00000358399.8	guanine deaminase, (KIAA1258)
ENST00000358399.8	guanine deaminase, (KIAA1258) (contains FLJ13667)
ENST00000376986.5	guanine deaminase
ENST00000475764.5	guanine deaminase
ENST00000477618.1	guanine deaminase (FLJ40221)
ENST00000414671.1	guanine deaminase
ENST00000489618.5	guanine deaminase
ENST00000436438.1	guanine deaminase
ENST00000427901.1	putative novel transcript
ENST00000659727.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653572.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665957.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451596.2	QC splicing correct
ENST00000451596.2	novel transcript
ENST00000436054.1	novel transcript (FLJ37891)
ENST00000657951.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000376962.10	MANE_select
ENST00000376962.10	alternative 5' UTR
ENST00000376962.10	alternatively spliced in 5' UTR, shares CDS with bA63P12.1.1
ENST00000376962.10	zinc finger protein 216 (FLJ22129)
ENST00000376960.8	zinc finger protein 216
ENST00000343431.6	alternative 5' UTR
ENST00000343431.6	alternatively spliced in 5' UTR, shares CDS with bA63P12.1.1
ENST00000343431.6	zinc finger protein 216
ENST00000471197.1	zinc finger protein 216
ENST00000376956.3	zinc finger protein 216
ENST00000487330.1	zinc finger protein 216
ENST00000415024.1	ribosomal protein S12 (RPS12) pseudogene
ENST00000297784.10	MANE_select
ENST00000297784.10	transmembrane, cochlear expressed, 1
ENST00000497073.1	transmembrane, cochlear expressed, 1
ENST00000645208.2	CAGE supported TSS
ENST00000645208.2	LR annotation
ENST00000645208.2	alternative 5' UTR
ENST00000492418.1	transmembrane, cochlear expressed, 1
ENST00000486417.5	transmembrane, cochlear expressed, 1
ENST00000469455.1	transmembrane, cochlear expressed, 1
ENST00000457473.1	ribosomal protein S20 (RPS20) pseudogene
ENST00000447672.1	ribosomal protein S27a (RPS27A) pseudogene
ENST00000658474.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658474.1	novel transcript
ENST00000423171.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449235.5	novel transcript
ENST00000654093.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654093.1	QC splicing correct
ENST00000654093.1	novel transcript
ENST00000656141.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000453787.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653947.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000297785.8	MANE_select
ENST00000297785.8	aldehyde dehydrogenase 1 family, member A1 (FLJ22998, FLJ20111)
ENST00000376939.5	aldehyde dehydrogenase 1 family, member A1
ENST00000482210.5	aldehyde dehydrogenase 1 family, member A1
ENST00000419959.5	aldehyde dehydrogenase 1 family, member A1
ENST00000419959.5	alternative 5' UTR
ENST00000419959.5	alternatively spliced in 5' UTR, shares partial CDS with bA151D14.2.1
ENST00000446946.1	aldehyde dehydrogenase 1 family, member A1
ENST00000446946.1	alternative 5' UTR
ENST00000446946.1	alternatively spliced in 5' UTR, shares partial CDS with bA151D14.2.1
ENST00000493113.1	aldehyde dehydrogenase 1 family, member A1
ENST00000493311.1	QC splicing correct
ENST00000493311.1	aldehyde dehydrogenase 1 family, member A1
ENST00000416662.1	cytochrome P450, family 1, subfamily A, polypeptide 1 (CYP1A1) pseudogene
ENST00000468639.5	annexin I (ANX1, LPC1)
ENST00000456643.5	annexin I (ANX1, LPC1)
ENST00000257497.11	MANE_select
ENST00000257497.11	annexin I (ANX1, LPC1)
ENST00000415424.5	alternative 5' UTR
ENST00000415424.5	alternatively spliced in 5' UTR, shares partial CDS with bA71A24.1.1
ENST00000415424.5	annexin I (ANX1, LPC1)
ENST00000376911.1	annexin I (ANX1, LPC1) (FLJ23900)
ENST00000495713.5	annexin I (ANX1, LPC1)
ENST00000489109.1	annexin I (ANX1, LPC1)
ENST00000491192.1	annexin I (ANX1, LPC1)
ENST00000657478.1	Assembled from SLRseq reads (SRP049776)
ENST00000667966.1	Assembled from SLRseq reads (SRP049776)
ENST00000422909.1	putative novel transcript
ENST00000450410.2	uncharacterized hypothalamus protein HT007 pseudogene
ENST00000669866.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657050.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423681.1	putative novel transcript
ENST00000662049.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417576.2	putative novel transcript
ENST00000376896.8	MANE_select
ENST00000658390.1	Assembled from RACEseq reads
ENST00000360774.6	MANE_select
ENST00000360774.6	transient receptor potential cation channel, subfamily  M, member 6 (CHAK2, FLJ20087, FLJ22628)
ENST00000483186.1	transient receptor potential cation channel, subfamily  M, member 6 (CHAK2, FLJ20087, FLJ22628)
ENST00000359047.2	transient receptor potential cation channel, subfamily  M, member 6 (CHAK2, FLJ20087, FLJ22628)
ENST00000414735.2	novel pseudogene
ENST00000376854.6	MANE_select
ENST00000376854.6	novel protein (FLJ10110)
ENST00000376834.8	MANE_select
ENST00000376834.8	novel protein (FLJ25795)
ENST00000451153.1	novel protein (FLJ25795)
ENST00000376830.3	novel protein (FLJ25795)
ENST00000455336.2	putative novel transcript
ENST00000376811.5	novel protein (FLJ20559)
ENST00000361092.9	MANE_select
ENST00000361092.9	novel protein (FLJ20559)
ENST00000482537.1	novel transcript
ENST00000376808.8	novel protein (FLJ20559)
ENST00000494066.1	novel protein (FLJ20559)
ENST00000466137.1	novel transcript
ENST00000490321.1	novel protein (FLJ20559)
ENST00000346234.7	MANE_select
ENST00000346234.7	osteoclast stimulating factor 1 (OSF, SH3P2)
ENST00000426848.2	cell division cycle associated 7 (JPO1, FLJ14722) (CDCA7) pseudogene
ENST00000455583.1	putative novel transcript
ENST00000376767.7	proprotein convertase subtilisin/kexin type 5 (PC5, PC6, SPC6) (FLJ31640)
ENST00000674117.1	CAGE supported TSS
ENST00000674117.1	MANE_select
ENST00000376752.8	proprotein convertase subtilisin/kexin type 5 (PC5, PC6, SPC6)
ENST00000376752.8	proprotein convertase subtilisin/kexin type 5 (PC5, PC6, SPC6) (contains FLJ13034)
ENST00000424854.6	proprotein convertase subtilisin/kexin type 5 (PC5, PC6, SPC6)
ENST00000455778.1	proprotein convertase subtilisin/kexin type 5
ENST00000376736.6	MANE_select
ENST00000376736.6	novel protein (FLJ11149)
ENST00000483155.5	novel transcript
ENST00000488136.5	glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase) (C2GNT, NAGCT2)
ENST00000376730.5	MANE_select
ENST00000376730.5	glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase) (C2GNT, NAGCT2)
ENST00000480311.5	glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase) (C2GNT, NAGCT2)
ENST00000648797.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000376718.8	MANE_select
ENST00000426088.5	DKFZp726K117
ENST00000376713.3	novel protein
ENST00000492157.5	novel protein (LOC158471)
ENST00000489555.1	novel transcript
ENST00000412654.1	prostate cancer antigen 3 (DD3)
ENST00000665558.1	Assembled from SLRseq reads (SRP049776)
ENST00000667357.1	Assembled from RACEseq reads
ENST00000376708.1	MANE_select
ENST00000376708.1	NP_001013757
ENST00000376708.1	novel protein similar to forkhead box B1 (FOXB1)
ENST00000376708.1	possible pseudogene
ENST00000644612.1	CAGE supported TSS
ENST00000644612.1	LR annotation
ENST00000360280.8	CAGE supported TSS
ENST00000360280.8	LR annotation
ENST00000360280.8	MANE_select
ENST00000360280.8	chorea acanthocytosis
ENST00000360280.8	chorea acanthocytosis (FLJ12905, FLJ23370)
ENST00000645632.1	CAGE supported TSS
ENST00000645632.1	LR annotation
ENST00000643348.1	CAGE supported TSS
ENST00000643348.1	LR annotation
ENST00000471439.1	chorea acanthocytosis
ENST00000493341.1	chorea acanthocytosis (FLJ20266)
ENST00000419472.1	chorea acanthocytosis
ENST00000484581.6	chorea acanthocytosis
ENST00000376646.3	alternative 5' UTR
ENST00000376646.3	not organism-supported
ENST00000467124.1	chorea acanthocytosis
ENST00000341700.7	MANE_select
ENST00000341700.7	guanine nucleotide binding protein (G protein), alpha 14
ENST00000464095.1	guanine nucleotide binding protein (G protein), alpha 14
ENST00000439145.1	novel transcript
ENST00000286548.9	MANE_select
ENST00000286548.9	guanine nucleotide binding protein (G protein), q polypeptide
ENST00000411677.1	guanine nucleotide binding protein (G protein), q polypeptide
ENST00000433468.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000424347.6	FLJ12643
ENST00000643273.2	MANE_select
ENST00000647199.1	NAGNAG splice site
ENST00000645865.1	NAGNAG splice site
ENST00000415759.6	NAGNAG splice site
ENST00000415759.6	NP_115547.1
ENST00000376597.9	NAGNAG splice site
ENST00000642669.1	NAGNAG splice site
ENST00000644208.1	NAGNAG splice site
ENST00000487108.6	novel transcript
ENST00000376588.4	MANE_select
ENST00000376588.4	phosphoserine aminotransferase (PSA)
ENST00000347159.6	phosphoserine aminotransferase (PSA)
ENST00000344739.5	keratin pseudogene
ENST00000659743.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663382.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667198.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667369.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650036.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000424980.5	putative novel transcript
ENST00000413352.3	putative novel transcript
ENST00000670754.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663687.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671232.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656806.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665514.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666862.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000461758.6	QC splicing correct
ENST00000376552.8	MANE_select
ENST00000376552.8	transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) (ESG4)
ENST00000435650.5	transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) (ESG4)
ENST00000414465.5	transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) (ESG4)
ENST00000376525.5	transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) (ESG4)
ENST00000425506.5	transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) (ESG4)
ENST00000485159.5	transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) (ESG4)
ENST00000428713.5	transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) (ESG4)
ENST00000455913.5	transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) (ESG4)
ENST00000493163.1	transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) (ESG4)
ENST00000478290.2	transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) (ESG4)
ENST00000448475.1	putative novel transcript
ENST00000623889.1	confirm experimentally
ENST00000417801.1	putative novel transcript
ENST00000443325.1	novel pseudogene
ENST00000441327.1	ribosomal protein S19 (RPS19) pseudogene
ENST00000397864.2	putatitive novel transcript
ENST00000412447.1	ribosomal protein S20 (RPS20) pseudogene
ENST00000457409.1	novel pseudogene
ENST00000376499.8	MANE_select
ENST00000376499.8	transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) (ESG, GRG1)
ENST00000376484.2	transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) (ESG, GRG1)
ENST00000491534.5	transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) (ESG, GRG1)
ENST00000464999.1	transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) (ESG, GRG1)
ENST00000418319.5	transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) (ESG, GRG1)
ENST00000376463.3	transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) (ESG, GRG1)
ENST00000437181.1	novel transcript
ENST00000413050.1	novel transcript
ENST00000527857.5	novel transcript
ENST00000457558.7	novel transcript
ENST00000344803.3	FLJ46321
ENST00000344803.3	MANE_select
ENST00000445918.1	ribosomal protein S2 (LLREP3) (RPS2) pseudogene
ENST00000436084.1	putative novel transcript
ENST00000438986.3	novel pseudogene
ENST00000422010.2	putative novel transcript
ENST00000623079.1	confirm experimentally
ENST00000661177.1	Assembled from SLRseq reads (SRP049776)
ENST00000432491.1	ribosomal protein S6 (RPS6) pseudogene
ENST00000376447.4	MANE_select
ENST00000652950.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662757.1	Assembled from SLRseq reads (SRP049776)
ENST00000416473.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000416473.2	putative novel transcript
ENST00000665291.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668931.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000328788.5	novel protein (MGC20553)
ENST00000376434.5	novel protein (MGC20553)
ENST00000376438.5	novel protein (MGC20553)
ENST00000304195.8	MANE_select
ENST00000465485.1	novel transcript
ENST00000431299.1	novel protein (MGC20553)
ENST00000649946.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000458111.1	putative novel transcript
ENST00000533522.1	novel protein
ENST00000376419.5	MANE_select
ENST00000376395.9	MANE_select
ENST00000376365.7	protein kinase anchoring protein GKAP42 (FKSG21)
ENST00000376371.7	MANE_select
ENST00000376371.7	protein kinase anchoring protein GKAP42 (FKSG21)
ENST00000376362.1	protein kinase anchoring protein GKAP42 (FKSG21)
ENST00000388782.8	protein kinase anchoring protein GKAP42 (FKSG21)
ENST00000491634.1	novel transcript
ENST00000485742.5	alternative 5' UTR
ENST00000462223.1	QC splicing correct
ENST00000650551.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000667208.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000458016.5	novel transcript
ENST00000439378.7	QC splicing correct
ENST00000439378.7	novel transcript
ENST00000417672.1	novel transcript
ENST00000412069.1	novel transcript
ENST00000421734.5	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000586211.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653678.1	Assembled from SLRseq reads (SRP049776)
ENST00000589233.5	putative novel transcript
ENST00000297814.7	MANE_select
ENST00000376347.1	novel protein (DKFZp434D0917)
ENST00000495062.2	QC splicing correct
ENST00000495062.2	novel protein (DKFZp434D0917)
ENST00000376344.8	MANE_select
ENST00000376344.8	novel protein (MGC10999)
ENST00000314700.5	novel protein (MGC10999)
ENST00000376340.2	QC splicing correct
ENST00000376340.2	novel protein (MGC10999)
ENST00000376263.8	MANE_select
ENST00000376263.8	genebuild_only_MANE
ENST00000376281.8	heterogeneous nuclear ribonucleoprotein K (CSBP, TUNP, HNRNPK)
ENST00000351839.7	heterogeneous nuclear ribonucleoprotein K (CSBP, TUNP, HNRNPK)
ENST00000360384.9	heterogeneous nuclear ribonucleoprotein K (CSBP, TUNP, HNRNPK)
ENST00000493362.1	heterogeneous nuclear ribonucleoprotein K (CSBP, TUNP, HNRNPK)
ENST00000492865.1	heterogeneous nuclear ribonucleoprotein K (CSBP, TUNP, HNRNPK)
ENST00000481820.6	heterogeneous nuclear ribonucleoprotein K (CSBP, TUNP, HNRNPK)
ENST00000457156.5	heterogeneous nuclear ribonucleoprotein K (CSBP, TUNP, HNRNPK)
ENST00000472778.5	heterogeneous nuclear ribonucleoprotein K (CSBP, TUNP, HNRNPK)
ENST00000376256.2	heterogeneous nuclear ribonucleoprotein K (CSBP, TUNP, HNRNPK)
ENST00000448389.1	putative novel transcript
ENST00000325875.7	novel protein (FLJ12888)
ENST00000445877.6	CAGE supported TSS
ENST00000445877.6	MANE_select
ENST00000445877.6	alternative 5' UTR
ENST00000658503.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000376238.5	MANE_select
ENST00000376238.5	solute carrier family 28 (sodium-coupled nucleoside transporter), member 3, (CNT3)
ENST00000495823.1	solute carrier family 28 (sodium-coupled nucleoside transporter), member 3, (CNT3)
ENST00000419815.1	putative novel transcript
ENST00000650453.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000423044.2	novel pseudogene
ENST00000359847.4	Neurotrophic tyrosine kinase, receptor, type 2 (TRKB)
ENST00000376208.6	Neurotrophic tyrosine kinase, receptor, type 2 (TRKB)
ENST00000277120.8	CAGE supported TSS
ENST00000277120.8	MANE_select
ENST00000277120.8	Neurotrophic tyrosine kinase, receptor, type 2 (TRKB)
ENST00000323115.10	Neurotrophic tyrosine kinase, receptor, type 2 (TRKB)
ENST00000304053.10	Neurotrophic tyrosine kinase, receptor, type 2 (TRKB)
ENST00000649497.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000660241.1	Assembled from RACEseq reads
ENST00000669133.1	Assembled from SLRseq reads (SRP049776)
ENST00000662737.1	Assembled from SLRseq reads (SRP049776)
ENST00000661197.1	Assembled from SLRseq reads (SRP049776)
ENST00000423835.1	pseudogene similar to part of serine/threonine kinase 33 (STK33)
ENST00000376083.7	ATP/GTP binding protein 1 (NNA1, KIAA1035)
ENST00000357081.8	MANE_select
ENST00000489265.1	ATP/GTP binding protein 1 (NNA1, KIAA1035)
ENST00000376081.8	NMD likely if extended
ENST00000491784.3	ATP/GTP binding protein 1 (NNA1, KIAA1035)
ENST00000376080.2	NMD likely if extended
ENST00000422653.1	pseudogene similar to part of a novel protein (DKFZp434D0917)
ENST00000447148.1	putative novel transcript
ENST00000657430.1	Assembled from SLRseq reads (SRP049776)
ENST00000665432.1	Assembled from SLRseq reads (SRP049776)
ENST00000418478.5	putative novel transcript
ENST00000653610.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670006.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000655578.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669324.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662541.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662541.1	putative novel transcript
ENST00000665605.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439544.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439544.6	putative novel transcript
ENST00000456242.1	putative novel transcript
ENST00000443630.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662699.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653820.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662218.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659440.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665115.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663552.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666824.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666824.1	Assembled from SLRseq reads (SRP049776)
ENST00000658640.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667142.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656046.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657835.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661241.1	Assembled from SLRseq reads (SRP049776)
ENST00000657057.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662476.1	Assembled from SLRseq reads (SRP049776)
ENST00000665236.1	Assembled from SLRseq reads (SRP049776)
ENST00000655407.1	Assembled from SLRseq reads (SRP049776)
ENST00000442109.2	novel pseudogene (DFKZP564M182)
ENST00000361671.10	MANE_select
ENST00000361671.10	novel protein (FLJ21613) similar to rat corneal wound healing related protein (includes FLJ22634)
ENST00000416045.4	novel protein (FLJ21613) similar to rat corneal wound healing related protein (includes FLJ22634)
ENST00000376040.2	novel protein (FLJ21613) similar to rat corneal wound healing related protein (includes FLJ22634)
ENST00000388712.7	MANE_select
ENST00000388712.7	golgi phosphoprotein 2 (GP73)
ENST00000388711.7	alternative 5' UTR
ENST00000388711.7	alternatively spliced 5' UTR, shares CDs with bA379P1.2.1
ENST00000388711.7	golgi phosphoprotein 2 (GP73)
ENST00000486130.5	alternative 5' UTR
ENST00000466178.1	alternative 5' UTR
ENST00000662252.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000339137.7	NP_001263295.1
ENST00000375991.9	MANE_select
ENST00000375991.9	novel protein (MGC4276)
ENST00000311534.6	novel protein (MGC4276)
ENST00000326094.4	novel protein (MGC4276)
ENST00000277141.10	novel protein (FLJ13409)
ENST00000375963.8	MANE_select
ENST00000375963.8	novel protein (FLJ13409)
ENST00000375960.6	novel protein (FLJ13409)
ENST00000375957.5	novel protein (FLJ13409)
ENST00000469004.1	novel transcript
ENST00000375948.2	novel protein (FLJ13409)
ENST00000375947.1	novel protein (FLJ13409)
ENST00000422735.1	ribosomal protein S6 (RPS6) pseudogene
ENST00000660690.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657061.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665072.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000438582.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000438582.2	putative novel transcript
ENST00000443163.1	putative novel transcript
ENST00000649193.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000298743.9	MANE_select
ENST00000298743.9	growth arrest-specific 1
ENST00000654660.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670732.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669870.1	Assembled from SLRseq reads (SRP049776)
ENST00000647820.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000669921.1	Assembled from SLRseq reads (SRP049776)
ENST00000472284.5	alternative 5' UTR
ENST00000495182.5	QC splicing correct
ENST00000408954.8	MANE_select
ENST00000408954.8	alternative 5' UTR
ENST00000496522.5	continues as bA249H20.1.2 in Em:AL591852
ENST00000496522.5	death-assodeath-associated protein kinase 1
ENST00000497743.1	death-associated protein kinase 1
ENST00000468482.1	death-associated protein kinase 1
ENST00000401543.2	ribosomal protein S29 (RPS29) pseudogene
ENST00000431813.1	putative novel transcript
ENST00000678442.1	alternative 5' UTR
ENST00000679149.1	alternative 5' UTR
ENST00000679149.1	cathepsin L
ENST00000679157.1	alternative 5' UTR
ENST00000679157.1	alternatively spliced 5' UTR, shares CDS with bA65B23.2.1
ENST00000679157.1	cathepsin L
ENST00000676946.1	alternative 5' UTR
ENST00000676531.1	alternative 5' UTR
ENST00000677935.1	cathepsin L
ENST00000677821.1	alternative 5' UTR
ENST00000677019.1	cathepsin L
ENST00000678649.1	alternative 5' UTR
ENST00000677262.1	alternative 5' UTR
ENST00000343150.10	MANE_select
ENST00000343150.10	SW:P07711.2
ENST00000343150.10	cathepsin L
ENST00000678367.1	alternative 5' UTR
ENST00000677864.1	alternative 5' UTR
ENST00000340342.11	alternative 5' UTR
ENST00000676881.1	alternative 5' UTR
ENST00000676769.1	alternative 5' UTR
ENST00000677638.1	alternative 3' UTR
ENST00000677761.1	alternative 5' UTR
ENST00000676480.1	alternative 5' UTR
ENST00000679028.1	alternative 5' UTR
ENST00000412179.5	cathepsin pseudogene
ENST00000424473.2	pseudogene similar to part a fructose-1,6-bisphosphatase protein
ENST00000413075.2	cathepsin L (MEP, CATL) (CTSL) pseudogene
ENST00000411992.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000411992.2	putative novel transcript
ENST00000447524.1	putative novel transcript
ENST00000325643.6	MANE_select
ENST00000325643.6	novel protein (FLJ35866)
ENST00000427728.1	pseudogene similar to part of a novel protein
ENST00000325303.9	MANE_select
ENST00000459720.5	cell cycle related kinase (CCRK,CDCH)
ENST00000375883.7	cell cycle related kinase (CCRK,CDCH)
ENST00000661542.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000623259.1	confirm experimentally
ENST00000660864.1	Assembled from SLRseq reads (SRP049776)
ENST00000666913.1	Assembled from SLRseq reads (SRP049776)
ENST00000485804.5	spindlin
ENST00000469017.6	spindlin
ENST00000462844.5	spindlin
ENST00000375859.4	MANE_select
ENST00000375859.4	spindlin
ENST00000485565.6	QC splicing correct
ENST00000485565.6	spindlin
ENST00000483785.1	spindlin
ENST00000649870.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000656971.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656971.1	QC splicing correct
ENST00000656971.1	novel transcript
ENST00000657084.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663346.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000418343.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664638.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668916.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660651.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661837.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663432.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000544644.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657830.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669106.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657641.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000421482.1	putative novel transcript
ENST00000375850.3	novel protein (FLJ37523)
ENST00000358157.3	MANE_select
ENST00000375846.3	endothelial differentiation, sphingolipid G-protein-coupled receptor, 3
ENST00000375835.9	MANE_select
ENST00000375831.1	novel protein (SHC3)
ENST00000456944.1	putative novel trasncript
ENST00000429700.1	putative novel transcript
ENST00000314355.7	CDC28 protein kinase regulatory subunit 2 (CKSHS2)
ENST00000314355.7	MANE_select
ENST00000375807.8	MANE_select
ENST00000375807.8	SECIS binding protein 2 (SBP2)
ENST00000425851.1	SECIS binding protein 2 (SBP2)
ENST00000440898.1	SECIS binding protein 2 (SBP2)
ENST00000339861.8	alternative 5' UTR
ENST00000339861.8	confirm experimentally
ENST00000450295.5	alternative 5' UTR
ENST00000422704.7	MANE_select
ENST00000422704.7	alternative 5' UTR
ENST00000420681.6	alternative 5' UTR
ENST00000433650.5	alternative 5' UTR
ENST00000540475.5	alternative 5' UTR
ENST00000418828.1	alternative 5' UTR
ENST00000420670.5	alternative 5' UTR
ENST00000464051.1	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
ENST00000252506.11	MANE_select
ENST00000252506.11	growth arrest and DNA-damage-inducible, gamma (CR6, DDIT2, GRP17)
ENST00000375769.1	growth arrest and DNA-damage-inducible, gamma (CR6, DDIT2, GRP17)
ENST00000494726.1	growth arrest and DNA-damage-inducible, gamma (CR6, DDIT2, GRP17)
ENST00000650746.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000661900.1	Assembled from SLRseq reads (SRP049776)
ENST00000421297.1	non canonical polymorphism
ENST00000656288.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659397.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666051.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666051.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000655497.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658655.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654395.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653040.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666443.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660571.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659157.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657411.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659233.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660980.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667587.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662981.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671506.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652979.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670775.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657253.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446201.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446201.2	putative novel transcript
ENST00000665098.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426593.1	novel transcript
ENST00000625060.1	confirm experimentally
ENST00000659218.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436671.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436671.2	novel transcript
ENST00000425666.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000425666.2	novel transcript
ENST00000665506.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666877.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664603.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665289.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658201.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668348.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449990.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449990.2	novel transcript
ENST00000656691.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427523.1	novel transcript
ENST00000655942.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668156.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668156.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000665733.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667748.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000429044.1	novel transcript
ENST00000666177.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000375765.5	MANE_select
ENST00000636786.1	alternative 5' UTR
ENST00000637905.1	alternative 5' UTR
ENST00000375751.8	alternative 5' UTR
ENST00000375751.8	alternatively spliced in 5' UTR, shares CDS with bA83L6.1.3
ENST00000375751.8	spleen tyrosine kinase
ENST00000375754.9	MANE_select
ENST00000375754.9	spleen tyrosine kinase
ENST00000375747.5	spleen tyrosine kinase
ENST00000476708.1	alternative 5' end
ENST00000476708.1	spleen tyrosine kinase
ENST00000375746.1	alternative 5' UTR
ENST00000375746.1	alternatively spliced in 5' UTR, shares CDS with bA83L6.1.1
ENST00000375746.1	spleen tyrosine kinase
ENST00000667914.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427745.1	putative novel transcript
ENST00000661568.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655868.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653201.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662091.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655562.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663149.1	Assembled from SLRseq reads (SRP049776)
ENST00000666264.1	Assembled from SLRseq reads (SRP049776)
ENST00000457976.1	novel transcript
ENST00000665623.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423380.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423380.2	novel transcript
ENST00000667274.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658132.1	Assembled from SLRseq reads (SRP049776)
ENST00000668856.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439438.1	novel transcript
ENST00000668360.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000437389.5	novel transcript
ENST00000414768.2	novel transcript
ENST00000421595.1	novel transcript
ENST00000423719.3	novel transcript (LOC286371) (FLJ37813)
ENST00000659376.1	Assembled from SLRseq reads (SRP049776)
ENST00000608240.1	454 RNA-Seq supported
ENST00000303617.5	AU RNA binding protein/enoyl-Coenzyme A hydratase
ENST00000303617.5	AU RNA binding protein/enoyl-Coenzyme A hydratase (AUH)
ENST00000375731.9	AU RNA binding protein/enoyl-Coenzyme A hydratase
ENST00000375731.9	MANE_select
ENST00000473695.1	AU RNA binding protein/enoyl-Coenzyme A hydratase (AUH)
ENST00000478465.5	AU RNA binding protein/enoyl-Coenzyme A hydratase
ENST00000475023.1	AU RNA binding protein/enoyl-Coenzyme A hydratase
ENST00000297689.4	MANE_select
ENST00000297689.4	nuclear factor, interleukin 3 regulated
ENST00000442072.1	putative novel transcript
ENST00000375708.4	MANE_select
ENST00000643599.1	alternative 3' UTR
ENST00000642671.1	alternative 3' UTR
ENST00000646481.1	alternative 3' UTR
ENST00000262554.7	MANE_select
ENST00000262554.7	serine palmitoyltransferase, long chain base subunit 1
ENST00000469778.1	serine palmitoyltransferase, long chain base subunit 1
ENST00000482632.5	serine palmitoyltransferase, long chain base subunit 1
ENST00000337841.4	serine palmitoyltransferase, long chain base subunit 1
ENST00000477888.1	serine palmitoyltransferase, long chain base subunit 1
ENST00000488921.5	serine palmitoyltransferase, long chain base subunit 1
ENST00000461132.1	serine palmitoyltransferase, long chain base subunit 1
ENST00000422570.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000412768.1	protein tyrosine phosphatase (similar to rodent ESP) pseudogene
ENST00000367276.8	novel transcript
ENST00000417983.5	novel transcript
ENST00000416438.6	novel transcript (FLJ13600) (LOC158314)
ENST00000438322.1	novel transcript
ENST00000430945.5	novel transcript
ENST00000421234.5	novel transcript
ENST00000444476.1	novel transcript
ENST00000434944.1	novel transcript
ENST00000415471.2	putative novel transcript
ENST00000457003.1	novel transcript
ENST00000443024.7	MANE_select
ENST00000443024.7	alternative 5' UTR
ENST00000443024.7	isoleucine-tRNA synthetase (ILRS)
ENST00000375643.7	isoleucine-tRNA synthetase (ILRS)
ENST00000375627.1	isoleucine-tRNA synthetase (ILRS)
ENST00000474340.1	isoleucine-tRNA synthetase (ILRS)
ENST00000473915.1	isoleucine-tRNA synthetase (ILRS)
ENST00000467876.1	isoleucine-tRNA synthetase (ILRS)
ENST00000472894.1	isoleucine-tRNA synthetase (ILRS)
ENST00000498025.1	isoleucine-tRNA synthetase (ILRS)
ENST00000490438.1	isoleucine-tRNA synthetase (ILRS)
ENST00000430417.1	isoleucine-tRNA synthetase (ILRS)
ENST00000442668.7	MANE_select
ENST00000442668.7	alternative 5' UTR
ENST00000442668.7	non canonical U12
ENST00000536593.5	alternative 5' UTR
ENST00000545558.5	alternative 5' UTR
ENST00000360868.7	(FLJ20736) (contains FLJ21133, FLJ14183, FLJ12693)
ENST00000360868.7	non canonical U12
ENST00000535387.5	confirm experimentally
ENST00000542053.5	confirm experimentally
ENST00000542053.5	non canonical U12
ENST00000432670.6	alternative 5' UTR
ENST00000432670.6	non canonical U12
ENST00000432670.6	novel protein (FLJ10187)
ENST00000434228.5	alternative 3' UTR
ENST00000434228.5	alternative 5' UTR
ENST00000434228.5	non canonical U12
ENST00000433029.6	alternative 5' UTR
ENST00000421075.6	alternative 5' UTR
ENST00000421075.6	non canonical U12
ENST00000411621.6	alternative 5' UTR
ENST00000535807.5	alternative 5' UTR
ENST00000536624.5	alternative 5' UTR
ENST00000542613.5	alternative 5' UTR
ENST00000542573.5	alternative 5' UTR
ENST00000543260.5	alternative 5' UTR
ENST00000543985.5	NAGNAG splice site
ENST00000544321.5	NAGNAG splice site
ENST00000544321.5	alternative 3' UTR
ENST00000544321.5	alternative 5' UTR
ENST00000375587.8	MANE_select
ENST00000375587.8	novel protein (FLJ35284)
ENST00000375587.8	novel protein (FLJ35284) (contains FLJ36981)
ENST00000375579.7	novel protein (FLJ33928)
ENST00000375576.1	novel protein (DKFZp667I039)
ENST00000456945.1	UPF0183 protein pseudogene
ENST00000375561.10	DKFZp586P2421
ENST00000375561.10	MANE_select
ENST00000262551.8	alternative 5' UTR
ENST00000375550.5	MANE_select
ENST00000375550.5	osteomodulin
ENST00000375544.7	CAGE supported TSS
ENST00000375544.7	LR annotation
ENST00000344604.9	extracellular matrix protein 2, female organ and adipocyte specific
ENST00000375540.5	extracellular matrix protein 2, female organ and adipocyte specific
ENST00000395534.2	alternative 5' UTR
ENST00000395534.2	alternatively spliced in 5' UTR, shares CDS with bA19J3.1.1
ENST00000395534.2	extracellular matrix protein 2, female organ and adipocyte specific
ENST00000650118.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000287996.8	MANE_select
ENST00000287996.8	chromosome 9 open reading frame 12 (INSP5K2, FLJ13163)
ENST00000486841.1	chromosome 9 open reading frame 12 novel transcript (FLJ39073)
ENST00000375522.1	chromosome 9 open reading frame 12
ENST00000442640.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000375512.3	coiled-coil protein (BICD2)
ENST00000356884.11	MANE_select
ENST00000356884.11	coiled-coil protein (BICD2) (KIAA0699)
ENST00000655112.1	Assembled from SLRseq reads (SRP049776)
ENST00000464387.5	FLJ36178
ENST00000375495.8	DKFZp667F196
ENST00000375495.8	MANE_select
ENST00000332591.6	FLJ33884
ENST00000375482.8	FGD1 family, member 3
ENST00000375482.8	MANE_select
ENST00000468206.6	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000494669.2	FGD1 family, member 3
ENST00000467786.1	FGD1 family, member 3
ENST00000467786.1	FGD1 family, member 3 (FLJ00004)
ENST00000494553.1	FGD1 family, member 3
ENST00000488407.1	FGD1 family, member 3
ENST00000375472.8	MANE_select
ENST00000375472.8	novel protein (MGC26847)
ENST00000465709.5	novel transcript
ENST00000428958.2	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000428958.2	QC splicing correct
ENST00000428958.2	putative novel transcript
ENST00000375464.7	MANE_select
ENST00000375464.7	novel protein (MGC11115)
ENST00000466409.1	novel protein (FLJ33154)
ENST00000495641.5	novel transcript
ENST00000466929.5	novel transcript
ENST00000468781.5	novel transcript
ENST00000490488.5	novel transcript
ENST00000498243.1	novel transcript
ENST00000475574.1	novel transcript
ENST00000488630.1	novel transcript
ENST00000375446.5	MANE_select
ENST00000375446.5	ninjurin 1
ENST00000489274.1	ninjurin 1
ENST00000470314.5	ninjurin 1
ENST00000461162.5	ninjurin 1
ENST00000490564.1	ninjurin 1
ENST00000366188.2	putative novel transcript
ENST00000411624.5	chimearic cDNA, 5' end found on chromosome 1
ENST00000462595.1	protein kinase, lysine deficient 2 (WNK2, NY-CO-43, SDCCAG43, P/OKcl.13)
ENST00000474009.5	protein kinase, lysine deficient 2 (WNK2, NY-CO-43, SDCCAG43, P/OKcl.13)
ENST00000460335.1	protein kinase, lysine deficient 2 (WNK2, NY-CO-43, SDCCAG43, P/OKcl.13)
ENST00000471076.1	protein kinase, lysine deficient 2 (WNK2, NY-CO-43, SDCCAG43, P/OKcl.13)
ENST00000648864.1	QC splicing correct
ENST00000648864.1	novel protein similar to chromosome 9 open reading frame 10 (C9orf10)
ENST00000443716.1	putative novel transcript
ENST00000445280.1	putative novel transcript
ENST00000375412.11	MANE_select
ENST00000375412.11	continues as bA165J3.4.3 in Em:AL583839
ENST00000375412.11	novel protein (FLJ31534)
ENST00000479094.5	continues as bA165J3.4.2 in Em:AL583839
ENST00000479094.5	novel transcript
ENST00000423591.5	novel protein
ENST00000523407.1	QC splicing correct
ENST00000520403.1	QC splicing correct
ENST00000483149.6	putative novel transcript
ENST00000483056.5	continues as bA165J3.4.5 in Em:AL583839
ENST00000483056.5	novel transcript
ENST00000476484.5	continues as bA165J3.4.4 in Em:AL583839
ENST00000476484.5	novel protein
ENST00000428152.1	continues as bA165J3.4.7 in Em:AL583839
ENST00000428152.1	novel protein
ENST00000428378.1	continues as bA165J3.4.6 in Em:AL583839
ENST00000428378.1	novel protein
ENST00000277165.11	CCDS6706.1
ENST00000277165.11	MANE_select
ENST00000277165.11	chromosome 9 open reading frame 10 (KIAA0183)
ENST00000375389.7	chromosome 9 open reading frame 10
ENST00000446420.2	chromosome 9 open reading frame 10
ENST00000475933.1	chromosome 9 open reading frame 10
ENST00000427765.1	chromosome 9 open reading frame 10
ENST00000359246.9	MANE_select
ENST00000359246.9	PHD finger protein 2 (GRC5, KIAA0662)
ENST00000443771.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669339.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669339.1	putative novel transcript
ENST00000668608.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000253968.11	MANE_select
ENST00000650567.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000620992.5	MANE_select
ENST00000620992.5	genebuild_only_MANE
ENST00000288976.3	protein tyrosine phosphatase PTP9Q22
ENST00000654577.1	Assembled from SLRseq reads (SRP049776)
ENST00000660581.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657255.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000395395.7	MANE_select
ENST00000340911.8	zinc finger protein 169
ENST00000481550.6	novel transcript
ENST00000253262.9	MANE_select
ENST00000253262.9	novel protein (DKFZp434I1117)
ENST00000454869.2	Assembled from SLRseq reads (SRP049776)
ENST00000375344.8	MANE_select
ENST00000375344.8	novel protein similar to mouse hippocampus abundant gene transcript 1 (HIAT1)
ENST00000660617.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448030.1	leishmanolysin-like (metallopeptidase M8 family)(LMLN) pseudogene
ENST00000375337.4	Fructose-1,6-bisphosphatase 2
ENST00000375337.4	MANE_select
ENST00000648117.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000375326.9	MANE_select
ENST00000375326.9	fructose-1,6-bisphosphatase 1
ENST00000414122.1	fructose-1,6-bisphosphatase 1
ENST00000662818.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000375315.7	align_id:3761359|asmbl_251524
ENST00000375315.7	novel protein (FLJ14675)
ENST00000277198.6	continued as bA54O15.1.2 in Em:AL353768
ENST00000277198.6	novel protein (FLJ14675)
ENST00000297979.9	novel protein (FLJ14675)
ENST00000427193.1	novel protein (FLJ14675)
ENST00000489318.1	novel transcript
ENST00000424143.5	novel protein (FLJ14675)
ENST00000488186.5	novel transcript
ENST00000473778.5	novel transcript
ENST00000462125.5	novel transcript
ENST00000479161.5	continued as bA80I15.3.5 in Em:AL354893
ENST00000479161.5	novel transcript
ENST00000451893.5	novel protein (FLJ14675)
ENST00000460573.5	novel transcript
ENST00000478603.5	novel transcript
ENST00000471978.5	novel transcript
ENST00000445181.5	ncontinued from bA54O15.1.11 in Em:AL353768
ENST00000445181.5	novel protein (FLJ14675)
ENST00000478473.1	novel protein (FLJ14675)
ENST00000496567.5	novel transcript
ENST00000463372.5	novel transcript
ENST00000482056.2	novel transcript
ENST00000489562.5	novel transcript
ENST00000468164.1	novel transcript
ENST00000437846.1	novel transcript
ENST00000416455.1	novel transcript
ENST00000439872.1	novel transcript
ENST00000649093.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000289081.8	CARS
ENST00000289081.8	LR annotation
ENST00000289081.8	MANE_select
ENST00000375305.6	alternative 5' UTR
ENST00000375305.6	fanconi anemia, complementation group C
ENST00000375305.6	variant 2; alternatively spliced in 5' UTR
ENST00000464627.5	fanconi anemia, complementation group C
ENST00000480712.5	fanconi anemia, complementation group C
ENST00000477942.5	fanconi anemia, complementation group C
ENST00000464653.1	fanconi anemia, complementation group C
ENST00000493098.1	fanconi anemia, complementation group C
ENST00000474949.1	fanconi anemia, complementation group C
ENST00000647778.1	alternative 5' UTR
ENST00000433829.1	alternative 5' UTR
ENST00000433829.1	fanconi anemia, complementation group C
ENST00000433829.1	variant 3; alternatively spliced in 5' UTR
ENST00000647882.1	alternative 5' UTR
ENST00000650176.1	NMD likely if extended
ENST00000649611.1	alternative 5' UTR
ENST00000433644.2	putative novel transcript
ENST00000423075.1	putative novel transcript
ENST00000433735.1	ribosomal protein S26 (RPS26) pseudogene
ENST00000331920.11	MANE_select
ENST00000331920.11	patched homolog (Drosophila)
ENST00000430669.6	NP_001077071.1
ENST00000430669.6	patched homolog (Drosophila)
ENST00000429896.6	NP_001077075.1
ENST00000429896.6	patched homolog (Drosophila)
ENST00000375274.6	NP_001077072.1
ENST00000375271.4	patched homolog (Drosophila)
ENST00000488809.2	patched homolog (Drosophila)
ENST00000553011.5	alternative 5' UTR
ENST00000551845.5	alternative 5' UTR
ENST00000547672.5	alternative 5' UTR
ENST00000546820.5	alternative 5' UTR
ENST00000647736.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000419620.1	novel transcript
ENST00000422343.1	putative novel transcript
ENST00000412446.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660645.1	Assembled from SLRseq reads (SRP049776)
ENST00000660143.1	Assembled from SLRseq reads (SRP049776)
ENST00000669049.1	Assembled from SLRseq reads (SRP049776)
ENST00000657579.1	Assembled from SLRseq reads (SRP049776)
ENST00000427259.1	novel transcript
ENST00000670189.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671508.1	Assembled from SLRseq reads (SRP049776)
ENST00000448465.1	novel transcript
ENST00000649169.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000653738.2	CAGE supported TSS
ENST00000653738.2	LR annotation
ENST00000653738.2	MANE_select
ENST00000653738.2	upstream ATG
ENST00000288985.12	novel protein containing SNF2 family N-terminal and Helicase conserved C-terminal domains
ENST00000432783.1	novel transcript
ENST00000661937.1	Assembled from SLRseq reads (SRP049776)
ENST00000649171.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000649171.2	Assembled from SLRseq reads (SRP049776)
ENST00000666931.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000375263.8	CAGE supported TSS
ENST00000375263.8	LR annotation
ENST00000375263.8	MANE_select
ENST00000448857.1	novel transcript
ENST00000253270.13	MANE_select
ENST00000375256.5	MANE_select
ENST00000375256.5	novel zinc finger protein
ENST00000658405.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656770.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000375249.5	MANE_select
ENST00000375249.5	hyaluronan binding protein 4
ENST00000375251.7	hyaluronan binding protein 4
ENST00000466976.1	hyaluronan binding protein 4, (IHABP4, Ki-1/57)
ENST00000375241.6	MANE_select
ENST00000375242.7	NP_001070649.1
ENST00000411939.5	novel protein
ENST00000446045.1	novel protein
ENST00000375234.8	MANE_select
ENST00000375234.8	novel protein
ENST00000464512.1	novel transcript
ENST00000661289.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661289.1	putative novel transcript
ENST00000423924.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656729.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655560.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656163.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659200.1	Assembled from SLRseq reads (SRP049776)
ENST00000653137.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666834.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000223428.9	MANE_select
ENST00000223428.9	alternative 5' UTR
ENST00000375231.5	novel protein (KIAA0972)
ENST00000472201.1	novel transcript
ENST00000374641.3	novel protein (KIAA0972)
ENST00000481138.6	MANE_select
ENST00000478850.5	alternative 5' UTR
ENST00000652726.1	novel protein similar to MGC12954
ENST00000354649.7	novel protein similar to DKFZP434I1117
ENST00000372322.4	MANE_select
ENST00000372322.4	novel protein similar to DKFZP434I1117
ENST00000372322.4	partial
ENST00000372322.4	possible pseudogene
ENST00000259470.6	MANE_select
ENST00000259470.6	cathepsin L2 (CTSU, CTSV, CATL2)
ENST00000681927.1	alternative 5' UTR
ENST00000681927.1	cathepsin L2 (CTSU, CTSV, CATL2)
ENST00000681737.1	alternative 5' UTR
ENST00000679661.1	alternative 5' UTR
ENST00000680787.1	alternative 3' UTR
ENST00000680787.1	alternative 5' UTR
ENST00000411675.1	vomeronasal 1 pseudogene
ENST00000662325.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658061.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665781.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669219.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420204.1	putative novel transcript
ENST00000529487.3	MANE_select
ENST00000471314.1	novel transcript
ENST00000430691.1	pseudogene similar to part of ral guanine nucleotide dissociation stimulator (RALGDS)
ENST00000667253.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000355295.5	MANE_select
ENST00000355295.5	tudor repeat associator with PCTAIRE 2 (PCTAIRE2BP)
ENST00000492428.1	tudor repeat associator with PCTAIRE 2 (PCTAIRE2BP)
ENST00000259365.9	MANE_select
ENST00000259365.9	tropomodulin (ETMOD, D9S57E)
ENST00000375175.1	tropomodulin (ETMOD, D9S57E)
ENST00000451595.7	putative novel transcript
ENST00000609957.1	454 RNA-Seq supported
ENST00000375173.1	novel protein PP4189 (LOC158427)
ENST00000341170.5	MANE_select
ENST00000341170.5	novel protein PP4189 (LOC158427)
ENST00000375172.6	cc-conserved
ENST00000375172.6	novel protein PP4189 (LOC158427)
ENST00000375165.5	novel protein PP4189 (LOC158427)
ENST00000375163.5	novel protein PP4189 (LOC158427)
ENST00000484708.1	novel transcript
ENST00000478100.3	nuclear cap binding protein subunit 1, 80kDa (NCBP, CBP80)
ENST00000375147.8	MANE_select
ENST00000375147.8	continues from bA244N9.3.1 in Em:AL162385
ENST00000375147.8	nuclear cap binding protein subunit 1, 80kDa (NCBP, CBP80)
ENST00000375130.2	nuclear cap binding protein subunit 1, 80kDa (NCBP, CBP80)
ENST00000491445.1	nuclear cap binding protein subunit 1, 80kDa (NCBP, CBP80)
ENST00000437864.1	putative novel transcript
ENST00000462523.5	xeroderma pigmentosum, complementation group A (XP1, XPAC)
ENST00000375128.5	MANE_select
ENST00000375128.5	xeroderma pigmentosum, complementation group A (XP1, XPAC)
ENST00000485042.1	xeroderma pigmentosum, complementation group A (XP1, XPAC)
ENST00000496104.1	xeroderma pigmentosum, complementation group A (XP1, XPAC)
ENST00000375123.5	MANE_select
ENST00000375123.5	forkhead box E1 (thyroid transcription factor 2) (TTF2, TITF2, TTF-2, FKHL15)
ENST00000375119.8	MANE_select
ENST00000375119.8	Nef associated protein 1 (NAP1)
ENST00000375118.1	Nef associated protein 1 (NAP1)
ENST00000478126.5	Nef associated protein 1 (NAP1)
ENST00000375117.8	Nef associated protein 1 (NAP1)
ENST00000471580.1	Nef associated protein 1 (NAP1)
ENST00000455506.1	Nef associated protein 1 (NAP1)
ENST00000660312.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000616898.2	MANE_select
ENST00000616898.2	genebuild_only_MANE
ENST00000259456.7	hemogen (EDAG, EDAG-1)
ENST00000339399.5	MANE_select
ENST00000339399.5	acidic (leucine-rich) nuclear phosphoprotein 32 family, member B (APRIL, SSP29, PHAPI2)
ENST00000473205.1	acidic (leucine-rich) nuclear phosphoprotein 32 family, member B (APRIL, SSP29, PHAPI2)
ENST00000486769.1	acidic (leucine-rich) nuclear phosphoprotein 32 family, member B (APRIL, SSP29, PHAPI2)
ENST00000411981.1	putative novel transcript
ENST00000210444.6	MANE_select
ENST00000210444.6	N-acetylneuraminic acid synthase (sialic acid synthase) (SAS)
ENST00000495319.1	N-acetylneuraminic acid synthase (sialic acid synthase) (SAS)
ENST00000480925.1	N-acetylneuraminic acid synthase (sialic acid synthase) (SAS)
ENST00000461452.1	N-acetylneuraminic acid synthase (sialic acid synthase) (SAS)
ENST00000415280.1	N-acetylneuraminic acid synthase (sialic acid synthase) (SAS)
ENST00000427646.1	N-acetylneuraminic acid synthase (sialic acid synthase) (SAS)
ENST00000375098.7	alternative 3' UTR
ENST00000478530.1	tripartite motif-containing 14 (KIAA0129)
ENST00000341469.7	MANE_select
ENST00000342043.3	alternative 3' UTR
ENST00000343933.9	Coronin, actin-binding protein, 2A (IR10,WDR2)
ENST00000375077.5	Coronin, actin-binding protein, 2A (IR10,WDR2)
ENST00000375077.5	MANE_select
ENST00000465784.7	MANE_select
ENST00000465784.7	genebuild_only_MANE
ENST00000375063.5	TBC1 domain family, member 2 (PARIS1, PARIS-1,DKFZP761D1823, DKFZp761D1823)
ENST00000375064.5	TBC1 domain family, member 2 (PARIS1, PARIS-1,DKFZP761D1823, DKFZp761D1823)
ENST00000342112.9	TBC1 domain family, member 2 (PARIS1, PARIS-1,DKFZP761D1823, DKFZp761D1823)
ENST00000375066.6	TBC1 domain family, member 2 (PARIS1, PARIS-1,DKFZP761D1823, DKFZp761D1823)
ENST00000493589.2	TBC1 domain family, member 2 (PARIS1, PARIS-1,DKFZP761D1823, DKFZp761D1823)
ENST00000493589.2	non canonical TEC
ENST00000259455.4	G protein-coupled receptor 51 (HG20, GABBR2, GPRC3B, GABABR2)
ENST00000259455.4	MANE_select
ENST00000477471.1	G protein-coupled receptor 51 (HG20, GABBR2, GPRC3B, GABABR2)
ENST00000353234.5	DKFZp686D24121
ENST00000353234.5	MANE_select
ENST00000634393.1	NMD likely if extended
ENST00000466120.1	novel transcript
ENST00000647710.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000375011.4	MANE_select
ENST00000375011.4	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)
ENST00000470473.1	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)
ENST00000433997.1	putative novel transcript
ENST00000449172.1	non-metastatic cells 2, protein (NM23B) expressed in (NME2) pseudogene
ENST00000375001.8	MANE_select
ENST00000547314.5	alternative 5' UTR
ENST00000374990.6	NP_001124388.1
ENST00000374994.9	MANE_select
ENST00000374994.9	transforming growth factor, beta receptor I (activin A receptor type II-like kinase, 53kDa)
ENST00000548365.5	alternative 5' UTR
ENST00000450399.1	putative novel transcript
ENST00000476832.2	MANE_select
ENST00000498603.5	protein translocation complex beta (SEC61B)
ENST00000223641.5	MANE_select
ENST00000223641.5	protein translocation complex beta (SEC61B)
ENST00000481573.1	protein translocation complex beta (SEC61B)
ENST00000604258.5	LOC100996569
ENST00000659797.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649719.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000662751.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652827.1	Assembled from SLRseq reads (SRP049776)
ENST00000427039.1	novel transcript (FLJ32899)
ENST00000655615.1	Assembled from SLRseq reads (SRP049776)
ENST00000662355.1	Assembled from SLRseq reads (SRP049776)
ENST00000657190.1	Assembled from SLRseq reads (SRP049776)
ENST00000529965.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000529965.3	Assembled from SLRseq reads (SRP049776)
ENST00000671436.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413271.1	putative novel transcript
ENST00000338488.8	nuclear receptor subfamily 4, group A, member 3
ENST00000395097.7	MANE_select
ENST00000395097.7	nuclear receptor subfamily 4, group A, member 3
ENST00000330847.1	nuclear receptor subfamily 4, group A, member 3
ENST00000259400.11	MANE_select
ENST00000259400.11	syntaxin 17
ENST00000531035.5	alternative 5' UTR
ENST00000525640.5	alternative 5' UTR
ENST00000534052.1	alternative 5' UTR
ENST00000526607.1	alternative 5' UTR
ENST00000262455.7	MANE_select
ENST00000262455.7	thioredoxin domain containing 4 (endoplasmic reticulum) (ERP44, ERp44,KIAA0573)
ENST00000262457.7	MANE_select
ENST00000262457.7	inversin
ENST00000496467.5	inversin
ENST00000480309.1	inversin
ENST00000262456.6	inversin
ENST00000374921.3	inversin
ENST00000466647.5	inversin
ENST00000460636.2	inversin
ENST00000443417.1	ribosomal protein S2 (RPS2) pseudogene
ENST00000374902.9	MANE_select
ENST00000477648.1	novel transcript
ENST00000429235.1	novel protein (FLJ20287)
ENST00000395067.7	MANE_select
ENST00000398977.2	alternative 5' UTR
ENST00000374886.7	alternative 5' UTR
ENST00000489377.1	novel transcript
ENST00000374879.5	MANE_select
ENST00000307584.6	MANE_select
ENST00000457882.1	ribosomal protein L24 (RPL24) pseudogene
ENST00000436818.2	glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene
ENST00000374874.8	MANE_select
ENST00000456287.5	alternative 5' UTR
ENST00000456287.5	continued as bA35N6.1.5 in Em:AL359893
ENST00000456287.5	continues from bA70K10.1.5 in Em:AL161631
ENST00000456287.5	novel protein (FLJ20300)
ENST00000494890.5	novel transcript
ENST00000395056.2	alternative 5' UTR
ENST00000395056.2	continued as bA35N6.1.2 in Em:AL359893
ENST00000395056.2	continues from bA70K10.1.2 in Em:AL161631
ENST00000395056.2	novel protein (FLJ20300)
ENST00000395056.2	shares CDS with bA70K10.1.1
ENST00000463206.1	novel transcript
ENST00000417933.1	pseudogene similar to part of the transient receptor potential cation channel (TRP) family of proteins
ENST00000259407.7	MANE_select
ENST00000259407.7	bile acid Coenzyme A: amino acid N-acyltransferase (glycine N-choloyltransferase) (BAT)
ENST00000395051.4	alternative 5' UTR
ENST00000674556.1	alternative 5' UTR
ENST00000374865.5	MANE_select
ENST00000374865.5	mitochondrial ribosomal protein L50 (MRP-L50, FLJ20493) (mitochondrial 39S ribosomal protein L50)
ENST00000374861.7	zinc finger protein 189
ENST00000259395.4	zinc finger protein 189
ENST00000339664.6	zinc finger protein 189
ENST00000647789.2	CAGE supported TSS
ENST00000647789.2	LR annotation
ENST00000647789.2	MANE_select
ENST00000648064.1	CAGE supported TSS
ENST00000648064.1	upstream ATG
ENST00000648758.1	CAGE supported TSS
ENST00000648758.1	alternative 5' UTR
ENST00000468981.3	aldolase B, fructose-bisphosphate
ENST00000468981.3	non canonical TEC
ENST00000648423.1	alternative 5' UTR
ENST00000666720.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000424154.6	Assembled from SLRseq reads (SRP049776)
ENST00000424154.6	novel transcript
ENST00000450109.5	novel transcript
ENST00000431507.5	novel transcript
ENST00000425734.1	novel transcript
ENST00000374848.8	MANE_select
ENST00000374848.8	novel protein
ENST00000374847.5	alternative 5' UTR
ENST00000374847.5	alternatively spliced 5' UTR, shares CDS with bA490D19.7.1
ENST00000374847.5	novel protein
ENST00000374851.1	alternative 5' UTR
ENST00000374851.1	alternatively spliced 5' UTR, shares CDS with bA490D19.7.1
ENST00000374851.1	novel protein
ENST00000482920.1	novel transcript
ENST00000389120.8	MANE_select
ENST00000374819.6	alternative 5' UTR
ENST00000479306.5	alternative 5' UTR
ENST00000466817.1	alternative 5' UTR
ENST00000361820.6	CAGE supported TSS
ENST00000361820.6	MANE_select
ENST00000479772.1	glutamate receptor, ionotropic, N-methyl-D-aspartate 3A (NR3A, NMDAR-L)
ENST00000374806.2	MANE_select
ENST00000374798.8	MANE_select
ENST00000374798.8	NMD exception
ENST00000374798.8	alternative 3' UTR
ENST00000487798.5	NMD exception
ENST00000429577.1	pseudogene similar to part of NADH dehydrogenase 5 (MTND5)
ENST00000411575.5	novel transcript
ENST00000425157.2	putative novel transcript
ENST00000455051.2	novel transcript
ENST00000421507.2	putative novel transcript
ENST00000664068.1	Assembled from SLRseq reads (SRP049776)
ENST00000440179.5	SMC2 structural maintenance of chromosomes 2-like 1 (yeast) (CAPE, CAP-E, hCAP-E)
ENST00000374793.8	MANE_select
ENST00000374793.8	SMC2 structural maintenance of chromosomes 2-like 1 (yeast) (CAPE, CAP-E, hCAP-E)
ENST00000374787.7	SMC2 structural maintenance of chromosomes 2-like 1 (yeast) (CAPE, CAP-E, hCAP-E)
ENST00000374787.7	alternative 5' UTR
ENST00000374787.7	alternatively spliced 5' UTR, shares CDS with bA82L2.1.1
ENST00000493955.1	SMC2 structural maintenance of chromosomes 2-like 1 (yeast) (CAPE, CAP-E, hCAP-E)
ENST00000334726.3	MANE_select
ENST00000668299.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658313.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663828.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653242.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000277216.3	MANE_select
ENST00000335040.1	MANE_select
ENST00000374779.3	MANE_select
ENST00000542196.2	MANE_select
ENST00000259362.1	MANE_select
ENST00000374767.5	MANE_select
ENST00000374767.5	novel protein (DKFZp564D177)
ENST00000471001.1	novel transcript
ENST00000374762.4	MANE_select
ENST00000374762.4	novel protein (FLJ11275)
ENST00000460936.5	novel protein (FLJ11275)
ENST00000461177.1	novel transcript
ENST00000374736.8	ATP-binding cassette, sub-family A (ABC1), member 1 (TGD, CERP, HDLDT1)
ENST00000374736.8	MANE_select
ENST00000494467.1	ATP-binding cassette, sub-family A (ABC1), member 1 (TGD, CERP, HDLDT1)
ENST00000423487.6	ATP-binding cassette, sub-family A (ABC1), member 1 (FLJ14266, TGD, CERP, HDLDT1)
ENST00000374733.1	ATP-binding cassette, sub-family A (ABC1), member 1 (TGD, CERP, HDLDT1)
ENST00000661986.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654661.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665890.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658693.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659359.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670487.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000457720.1	putative novel transcript
ENST00000665997.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666856.1	Assembled from SLRseq reads (SRP049776)
ENST00000470972.5	CDw92 antigen (CDW92) (CTL1, choline transporter-like protein)
ENST00000374720.8	MANE_select
ENST00000374720.8	alternative 3' UTR
ENST00000436716.1	QC splicing correct
ENST00000481272.6	MANE_select
ENST00000374707.1	cystatin and DUF19 domain containing 1 (similar to fibronectin type 3 and SPRY domain-containing protein (FSD1))
ENST00000443361.1	pseudogene similar to KIAA1272, KIAA0884, Drosophila CG5521 and rat Tulip 1 and 2 proteins
ENST00000421614.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000421614.2	putative novel transcript
ENST00000357998.10	MANE_select
ENST00000357998.10	alternative 5' UTR
ENST00000490134.1	Fukuyama type congenital muscular dystrophy protein (fukutin)
ENST00000479846.1	Fukuyama type congenital muscular dystrophy protein (fukutin)
ENST00000642644.1	alternative 3' UTR
ENST00000645933.1	alternative 3' UTR
ENST00000642952.1	alternative 3' UTR
ENST00000623713.1	confirm experimentally
ENST00000334077.6	MANE_select
ENST00000374692.8	MANE_select
ENST00000374692.8	novel protein (FLJ10493)
ENST00000434214.1	alternative 5' UTR
ENST00000434214.1	alternatively spliced 5' UTR, shares CDS with bA169B16.1.2
ENST00000434214.1	novel protein
ENST00000374688.5	novel protein
ENST00000435034.5	novel protein
ENST00000451560.1	novel protein
ENST00000443781.1	FUS interacting protein (serine-arginine rich) 1 (FUSIP1) pseudogene
ENST00000435485.5	novel transcript
ENST00000659247.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666690.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666690.1	novel transcript
ENST00000655266.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670335.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665119.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665119.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000664703.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656689.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665373.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668979.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425709.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664212.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653693.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668842.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664960.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656069.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665947.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663705.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665889.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659198.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663508.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658295.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655864.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658723.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667292.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000411451.2	novel transcript (FLJ36044)
ENST00000445897.2	novel transcript
ENST00000430534.1	novel transcript
ENST00000446206.1	novel transcript
ENST00000662996.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657970.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000428997.1	pseudogene similar to part of constitutive photomorphogenic protein, (COP1)
ENST00000277225.10	MANE_select
ENST00000277225.10	novel zinc finger protein (FLJ14960, KIAA1803)
ENST00000374686.6	novel zinc finger protein (FLJ14960, KIAA1803)
ENST00000441147.6	NAGNAG splice site
ENST00000497489.5	novel transcript
ENST00000497489.5	this variant and one or more of variant fragments .1.3 .1.6 and .1.7 could be part of one single variant
ENST00000469433.5	novel transcript
ENST00000469433.5	this variant and one or more of variant fragments .1.6 and .1.7 could be part of one single variant
ENST00000479166.1	novel transcript
ENST00000479166.1	this variant and one or more of variant fragments .1.5, .1.6 and .1.7 could be part of one single variant
ENST00000427098.1	novel zinc finger protein (FLJ14960, KIAA1803)
ENST00000427098.1	this variant and one or more of variant fragments .1.5 and .1.6 could be part of one single variant
ENST00000482115.1	novel transcript
ENST00000482115.1	this variant and one or more of variant fragments .1.4, .1.5, .1.6 and .1.8 could be part of one single variant
ENST00000483287.1	novel transcript
ENST00000483287.1	this variant and one or more of variant fragments .1.3, .1.4, .1.5, .1.7 and .1.8 could be part of one single variant
ENST00000418656.1	FLJ40387
ENST00000444758.1	ribosomal protein L7a (RPL7A) pseudogene
ENST00000417622.2	novel pseudogene
ENST00000427833.1	novel transcript
ENST00000419616.5	RA23B homolog B (S. cerevisiae) (P58, HR23B, HHR23B)
ENST00000419616.5	alternative 5' UTR
ENST00000419616.5	alternatively spliced in 5' UTR, shares CDS with bA131A5.1.1
ENST00000358015.8	MANE_select
ENST00000358015.8	RA23B homolog B (S. cerevisiae) (P58, HR23B, HHR23B)
ENST00000442587.1	RA23B homolog B (S. cerevisiae) (P58, HR23B, HHR23B)
ENST00000457811.1	RA23B homolog B (S. cerevisiae) (P58, HR23B, HHR23B)
ENST00000457811.1	this variant and either of variant fragments .1.3 or .1.2 could be part of one single variant
ENST00000659615.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654319.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000423523.1	novel transcript
ENST00000415302.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655513.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655513.1	novel transcript
ENST00000662966.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000444648.1	high-mobility group nucleosomal binding domain 2 (HMGN2) pseudogene
ENST00000374672.5	MANE_select
ENST00000374672.5	NP_004226.3
ENST00000420475.1	alternative 5' UTR
ENST00000454576.1	ribosomal protein S16 (RPS16) pseudogene
ENST00000449233.1	small EDRK-rich factor 2 (SERF2) pseudogene
ENST00000449183.1	ribosomal protein S15a (RPS15A) pseudogene
ENST00000394891.3	ribosomal protein L31 (RPL31) pseudogene
ENST00000453455.1	putative novel transcript
ENST00000306634.3	ribosomal protein L36 (RPL36) pseudogene
ENST00000426082.1	ribosomal protein L36A (RPL36A) pseudogene
ENST00000374667.5	MANE_select
ENST00000374667.5	actin-like 7B
ENST00000333999.5	MANE_select
ENST00000333999.5	actin-like 7A
ENST00000675078.1	inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
ENST00000374647.10	MANE_select
ENST00000374647.10	inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
ENST00000675406.1	alternative 5' UTR
ENST00000537196.1	upstream uORF
ENST00000467959.1	inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
ENST00000322940.11	MANE_select
ENST00000322940.11	chromosome 9 open reading frame 6
ENST00000466200.1	chromosome 9 open reading frame 6
ENST00000374624.7	chromosome 9 open reading frame 6
ENST00000445175.1	chromosome 9 open reading frame 6
ENST00000374595.8	catenin (cadherin-associated protein), alpha-like 1
ENST00000325551.9	MANE_select
ENST00000325551.9	catenin (cadherin-associated protein), alpha-like 1
ENST00000374594.1	catenin (cadherin-associated protein), alpha-like 1
ENST00000488130.1	catenin (cadherin-associated protein), alpha-like 1
ENST00000374593.4	catenin (cadherin-associated protein), alpha-like 1
ENST00000374586.8	MANE_select
ENST00000374586.8	NP_114401.2
ENST00000482868.1	chromosome 9 open reading frame 5
ENST00000561981.5	MANE_select
ENST00000561981.5	upstream ATG
ENST00000644736.1	alternative 3' UTR
ENST00000374566.8	MANE_select
ENST00000374566.8	erythrocyte membrane protein band 4.1 like 4B
ENST00000374566.8	frame shift in exon 25 changes proetin translation from that in Tr:Q9H329
ENST00000374557.4	erythrocyte membrane protein band 4.1 like 4B
ENST00000423638.1	NADH dehydrogenase subunit 2 pseudogene
ENST00000374541.4	MANE_select
ENST00000374541.4	protein tyrosine phosphatase, non-receptor type 3
ENST00000497739.1	protein tyrosine phosphatase, non-receptor type 3
ENST00000674068.1	CAGE supported TSS
ENST00000374531.6	NP_001032370.1
ENST00000314527.9	NP_443749.4
ENST00000374530.7	CCDS35100.1
ENST00000374530.7	NP_009134.1
ENST00000302798.7	NP_671492.1
ENST00000485762.1	A kinase (PRKA) anchor protein 2
ENST00000449258.1	putative novel transcript
ENST00000418441.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000473442.1	QC splicing correct
ENST00000400613.5	MANE_select
ENST00000400613.5	novel protein
ENST00000374517.6	MANE_select
ENST00000374517.6	thioredoxin (TRX)
ENST00000374515.9	thioredoxin (TRX)
ENST00000487892.1	thioredoxin (TRX)
ENST00000423740.7	MANE_select
ENST00000374510.8	novel protein similar to thioredoxin (TXN)
ENST00000374507.4	novel protein similar to thioredoxin (TXN)
ENST00000374469.6	MANE_select
ENST00000476205.1	novel transcript
ENST00000467821.1	novel transcript (FLJ14964)
ENST00000374461.1	likely ortholog of mouse polydom (POLYDOM)
ENST00000374461.1	likely ortholog of mouse polydom (POLYDOM) (contains FLJ13529)
ENST00000451108.1	putative novel transcript
ENST00000416899.7	muscle, skeletal, receptor tyrosine kinase
ENST00000374448.9	MANE_select
ENST00000374439.1	muscle, skeletal, receptor tyrosine kinase
ENST00000374438.1	muscle, skeletal, receptor tyrosine kinase
ENST00000446460.1	ribosomal protein S21 (RPS21) pseudogene
ENST00000374430.6	alternative 5' UTR
ENST00000358883.8	alternative 5' UTR
ENST00000441240.1	alternative 5' UTR
ENST00000426204.1	putative novel transcript
ENST00000302681.2	ENA ID EGAS00001001486
ENST00000302681.2	NCBI GEO ID GSE80249
ENST00000338205.9	novel protein (includes KIAA0368)
ENST00000374383.1	novel protein (includes KIAA0368)
ENST00000465499.1	novel transcript
ENST00000358151.8	KIAA1962 protein similar to zinc finger protein HIT-10
ENST00000309235.6	KIAA1962 protein similar to zinc finger protein HIT-10
ENST00000309235.6	MANE_select
ENST00000374374.3	KIAA1962 protein similar to zinc finger protein HIT-10
ENST00000407693.7	MANE_select
ENST00000407693.7	genebuild_only_MANE
ENST00000466771.6	leukotriene B4 12-hydroxydehydrogenase (MGC34943)
ENST00000309195.9	leukotriene B4 12-hydroxydehydrogenase (MGC34943)
ENST00000374324.5	leukotriene B4 12-hydroxydehydrogenase (MGC34943)
ENST00000422125.1	leukotriene B4 12-hydroxydehydrogenase (MGC34943)
ENST00000374313.5	leukotriene B4 12-hydroxydehydrogenase (MGC34943)
ENST00000374308.1	leukotriene B4 12-hydroxydehydrogenase (MGC34943)
ENST00000485319.1	leukotriene B4 12-hydroxydehydrogenase (MGC34943)
ENST00000450154.1	putative novel transcript
ENST00000649725.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000313525.4	MANE_select
ENST00000463589.5	non-organsim_supported
ENST00000374293.5	MANE_select
ENST00000394779.7	FLJ44067
ENST00000374283.5	FLJ32779
ENST00000374279.4	MANE_select
ENST00000374279.4	UDP-glucose ceramide glucosyltransferase
ENST00000489355.1	UDP-glucose ceramide glucosyltransferase
ENST00000490110.5	UDP-glucose ceramide glucosyltransferase
ENST00000495085.1	UDP-glucose ceramide glucosyltransferase
ENST00000474306.1	UDP-glucose ceramide glucosyltransferase
ENST00000658557.1	Assembled from SLRseq reads (SRP049776)
ENST00000374270.8	MANE_select
ENST00000355396.7	novel protein (contains DKFZP761E1824)
ENST00000415074.1	novel protein
ENST00000482851.1	novel transcript
ENST00000451825.1	ribosomal protein L29 (RPL29) pseudogene
ENST00000374257.6	MANE_select
ENST00000374257.6	regulator of differentiation 1
ENST00000374255.6	regulator of differentiation 1
ENST00000343327.6	regulator of differentiation 1
ENST00000487997.1	regulator of differentiation 1
ENST00000210227.4	regulator of differentiation 1
ENST00000450374.1	regulator of differentiation 1
ENST00000448036.1	ribosomal protein L32 (RPL32) pseudogene
ENST00000398803.1	novel protein (MGC10940)
ENST00000488101.5	novel protein
ENST00000398805.8	MANE_select
ENST00000398805.8	novel protein
ENST00000467434.5	novel transcript
ENST00000480881.1	QC splicing correct
ENST00000480881.1	novel transcript
ENST00000656504.1	Assembled from SLRseq reads (SRP049776)
ENST00000412934.2	alternative 3' UTR
ENST00000457681.1	novel protein
ENST00000460965.1	novel transcript
ENST00000463223.1	putative novel transcript
ENST00000337530.11	MANE_select
ENST00000337530.11	novel protein
ENST00000374244.3	novel protein
ENST00000502685.1	vacuolar protein sorting 33B (VPS33B) pseudogene
ENST00000374242.9	MANE_select
ENST00000374242.9	novel gene (HSPC043)
ENST00000497712.6	QC splicing correct
ENST00000497712.6	novel transcript
ENST00000374236.5	novel protein
ENST00000481146.6	novel transcript
ENST00000374234.1	novel protein
ENST00000476599.2	novel transcript
ENST00000440009.1	putative novel transcript
ENST00000671283.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000374232.8	MANE_select
ENST00000416585.1	novel protein similar to sorting nexin 7 (SNX7)
ENST00000604751.1	confirm experimentally
ENST00000604751.1	non canonical TEC
ENST00000374228.5	MANE_select
ENST00000491462.2	thymic stromal co-transporter
ENST00000638622.1	novel transcript (FLJ38524)
ENST00000374227.8	MANE_select
ENST00000374227.8	zinc finger protein 37 homolog (mouse)
ENST00000660977.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659571.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668459.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423546.1	novel transcript
ENST00000453010.2	Assembled from SLRseq reads (SRP049776)
ENST00000453010.2	novel transcript (DKFZp686A0127)
ENST00000259392.8	MANE_select
ENST00000238256.8	MANE_select
ENST00000238256.8	genebuild_only_MANE
ENST00000446284.6	novel protein (KIAA0674)
ENST00000489645.1	novel transcript
ENST00000489645.1	this variant and one of variant fragments .3 or .4 could be part of one single variant
ENST00000414250.2	novel protein (KIAA0674)
ENST00000493847.1	novel transcript
ENST00000493847.1	this variant and variant fragment .5 could be part of one single variant
ENST00000462889.1	novel transcript
ENST00000462889.1	this variant and variant fragment .5 could be part of one single variant
ENST00000374212.5	MANE_select
ENST00000374212.5	solute carrier family 31 (copper transporters), member 1 (CTR1, COPT1)
ENST00000496650.1	solute carrier family 31 (copper transporters), member 1 (CTR1, COPT1)
ENST00000490408.5	novel transcript
ENST00000374206.4	CDC26 subunit of anaphase promoting complex (CDC26)
ENST00000374206.4	MANE_select
ENST00000374199.9	PRP4 pre-mRNA processing factor 4 homolog (yeast) (HPRP4, Prp4p, HPRP4P)
ENST00000374198.5	CAGE supported TSS
ENST00000374198.5	MANE_select
ENST00000374198.5	PRP4 pre-mRNA processing factor 4 homolog (yeast) (HPRP4, Prp4p, HPRP4P)
ENST00000488937.1	PRP4 pre-mRNA processing factor 4 homolog (yeast) (HPRP4, Prp4p, HPRP4P)
ENST00000441031.3	alternative 5' UTR
ENST00000416588.2	alternative 5' UTR
ENST00000478815.1	alternative 5' UTR
ENST00000374193.9	MANE_select
ENST00000374183.5	MANE_select
ENST00000374183.5	novel protein similar to B-box and SPRY-domain containing protein (BSPRY) (FLJ20150)
ENST00000462085.1	novel transcript
ENST00000238379.9	novel protein (FLJ39748)
ENST00000374180.3	alternative 5' UTR
ENST00000374180.3	alternatively spliced 5' UTR, shares CDS with bA10I9.3.1
ENST00000374180.3	novel protein (FLJ39748)
ENST00000485934.1	novel transcript
ENST00000409155.8	MANE_select
ENST00000448137.5	alternative 5' UTR
ENST00000452726.1	alternative 5' UTR
ENST00000445750.1	alternative 5' UTR
ENST00000374171.5	MANE_select
ENST00000374171.5	alternative 5' UTR
ENST00000374171.5	alternatively spliced 5' UTR, shares CDS with bA10I9.5.1
ENST00000490544.1	novel transcript
ENST00000288462.4	alternative 5' UTR
ENST00000288462.4	alternatively spliced 5' UTR, shares CDS with bA10I9.6.1
ENST00000288462.4	novel protein
ENST00000374165.6	MANE_select
ENST00000374165.6	novel protein
ENST00000488259.1	regulator of G-protein signalling 3 (C2PA, RGP3, FLJ20370, PDZ-RGS3)
ENST00000343817.9	NP_570613.2
ENST00000462143.5	alternative 5' UTR
ENST00000496275.5	regulator of G-protein signalling 3 (C2PA, RGP3, FLJ20370, PDZ-RGS3)
ENST00000471324.6	alternative 5' UTR
ENST00000467805.6	alternative 5' UTR
ENST00000467805.6	non canonical TEC
ENST00000462403.5	confirm experimentally
ENST00000620489.1	CAGE supported TSS
ENST00000428429.1	novel transcript
ENST00000428292.1	novel transcript
ENST00000398764.3	novel pseudogene
ENST00000374126.9	novel C2H2 type zinc finger protein
ENST00000452710.5	contiued from bA534I8.2.3 in Em:AL162393
ENST00000452710.5	novel C2H2 type zinc finger protein
ENST00000374124.4	contiued from bA534I8.2.2 in Em:AL162393
ENST00000374124.4	novel C2H2 type zinc finger protein
ENST00000481558.1	novel transcript
ENST00000470105.1	novel transcript
ENST00000265132.8	MANE_select
ENST00000466610.6	non canonical TEC
ENST00000498016.1	novel transcript
ENST00000640553.1	novel protein similar to mouse kinesin 12 (LOC113220)
ENST00000639832.1	novel transcript
ENST00000473174.1	novel transcript
ENST00000491059.1	novel transcript
ENST00000356083.8	MANE_select
ENST00000494090.6	novel transcript
ENST00000259396.8	orosomucoid 1 (AGP1, AGP-A)
ENST00000477456.1	orosomucoid 1 (AGP1, AGP-A)
ENST00000431067.4	MANE_select
ENST00000431067.4	orosomucoid 2 (AGP2, AGP-B)
ENST00000374088.8	AT-hook transcription factor AKNA
ENST00000374088.8	MANE_select
ENST00000492875.1	AT-hook transcription factor AKNA
ENST00000223791.7	AT-hook transcription factor AKNA
ENST00000491133.1	novel transcript
ENST00000312033.3	AT-hook transcription factor AKNA
ENST00000448674.1	CAGE supported TSS
ENST00000265134.10	novel protein (DKFZP434N014)
ENST00000362057.4	CAGE supported TSS
ENST00000362057.4	LR annotation
ENST00000362057.4	MANE_select
ENST00000362057.4	novel protein (DKFZP434N014)
ENST00000674048.1	novel protein (DKFZP434N014)
ENST00000374057.3	novel protein (DKFZP434N014)
ENST00000480518.1	novel transcript
ENST00000673697.1	alternative 5' UTR
ENST00000374050.4	ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G isoform 1 (ATP6G, ATP6GL)
ENST00000374050.4	MANE_select
ENST00000473413.1	ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G isoform 1 (ATP6G, ATP6GL)
ENST00000374049.4	novel protein (DKFZp547P234)
ENST00000288502.9	MANE_select
ENST00000288502.9	novel protein (DKFZp547P234)
ENST00000471206.1	novel transcript
ENST00000482552.1	novel transcript
ENST00000423632.3	CAGE supported TSS
ENST00000423632.3	MANE_select
ENST00000415101.1	putative novel transcript
ENST00000436752.3	MANE_select
ENST00000412010.1	pseudogene similar to part of ribosomal protein L7 (RPL7)
ENST00000374045.5	MANE_select
ENST00000374044.1	Protein translation differs to that published in Tr:O95150, with the third amino acid changed form R to H.
ENST00000374044.1	tumor necrosis factor (ligand) superfamily, member 15 (TL1, VEG1)
ENST00000649565.1	CAGE supported TSS
ENST00000647996.1	CAGE supported TSS
ENST00000374016.5	deleted in esophageal cancer 1 (DEC1)
ENST00000484171.2	novel transcript
ENST00000477580.5	novel transcript
ENST00000474301.1	tumor necrosis factor (ligand) superfamily, member 8 (CD153, CD30L, CD30LG)
ENST00000223795.3	MANE_select
ENST00000223795.3	tumor necrosis factor (ligand) superfamily, member 8 (CD153, CD30L, CD30LG)
ENST00000350763.9	MANE_select
ENST00000537320.5	confirm experimentally
ENST00000544972.1	not organism-supported
ENST00000460345.1	tenascin C (hexabrachion) (TN, HXB)
ENST00000498724.5	tenascin C (hexabrachion) (TN, HXB)
ENST00000476680.1	tenascin C (hexabrachion) (TN, H3B)
ENST00000473855.1	tenascin C (hexabrachion) (TN, HXB)
ENST00000635336.1	confirm experimentally
ENST00000481475.1	QC splicing correct
ENST00000481475.1	tenascin C (hexabrachion) (TN, HXB)
ENST00000534839.1	alternative 5' UTR
ENST00000423637.1	novel transcript
ENST00000444701.1	putative novel transcript
ENST00000433546.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000433546.3	QC splicing correct
ENST00000433546.3	novel transcript
ENST00000374014.3	EST-YD1 protein
ENST00000416507.1	putative novel transcript
ENST00000328252.4	MANE_select
ENST00000328252.4	pregnancy-associated plasma protein A
ENST00000460463.1	pregnancy-associated plasma protein A
ENST00000483254.1	pregnancy-associated plasma protein A
ENST00000438048.1	putative novel transcript
ENST00000313400.9	MANE_select
ENST00000288520.9	NP_937829.3
ENST00000417725.1	astrotactin2 (KIAA0634)
ENST00000358637.4	astrotactin 2 (KIAA0634)
ENST00000418250.1	novel transcript
ENST00000668122.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423715.1	novel transcript
ENST00000450136.2	CAGE supported TSS
ENST00000450136.2	MANE_select
ENST00000450136.2	alternative 5' UTR
ENST00000373983.2	tripartite motif-containing 32
ENST00000411410.1	tripartite motif-containing 32
ENST00000648160.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000436524.1	putative novel transcript
ENST00000657171.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000450938.1	novel transcript
ENST00000436855.1	ribosomal protein L35a (RPL35A) pseudogene
ENST00000665764.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000355622.8	CAGE supported TSS
ENST00000355622.8	LR annotation
ENST00000355622.8	MANE_select
ENST00000490685.1	toll-like receptor 4
ENST00000645182.2	Assembled from SLRseq reads (SRP049776)
ENST00000661126.1	Assembled from SLRseq reads (SRP049776)
ENST00000421509.2	QC splicing correct
ENST00000421509.2	novel transcript
ENST00000449730.1	novel transcript
ENST00000413759.1	tumor protein, translationally-controlled 1 (TPT1) pseudogene
ENST00000450292.1	putative novel transcript
ENST00000670605.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456032.1	putative novel transcript
ENST00000482797.1	deleted in bladder cancer chromosome region candidate 1 (IB3089A)
ENST00000265922.8	MANE_select
ENST00000265922.8	deleted in bladder cancer chromosome region candidate 1 (IB3089A)
ENST00000373964.2	deleted in bladder cancer chromosome region candidate 1 (IB3089A)
ENST00000454204.1	putative novel transcript
ENST00000349780.9	MANE_select
ENST00000360190.8	NP_001011649
ENST00000373930.4	MANE_select
ENST00000493559.1	F-box and WD-40 domain protein 2 (FBW2)
ENST00000608872.6	F-box and WD-40 domain protein 2 (FBW2)
ENST00000608872.6	MANE_select
ENST00000453291.1	F-box and WD-40 domain protein 2 (FBW2)
ENST00000474117.1	F-box and WD-40 domain protein 2 (FBW2)
ENST00000476481.1	F-box and WD-40 domain protein 2 (FBW2)
ENST00000437707.1	putative novel transcript
ENST00000210313.8	MANE_select
ENST00000476949.1	proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 (S5B, KIAA0072, MGC23145)
ENST00000640327.1	novel transcript
ENST00000640808.1	novel transcript
ENST00000373896.8	MANE_select
ENST00000373896.8	novel protein (DKFZP727G051)
ENST00000487555.5	novel protein (DKFZP727G051)
ENST00000462229.1	noel transcript
ENST00000436309.5	alternative 5' UTR
ENST00000312189.10	DKFZP727G051
ENST00000456291.1	alternative 5' UTR
ENST00000373887.8	MANE_select
ENST00000373887.8	TNF receptor-associated factor 1
ENST00000223642.3	MANE_select
ENST00000373855.7	MANE_select
ENST00000468952.5	novel transcript
ENST00000373851.6	centrosomal protein 1 (FAN, CEP110)
ENST00000373850.5	centrosomal protein 1 (FAN, CEP110)
ENST00000373847.5	centrosomal protein 1 (FAN, CEP110)
ENST00000431571.5	centrosomal protein 1 (FAN, CEP110)
ENST00000373845.6	centrosomal protein 1 (FAN, CEP110)
ENST00000373844.1	centrosomal protein 1 (FAN, CEP110)
ENST00000491018.1	centrosomal protein 1 (FAN, CEP110)
ENST00000373840.9	MANE_select
ENST00000373840.9	RAB14, member RAS oncogene family (DKFZp762K0911)
ENST00000451303.1	Alternatively spliced 5' UTR, shares CDS with bA165P4.3.1 (partial)
ENST00000451303.1	RAB14, member RAS oncogene family (DKFZp762K0911)
ENST00000451303.1	alternative 5' UTR
ENST00000432226.7	MANE_select
ENST00000483960.5	non canonical TEC
ENST00000477104.2	alternative 5' UTR
ENST00000437135.1	putative novel transcript
ENST00000286713.7	MANE_select
ENST00000286713.7	stomatin (BND7, EPB7, EPB72)
ENST00000347359.3	stomatin (BND7, EPB7, EPB72)
ENST00000658975.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440807.1	putative novel transcript
ENST00000481799.6	MANE_select
ENST00000373793.3	Might code for a severely truncated form of the enzyme
ENST00000436835.5	DAB2 interacting protein (AF9Q34, DIP1/2, KIAA1743)
ENST00000489314.1	CAGE supported TSS
ENST00000489314.1	DAB2 interacting protein (AF9Q34, DIP1/2, KIAA1743)
ENST00000465078.1	DAB2 interacting protein (AF9Q34, DIP1/2, KIAA1743)
ENST00000309989.1	DAB2 interacting protein (AF9Q34, DIP1/2, KIAA1743)
ENST00000648693.1	CAGE supported TSS
ENST00000487716.1	DAB2 interacting protein (AF9Q34, DIP1/2, KIAA1743)
ENST00000459906.1	DAB2 interacting protein (AF9Q34, DIP1/2, KIAA1743)
ENST00000434375.1	putative novel transcript
ENST00000321582.10	upstream ATG
ENST00000486362.1	putative novel transcript
ENST00000373778.5	novel protein (LOC158135)
ENST00000373778.5	novel transcript (LOC158135)
ENST00000487468.5	novel protein (LOC158135)
ENST00000487468.5	novel transcript (LOC158135)
ENST00000373776.5	novel protein (LOC158135)
ENST00000373776.5	upstream ATG
ENST00000411790.1	novel transcript (LOC253142)
ENST00000373768.4	MANE_select
ENST00000373768.4	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa
ENST00000373764.8	MANE_select
ENST00000373764.8	novel protein (LOC254956)
ENST00000373764.8	novel transcript (LOC254956)
ENST00000418632.1	novel protein (LOC254956)
ENST00000418632.1	novel transcript (LOC254956)
ENST00000486801.1	novel transcript
ENST00000477017.1	putative novel transcript
ENST00000482062.1	CAGE supported TSS
ENST00000464484.3	CAGE supported TSS
ENST00000560485.1	alternative 5' UTR
ENST00000559529.1	alternative 5' UTR
ENST00000417201.4	MANE_select
ENST00000417201.4	novel protein (MGC2734)
ENST00000491850.5	novel transcript
ENST00000483428.1	novel transcript
ENST00000344641.8	MANE_select
ENST00000344641.8	mitochondrial ribosome recycling factor (MRRF)
ENST00000441707.5	alternative 5' UTR
ENST00000441707.5	mitochondrial ribosome recycling factor (MRRF) (RRF, MRFF, MTRRF)
ENST00000373729.5	mitochondrial ribosome recycling factor (MRRF) (RRF, MRFF, MTRRF)
ENST00000373727.5	mitochondrial ribosome recycling factor (MRRF) (RRF, MRFF, MTRRF)
ENST00000373728.6	mitochondrial ribosome recycling factor (MRRF) (RRF, MRFF, MTRRF)
ENST00000470366.5	mitochondrial ribosome recycling factor (MRRF) (RRF, MRFF, MTRRF)
ENST00000373724.1	NMD likely if extended
ENST00000373724.1	mitochondrial ribosome recycling factor (MRRF) (RRF, MRFF, MTRRF)
ENST00000467864.5	mitochondrial ribosome recycling factor (MRRF) (RRF, MRFF, MTRRF)
ENST00000489572.5	mitochondrial ribosome recycling factor (MRRF) (RRF, MRFF, MTRRF)
ENST00000540753.6	CAGE supported TSS
ENST00000362012.7	LR annotation
ENST00000362012.7	MANE_select
ENST00000439471.2	QC splicing correct
ENST00000439471.2	putative novel transcript
ENST00000433572.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000433572.3	novel transcript
ENST00000412262.2	novel transcript
ENST00000419604.1	QC splicing correct
ENST00000419604.1	novel transcript
ENST00000259357.3	MANE_select
ENST00000335302.5	MANE_select
ENST00000340750.1	MANE_select
ENST00000304880.2	MANE_select
ENST00000373688.3	MANE_select
ENST00000641027.1	ENA ID EGAS00001001486
ENST00000297913.3	MANE_select
ENST00000623530.1	LOF variant in other haplotypes
ENST00000309623.1	MANE_select
ENST00000259466.1	MANE_select
ENST00000304720.3	ENA ID EGAS00001001486
ENST00000304720.3	MANE_select
ENST00000304720.3	NCBI GEO ID GSE80249
ENST00000436632.5	phosducin-like
ENST00000259467.9	MANE_select
ENST00000259467.9	phosducin-like
ENST00000394285.3	phosducin-like
ENST00000277309.3	MANE_select
ENST00000357244.7	MANE_select
ENST00000357244.7	genebuild_only_MANE
ENST00000335387.9	non canonical polymorphism
ENST00000478216.1	novel transcript
ENST00000373659.4	MANE_select
ENST00000373659.4	zinc finger protein with interaction domain (ZID)
ENST00000373656.4	MANE_select
ENST00000373656.4	zinc finger protein bioref (KIAA1572)
ENST00000373654.1	zinc finger protein bioref (KIAA1572)
ENST00000656036.1	Assembled from RACEseq reads
ENST00000373647.9	MANE_select
ENST00000402311.5	alternative 5' UTR
ENST00000392902.2	ribosomal protein S25 (RPS25) pseudogene
ENST00000616002.3	G protein-coupled receptor 21
ENST00000616002.3	MANE_select
ENST00000348403.10	MANE_select
ENST00000479114.2	alternative 5' UTR
ENST00000373631.8	MANE_select
ENST00000473039.5	novel transcript
ENST00000373624.6	novel protein (KIAA1608, FLJ21129)
ENST00000373620.7	novel protein (KIAA1608, FLJ21129)
ENST00000475421.1	putative novel transcript
ENST00000475421.1	this variant and one or more of variant fragments .6, .7, .8 and .11 could be part of one single variant
ENST00000491650.5	novel transcript
ENST00000491650.5	this variant and variant fragment .11 could be part of one single variant
ENST00000497135.5	novel transcript
ENST00000497135.5	novel transcript (KIAA1608, FLJ21129)
ENST00000497135.5	this variant and one or more of variant fragments .11 and .5 could be part of one single variant
ENST00000497135.5	this variant and one or more of variant fragments .5 and .11 could be part of one single variant
ENST00000373618.1	continued in Em:AC006450.1.2 in Em:AC006450; continues as bA558L8.1.2 in Em:AL161790
ENST00000373618.1	novel protein (KIAA1608, FLJ21129)
ENST00000479305.5	novel transcript
ENST00000479305.5	this variant and one or more of variant fragments .5 and .11 could be part of one single variant
ENST00000462245.1	novel transcript
ENST00000462245.1	this variant and one or more of variant fragments .5 and .11 could be part of one single variant
ENST00000474676.1	novel transcript
ENST00000475615.1	putative novel transcript
ENST00000475615.1	this variant and one or more of variant fragments .5 through .9 could be part of one single variant
ENST00000458025.1	putative novel transcript
ENST00000423942.1	putative novel transcript
ENST00000373615.9	MANE_select
ENST00000373603.5	NIMA (never in mitosis gene a)-related kinase 6
ENST00000373603.5	alternative 5' UTR
ENST00000373603.5	alternatively spliced 5' UTR shares CDS with bA121A14.1.1
ENST00000320246.10	MANE_select
ENST00000320246.10	NIMA (never in mitosis gene a)-related kinase 6
ENST00000373600.7	NIMA (never in mitosis gene a)-related kinase 6
ENST00000444973.5	NIMA (never in mitosis gene a)-related kinase 6
ENST00000454453.5	NIMA (never in mitosis gene a)-related kinase 6
ENST00000373596.5	NIMA (never in mitosis gene a)-related kinase 6
ENST00000425237.5	NIMA (never in mitosis gene a)-related kinase 6
ENST00000423785.5	NIMA (never in mitosis gene a)-related kinase 6
ENST00000422297.5	NIMA (never in mitosis gene a)-related kinase 6
ENST00000447379.1	NIMA (never in mitosis gene a)-related kinase 6
ENST00000426157.1	putative novel transcript
ENST00000437461.1	putative novel transcript
ENST00000259457.8	MANE_select
ENST00000498485.5	proteasome (prosome, macropain) subunit, beta type, 7
ENST00000474081.5	proteasome (prosome, macropain) subunit, beta type, 7
ENST00000478817.1	proteasome (prosome, macropain) subunit, beta type, 7
ENST00000466951.1	proteasome (prosome, macropain) subunit, beta type, 7
ENST00000373588.9	MANE_select
ENST00000373588.9	nuclear receptor subfamily 5, group A, member 1
ENST00000373587.3	nuclear receptor subfamily 5, group A, member 1
ENST00000455734.1	alternative 5' UTR
ENST00000455734.1	nuclear receptor subfamily 5, group A, member 1
ENST00000369027.4	putative novel transcript
ENST00000487099.7	MANE_select
ENST00000487099.7	nuclear receptor subfamily 6, group A, member 1
ENST00000438380.1	novel transcript
ENST00000373580.8	MANE_select
ENST00000331715.13	novel protein
ENST00000373574.2	MANE_select
ENST00000373574.2	novel protein
ENST00000493018.5	ribosomal protein L35
ENST00000348462.6	MANE_select
ENST00000353214.6	MANE_select
ENST00000353214.6	non canonical U12
ENST00000353214.6	non canonical polymorphism
ENST00000259477.6	hypothetical protein similar to actin related protein 2/3 complex, subunit 5
ENST00000259477.6	non canonical U12
ENST00000465124.1	hypothetical protein similar to actin related protein 2/3 complex, subunit 5
ENST00000373555.9	MANE_select
ENST00000373555.9	golgi autoantigen, golgin subfamily a, 1
ENST00000475407.5	golgi autoantigen, golgin subfamily a, 1
ENST00000485337.1	golgi autoantigen, golgin subfamily a, 1
ENST00000485337.1	non canonical TEC
ENST00000373551.4	golgi autoantigen, golgin subfamily a, 1
ENST00000336505.11	MANE_select
ENST00000487795.1	novel transcript
ENST00000373547.9	MANE_select
ENST00000373547.9	protein phosphatase 6, catalytic subunit
ENST00000456642.1	protein phosphatase 6, catalytic subunit
ENST00000430496.1	phosphoribosyl pyrophosphate synthetase 1 (PRPS1) pseudogene
ENST00000444599.2	laminin receptor 1 (LAMR1) pseudogene
ENST00000373538.8	MANE_select
ENST00000373538.8	Rab9 effector p40 (RAB9P40)
ENST00000373544.5	Rab9 effector p40 (RAB9P40)
ENST00000416065.1	Rab9 effector p40 (RAB9P40)
ENST00000324460.7	MANE_select
ENST00000324460.7	heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
ENST00000468244.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000461379.5	alternative 5' UTR
ENST00000297933.11	MANE_select
ENST00000495955.5	alternative 5' UTR
ENST00000436712.2	QC splicing correct
ENST00000469498.1	novel transcript
ENST00000453641.1	ribosomal protein S10 (RPS10) pseudogene
ENST00000655188.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000373511.6	NP_001006620.1
ENST00000265960.8	MANE_select
ENST00000265960.8	genebuild_only_MANE
ENST00000483937.5	mitogen-activated protein kinase associated protein 1
ENST00000444226.1	mitogen-activated protein kinase associated protein 1
ENST00000496658.5	mitogen-activated protein kinase associated protein 1
ENST00000437973.2	mitogen-activated protein kinase associated protein 1
ENST00000373496.3	alternative 5' UTR
ENST00000433483.1	mitogen-activated protein kinase associated protein 1
ENST00000433483.1	this variant and variant fragment .1.6 could be part of one single variant
ENST00000437097.1	putative novel transcript
ENST00000444886.1	heterogeneous nuclear ribonucleoprotein A1 (HNRP1) pseudogene
ENST00000373489.10	MANE_select
ENST00000491787.7	alternative 5' UTR
ENST00000491160.1	not organism-supported
ENST00000441473.1	putative novel transcript
ENST00000419853.1	novel transcript
ENST00000361171.8	MANE_select
ENST00000361171.8	novel protein (FLJ00022, FLJ00031)
ENST00000489637.3	NP_001011703.1
ENST00000402437.2	novel protein
ENST00000470567.5	novel transcript
ENST00000489570.1	novel transcript
ENST00000485886.1	novel transcript (FLJ00001)
ENST00000454034.1	novel transcript
ENST00000624132.1	confirm experimentally
ENST00000425153.1	putative novel transcript
ENST00000526117.6	LR annotation
ENST00000526117.6	NP_002307.2
ENST00000373474.9	MANE_select
ENST00000355497.10	LR annotation
ENST00000671261.1	Assembled from SLRseq reads (SRP049776)
ENST00000450858.1	alternative 5' UTR
ENST00000450858.1	alternative 5' UTR; shares CDS with bA489N22.2.1 and bA489N22.2.3
ENST00000450858.1	zinc finger protein 297B (ZNF297B)(ZNF-X, FLJ22470, KIAA0414)
ENST00000373464.5	MANE_select
ENST00000373464.5	alternative 5' UTR
ENST00000373464.5	alternative 5' UTR; shares CDS with bA489N22.2.2 and bA489N22.2.3
ENST00000373464.5	zinc finger protein 297B (ZNF297B)(ZNF-X, FLJ22470, KIAA0414)
ENST00000373457.1	alternative 5' UTR
ENST00000373457.1	alternative 5' UTR; shares CDS with bA489N22.2.1 and bA489N22.2.2
ENST00000373457.1	zinc finger protein 297B (ZNF297B)(ZNF-X, FLJ22470, KIAA0414)
ENST00000319119.4	novel protein (KIAA1993)(LOC203249)
ENST00000259351.10	MANE_select
ENST00000259351.10	Ral guanine nucleotide exchange factor RalGPS1A (RALGPS1A)(RALGEF2, KIAA0351)
ENST00000394022.7	Ral guanine nucleotide exchange factor RalGPS1A (RALGPS1A)(RALGEF2, KIAA0351)
ENST00000373439.6	Ral guanine nucleotide exchange factor RalGPS1A (RALGPS1A)(RALGEF2, KIAA0351)
ENST00000394011.7	Ral guanine nucleotide exchange factor RalGPS1A (RALGPS1A)(RALGEF2, KIAA0351)
ENST00000319107.8	Ral guanine nucleotide exchange factor RalGPS1A (RALGPS1A)(RALGEF2, KIAA0351)
ENST00000472427.5	Ral guanine nucleotide exchange factor RalGPS1A (RALGPS1A)(RALGEF2, KIAA0351)
ENST00000373436.5	Ral guanine nucleotide exchange factor RalGPS1A (RALGPS1A)(RALGEF2, KIAA0351)
ENST00000480993.1	QC splicing correct
ENST00000480993.1	Ral guanine nucleotide exchange factor RalGPS1A (RALGPS1A)(RALGEF2, KIAA0351)
ENST00000373434.5	Ral guanine nucleotide exchange factor RalGPS1A (RALGPS1A)(RALGEF2, KIAA0351)
ENST00000477700.1	Ral guanine nucleotide exchange factor RalGPS1A (RALGPS1A)(RALGEF2, KIAA0351)
ENST00000467325.2	QC splicing correct
ENST00000467325.2	Ral guanine nucleotide exchange factor RalGPS1A (RALGPS1A)(RALGEF2, KIAA0351)
ENST00000438723.1	Ral guanine nucleotide exchange factor RalGPS1A (RALGPS1A)(RALGEF2, KIAA0351)
ENST00000471643.1	Ral guanine nucleotide exchange factor RalGPS1A (RALGPS1A)(RALGEF2, KIAA0351)
ENST00000373425.8	MANE_select
ENST00000373425.8	angiopoietin-like 2 (angiopoietin-related protein 2)(ANGPTL2)(ARP2, HARP)
ENST00000373417.1	angiopoietin-like 2 (angiopoietin-related protein 2)(ANGPTL2)(ARP2, HARP)
ENST00000491991.1	angiopoietin-like 2 (angiopoietin-related protein 2)(ANGPTL2)(ARP2, HARP)
ENST00000470194.1	angiopoietin-like 2 (angiopoietin-related protein 2)(ANGPTL2)(ARP2, HARP)
ENST00000439286.5	novel protein
ENST00000429629.6	novel transcript
ENST00000446764.5	novel transcript
ENST00000425970.5	novel transcript
ENST00000373387.9	MANE_select
ENST00000464616.6	NMD likely if extended
ENST00000495172.1	novel transcript
ENST00000478696.5	novel transcript
ENST00000496711.5	novel transcript
ENST00000497703.1	novel transcript
ENST00000463005.1	novel transcript
ENST00000439400.1	density-regulated protein (DENR)(DRP, DRP1, SMAP-3) pseudogene
ENST00000451404.5	solute carrier family 2, (facilitated glucose transporter) member 8 (glucose transporter X1)(SLC2A8)(GLUT8, GLUTX1)
ENST00000373371.8	MANE_select
ENST00000373371.8	solute carrier family 2, (facilitated glucose transporter) member 8 (glucose transporter X1)(SLC2A8)(GLUT8, GLUTX1)
ENST00000419917.5	solute carrier family 2, (facilitated glucose transporter) member 8 (glucose transporter X1)(SLC2A8)(GLUT8, GLUTX1)
ENST00000373352.5	solute carrier family 2, (facilitated glucose transporter) member 8 (glucose transporter X1)(SLC2A8)(GLUT8, GLUTX1)
ENST00000373360.7	solute carrier family 2, (facilitated glucose transporter) member 8 (glucose transporter X1)(SLC2A8)(GLUT8, GLUTX1)
ENST00000419132.5	solute carrier family 2, (facilitated glucose transporter) member 8 (glucose transporter X1)(SLC2A8)(GLUT8, GLUTX1)
ENST00000439597.5	solute carrier family 2, (facilitated glucose transporter) member 8 (glucose transporter X1)(SLC2A8)(GLUT8, GLUTX1)
ENST00000423934.5	solute carrier family 2, (facilitated glucose transporter) member 8 (glucose transporter X1)(SLC2A8)(GLUT8, GLUTX1)
ENST00000430147.1	solute carrier family 2, (facilitated glucose transporter) member 8 (glucose transporter X1)(SLC2A8)(GLUT8, GLUTX1)
ENST00000484617.1	solute carrier family 2, (facilitated glucose transporter) member 8 (glucose transporter X1)(SLC2A8)(GLUT8, GLUTX1)
ENST00000489239.5	solute carrier family 2, (facilitated glucose transporter) member 8 (glucose transporter X1)(SLC2A8)(GLUT8, GLUTX1)
ENST00000477027.1	solute carrier family 2, (facilitated glucose transporter) member 8 (glucose transporter X1)(SLC2A8)(GLUT8, GLUTX1)
ENST00000485806.1	solute carrier family 2, (facilitated glucose transporter) member 8 (glucose transporter X1)(SLC2A8)(GLUT8, GLUTX1)
ENST00000484208.1	solute carrier family 2, (facilitated glucose transporter) member 8 (glucose transporter X1)(SLC2A8)(GLUT8, GLUTX1)
ENST00000342483.5	MANE_select
ENST00000342483.5	zinc finger protein 79 (pT7) (ZNF79)(pT7)
ENST00000497825.5	ribosomal protein L12 (60S ribosomal protein L12)(RPL12)
ENST00000361436.10	MANE_select
ENST00000361436.10	ribosomal protein L12 (60S ribosomal protein L12)(RPL12)
ENST00000497322.1	ribosomal protein L12 (60S ribosomal protein L12)(RPL12)
ENST00000483598.1	ribosomal protein L12 (60S ribosomal protein L12)(RPL12)
ENST00000674771.1	novel transcript
ENST00000373324.8	novel protein (LOC90678)
ENST00000675641.1	novel transcript
ENST00000498513.6	QC splicing correct
ENST00000498513.6	novel transcript
ENST00000300417.11	MANE_select
ENST00000300417.11	alternative 5' UTR
ENST00000323301.8	novel protein (LOC90678)
ENST00000675213.1	novel transcript
ENST00000373322.1	novel protein (LOC90678)
ENST00000675198.1	align_id:3764130|asmbl_254295
ENST00000675662.1	align_id:3764124|asmbl_254289
ENST00000676137.1	align_id:3764122|asmbl_254287
ENST00000676137.1	long_read_pipeline_2
ENST00000675012.1	align_id:3764125|asmbl_254290
ENST00000674511.1	align_id:3764131|asmbl_254296
ENST00000675521.1	align_id:3764128|asmbl_254293
ENST00000676035.1	align_id:3764119|asmbl_254284
ENST00000373314.7	novel protein (DKFZP434H0820)(FLJ13518, FLJ22151, FLJ22298)
ENST00000478917.1	novel transcript
ENST00000373312.4	MANE_select
ENST00000373312.4	novel protein
ENST00000468379.1	novel transcript
ENST00000484348.2	non canonical TEC
ENST00000484348.2	novel transcript
ENST00000465154.1	putative novel transcript
ENST00000476091.1	putative novel transcript
ENST00000637521.2	alternative 5' UTR
ENST00000636509.2	alternative 5' UTR
ENST00000626539.3	alternative 5' UTR
ENST00000637173.2	alternative 5' UTR
ENST00000630492.2	alternative 5' UTR
ENST00000373299.5	MANE_select
ENST00000650920.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000626333.1	CAGE supported TSS
ENST00000626333.1	alternative 5' UTR
ENST00000494254.3	alternative 3' UTR
ENST00000624141.1	CAGE supported TSS
ENST00000423807.5	novel transcript
ENST00000419060.5	novel transcript (LOC138428)
ENST00000543175.5	MANE_select
ENST00000456267.5	novel transcript
ENST00000414832.2	novel transcript
ENST00000416214.1	novel transcript
ENST00000373295.7	MANE_select
ENST00000373295.7	novel protein (LOC2862017)
ENST00000496009.5	novel transcript (LOC286207)
ENST00000464092.1	novel transcript
ENST00000461104.2	novel transcript
ENST00000373289.4	MANE_select
ENST00000373289.4	novel protein (FLJ32780)
ENST00000489226.5	novel transcript
ENST00000488285.1	novel transcript
ENST00000336067.10	torsin family 2, member A (TOR2A)(FLJ14771)
ENST00000373284.10	MANE_select
ENST00000373284.10	torsin family 2, member A (TOR2A)(FLJ14771)
ENST00000373281.8	torsin family 2, member A (TOR2A)(FLJ14771)
ENST00000463577.2	torsin family 2, member A (TOR2A)(FLJ14771)
ENST00000472723.1	torsin family 2, member A (TOR2A)(FLJ14771)
ENST00000463256.5	torsin family 2, member A (TOR2A)(FLJ14771)
ENST00000496460.5	torsin family 2, member A (TOR2A)(FLJ14771)
ENST00000494135.1	torsin family 2, member A (TOR2A)(FLJ14771)
ENST00000493439.1	torsin family 2, member A (TOR2A)(FLJ14771)
ENST00000373277.8	SH2 domain containing 3C (SH2D3C)(CHAT,NSP3)
ENST00000314830.13	MANE_select
ENST00000314830.13	SH2 domain containing 3C (SH2D3C)(CHAT,NSP3)
ENST00000420366.5	SH2 domain containing 3C (SH2D3C)(CHAT,NSP3)
ENST00000468969.6	SH2 domain containing 3C (SH2D3C)(CHAT,NSP3)
ENST00000484160.1	SH2 domain containing 3C (SH2D3C)(CHAT,NSP3)
ENST00000440630.5	SH2 domain containing 3C (SH2D3C)(CHAT,NSP3)
ENST00000464239.5	SH2 domain containing 3C (SH2D3C)(CHAT,NSP3)
ENST00000488685.1	SH2 domain containing 3C (SH2D3C)(CHAT,NSP3)
ENST00000414380.1	SH2 domain containing 3C (SH2D3C)(CHAT,NSP3)
ENST00000652130.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000421939.5	Extends 5' end of gene to start at Met upstream of published Met; annotated as variant as evidence overwhelmingly supports downstream transcriptional start
ENST00000421939.5	cyclin-dependent kinase 9 (CDC2-related kinase) (CDK9)(TAK, C-2k, CDC2L4, PITALRE)
ENST00000373264.5	MANE_select
ENST00000373264.5	cyclin-dependent kinase 9 (CDC2-related kinase) (CDK9)(TAK, C-2k, CDC2L4, PITALRE)
ENST00000480353.5	cyclin-dependent kinase 9 (CDC2-related kinase) (CDK9)(TAK, C-2k, CDC2L4, PITALRE)
ENST00000491521.1	cyclin-dependent kinase 9 (CDC2-related kinase) (CDK9)(TAK, C-2k, CDC2L4, PITALRE)
ENST00000498339.1	cyclin-dependent kinase 9 (CDC2-related kinase) (CDK9)(TAK, C-2k, CDC2L4, PITALRE)
ENST00000479147.6	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000479375.6	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000373247.7	MANE_select
ENST00000373247.7	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000488307.5	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000373228.5	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000481552.6	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000460181.5	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000475765.5	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000496586.5	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000373225.7	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000431857.5	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000423577.1	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000469310.1	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000497386.5	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000488506.5	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000489522.5	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000467826.5	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000473536.1	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000475270.1	folylpolyglutamate synthase (folylpolyglutamate synthetase)(FPGS)
ENST00000373203.9	MANE_select
ENST00000373203.9	endoglin (Osler-Rendu-Weber syndrome 1) (ENG)(END, ORW, HHT1, ORW1, CD105)
ENST00000344849.4	endoglin (Osler-Rendu-Weber syndrome 1) (ENG)(END, ORW, HHT1, ORW1, CD105)
ENST00000486329.1	endoglin (Osler-Rendu-Weber syndrome 1) (ENG)(END, ORW, HHT1, ORW1, CD105)
ENST00000462196.1	endoglin (Osler-Rendu-Weber syndrome 1) (ENG)(END, ORW, HHT1, ORW1, CD105)
ENST00000439298.5	novel transcript
ENST00000425991.1	novel transcript
ENST00000644144.2	CAGE supported TSS
ENST00000644144.2	LR annotation
ENST00000644144.2	MANE_select
ENST00000413016.5	NMD likely if extended
ENST00000413016.5	adenylate kinase 1 (AK1)
ENST00000373156.5	adenylate kinase 1 (AK1)
ENST00000373156.5	alternative 5' UTR
ENST00000373156.5	alternatively spliced 5' UTR; shares CDS with bA203J24.2.1
ENST00000223836.10	adenylate kinase 1 (AK1)
ENST00000373146.5	CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNAC6)(ST6GALNACVI)
ENST00000622357.5	CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNAC6)(ST6GALNACVI)
ENST00000373141.5	CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNAC6)(ST6GALNACVI)
ENST00000373142.5	CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNAC6)(ST6GALNACVI)
ENST00000373144.7	CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNAC6)(ST6GALNACVI)
ENST00000291839.10	CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNAC6)(ST6GALNACVI)
ENST00000463086.5	CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNAC6)(ST6GALNACVI)
ENST00000480417.5	CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNAC6)(ST6GALNACVI)
ENST00000494541.5	CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNAC6)(ST6GALNACVI)
ENST00000481355.5	CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNAC6)(ST6GALNACVI)
ENST00000478319.5	CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNAC6)(ST6GALNACVI)
ENST00000494611.1	CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNAC6)(ST6GALNACVI)
ENST00000335791.10	MANE_select
ENST00000335791.10	sialyltransferase 7D ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) (SIAT7D)(SIAT3C, ST6GALNAC4, ST6GALNACIV)
ENST00000495983.1	sialyltransferase 7D ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) (SIAT7D)(SIAT3C, ST6GALNAC4, ST6GALNACIV)
ENST00000474282.2	QC splicing correct
ENST00000474282.2	sialyltransferase 7D ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) (SIAT7D)(SIAT3C, ST6GALNAC4, ST6GALNACIV)
ENST00000467674.5	sialyltransferase 7D ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) (SIAT7D)(SIAT3C, ST6GALNAC4, ST6GALNACIV)
ENST00000361444.3	sialyltransferase 7D ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) (SIAT7D)(SIAT3C, ST6GALNAC4, ST6GALNACIV)
ENST00000483438.1	sialyltransferase 7D ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) (SIAT7D)(SIAT3C, ST6GALNAC4, ST6GALNACIV)
ENST00000479747.1	sialyltransferase 7D ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) (SIAT7D)(SIAT3C, ST6GALNAC4, ST6GALNACIV)
ENST00000477191.5	novel transcript
ENST00000485562.1	novel transcript
ENST00000388747.9	MANE_select
ENST00000464759.5	novel transcript
ENST00000495448.5	novel transcript
ENST00000464108.5	novel transcript
ENST00000498783.5	novel transcript
ENST00000490773.5	novel transcript
ENST00000497234.5	novel transcript
ENST00000476624.1	novel transcript
ENST00000492296.1	novel transcript
ENST00000590283.5	non canonical TEC
ENST00000608805.1	454 RNA-Seq supported
ENST00000415141.2	putative novel transcript
ENST00000314392.13	MANE_select
ENST00000314392.13	dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit (DPM2)(MGC21559)
ENST00000470181.1	dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit (DPM2)(MGC21559)
ENST00000473360.1	dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit (DPM2)(MGC21559)
ENST00000373110.4	dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit (DPM2)(MGC21559)
ENST00000373095.6	MANE_select
ENST00000373084.8	NP_976050.1
ENST00000479828.1	novel transcript
ENST00000493175.1	novel transcript
ENST00000494606.1	novel transcript
ENST00000414976.1	putative novel transcript
ENST00000470245.1	novel transcript
ENST00000373078.5	MANE_select
ENST00000373078.5	novel protein (LOC203245)
ENST00000488519.1	novel transcript
ENST00000466139.1	novel transcript
ENST00000453870.1	putative novel transcript
ENST00000418747.2	novel transcript
ENST00000338961.11	MANE_select
ENST00000677691.1	align_id:3764406|asmbl_254571
ENST00000493205.6	align_id:3764415|asmbl_254580
ENST00000476655.6	align_id:3764416|asmbl_254581
ENST00000677651.1	align_id:3764412|asmbl_254577
ENST00000677980.1	align_id:3764408|asmbl_254573
ENST00000679345.1	long_read_pipeline_2
ENST00000678174.1	align_id:3764418|asmbl_254583
ENST00000678916.1	align_id:3764410|asmbl_254575
ENST00000497109.6	align_id:3764424|asmbl_254589
ENST00000483625.6	align_id:3764411|asmbl_254576
ENST00000485237.1	prostaglandin E synthase 2 (PTGES2)(GBF1, GBF-1, C9orf15, FLJ14038)
ENST00000373017.5	lipocalin 2 (oncogene 24p3) (LCN2)(NGAL)
ENST00000470902.5	lipocalin 2 (oncogene 24p3) (LCN2)(NGAL)
ENST00000277480.7	MANE_select
ENST00000277480.7	lipocalin 2 (oncogene 24p3) (LCN2)(NGAL)
ENST00000372998.1	lipocalin 2 (oncogene 24p3) (LCN2)(NGAL)
ENST00000494317.1	lipocalin 2 (oncogene 24p3) (LCN2)(NGAL)
ENST00000372994.2	MANE_select
ENST00000372994.2	chromosome 9 open reading frame 16 (C9orf16)(MGC4639, EST00098, FLJ12823)
ENST00000492588.1	chromosome 9 open reading frame 16 (C9orf16)(MGC4639, EST00098, FLJ12823)
ENST00000489240.1	chromosome 9 open reading frame 16 (C9orf16)(MGC4639, EST00098, FLJ12823)
ENST00000486420.1	chromosome 9 open reading frame 16 (C9orf16)(MGC4639, EST00098, FLJ12823)
ENST00000651955.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000372938.10	MANE_select
ENST00000476727.6	non canonical TEC
ENST00000488559.6	non canonical TEC
ENST00000467178.5	novel transcript
ENST00000324544.6	alternative 5' UTR
ENST00000420484.2	alternative 5' UTR
ENST00000475805.5	NAGNAG splice site
ENST00000475805.5	alternative 3' UTR
ENST00000372923.8	MANE_select
ENST00000627543.2	alternative 3' UTR
ENST00000634267.2	confirm experimentally
ENST00000634267.2	non canonical TEC
ENST00000637094.1	fetal_bam
ENST00000625457.1	alternative 3' UTR
ENST00000421699.7	upstream ATG
ENST00000450617.6	upstream ATG
ENST00000490628.2	upstream ATG
ENST00000372898.6	novel protein
ENST00000608796.6	novel protein
ENST00000652598.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000418976.2	novel protein
ENST00000372890.6	MANE_select
ENST00000372890.6	novel protein (CLONE24922)
ENST00000460320.1	novel protein (CLONE24922)
ENST00000461180.1	novel protein (CLONE24922)
ENST00000300452.8	MANE_select
ENST00000300452.8	coenzyme Q4 homolog (yeast)
ENST00000372875.3	CAGE supported TSS
ENST00000372875.3	coenzyme Q4 homolog (yeast)
ENST00000461102.1	coenzyme Q4 homolog (yeast)
ENST00000300456.5	MANE_select
ENST00000300456.5	solute carrier family 27 (fatty acid transporter), member 4 (FATP4)
ENST00000372870.5	solute carrier family 27 (fatty acid transporter), member 4 (FATP4)
ENST00000470840.5	novel protein (2GC2668)
ENST00000372850.5	novel protein (2GC2668)
ENST00000372847.1	novel protein (2GC2668)
ENST00000372853.9	CAGE supported TSS
ENST00000372853.9	MANE_select
ENST00000608502.2	CAGE supported TSS
ENST00000420034.5	alternative 5' UTR
ENST00000372842.5	cerebral cell adhesion molecule (CerCAM)
ENST00000447915.5	alternative 5' UTR
ENST00000420512.5	alternative 5' UTR
ENST00000493788.5	novel transcript
ENST00000411852.5	alternative 5' UTR
ENST00000372838.9	MANE_select
ENST00000372838.9	cerebral cell adhesion molecule (CerCAM)
ENST00000487001.6	NMD likely if extended
ENST00000472858.1	QC splicing correct
ENST00000449048.2	pseudogene similar to part of a novel gene (FLJ36874)
ENST00000497812.6	outer dense fiber of sperm tails 2 (ODF84, ODF2/1, ODF2/2, MGC9034)
ENST00000604420.5	CAGE supported TSS
ENST00000448249.7	CAGE supported TSS
ENST00000393527.7	outer dense fiber of sperm tails 2 (ODF84, ODF2/1, ODF2/2, MGC9034)
ENST00000446274.5	alternative 5' UTR
ENST00000432065.6	outer dense fiber of sperm tails 2 (ODF84, ODF2/1, ODF2/2, MGC9034)
ENST00000470061.5	alternative 5' UTR
ENST00000420801.1	putative novel transcript
ENST00000309971.9	GLE1 RNA export mediator-like (yeast)
ENST00000309971.9	MANE_select
ENST00000372770.4	GLE1 RNA export mediator-like (yeast)
ENST00000494417.1	GLE1 RNA export mediator-like (yeast)
ENST00000434999.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000434999.2	novel transcript
ENST00000660288.1	Assembled from SLRseq reads (SRP049776)
ENST00000426704.1	novel transcript
ENST00000372731.8	spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ((ALPHA)II-SPECTRIN)
ENST00000372739.7	MANE_select
ENST00000372739.7	spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ((ALPHA)II-SPECTRIN)
ENST00000497216.2	spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ((ALPHA)II-SPEC4RIN)
ENST00000472211.2	spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ((ALPHA)II-SPECTRIN)
ENST00000475367.1	spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ((ALPHA)II-SPECTRIN)
ENST00000461855.3	spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ((ALPHA)II-SPECTRIN)
ENST00000476825.2	spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ((ALPHA)II-SPECTRIN)
ENST00000491712.2	spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ((ALPHA)II-SPECTRIN)
ENST00000483181.1	novel transcript
ENST00000473486.1	novel transcript
ENST00000427516.2	pseudogene similar to part of vesicle transport through interaction with t-SNAREs homolog 1B (yeast) (VTI1B)
ENST00000428643.1	putative novel transcript
ENST00000652876.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000454747.1	alternative 5' UTR
ENST00000372692.8	SET translocation (myeloid leukemia-associated) (2PP2A, I2PP2A, PHAPII, TAF-IBETA)
ENST00000409104.7	SET translocation (myeloid leukemia-associated) (2PP2A, I2PP2A, PHAPII, TAF-IBETA)
ENST00000322030.13	MANE_select
ENST00000322030.13	SET translocation (myeloid leukemia-associated) (2PP2A, I2PP2A, PHAPII, TAF-IBETA)
ENST00000466009.5	SET translocation (myeloid leukemia-associated) (2PP2A, I2PP2A, PHAPII, TAF-IBETA)
ENST00000480217.5	SET translocation (myeloid leukemia-associated) (2PP2A, I2PP2A, PHAPII, TAF-IBETA)
ENST00000291906.5	MANE_select
ENST00000291906.5	protein kinase PKNbeta (pknbeta), variant 1
ENST00000483521.1	QC splicing correct
ENST00000483521.1	novel transcript, variant 2
ENST00000485301.1	novel transcript, variant 3
ENST00000372667.9	zinc finger, DHHC domain containing 12 (ZNF400, FLJ14524), variant 6
ENST00000372663.9	MANE_select
ENST00000372663.9	zinc finger, DHHC domain containing 12 (ZNF400, FLJ14524), variant 1
ENST00000467312.1	zinc finger, DHHC domain containing 12 (ZNF400, FLJ14524), variant 3
ENST00000452105.5	zinc finger, DHHC domain containing 12 (ZNF400, FLJ14524), variant 5
ENST00000406904.2	zinc finger, DHHC domain containing 12 (ZNF400, FLJ14524), variant 4
ENST00000443631.1	putative novel transcript
ENST00000291900.7	MANE_select
ENST00000291900.7	ZYG homolog, variant 1
ENST00000494461.1	novel transcript, variant 4
ENST00000414921.5	Alternatively spliced 5' UTR, shares CDS with bA545E17.4.1 (partial)
ENST00000414921.5	ZYG homolog, variant 3
ENST00000414921.5	alternative 5' UTR
ENST00000427848.1	Alternatively spliced 5' UTR, shares CDS with bA545E17.4.1 (partial)
ENST00000427848.1	ZYG homolog, variant 2
ENST00000427848.1	alternative 5' UTR
ENST00000372648.10	MANE_select
ENST00000372648.10	novel protein (FLJ10743), variant 2
ENST00000475097.5	novel transcript, variant 4
ENST00000466056.1	novel transcript, variant 3
ENST00000223865.8	novel protein (FLJ10743), variant 1
ENST00000372642.5	MANE_select
ENST00000372642.5	endonuclease G
ENST00000361256.10	MANE_select
ENST00000361256.10	novel protein (HSPC109), variant 1
ENST00000467582.1	novel transcript, variant 3
ENST00000480366.1	novel transcript, variant 4
ENST00000466556.5	novel transcript, variant 1
ENST00000467396.1	novel transcript, variant 5
ENST00000302586.8	MANE_select
ENST00000466418.1	cysteine conjugate-beta lyase; cytoplasmic (glutamine  transaminase K, kyneurenine aminotransferase), variant 8
ENST00000372600.9	MANE_select
ENST00000372599.7	Variant 2; alternatively spliced in 5' UTR
ENST00000372592.8	MANE_select
ENST00000426694.5	alternative 5' UTR
ENST00000372586.4	MANE_select
ENST00000372577.2	MANE_select
ENST00000372564.8	MANE_select
ENST00000494608.1	novel transcript, variant 6
ENST00000670830.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000372546.9	MANE_select
ENST00000412363.1	not organism-supported
ENST00000318080.7	MANE_select
ENST00000467343.1	not organism-supported
ENST00000415948.6	OV260 chr9.128.008.a-intron1
ENST00000415948.6	QC splicing correct
ENST00000441796.1	QC splicing correct
ENST00000455830.2	not organism-supported
ENST00000434250.1	Possible CRAT antisense transcript
ENST00000393370.7	MANE_select
ENST00000372491.4	MANE_select
ENST00000664782.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000427109.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654735.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654190.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657886.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000436710.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661745.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660635.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657651.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665063.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665063.1	Assembled from SLRseq reads (SRP049776)
ENST00000667257.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000444125.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654148.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666671.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660036.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657393.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659864.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423122.2	Assembled from SLRseq reads (SRP049776)
ENST00000436510.1	not organism-supported
ENST00000663459.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655097.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653047.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000454968.5	continued from bA65J3.4.1 in Em:AL353803
ENST00000454968.5	continues as bA492E3.1.1 in Em:AL391056
ENST00000454968.5	novel transcript (FLJ35367, FLJ14115), variant 1
ENST00000652803.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000444184.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000444184.6	continued from bA65J3.4.2 in Em:AL353803
ENST00000444184.6	continues as bA492E3.1.2 in Em:AL391056
ENST00000444184.6	novel transcript (FLJ35367, FLJ14115), variant 2
ENST00000658785.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656664.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666282.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663727.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663000.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666041.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657306.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668074.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656234.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656234.1	Assembled from SLRseq reads (SRP049776)
ENST00000662331.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662331.1	Assembled from SLRseq reads (SRP049776)
ENST00000654822.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654822.1	Assembled from SLRseq reads (SRP049776)
ENST00000659188.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658175.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654204.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659535.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653700.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667047.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664811.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665998.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671609.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662047.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665880.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000608369.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671555.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655787.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661101.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654131.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666559.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668919.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653386.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655962.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659690.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657389.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669088.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668206.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658999.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654286.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000624138.4	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000625171.4	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669210.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669210.1	novel transcript (FLJ35367, FLJ14115), variant 5
ENST00000412141.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000622680.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000622120.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000453213.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608272.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000623185.4	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669939.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669939.1	putative novel transcript (FLJ35367, FLJ14115), variant 4
ENST00000653436.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667499.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660643.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663083.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671598.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652329.1	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000658659.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665659.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667707.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661811.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658787.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650882.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000443993.1	novel transcript (FLJ20378)
ENST00000664662.1	Assembled from SLRseq reads (SRP049776)
ENST00000372486.5	alternative 5' UTR
ENST00000372483.9	AD-003 protein (AD-003), variant 1
ENST00000372483.9	MANE_select
ENST00000481189.1	novel transcript, variant 7
ENST00000459968.6	novel transcript, variant 5
ENST00000482347.1	novel transcript, variant 3
ENST00000372481.7	AD-003 protein (AD-003), variant 6
ENST00000372480.1	AD-003 protein (AD-003), variant 4
ENST00000372480.1	alternative 5' UTR
ENST00000486391.2	novel transcript, variant 8
ENST00000372478.4	continued from bA483H20.2 in Em:AL590369
ENST00000372478.4	continues as bA492E3.4 in Em:AL391056
ENST00000372478.4	novel protein (FLJ35803)
ENST00000651030.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000277458.5	MANE_select
ENST00000277458.5	ankyrin repeat and SOCS box-containing 6 (FLJ20548), variant 1
ENST00000277459.8	ankyrin repeat and SOCS box-containing 6 (FLJ20548), variant 2
ENST00000455074.1	putative novel transcript
ENST00000372469.6	MANE_select
ENST00000340607.5	MANE_select
ENST00000425374.1	ubiquitin activating enzyme 2 pseudogene
ENST00000486372.1	this variant and variant fragment .1.4 could be part of one single variant
ENST00000486372.1	torsin family 1, member B (torsin B) (DQ1)
ENST00000259339.7	MANE_select
ENST00000259339.7	torsin family 1, member B (torsin B) (DQ1)
ENST00000427860.1	torsin family 1, member B (torsin B) (DQ1)
ENST00000488169.1	this variant and variant fragment .1.2 could be part of one single variant
ENST00000488169.1	torsin family 1, member B (torsin B) (DQ1)
ENST00000351698.5	MANE_select
ENST00000351698.5	dystonia 1, torsion (autosomal dominant; torsin A) (DQ2, TOR1A)
ENST00000651202.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000474192.1	dystonia 1, torsion (autosomal dominant; torsin A) (DQ2, TOR1A)
ENST00000474192.1	this variant and variant fragment .2.2 could be part of one single variant
ENST00000473604.2	dystonia 1, torsion (autosomal dominant; torsin A) (DQ2, TOR1A)
ENST00000473084.1	dystonia 1, torsion (autosomal dominant; torsin A) (DQ2, TOR1A)
ENST00000473084.1	this variant and variant fragment .2.4 could be part of one single variant
ENST00000372447.7	MANE_select
ENST00000372447.7	hepatocellular carcinoma-associated antigen 59 (LOC51759) (HSPC220)
ENST00000461349.5	novel transcript
ENST00000461762.5	novel transcript
ENST00000480023.1	novel transcript
ENST00000480023.1	this variant and variant fragment .3.4 could be part of one single variant
ENST00000461539.5	novel transcript
ENST00000492991.5	novel transcript
ENST00000495934.2	novel transcript
ENST00000495934.2	this variant and variant fragment .3.2 could be part of one single variant
ENST00000491053.5	this variant and one or more of variant fragments .4.6 and .4.7 could be part of one single variant
ENST00000491053.5	ubiquitin specific protease 20 (VDU2, KIAA1003)
ENST00000494971.2	non canonical TEC
ENST00000372429.8	MANE_select
ENST00000372429.8	ubiquitin specific protease 20 (VDU2, KIAA1003)
ENST00000315480.9	alternative 3' UTR
ENST00000315480.9	alternatively spliced 3' UTR, share CDS with bA409K20.4.1
ENST00000315480.9	ubiquitin specific protease 20 (VDU2, KIAA1003)
ENST00000358355.5	alternative 5' UTR
ENST00000358355.5	alternatively spliced 5' UTR, shares CDS with bA409K20.4.1
ENST00000358355.5	ubiquitin specific protease 20 (VDU2, KIAA1003)
ENST00000474895.6	non canonical TEC
ENST00000474895.6	this variant and one or more of variant fragments .4.4 and .4.7 could be part of one single variant
ENST00000474895.6	ubiquitin specific protease 20 (VDU2, KIAA1003)
ENST00000491731.1	ubiquitin specific protease 20 (VDU2, KIAA1003)
ENST00000496927.5	9ubiquitin specific protease 20 (VDU2, KIAA1003)
ENST00000472108.1	this variant and one or more of variant fragments .4.4 and .4.6 could be part of one single variant
ENST00000472108.1	ubiquitin specific protease 20 (VDU2, KIAA1003)
ENST00000417984.1	60S ribosomal protein L34 (RPL34) pseudogene
ENST00000446176.7	MANE_select
ENST00000446176.7	formin binding protein 1 (FBP17, KIAA0554)
ENST00000449089.6	formin binding protein 1 (FBP17, KIAA0554)
ENST00000355681.3	formin binding protein 1 (FBP17, KIAA0554)
ENST00000478129.5	formin binding protein 1 (FBP17, KIAA0554)
ENST00000462766.2	QC splicing correct
ENST00000462766.2	formin binding protein 1 (FBP17, KIAA0554)
ENST00000462766.2	non canonical TEC
ENST00000482107.1	formin binding protein 1 (FBP17, KIAA0554)
ENST00000491905.1	formin binding protein 1 (FBP17, KIAA0554)
ENST00000414926.1	putative novel transcript
ENST00000372406.5	G protein-coupled receptor 107 (LUSTR1, FLJ20998, FLJ22591, KIAA1624, MGC15440, RP11-88G17)
ENST00000347136.11	G protein-coupled receptor 107 (LUSTR1, FLJ20998, FLJ22591, KIAA1624, MGC15440, RP11-88G17)
ENST00000347136.11	MANE_select
ENST00000493417.5	G protein-coupled receptor 107 (LUSTR1, FLJ20998, FLJ22591, KIAA1624, MGC15440, RP11-88G17)
ENST00000462907.1	G protein-coupled receptor 107 (LUSTR1, FLJ20998, FLJ22591, KIAA1624, MGC15440, RP11-88G17)
ENST00000483935.1	G protein-coupled receptor 107 (LUSTR1, FLJ20998, FLJ22591, KIAA1624, MGC15440, RP11-88G17)
ENST00000372398.6	MANE_select
ENST00000493042.1	frequenin homolog (Drosophila) (FLUP, NCS1, NCS-1, DKFZp761L1223) (neuronal calcium sensor 1)
ENST00000415566.2	Gene fragments RP11-88G17.4-001, RP11-618A20.3-001, RP11-618A20.4-001 and RP11-618A20.1-003 are part of the same gene; the exact exon structure linking the fragments is yet to be determined
ENST00000420499.2	Gene fragments RP11-88G17.4-001, RP11-618A20.3-001, RP11-618A20.4-001 and RP11-618A20.1-003 are part of the same gene; the exact exon structure linking the fragments is yet to be determined
ENST00000462148.1	Gene fragments RP11-88G17.4-001, RP11-618A20.3-001, RP11-618A20.4-001 and RP11-618A20.1-003 are part of the same gene; the exact exon structure linking the fragments is yet to be determined
ENST00000487727.2	indel causes a frameshift in exon 9
ENST00000487727.2	novel transcript (DKFZp434P0216)
ENST00000480829.1	novel transcript (DKFZp434P0216)
ENST00000428715.1	Gene fragments RP11-88G17.4-001, RP11-618A20.3-001,RP11-618A20.4-001  and RP11-618A20.1-003 are part of the same gene; the exact exon structure linking the fragments is yet to be determined
ENST00000352480.10	MANE_select
ENST00000352480.10	argininosuccinate synthetase (ASS1,CTLN1)
ENST00000372394.5	alternative 5' UTR
ENST00000372394.5	alternatively spliced 5' UTR, shares CDS with bA618A20.2.1
ENST00000372394.5	argininosuccinate synthetase (ASS1,CTLN1)
ENST00000372393.7	alternative 5' UTR
ENST00000372393.7	alternatively spliced 5' UTR, shares CDS with bA618A20.2.1
ENST00000372393.7	argininosuccinate synthetase (ASS1,CTLN1)
ENST00000422569.5	argininosuccinate synthetase (ASS1,CTLN1)
ENST00000422569.5	this variant and one or more of variant fragments .2.6 and .2.7 could be part of one single variant
ENST00000443588.1	argininosuccinate synthetase (ASS1,CTLN1)
ENST00000467695.5	argininosuccinate synthetase (ASS1,CTLN1)
ENST00000493984.6	argininosuccinate synthetase (ASS1,CTLN1)
ENST00000493984.6	non canonical TEC
ENST00000492400.5	argininosuccinate synthetase (ASS1,CTLN1)
ENST00000492400.5	this variant and variant fragment .2.4 could be part of one single variant
ENST00000470849.4	argininosuccinate synthetase (ASS1,CTLN1)
ENST00000470849.4	this variant and variant fragment .2.4 could be part of one single variant
ENST00000372386.6	argininosuccinate synthetase (ASS1,CTLN1)
ENST00000467100.1	far upstream element (FUSE) binding protein 3 (FBP3)
ENST00000319725.10	MANE_select
ENST00000319725.10	far upstream element (FUSE) binding protein 3 (FBP3)
ENST00000650723.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000465949.1	far upstream element (FUSE) binding protein 3 (FBP3)
ENST00000487406.2	far upstream element (FUSE) binding protein 3 (FBP3)
ENST00000472006.1	far upstream element (FUSE) binding protein 3 (FBP3)
ENST00000492199.1	far upstream element (FUSE) binding protein 3 (FBP3)
ENST00000423330.1	RPL19 (ribosomal protein L19) pseudogene
ENST00000253008.3	MANE_select
ENST00000253008.3	PR domain containing 12 (PR-domain containing 12)
ENST00000491115.6	homolog of yeast RRP4 (ribosomal RNA processing 4), 3'-5' exoribonuclease (RRP4)
ENST00000430138.6	homolog of yeast RRP4 (ribosomal RNA processing 4), 3'-5' exoribonuclease (RRP4) (FLJ33193)
ENST00000490641.5	homolog of yeast RRP4 (ribosomal RNA processing 4), 3'-5' exoribonuclease (RRP4)
ENST00000372352.7	homolog of yeast RRP4 (ribosomal RNA processing 4), 3'-5' exoribonuclease (RRP4)
ENST00000372358.10	MANE_select
ENST00000372358.10	homolog of yeast RRP4 (ribosomal RNA processing 4), 3'-5' exoribonuclease (RRP4)
ENST00000372351.7	homolog of yeast RRP4 (ribosomal RNA processing 4), 3'-5' exoribonuclease (RRP4)
ENST00000372350.7	homolog of yeast RRP4 (ribosomal RNA processing 4), 3'-5' exoribonuclease (RRP4)
ENST00000463488.1	homolog of yeast RRP4 (ribosomal RNA processing 4), 3'-5' exoribonuclease (RRP4)
ENST00000495699.2	homolog of yeast RRP4 (ribosomal RNA processing 4), 3'-5' exoribonuclease (RRP4)
ENST00000467138.1	homolog of yeast RRP4 (ribosomal RNA processing 4), 3'-5' exoribonuclease (RRP4) (FLJ35408)
ENST00000372348.7	CAGE supported TSS
ENST00000372348.7	v-abl Abelson murine leukemia viral oncogene homolog 1 (ABL, JTK7)
ENST00000393293.4	exon ends with non-canonical splicing
ENST00000393293.4	v-abl Abelson murine leukemia viral oncogene homolog 1 (ABL, JTK7)
ENST00000318560.6	CCDS35166
ENST00000318560.6	MANE_select
ENST00000318560.6	v-abl Abelson murine leukemia viral oncogene homolog 1 (ABL, JTK7)
ENST00000417156.1	ribosomal protein L37 (RPL37) pseudogene
ENST00000623824.2	MANE_select
ENST00000623824.2	upstream uORF
ENST00000444139.5	novel protein (FLJ14810) similar to fibrinogen proteins
ENST00000372338.9	MANE_select
ENST00000372338.9	novel protein similar to fibrinogen proteins
ENST00000372337.6	novel protein similar to fibrinogen proteins
ENST00000451466.1	alternative 5' UTR
ENST00000451466.1	alternatively spliced in 5' UTR, shares partial CDS with bA83J21.2.1
ENST00000451466.1	novel protein similar to fibrinogen proteins
ENST00000486250.5	novel transcript
ENST00000463475.1	novel transcript
ENST00000421067.1	putative novel transcript
ENST00000361069.9	MANE_select
ENST00000361069.9	laminin, gamma 3
ENST00000678544.1	align_id:3765261|asmbl_255426
ENST00000678758.1	align_id:3765262|asmbl_255427
ENST00000355452.5	laminin, gamma 3
ENST00000355452.5	laminin, gamma 3 (DKFZp434E202)
ENST00000462567.1	laminin, gamma 3
ENST00000372314.3	FLJ25060
ENST00000247291.8	FLJ12783, DKFZp761J191, DKFZp761N011
ENST00000247291.8	MANE_select
ENST00000372302.5	FLJ34593
ENST00000372302.5	non canonical TEC
ENST00000359428.10	CAGE supported TSS
ENST00000359428.10	LR annotation
ENST00000359428.10	MANE_select
ENST00000530843.1	NMD candidate
ENST00000489260.1	nucleoporin 214kDa
ENST00000470765.5	nucleoporin 214kDa
ENST00000483497.6	nucleoporin 214kDa
ENST00000465486.6	NMD likely if extended
ENST00000498010.2	nucleoporin 214kDa
ENST00000476004.5	nucleoporin 214kDa
ENST00000528406.1	alternative 3' UTR
ENST00000496921.2	nucleoporin 214kDa (FLJ36454)
ENST00000415391.6	novel transcript
ENST00000589128.1	novel transcript
ENST00000446606.1	ribosomal protein L13a (RPL13A) pseudogene
ENST00000247295.4	novel transcript (FLJ00024)
ENST00000372269.7	novel protein
ENST00000372271.4	MANE_select
ENST00000372271.4	novel protein (FLJ38104)
ENST00000464831.1	novel protein
ENST00000663086.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000372264.4	MANE_select
ENST00000372264.4	novel protein (MGC12921) (FLJ14662)
ENST00000372261.1	novel protein
ENST00000372228.9	CCDS6943.1
ENST00000372228.9	protein-O-mannosyltransferase 1 (RT)
ENST00000677216.1	CCDS48045.1
ENST00000677216.1	protein-O-mannosyltransferase 1 (RT)
ENST00000676640.1	alternative 5' UTR
ENST00000676640.1	protein-O-mannosyltransferase 1 (RT)
ENST00000341012.12	CCDS43895.1
ENST00000341012.12	protein-O-mannosyltransferase 1 (RT) (FLJ90407)
ENST00000441334.5	protein-O-mannosyltransferase 1 (RT)
ENST00000402686.8	CCDS43894.1
ENST00000402686.8	MANE_select
ENST00000402686.8	protein-O-mannosyltransferase 1 (RT) (FLJ90393)
ENST00000677853.1	SLR-seq_TB0000032
ENST00000678548.1	SLR-seq_TB0000035
ENST00000676803.1	SLR-seq_TB0000032
ENST00000676803.1	alternative 5' UTR
ENST00000679111.1	SLR-seq_HsBN_lib7
ENST00000679023.1	SLR-seq_HsBN_lib7
ENST00000677626.1	SLR-seq_HsBN_lib7
ENST00000372220.5	SLR-seq_TB0000033
ENST00000678546.1	PacBio_RACEseq_UKGTN_Brain
ENST00000676835.1	SLR-seq_TB0000035
ENST00000418774.6	Snaptron_GTEX
ENST00000678264.1	protein-O-mannosyltransferase 1 (RT)
ENST00000415075.6	protein-O-mannosyltransferase 1 (RT)
ENST00000448212.5	protein-O-mannosyltransferase 1 (RT)
ENST00000483472.2	protein-O-mannosyltransferase 1 (RT)
ENST00000678366.1	SLR-seq_TB0000034
ENST00000677099.1	SLR-seq_TB0000034
ENST00000679221.1	alternative 5' UTR
ENST00000678785.1	alternative 5' UTR
ENST00000677295.1	Nanopore_NA12878
ENST00000677295.1	SLR-seq_HsBN_lib12
ENST00000678739.1	SLR-seq_HsBN_lib12
ENST00000678626.1	SLR-seq_HsBN_lib7
ENST00000679189.1	SLR-seq_HsBN_lib7
ENST00000679189.1	alternative 5' UTR
ENST00000677677.1	SLR-seq_HsBN_lib9
ENST00000677167.1	alternative 5' UTR
ENST00000679076.1	SLR-seq_TB0000033
ENST00000677444.1	PacBio_RACEseq_UKGTN_Kidney
ENST00000485278.5	protein-O-mannosyltransferase 1 (RT) (FLJ37239)
ENST00000677221.1	protein-O-mannosyltransferase 1 (RT)
ENST00000467848.1	protein-O-mannosyltransferase 1 (RT)
ENST00000494883.1	protein-O-mannosyltransferase 1 (RT)
ENST00000415423.1	putative novel transcript
ENST00000372210.7	uridine-cytidine kinase 1 (UCK1)
ENST00000372211.7	uridine-cytidine kinase 1 (UCK1)
ENST00000491309.5	uridine-cytidine kinase 1 (UCK1) (FLJ25119)
ENST00000372208.7	uridine-cytidine kinase 1 (UCK1)
ENST00000372215.5	MANE_select
ENST00000372215.5	uridine-cytidine kinase 1 (UCK1) (FLJ12255)
ENST00000484876.1	novel transcript
ENST00000494584.5	novel transcript
ENST00000459858.1	novel transcript
ENST00000482398.1	novel transcript
ENST00000636672.1	CAGE supported TSS
ENST00000372189.7	guanine nucleotide-releasing factor 2 (specific for crk proto-oncogene) (C3G)
ENST00000372189.7	non canonical U12
ENST00000372195.5	guanine nucleotide-releasing factor 2 (specific for crk proto-oncogene) (C3G)
ENST00000414781.1	guanine nucleotide-releasing factor 2 (specific for crk proto-oncogene) (C3G)
ENST00000419442.1	guanine nucleotide-releasing factor 2 (specific for crk proto-oncogene) (C3G)
ENST00000481260.1	guanine nucleotide-releasing factor 2 (specific for crk proto-oncogene) (C3G)
ENST00000438647.3	guanine nucleotide-releasing factor 2 (specific for crk proto-oncogene) (C3G)
ENST00000444708.1	putative novel transcript
ENST00000651950.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000292035.10	MANE_select
ENST00000474263.1	Sp1 transcriptional activation cofactor subunit 8 34 kDa
ENST00000393229.4	MANE_select
ENST00000393229.4	continues from bA5N16.1.1 in Em:AL353631
ENST00000393229.4	netrin G2 protein
ENST00000490694.1	novel transcript
ENST00000483055.1	novel transcript
ENST00000477049.1	KIAA0625 protein (contans FLJ10594)
ENST00000436441.5	KIAA0625 protein (contains FLJ10594)
ENST00000224140.6	MANE_select
ENST00000464133.1	novel transcript
ENST00000474172.1	novel transcript
ENST00000334270.3	MANE_select
ENST00000461970.1	novel transcript
ENST00000393216.3	MANE_select
ENST00000263610.7	BarH-like 1 (Drosophila) protein
ENST00000263610.7	MANE_select
ENST00000372155.2	DEAD/H box polypeptide 31
ENST00000372159.7	DEAD/H box polypeptide 31
ENST00000438527.7	CAGE supported TSS
ENST00000310532.6	DEAD/H box polypeptide 31
ENST00000480876.2	DEAD/H box polypeptide 31
ENST00000482620.1	DEAD/H box polypeptide 31
ENST00000483873.6	general transcription factor IIIC, polypeptide 4
ENST00000372146.5	MANE_select
ENST00000372146.5	general transcription factor IIIC, polypeptide 4
ENST00000298545.4	MANE_select
ENST00000298545.4	novel protein (FLJ32704)
ENST00000476719.1	novel transcript
ENST00000477396.5	novel transcript
ENST00000467161.1	novel transcript
ENST00000482422.1	novel transcript
ENST00000451318.2	putative novel transcript
ENST00000372136.7	chromosome 9 open reading frame 9 protein
ENST00000356311.10	MANE_select
ENST00000356311.10	chromosome 9 open reading frame 9 protein
ENST00000350499.6	chromosome 9 open reading frame 9 protein
ENST00000298552.9	MANE_select
ENST00000642627.1	NAGNAG splice site
ENST00000646625.1	alternative 5' UTR
ENST00000644097.1	NAGNAG splice site
ENST00000644097.1	alternative 5' UTR
ENST00000643875.1	alternative 5' UTR
ENST00000642811.1	alternative 5' UTR
ENST00000642617.1	NAGNAG splice site
ENST00000642617.1	NP_001155898.1
ENST00000644255.1	NAGNAG splice site
ENST00000644255.1	alternative 3' UTR
ENST00000493467.6	NAGNAG splice site
ENST00000642646.1	alternative 5' UTR
ENST00000645150.1	alternative 5' UTR
ENST00000647078.1	NAGNAG splice site
ENST00000647462.1	NAGNAG splice site
ENST00000644997.1	NAGNAG splice site
ENST00000645129.1	NAGNAG splice site
ENST00000475903.6	alternative 5' UTR
ENST00000475903.6	tuberous sclerosis 1
ENST00000461879.5	tuberous sclerosis 1
ENST00000490179.3	alternative 5' UTR
ENST00000490179.3	non canonical polymorphism
ENST00000490179.3	tuberous sclerosis 1
ENST00000646440.1	alternative 5' UTR
ENST00000339463.7	alternative 5' UTR
ENST00000636137.1	CAGE supported TSS
ENST00000372122.4	CAGE supported TSS
ENST00000372122.4	MANE_select
ENST00000372123.5	CAGE supported TSS
ENST00000440319.5	general transcription factor IIIC, polypeptide 5, 63kDa
ENST00000372097.10	MANE_select
ENST00000372097.10	general transcription factor IIIC, polypeptide 5, 63kDa
ENST00000372108.9	general transcription factor IIIC, polypeptide 5, 63kDa
ENST00000342018.12	QC splicing correct
ENST00000342018.12	general transcription factor IIIC, polypeptide 5, 63kDa
ENST00000439697.1	general transcription factor IIIC, polypeptide 5, 63kDa
ENST00000485692.1	general transcription factor IIIC, polypeptide 5, 63kDa
ENST00000461871.1	general transcription factor IIIC, polypeptide 5, 63kDa
ENST00000435745.1	general transcription factor IIIC, polypeptide 5, 63kDa
ENST00000489842.1	general transcription factor IIIC, polypeptide 5, 63kDa
ENST00000372080.8	MANE_select
ENST00000372080.8	upstream ATG
ENST00000482648.5	ral guanine nucleotide dissociation stimulator
ENST00000469972.5	ral guanine nucleotide dissociation stimulator
ENST00000493438.5	ral guanine nucleotide dissociation stimulator
ENST00000372047.7	ral guanine nucleotide dissociation stimulator
ENST00000393160.7	ral guanine nucleotide dissociation stimulator
ENST00000372050.8	MANE_select
ENST00000372050.8	ral guanine nucleotide dissociation stimulator
ENST00000498797.1	ral guanine nucleotide dissociation stimulator
ENST00000495621.1	ral guanine nucleotide dissociation stimulator
ENST00000477660.1	ral guanine nucleotide dissociation stimulator
ENST00000424572.1	ral guanine nucleotide dissociation stimulator
ENST00000471109.1	ral guanine nucleotide dissociation stimulator
ENST00000493067.5	ral guanine nucleotide dissociation stimulator
ENST00000460587.1	ral guanine nucleotide dissociation stimulator
ENST00000372040.9	Forssman glycolipid synthetase (FS)
ENST00000372040.9	MANE_select
ENST00000372043.7	Forssman glycolipid synthetase (FS)
ENST00000470431.5	Forssman glycolipid synthetase (FS)
ENST00000472281.5	Forssman glycolipid synthetase (FS)
ENST00000372038.7	Forssman glycolipid synthetase (FS)
ENST00000644196.1	alternative 5' UTR
ENST00000372036.4	Forssman glycolipid synthetase (FS)
ENST00000487864.1	Forssman glycolipid synthetase (FS)
ENST00000372034.7	odorant-binding protein 2B (OBP2B)
ENST00000461961.2	odorant-binding protein 2B (OBP2B)
ENST00000473737.5	odorant-binding protein 2B (OBP2B)
ENST00000680600.1	CAGE supported TSS
ENST00000453660.4	The ABO gene in this assembly produces a truncated protein without functional glycosyltransferase activity, thus indicative of blood group O. In fact, the gene is split between clones bA244N20 and bA430N14,  both of which encode truncated proteins. However, these clones contain different alleles, and this tile path has caused a chimeric form of the locus to be produced that does not exist in nature.  The locus is scheduled to be repaired by the Genome Reference Consortium
ENST00000372022.6	MANE_select
ENST00000372022.6	surfeit 6
ENST00000468290.1	surfeit 6
ENST00000343730.10	MANE_select
ENST00000343730.10	surfeit 5, isoform b
ENST00000610672.4	alternative 5' UTR
ENST00000610888.4	alternative 5' UTR
ENST00000614493.4	alternative 5' UTR
ENST00000614493.4	non canonical TEC
ENST00000471524.1	surfeit 5
ENST00000446777.5	QC splicing correct
ENST00000446777.5	alternative 5' UTR
ENST00000494177.6	alternative 5' UTR
ENST00000494177.6	non canonical TEC
ENST00000457204.2	alternative 5' UTR
ENST00000496554.5	ribosomal protein L7a
ENST00000323345.11	MANE_select
ENST00000323345.11	ribosomal protein L7a
ENST00000463740.5	ribosomal protein L7a
ENST00000426651.1	ribosomal protein L7a
ENST00000468019.5	ribosomal protein L7a
ENST00000485706.5	ribosomal protein L7a
ENST00000485706.5	this variant and variant 9 could be part of the same variant
ENST00000315731.4	ribosomal protein L7a
ENST00000489392.1	ribosomal protein L7a
ENST00000492798.1	ribosomal protein L7a
ENST00000492798.1	this variant and variant 7 could be part of the same variant
ENST00000371974.8	MANE_select
ENST00000371974.8	surfeit 1
ENST00000495952.5	surfeit 1
ENST00000437995.1	surfeit 1
ENST00000463965.1	surfeit 1
ENST00000371964.5	MANE_select
ENST00000371964.5	surfeit 2
ENST00000495524.5	surfeit 2
ENST00000486887.1	surfeit 2
ENST00000371989.8	MANE_select
ENST00000371989.8	surfeit 4
ENST00000485435.6	surfeit 4
ENST00000465565.1	surfeit 4
ENST00000467910.5	surfeit 4
ENST00000371991.3	surfeit 4
ENST00000371982.3	surfeit 4
ENST00000371957.4	MANE_select
ENST00000371957.4	novel protein (MGC43306)
ENST00000468046.1	putative novel transcript
ENST00000475232.1	novel transcript
ENST00000462310.1	putative novel transcript
ENST00000477284.1	QC splicing correct
ENST00000477284.1	putative novel transcript
ENST00000371942.8	MANE_select
ENST00000371942.8	Xenopus prevents mitotic catastrophe 2 homolog
ENST00000454825.1	Xenopus prevents mitotic catastrophe 2 homolog
ENST00000494045.5	Xenopus prevents mitotic catastrophe 2 homolog
ENST00000478037.1	Xenopus prevents mitotic catastrophe 2 homolog
ENST00000445916.1	Xenopus prevents mitotic catastrophe 2 homolog
ENST00000355699.7	MANE_select
ENST00000291722.11	chromosome 9 open reading frame 7
ENST00000316948.9	MANE_select
ENST00000316948.9	chromosome 9 open reading frame 7
ENST00000474734.5	chromosome 9 open reading frame 7
ENST00000489519.1	chromosome 9 open reading frame 7
ENST00000444798.1	chromosome 9 open reading frame 7
ENST00000371899.9	MANE_select
ENST00000371899.9	solute carrier family 2 (facilitated glucose transporter), member 6
ENST00000371897.8	solute carrier family 2 (facilitated glucose transporter), member 6
ENST00000485978.1	solute carrier family 2 (facilitated glucose transporter), member 6
ENST00000414172.1	solute carrier family 2 (facilitated glucose transporter), member 6
ENST00000339996.4	MANE_select
ENST00000651351.2	MANE_select
ENST00000651351.2	genebuild_only_MANE
ENST00000496132.2	CAGE supported TSS
ENST00000673969.1	CAGE supported TSS
ENST00000673969.1	MANE_select
ENST00000673969.1	alternative 5' UTR
ENST00000393056.8	MANE_select
ENST00000425189.1	novel transcript
ENST00000439388.6	MANE_select
ENST00000439388.6	genebuild_only_MANE
ENST00000371872.8	sarcosine dehydrogenase (SAR, SDH, SARD, DMGDHL1)
ENST00000371868.5	sarcosine dehydrogenase (SAR, SDH, SARD, DMGDHL1)
ENST00000469828.1	sarcosine dehydrogenase (SAR, SDH, SARD, DMGDHL1)
ENST00000427237.6	alternative 5' UTR
ENST00000427237.6	sarcosine dehydrogenase (SAR, SDH, SARD, DMGDHL1)
ENST00000371867.5	sarcosine dehydrogenase (SAR, SDH, SARD, DMGDHL1)
ENST00000406606.7	vav 2 oncogene
ENST00000371850.8	MANE_select
ENST00000371850.8	vav 2 oncogene
ENST00000371851.1	vav 2 oncogene
ENST00000486113.1	vav 2 oncogene
ENST00000472905.1	vav 2 oncogene
ENST00000603928.3	MANE_select
ENST00000603928.3	novel transcript (FLJ35348)
ENST00000603928.3	upstream uORF
ENST00000432807.1	alternative 5' UTR
ENST00000432807.1	novel transcript
ENST00000432807.1	upstream uORF
ENST00000303407.12	MANE_select
ENST00000371842.2	alternative 5' UTR
ENST00000433041.1	alternative 5' UTR
ENST00000412181.1	novel transcript (FLJ32958)
ENST00000608937.5	alternative 5' UTR
ENST00000608739.5	alternative 5' UTR
ENST00000358625.4	MANE_select
ENST00000417135.1	novel transcript
ENST00000623292.1	confirm experimentally
ENST00000481739.2	MANE_select
ENST00000481739.2	retinoid X receptor alpha
ENST00000356384.4	retinoid X receptor alpha
ENST00000649020.1	CAGE supported TSS
ENST00000444936.2	putative novel transcript
ENST00000435284.2	putative novel transcript
ENST00000446184.1	putative novel transcript
ENST00000371817.8	MANE_select
ENST00000371817.8	NP_000084
ENST00000464187.1	non canonical TEC
ENST00000666389.1	Assembled from SLRseq reads (SRP049776)
ENST00000291744.11	MANE_select
ENST00000371806.4	MANE_select
ENST00000371806.4	ficolin (collagen/fibrinogen domain containing) 1
ENST00000664778.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654026.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663742.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417054.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417054.2	QC splicing correct
ENST00000417054.2	novel transcript
ENST00000625008.1	confirm experimentally
ENST00000277415.15	NP_006325.1
ENST00000252854.8	NP_055094
ENST00000371793.8	MANE_select
ENST00000545657.1	not organism-supported
ENST00000452377.1	Putative novel transcript
ENST00000420883.1	Putative novel transcript
ENST00000650654.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000450850.1	putative novel transcript
ENST00000656211.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449637.1	suppressor of cytokine signaling 5 (SOCS5) pseudogene
ENST00000655118.1	Assembled from SLRseq reads (SRP049776)
ENST00000660718.1	Assembled from SLRseq reads (SRP049776)
ENST00000605286.5	alternative 5' UTR
ENST00000604351.5	alternative 5' UTR
ENST00000652373.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000356818.7	MANE_select
ENST00000356818.7	novel protein (KIAA0649)
ENST00000401470.3	alternative 5' UTR
ENST00000605660.1	alternative 5' UTR
ENST00000429260.7	MANE_select
ENST00000429260.7	NP_001041730.1
ENST00000371789.7	alternative 5' UTR
ENST00000371785.5	mitochondrial ribosomal protein S2
ENST00000241600.10	MANE_select
ENST00000241600.10	genebuild_only_MANE
ENST00000488610.5	mitochondrial ribosomal protein S2
ENST00000485333.5	mitochondrial ribosomal protein S2
ENST00000462948.5	mitochondrial ribosomal protein S2
ENST00000453385.1	mitochondrial ribosomal protein S2
ENST00000472946.1	mitochondrial ribosomal protein S2
ENST00000415062.1	novel transcript
ENST00000263598.6	lipocalin 1
ENST00000371781.4	MANE_select
ENST00000371781.4	lipocalin 1
ENST00000371781.4	variant 2; alternatively spliced in 3' UTR
ENST00000371776.6	MANE_select
ENST00000539850.1	alternative 3' UTR
ENST00000371768.7	progestagen-associated endometrial protein (placental protein 14, pregnancy-associated endometrial alpha-2-globulin, alpha uterine protein)
ENST00000479141.6	MANE_select
ENST00000479141.6	progestagen-associated endometrial protein (placental protein 14, pregnancy-associated endometrial alpha-2-globulin, alpha uterine protein)
ENST00000371766.6	non canonical TEC
ENST00000371766.6	progestagen-associated endometrial protein (placental protein 14, pregnancy-associated endometrial alpha-2-globulin, alpha uterine protein)
ENST00000371766.6	variant 2; alternatively spliced in 3' UTR
ENST00000277508.9	progestagen-associated endometrial protein (placental protein 14, pregnancy-associated endometrial alpha-2-globulin, alpha uterine protein)
ENST00000277508.9	variant 3; alternatively spliced in 3' UTR
ENST00000433563.5	progestagen-associated endometrial protein (placental protein 14, pregnancy-associated endometrial alpha-2-globulin, alpha uterine protein)
ENST00000418284.5	progestagen-associated endometrial protein (placental protein 14, pregnancy-associated endometrial alpha-2-globulin, alpha uterine protein)
ENST00000418284.5	variant 5; alternatively spliced in 3' UTR
ENST00000454923.5	progestagen-associated endometrial protein (placental protein 14, pregnancy-associated endometrial alpha-2-globulin, alpha uterine protein)
ENST00000454923.5	variant 8; alternatively spliced in 3' UTR
ENST00000457014.1	progestagen-associated endometrial protein (placental protein 14, pregnancy-associated endometrial alpha-2-globulin, alpha uterine protein)
ENST00000457014.1	variant 6; alternatively spliced in 3' UTR
ENST00000447907.5	novel transcript
ENST00000445997.1	novel transcript
ENST00000447497.1	novel protein
ENST00000434190.1	progestagen-associated endometrial protein pseudogene (PAEP)
ENST00000430816.3	LOC102723971
ENST00000430816.3	MANE_select
ENST00000371763.6	MANE_select
ENST00000371763.6	NP_892019.2
ENST00000425225.2	MANE_select
ENST00000487664.5	confirm experimentally
ENST00000371757.7	MANE_select
ENST00000628528.2	NP_001258932.1
ENST00000628528.2	potassium channel, subfamily T, member 1
ENST00000674572.1	upstream ATG
ENST00000473941.5	CAGE supported TSS
ENST00000486577.6	CAGE supported TSS
ENST00000263604.5	CAGE supported TSS
ENST00000631073.2	CAGE supported TSS
ENST00000488444.6	confirm experimentally
ENST00000490355.6	CAGE supported TSS
ENST00000675090.1	CHESS_transcripts
ENST00000636003.1	NAGNAG splice site
ENST00000675102.1	align_id:3765837|asmbl_256002
ENST00000389532.9	MANE_select
ENST00000389532.9	novel protein (contains DKFZp434G2311)
ENST00000483991.5	novel transcript
ENST00000493088.1	novel protein
ENST00000492174.1	novel transcript
ENST00000468150.1	novel transcript
ENST00000460094.1	novel transcript
ENST00000423793.1	novel transcript
ENST00000651515.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000371756.4	MANE_select
ENST00000371756.4	putative glialblastoma cell differentiation-related (GDBR1)
ENST00000489050.5	novel transcript
ENST00000489050.5	this variant and either of variant fragments .3.3 and .3.5 could be part of one single variant
ENST00000465873.5	novel transcript
ENST00000465873.5	this variant and variant fragment .3.6 could be part of one single variant
ENST00000471163.1	novel transcript
ENST00000471163.1	this variant and variant fragment .3.6 could be part of one single variant
ENST00000478485.1	novel transcript
ENST00000486258.1	novel transcript
ENST00000371753.5	novel protein (MGC23427)
ENST00000277554.4	MANE_select
ENST00000277554.4	genebuild_only_MANE
ENST00000467669.1	putative novel transcript
ENST00000418388.6	MANE_select
ENST00000447934.1	alternative 5' UTR
ENST00000448040.2	alternative 5' UTR
ENST00000371746.9	CAGE supported TSS
ENST00000371746.9	LR annotation
ENST00000371748.10	CAGE supported TSS
ENST00000371748.10	LR annotation
ENST00000371748.10	MANE_select
ENST00000358701.10	DKFZp762A2013
ENST00000358701.10	MANE_select
ENST00000455222.1	novel protein
ENST00000440944.6	MANE_select
ENST00000392944.5	activator of G-protein signalling 3 (AGS3)
ENST00000291775.3	alternative 5' UTR
ENST00000291775.3	alternatively spliced in 5' UTR, shares CDS with bB270L15.1.2
ENST00000371739.3	QC splicing correct
ENST00000371738.4	MANE_select
ENST00000460290.5	caspase recruitment domain family, member 9
ENST00000371732.10	MANE_select
ENST00000371732.10	caspase recruitment domain family, member 9
ENST00000371734.7	caspase recruitment domain family, member 9
ENST00000298532.2	small nuclear RNA activating complex, polypeptide 4, 190kDa (SNAP190, PTalpha)
ENST00000357365.8	MANE_select
ENST00000298537.11	Start agrees with that found in mouse, which has an upstream stop codon (not present in human)
ENST00000371720.5	inositol polyphosphate-5-phosphatase 72kDa
ENST00000371717.8	MANE_select
ENST00000371717.8	inositol polyphosphate-5-phosphatase 72kDa
ENST00000610649.4	NMD likely if extended
ENST00000462616.1	inositol polyphosphate-5-phosphatase 72kDa
ENST00000444897.2	inositol polyphosphate-5-phosphatase 72kDa
ENST00000371712.4	MANE_select
ENST00000467838.2	novel transcript
ENST00000277537.10	novel protein (KIAA0310)
ENST00000453963.5	novel protein (KIAA0310)
ENST00000371706.7	novel protein (KIAA0310)
ENST00000313084.9	novel protein (KIAA0310)
ENST00000472305.1	novel transcript
ENST00000680778.1	CAGE supported TSS
ENST00000679595.1	Notch homolog 1, translocation-associated (Drosophila) (hn1, TAN1)
ENST00000651671.1	LR annotation
ENST00000651671.1	MANE_select
ENST00000491649.2	Notch homolog 1, translocation-associated (Drosophila) (hn1, TAN1)
ENST00000439501.1	novel transcript
ENST00000429224.1	QC splicing correct
ENST00000429224.1	novel transcript
ENST00000450304.1	novel transcript
ENST00000674687.1	LOC101928612
ENST00000674687.1	novel transcript
ENST00000371699.5	NEU1 protein (ZNEU1)
ENST00000308874.12	MANE_select
ENST00000308874.12	genebuild_only_MANE
ENST00000406555.7	NEU1 protein (ZNEU1)
ENST00000406555.7	alternative 5' UTR
ENST00000406555.7	alternatively spliced 5' UTR, shares CDS with bA251M2.2.1
ENST00000492862.6	QC splicing correct
ENST00000492862.6	alternative 5' UTR
ENST00000492862.6	novel transcript
ENST00000490469.5	novel transcript
ENST00000492002.1	novel transcript
ENST00000371698.3	NEU1 protein (ZNEU1)
ENST00000371698.3	alternative 5' UTR
ENST00000371698.3	alternatively spliced 5' UTR, shares CDS with bA251M2.2.1
ENST00000371696.7	MANE_select
ENST00000470861.1	)
ENST00000371692.9	MANE_select
ENST00000371692.9	novel protein similar to mouse pancreatitis-induced protein 49 (PIP49)
ENST00000371691.5	novel protein similar to mouse pancreatitis-induced protein 49  (PIP49)
ENST00000371691.5	novel protein similar to mouse pancreatitis-induced protein 49 (PIP49)
ENST00000414282.5	novel transcript (FLJ30346)
ENST00000436596.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000436596.2	novel transcript
ENST00000663097.1	Assembled from SLRseq reads (SRP049776)
ENST00000653276.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653276.1	Assembled from SLRseq reads (SRP049776)
ENST00000668354.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000416970.5	novel transcript (FLJ30346)
ENST00000447221.1	novel transcript (FLJ30346)
ENST00000341040.11	novel transcript (LOC158062)
ENST00000341040.11	this variant and variant fragment .3.4 could be part of one single variant
ENST00000497771.6	MANE_select
ENST00000497771.6	NP_001001712.2
ENST00000435202.5	LOC158062
ENST00000341206.9	MANE_select
ENST00000480597.5	novel transcript
ENST00000479767.1	novel transcript
ENST00000482893.1	novel transcript, variant 3 (FLJ33328)
ENST00000371688.8	MANE_select
ENST00000371688.8	novel protein similar to mouse lipocalin 8 (EP17, Lcn5)
ENST00000495223.1	QC splicing correct
ENST00000495223.1	novel transcript
ENST00000316144.6	MANE_select
ENST00000482511.1	novel transcript
ENST00000290079.9	MANE_select
ENST00000338005.7	MANE_select
ENST00000479371.5	NAGNAG splice site
ENST00000484858.1	novel transcript
ENST00000484858.1	this variant and one or more of variant fragments .7.1, .7.2 and .7.3 could be part of one single variant
ENST00000311502.12	MANE_select
ENST00000484471.6	QC splicing correct
ENST00000371663.10	NAGNAG splice site
ENST00000357466.6	non canonical TEC
ENST00000357466.6	novel protein
ENST00000464941.5	novel protein, variant 2 (FLJ37063)
ENST00000436380.5	NAGNAG splice site
ENST00000466096.5	novel transcript
ENST00000461992.1	novel protein
ENST00000435930.1	novel protein, variant 5 (FLJ40767)
ENST00000436881.2	NP_001073951.2
ENST00000436881.2	confirm experimentally
ENST00000371661.5	phosphohistidine phosphatase (PHP14)
ENST00000492540.5	novel transcript
ENST00000247665.12	MANE_select
ENST00000247665.12	phosphohistidine phosphatase (PHP14)
ENST00000462205.5	novel transcript
ENST00000497413.1	novel transcript
ENST00000463215.1	novel transcript
ENST00000485732.5	novel transcript, variant 1 (DKFZp43I1716)
ENST00000317446.7	MANE_select
ENST00000481327.1	novel transcript
ENST00000479475.1	novel protein, variant 3 (DKFZp434M1411)
ENST00000371649.5	endothelial differentiation-related factor 1 (MBF1, EDF-1)
ENST00000224073.6	MANE_select
ENST00000224073.6	endothelial differentiation-related factor 1 (MBF1, EDF-1)
ENST00000371648.4	endothelial differentiation-related factor 1 (MBF1, EDF-1)
ENST00000419057.5	TNF receptor-associated factor 2 (TRAP, TRAP3)
ENST00000419057.5	alternative 5' UTR
ENST00000419057.5	alternatively spliced 5' UTR, shares CDS with bA216L13.13.1
ENST00000429509.5	TNF receptor-associated factor 2 (TRAP, TRAP3)
ENST00000429509.5	alternative 5' UTR
ENST00000429509.5	alternatively spliced 5' UTR, shares CDS with bA216L13.13.1
ENST00000247668.7	MANE_select
ENST00000247668.7	TNF receptor-associated factor 2 (TRAP, TRAP3)
ENST00000414589.1	TNF receptor-associated factor 2 (TRAP, TRAP3)
ENST00000414589.1	alternative 5' UTR
ENST00000414589.1	alternatively spliced 5' UTR, shares CDS with bA216L13.13.1
ENST00000474950.5	TNF receptor-associated factor 2 (TRAP, TRAP3)
ENST00000474950.5	this variant and variant fragment .1.9 could be part of one single variant
ENST00000482854.5	TNF receptor-associated factor 2 (TRAP, TRAP3)
ENST00000482854.5	this variant and variant fragment .1.9 could be part of one single variant
ENST00000469701.1	TNF receptor-associated factor 2 (TRAP, TRAP3)
ENST00000469701.1	this variant and variant fragment .1.9 could be part of one single variant
ENST00000466107.1	TNF receptor-associated factor 2 (TRAP, TRAP3, MGC:45012)
ENST00000466107.1	this variant and one or more of variant fragments .1.6, .1.7 and .1.8 could be part of one single variant
ENST00000395082.2	ribosomal protein L30 (RPL30) pseudogene
ENST00000325285.8	MANE_select
ENST00000325285.8	novel protein (likely ortholog of mouse f-box and WD-40 domain protein 5 (FBXW5))
ENST00000480818.3	novel transcript
ENST00000491246.4	novel transcript
ENST00000428398.5	novel protein (likely ortholog of mouse f-box and WD-40 domain protein 5 (FBXW5))
ENST00000443788.1	novel protein (likely ortholog of mouse f-box and WD-40 domain protein 5 (FBXW5))
ENST00000371634.7	CAGE supported TSS
ENST00000371634.7	CARS
ENST00000371634.7	LR annotation
ENST00000371634.7	MANE_select
ENST00000647910.1	complement component 8, gamma polypeptide
ENST00000484376.1	complement component 8, gamma polypeptide
ENST00000465773.1	complement component 8, gamma polypeptide
ENST00000484304.1	novel transcript
ENST00000371633.8	MANE_select
ENST00000492820.5	novel transcript
ENST00000495410.1	QC splicing correct
ENST00000495410.1	novel transcript
ENST00000491603.5	novel transcript
ENST00000463714.2	novel transcript
ENST00000471615.6	novel protein
ENST00000371632.7	novel protein
ENST00000494713.5	novel transcript
ENST00000476751.5	novel protein
ENST00000466277.5	novel transcript
ENST00000480204.1	novel protein
ENST00000371629.1	novel protein
ENST00000640716.1	alternative 5' UTR
ENST00000640716.1	upstream uORF
ENST00000413913.2	QC splicing correct
ENST00000413913.2	novel transcript
ENST00000371625.8	MANE_select
ENST00000371625.8	prostaglandin D2 synthase 21kDa (brain)
ENST00000457950.5	prostaglandin D2 synthase 21kDa (brain)
ENST00000371623.5	prostaglandin D2 synthase 21kDa (brain)
ENST00000492068.2	prostaglandin D2 synthase 21kDa (brain)
ENST00000460340.1	prostaglandin D2 synthase 21kDa (brain)
ENST00000446677.2	prostaglandin D2 synthase 21kDa (brain)
ENST00000462514.1	prostaglandin D2 synthase 21kDa (brain)
ENST00000444903.2	prostaglandin D2 synthase 21kDa (brain)
ENST00000408973.3	MANE_select
ENST00000371620.4	MANE_select
ENST00000371620.4	novel protein
ENST00000481187.5	novel transcript
ENST00000483807.5	novel protein
ENST00000498095.4	novel transcript
ENST00000493968.5	novel transcript
ENST00000467845.5	novel transcript
ENST00000492564.2	novel transcript
ENST00000463765.1	novel transcript
ENST00000494426.2	MANE_select
ENST00000494426.2	chloride intracellular channel 3
ENST00000480181.1	chloride intracellular channel 3
ENST00000473911.1	chloride intracellular channel 3
ENST00000341511.11	ATP-binding cassette, sub-family A (ABC1), member 2
ENST00000341511.11	MANE_select
ENST00000479446.5	ATP-binding cassette, sub-family A (ABC1), member 2
ENST00000459850.5	ATP-binding cassette, sub-family A (ABC1), member 2
ENST00000464157.1	ATP-binding cassette, sub-family A (ABC1), member 2
ENST00000463603.5	ATP-binding cassette, sub-family A (ABC1), member 2
ENST00000437791.2	ATP-binding cassette, sub-family A (ABC1), member 2
ENST00000488535.2	ATP-binding cassette, sub-family A (ABC1), member 2
ENST00000466707.1	ATP-binding cassette, sub-family A (ABC1), member 2
ENST00000492260.5	ATP-binding cassette, sub-family A (ABC1), member 2
ENST00000467624.1	ATP-binding cassette, sub-family A (ABC1), member 2
ENST00000464876.5	ATP-binding cassette, sub-family A (ABC1), member 2
ENST00000398207.8	ATP-binding cassette, sub-family A (ABC1), member 2
ENST00000425423.1	ATP-binding cassette, sub-family A (ABC1), member 2
ENST00000457302.2	putativel novel transcript
ENST00000314412.7	MANE_select
ENST00000371601.5	MANE_select
ENST00000496498.1	neural proliferation, differentiation and control, 1
ENST00000472668.1	neural proliferation, differentiation and control, 1
ENST00000488145.1	neural proliferation, differentiation and control, 1
ENST00000485589.1	neural proliferation, differentiation and control, 1
ENST00000460614.1	ectonucleoside triphosphate diphosphohydrolase 2
ENST00000355097.7	MANE_select
ENST00000355097.7	ectonucleoside triphosphate diphosphohydrolase 2
ENST00000469106.4	NMD likely if extended
ENST00000469106.4	ectonucleoside triphosphate diphosphohydrolase 2
ENST00000439076.2	novel transcript
ENST00000435463.2	putative novel transcript
ENST00000409687.5	MANE_select
ENST00000456356.2	putative novel transcript
ENST00000409858.8	MANE_select
ENST00000371589.9	MANE_select
ENST00000371579.7	MANE_select
ENST00000371561.8	MANE_select
ENST00000350902.9	Translation in Tr:Q59GW0 looks unconvincing
ENST00000371546.8	Based on rat cDNA
ENST00000371550.8	Based on rat cDNA
ENST00000371553.7	Based on rat cDNA
ENST00000371555.8	Based on rat cDNA
ENST00000371559.8	Based on rat cDNA
ENST00000675295.1	NMD likely if extended
ENST00000485413.1	This variant and variant fragment .3.9 could be part of a single variant
ENST00000462584.1	glutamate receptor, ionotropic, N-methyl D-aspartate 1 (NR1, NMDA1, NMDAR1)
ENST00000462584.1	this variant and variant fragment .3.2 could be part of a single variant
ENST00000371542.3	MANE_select
ENST00000430332.1	NMD likely if extended
ENST00000413619.3	MANE_select
ENST00000487917.1	novel transcript
ENST00000487917.1	this variant and one of variant fragments .5.6 or .5.7 could be part of a single variant
ENST00000323927.3	MANE_select
ENST00000493730.1	novel transcript
ENST00000493730.1	this variant and one of variant fragments .5.6 or .5.7 could be part of a single variant
ENST00000483432.1	novel transcript
ENST00000485970.1	novel transcript
ENST00000485970.1	this variant and one of variant fragments .5.6 or .5.7 could be part of a single variant
ENST00000471131.2	this variant and one or more of variant fragments .5.2, .5.4 and .5.5 could be part of a single variant
ENST00000495611.1	novel transcript
ENST00000495611.1	this variant and one or more of variant fragments .5.2, .5.4 and .5.5 could be part of a single variant
ENST00000459860.1	Sjogren's syndrome nuclear autoantigen 1
ENST00000322310.10	MANE_select
ENST00000463511.1	Sjogren's syndrome nuclear autoantigen 1
ENST00000464553.2	Sjogren's syndrome nuclear autoantigen 1
ENST00000409012.6	CAGE supported TSS
ENST00000409012.6	LR annotation
ENST00000409012.6	MANE_select
ENST00000343666.6	MANE_select
ENST00000645271.1	CAGE supported TSS
ENST00000392827.2	QC splicing correct
ENST00000650725.2	MANE_select
ENST00000650725.2	upstream ATG
ENST00000445101.4	MANE_select
ENST00000673865.1	alternative 5' UTR
ENST00000673835.1	MANE_select
ENST00000673835.1	NAGNAG splice site
ENST00000673835.1	alternative 5' UTR
ENST00000673953.1	NAGNAG splice site
ENST00000673953.1	alternative 5' UTR
ENST00000361134.2	NAGNAG splice site
ENST00000340384.5	MANE_select
ENST00000344774.6	MANE_select
ENST00000412566.5	NP_001004353.2
ENST00000343053.6	MANE_select
ENST00000357503.3	MANE_select
ENST00000356628.4	MANE_select
ENST00000340951.9	MANE_select
ENST00000371506.7	MANE_select
ENST00000371475.9	CAGE supported TSS
ENST00000371475.9	MANE_select
ENST00000371482.5	nasal embryonic luteinizing hormone-releasing hormone factor (DKFZP586J1624)
ENST00000371472.6	non canonical TEC
ENST00000484316.5	novel transcript
ENST00000482448.1	novel transcript
ENST00000371468.1	nasal embryonic luteinizing hormone-releasing hormone factor (DKFZP586J1624)
ENST00000406427.6	MANE_select
ENST00000406427.6	genebuild_only_MANE
ENST00000492278.5	novel transcript
ENST00000469998.1	novel transcript
ENST00000487228.1	novel transcript
ENST00000434090.2	NMD likely if extended
ENST00000491019.2	novel protein (FLJ31318)
ENST00000371443.6	MANE_select
ENST00000371443.6	mitochondrial ribosomal protein L41 (RPML27, MRP-L270)
ENST00000277540.7	MANE_select
ENST00000277540.7	novel protein (LOC9271)
ENST00000467243.5	extra base in genomic sequence at 119345bp changes the frame of the translation so cannot get the translation found in sequence EM:BC040173.1.
ENST00000467243.5	novel transcript
ENST00000479650.5	novel transcript
ENST00000497237.5	novel transcript
ENST00000475100.5	novel transcript
ENST00000472113.5	novel transcript
ENST00000485189.5	novel transcript
ENST00000467768.5	novel transcript
ENST00000477690.1	novel transcript
ENST00000470855.5	novel transcript
ENST00000481839.5	novel transcript
ENST00000476303.1	novel transcript
ENST00000460572.1	novel transcript
ENST00000491359.1	novel transcript
ENST00000298585.3	MANE_select
ENST00000298585.3	melanin-concentrating hormone receptor 1 interacting zinc-finger protein (ZMYND17) (MIZIP)
ENST00000471957.1	novel transcript
ENST00000483563.5	novel transcript
ENST00000371421.9	MANE_select
ENST00000371421.9	novel protein (MGC40555)
ENST00000431925.6	novel protein (MGC40555)
ENST00000461627.1	novel protein (MGC40555)
ENST00000419386.1	novel protein (MGC40555)
ENST00000466367.5	novel transcript
ENST00000471125.5	novel transcript
ENST00000495220.5	novel transcript
ENST00000491911.5	novel transcript
ENST00000497877.5	novel transcript
ENST00000468983.1	novel transcript
ENST00000475658.1	novel transcript
ENST00000637510.1	NMD likely if extended
ENST00000371417.3	The translation differs from that in EM:AF267857.1 due to an extra c at position 170479 in the genomic sequence which changes the frame.
ENST00000371417.3	novel protein
ENST00000496793.2	Extended 3' end with Assembled from SLRseq reads (SRP049776)
ENST00000496793.2	novel transcript
ENST00000663398.1	Assembled from SLRseq reads (SRP049776)
ENST00000630754.2	alternative 5' UTR
ENST00000460843.6	MANE_select
ENST00000460843.6	NP_079033.4
ENST00000460843.6	upstream ATG
ENST00000626216.2	alternative 5' UTR
ENST00000636027.1	CAGE supported TSS
ENST00000636027.1	alternative 5' UTR
ENST00000636027.1	upstream ATG
ENST00000492232.5	CAGE supported TSS
ENST00000460486.3	CAGE supported TSS
ENST00000637161.1	CAGE supported TSS
ENST00000629417.1	CAGE supported TSS
ENST00000629417.1	alternative 5' UTR
ENST00000637318.1	CAGE supported TSS
ENST00000637318.1	alternative 5' UTR
ENST00000478940.1	CAGE supported TSS
ENST00000640639.1	CAGE supported TSS
ENST00000462942.3	euchromatic histone methyltransferase 1 (FLJ12879, KIAA1876) (Eu-HMTase1)
ENST00000493484.5	CAGE supported TSS
ENST00000482340.5	CAGE supported TSS
ENST00000486164.5	343589  343671
ENST00000587008.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000371372.6	MANE_select
ENST00000371372.6	calcium channel, voltage-dependent, L type, alpha 1B subunit (CACNN, CACNL1A5)
ENST00000371372.6	non canonical conserved
ENST00000277551.6	U12 unconfirmed by database U12DB
ENST00000277551.6	calcium channel, voltage-dependent, L type, alpha 1B subunit (CACNN, CACNL1A5)
ENST00000277551.6	non canonical TEC
ENST00000277551.6	non canonical U12
ENST00000371363.5	non canonical conserved
ENST00000371357.5	non canonical conserved
ENST00000413253.1	calcium channel, voltage-dependent, L type, alpha 1B subunit (CACNN, CACNL1A5)
ENST00000442569.1	pseudogene similar to part of interleukin 9 receptor (ILR9)
ENST00000508529.3	tubulin, beta polypeptide 4, member Q (TUBB4Q) pseudogene
ENST00000428088.1	putative novel transcript
ENST00000446912.3	QC splicing correct
ENST00000562162.1	putative novel transcript
ENST00000416477.1	novel pseudogene (FLJ40100)
ENST00000568584.6	MANE_select
ENST00000423948.1	interleukin 9 receptor (IL9R) pseudogene
ENST00000439456.5	alternative 5' UTR
ENST00000397962.8	alternative 5' UTR
ENST00000509513.6	NAGNAG splice site
ENST00000509513.6	NP_997644.2
ENST00000381591.5	NP_006615.2
ENST00000381604.9	MANE_select
ENST00000602682.6	NP_001189394.1
ENST00000627286.2	NAGNAG splice site
ENST00000381584.5	QC splicing correct
ENST00000558098.4	NP_001189397.1
ENST00000280886.12	MANE_select
ENST00000434695.2	QC splicing correct
ENST00000425723.2	putative novel transcript
ENST00000451601.1	putative novel transcript
ENST00000441152.3	novel protein (FLJ38681)
ENST00000651360.1	PASA_cluster_2283
ENST00000651360.1	align_id:3536488|asmbl_26653
ENST00000443662.2	PASA_cluster_2283
ENST00000443662.2	align_id:3536487|asmbl_26652
ENST00000316157.8	MANE_select
ENST00000316157.8	novel protein (KIAA0217)
ENST00000448368.5	novel protein
ENST00000440895.2	novel protein
ENST00000469487.1	putative novel transcript
ENST00000476529.5	novel transcript
ENST00000406525.6	alternative 5' UTR
ENST00000406525.6	novel protein
ENST00000481118.1	NMD likely if extended
ENST00000481118.1	novel transcript
ENST00000412411.1	alternative 5' UTR
ENST00000435531.1	novel transcript
ENST00000360803.9	G protein-binding protein CRFG (NGB, FLJ10686, FLJ10690)
ENST00000360803.9	MANE_select
ENST00000491635.1	G protein-binding protein CRFG (FLJ39774)
ENST00000360059.5	G protein-binding protein CRFG
ENST00000491261.1	G protein-binding protein CRFG
ENST00000277517.2	MANE_select
ENST00000277517.2	diphosphate dimethylallyl diphosphate isomerase 2 (IDI2)
ENST00000428780.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000428780.3	novel transcript
ENST00000665330.1	Assembled from SLRseq reads (SRP049776)
ENST00000665330.1	novel transcript (HT009)
ENST00000437374.6	Assembled from SLRseq reads (SRP049776)
ENST00000420381.5	novel transcript
ENST00000434470.1	novel transcript
ENST00000656158.1	Assembled from SLRseq reads (SRP049776)
ENST00000429642.2	CAGE supported TSS
ENST00000429642.2	isopentenyl-diphosphate delta isomerase
ENST00000381344.8	MANE_select
ENST00000381344.8	isopentenyl-diphosphate delta isomerase
ENST00000491735.1	isopentenyl-diphosphate delta isomerase
ENST00000427898.5	isopentenyl-diphosphate delta isomerase
ENST00000482091.1	isopentenyl-diphosphate delta isomerase
ENST00000358220.5	QC splicing correct
ENST00000263150.9	MANE_select
ENST00000263150.9	novel protein
ENST00000381329.5	There is a SNP C-> T located at position 24113 within the genomic clone RP11-529L18 which causes a premature stop and protein of  249 aa instead of size 264 aa
ENST00000381329.5	novel protein (BC018044)
ENST00000650072.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000436154.1	novel protein
ENST00000482165.1	novel transcript
ENST00000425630.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652683.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000647993.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000655745.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666348.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000381312.6	MANE_select
ENST00000381310.7	double-stranded RNA specific adenosine deaminase (ADAR3)(FLJ30545)
ENST00000474762.5	novel transcript
ENST00000490172.1	novel transcript (FLJ25034)
ENST00000381305.1	double-stranded RNA specific adenosine deaminase (ADAR3)
ENST00000477140.1	putative novel transcript
ENST00000469464.1	novel transcript (FLJ36975)
ENST00000658498.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432987.1	putative novel transcript
ENST00000421697.2	putative novel transcript
ENST00000381301.3	novel protein
ENST00000653889.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671670.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667563.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413603.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413603.6	novel transcript (FLJ40155)
ENST00000665101.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654063.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438372.1	novel transcript
ENST00000454424.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000454424.2	putative novel transcript
ENST00000664401.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660120.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664577.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435539.1	QC splicing correct
ENST00000435539.1	putative novel transcript
ENST00000658923.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000421077.1	putative novel transcript (FLJ31539)
ENST00000418524.6	novel transcript
ENST00000436003.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436003.3	QC splicing correct
ENST00000418295.1	novel transcript
ENST00000668732.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000414107.6	putative novel transcript
ENST00000658961.1	putative novel transcript
ENST00000662131.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439973.2	QC splicing correct
ENST00000439973.2	putative novel transcript
ENST00000667195.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000431209.1	putative novel transcript
ENST00000664280.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656735.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438753.1	putative novel transcript
ENST00000437289.1	putative novel transcript
ENST00000656797.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665481.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658050.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671591.1	Assembled from SLRseq reads (SRP049776)
ENST00000419388.1	novel pseudogene
ENST00000439575.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439575.2	novel transcript
ENST00000658425.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000381125.9	MANE_select
ENST00000495715.1	phosphofructokinase, platelet
ENST00000381075.7	align_id:3536607|asmbl_26772
ENST00000381075.7	upstream ATG
ENST00000677351.1	align_id:3536752|asmbl_26917
ENST00000678206.1	align_id:3536644|asmbl_26809
ENST00000676796.1	align_id:3536609|asmbl_26774
ENST00000676796.1	upstream uORF
ENST00000421751.1	NMD likely if extended
ENST00000421751.1	phosphofructokinase, platelet
ENST00000407806.2	phosphofructokinase, platelet
ENST00000415005.6	phosphofructokinase, platelet
ENST00000468050.1	phosphofructokinase, platelet
ENST00000460445.1	phosphofructokinase, platelet
ENST00000413079.1	phosphofructokinase, platelet
ENST00000381072.5	phosphofructokinase, platelet
ENST00000433193.2	phosphofructokinase, platelet
ENST00000676917.1	compmerge.7785.pooled.chr10
ENST00000678756.1	compmerge.7787.pooled.chr10
ENST00000464395.1	pitrilysin metalloproteinase 1 (MP1, hMP1, KIAA1104)
ENST00000678811.1	pacbio_capture_seq
ENST00000224949.9	MANE_select
ENST00000224949.9	pitrilysin metalloproteinase 1 (MP1, hMP1, KIAA1104)
ENST00000676719.1	pitrilysin metalloproteinase 1 (MP1, hMP1, KIAA1104)
ENST00000676519.1	align_id:3536718|asmbl_26883
ENST00000676519.1	long_read_pipeline_2
ENST00000676953.1	align_id:3536685|asmbl_26850
ENST00000676953.1	long_read_pipeline_2
ENST00000678986.1	align_id:3536708|asmbl_26873
ENST00000677001.1	align_id:3536674|asmbl_26839
ENST00000677817.1	align_id:3536697|asmbl_26862
ENST00000679134.1	align_id:3536722|asmbl_26887
ENST00000678441.1	align_id:3536720|asmbl_26885
ENST00000455371.5	pitrilysin metalloproteinase 1 (MP1, hMP1, KIAA1104)
ENST00000451454.5	pitrilysin metalloproteinase 1 (MP1, hMP1, KIAA1104)
ENST00000424714.1	pitrilysin metalloproteinase 1 (MP1, hMP1, KIAA1104)
ENST00000679210.1	long_read_pipeline_2
ENST00000430362.2	pitrilysin metalloproteinase 1 (MP1, hMP1, KIAA1104)
ENST00000488065.2	pitrilysin metalloproteinase 1 (MP1, hMP1, KIAA1104)
ENST00000430356.3	novel transcript (FLJ40226)
ENST00000663204.1	Assembled from SLRseq reads (SRP049776)
ENST00000445932.1	novel transcript
ENST00000669318.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669318.1	Assembled from SLRseq reads (SRP049776)
ENST00000655354.1	Assembled from SLRseq reads (SRP049776)
ENST00000417149.2	Extended from assembled from SLRseq reads (ENA:SRP049776)
ENST00000417149.2	novel transcript
ENST00000665182.1	Assembled from SLRseq reads (SRP049776)
ENST00000436340.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436340.2	QC splicing correct
ENST00000662361.1	Assembled from SLRseq reads (SRP049776)
ENST00000657119.1	Assembled from SLRseq reads (SRP049776)
ENST00000661754.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659295.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660786.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668930.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655104.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668764.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670953.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659699.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669330.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659369.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656403.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664866.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413993.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413993.2	novel transcript
ENST00000664039.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660919.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659887.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000656568.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665584.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666496.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670496.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658910.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000426811.1	QC splicing correct
ENST00000413757.1	putative novel transcript
ENST00000654955.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661014.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000421629.2	novel transcript
ENST00000670656.1	Assembled from SLRseq reads (SRP049776)
ENST00000415358.1	putative novel transcript
ENST00000461124.1	core promoter element binding protein (GBF, ZF9, Zf9, BCD1, CPBP, KLF6)
ENST00000497571.6	MANE_select
ENST00000497571.6	core promoter element binding protein (GBF, ZF9, Zf9, BCD1, CPBP, KLF6)
ENST00000173785.4	core promoter element binding protein (GBF, ZF9, Zf9, BCD1, CPBP, KLF6)
ENST00000492125.1	core promoter element binding protein (GBF, ZF9, Zf9, BCD1, CPBP, KLF6)
ENST00000469435.1	core promoter element binding protein (GBF, ZF9, Zf9, BCD1, CPBP, KLF6)
ENST00000380946.3	core promoter element binding protein (GBF, ZF9, Zf9, BCD1, CPBP, KLF6)
ENST00000668154.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413339.1	putative novel transcript
ENST00000664393.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656136.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657212.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655417.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648503.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000432452.2	QC splicing correct
ENST00000657196.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000455525.1	putative novel transcript
ENST00000656775.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661283.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660544.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658139.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667089.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665828.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659944.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000455199.1	novel transcript (FLJ31241)
ENST00000659601.1	Assembled from SLRseq reads (SRP049776)
ENST00000662921.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665013.1	Assembled from SLRseq reads (SRP049776)
ENST00000661427.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668887.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668887.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000663702.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666481.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658856.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658440.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655688.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668893.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654788.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000418372.1	putative novel transcript
ENST00000659068.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000454152.1	putative novel transcript (FLJ38380)
ENST00000655424.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000434902.1	putative novel transcript
ENST00000420082.1	novel transcript
ENST00000668998.1	Assembled from SLRseq reads (SRP049776)
ENST00000660243.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430998.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000430998.7	novel transcript
ENST00000659646.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667425.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000443994.1	novel transcript
ENST00000449712.1	novel transcript
ENST00000665967.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417883.2	novel transcript
ENST00000665287.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654330.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661397.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656425.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654260.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653457.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000663142.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668784.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670284.1	Assembled from SLRseq reads (SRP049776)
ENST00000462718.7	QC splicing correct
ENST00000298375.12	MANE_select
ENST00000432950.1	aldo-keto reductase pseudogene
ENST00000477661.1	aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)
ENST00000380872.9	MANE_select
ENST00000380872.9	aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)
ENST00000442997.5	aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)
ENST00000380859.1	aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)
ENST00000476100.1	aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)
ENST00000421196.7	alternative 5' UTR
ENST00000470862.6	QC splicing correct
ENST00000380554.5	MANE_select
ENST00000380554.5	QC splicing correct
ENST00000427165.1	aldo-keto reductase pseudogene
ENST00000469875.2	QC splicing correct
ENST00000469875.2	aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol
ENST00000263126.3	MANE_select
ENST00000263126.3	genebuild_only_MANE
ENST00000656002.1	Assembled from RACEseq reads
ENST00000428920.2	QC splicing correct
ENST00000449457.1	putative novel transcript
ENST00000451325.1	ribosomal protein L26 (RPL26) pseudogene
ENST00000380433.5	MANE_select
ENST00000380419.8	MANE_select
ENST00000355029.9	MANE_select
ENST00000486354.1	neuroepithelial cell transforming gene 1
ENST00000449083.5	neuroepithelial cell transforming gene 1
ENST00000465087.1	neuroepithelial cell transforming gene 1
ENST00000484741.1	neuroepithelial cell transforming gene 1
ENST00000380332.5	MANE_select
ENST00000380332.5	calmodulin-like skin protein (CLSP)
ENST00000315238.3	MANE_select
ENST00000315238.3	calmodulin-like 3 (CLP)
ENST00000668112.1	Assembled from SLRseq reads (SRP049776)
ENST00000658565.1	Assembled from SLRseq reads (SRP049776)
ENST00000659334.1	Assembled from SLRseq reads (SRP049776)
ENST00000660861.1	Assembled from SLRseq reads (SRP049776)
ENST00000664654.1	Assembled from SLRseq reads (SRP049776)
ENST00000478294.2	putative novel transcript
ENST00000665493.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660276.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425246.2	novel transcript
ENST00000675696.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000656119.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000441526.1	ribosomal protein L23a (RPL23A) pseudogene
ENST00000493897.1	ankyrin repeat and SOCS box-containing 13
ENST00000357700.11	MANE_select
ENST00000459912.5	ankyrin repeat and SOCS box-containing 13
ENST00000479033.1	ankyrin repeat and SOCS box-containing 13
ENST00000482921.1	ankyrin repeat and SOCS box-containing 13
ENST00000477043.5	novel transcript
ENST00000473789.5	novel transcript
ENST00000496681.5	alternative 5' UTR
ENST00000480839.6	QC splicing correct
ENST00000645567.1	CAGE supported TSS
ENST00000482419.1	putative novel transcript
ENST00000463468.5	novel transcript
ENST00000487196.1	putative novel transcript
ENST00000411512.2	QC splicing correct
ENST00000411512.2	putative novel transcript
ENST00000380191.9	MANE_select
ENST00000479928.1	GDP dissociation inhibitor 2
ENST00000447751.5	GDP dissociation inhibitor 2
ENST00000456041.5	GDP dissociation inhibitor 2
ENST00000456041.5	QC splicing correct
ENST00000418688.5	GDP dissociation inhibitor 2
ENST00000418688.5	QC splicing correct
ENST00000380127.5	GDP dissociation inhibitor 2
ENST00000380094.10	MANE_select
ENST00000380094.10	alternative 3' UTR
ENST00000191063.8	NP_001009943
ENST00000492368.1	novel transcript
ENST00000362091.9	MANE_select
ENST00000362091.9	likely ortholog of mouse f-box only protein 18 (FBXO18)(FBH1,FLJ14590)
ENST00000470089.5	likely ortholog of mouse f-box only protein 18 (FBXO18)(FBH1,FLJ14590)
ENST00000462507.1	likely ortholog of mouse f-box only protein 18 (FBXO18)(FBH1,FLJ14590)
ENST00000379999.6	likely ortholog of mouse f-box only protein 18 (FBXO18)(FBH1,FLJ14590)
ENST00000469009.5	likely ortholog of mouse f-box only protein 18 (FBXO18)(FBH1,FLJ14590)
ENST00000494526.1	likely ortholog of mouse f-box only protein 18 (FBXO18)(FBH1,FLJ14590)
ENST00000460453.1	likely ortholog of mouse f-box only protein 18 (FBXO18)(FBH1,FLJ14590)
ENST00000489042.1	likely ortholog of mouse f-box only protein 18 (FBXO18)(FBH1,FLJ14590)
ENST00000475867.5	likely ortholog of mouse f-box only protein 18 (FBXO18)(FBH1,FLJ14590)
ENST00000461504.5	likely ortholog of mouse f-box only protein 18 (FBXO18)(FBH1,FLJ14590)
ENST00000485290.1	likely ortholog of mouse f-box only protein 18 (FBXO18)(FBH1,FLJ14590)
ENST00000496013.5	likely ortholog of mouse f-box only protein 18 (FBXO18)(FBH1,FLJ14590)
ENST00000479433.5	likely ortholog of mouse f-box only protein 18 (FBXO18)(FBH1,FLJ14590)
ENST00000470353.1	likely ortholog of mouse f-box only protein 18 (FBXO18)(FBH1,FLJ14590)
ENST00000481029.1	likely ortholog of mouse f-box only protein 18 (FBXO18)(FBH1,FLJ14590)
ENST00000397264.4	putative novel transcript
ENST00000448685.1	putative novel transcript
ENST00000454321.1	putative novel transcript
ENST00000435171.6	QC splicing correct
ENST00000379977.8	MANE_select
ENST00000532039.5	QC splicing correct
ENST00000379959.8	MANE_select
ENST00000649218.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000440436.1	QC splicing correct
ENST00000397237.2	ribosomal protein L32 (RPL32) pseudogene
ENST00000379888.9	MANE_select
ENST00000379888.9	QC splicing correct
ENST00000437845.6	QC splicing correct
ENST00000432931.5	alternative 5' UTR
ENST00000432931.5	splicing factor (45kD) (SPF45)(MGC14439)
ENST00000418631.5	alternative 5' UTR
ENST00000418631.5	splicing factor (45kD) (SPF45)(MGC14439)
ENST00000467214.1	splicing factor (45kD) (SPF45)(MGC14439)
ENST00000447032.1	splicing factor (45kD) (SPF45)(MGC14439)
ENST00000481147.1	splicing factor (45kD) (SPF45)(MGC14439)
ENST00000476706.5	splicing factor (45kD) (SPF45)(MGC14439)
ENST00000465906.5	splicing factor (45kD) (SPF45)(MGC14439)
ENST00000467080.1	splicing factor (45kD) (SPF45)(MGC14439)
ENST00000496762.1	splicing factor (45kD) (SPF45)(MGC14439)
ENST00000461744.5	QC splicing correct
ENST00000467491.5	QC splicing correct
ENST00000490474.5	QC splicing correct
ENST00000477914.5	QC splicing correct
ENST00000360521.7	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 (PFKFB3)(IPFK2)
ENST00000379775.9	MANE_select
ENST00000427630.1	putative novel transcript
ENST00000659311.1	Assembled from SLRseq reads (SRP049776)
ENST00000670683.1	Assembled from SLRseq reads (SRP049776)
ENST00000670319.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664595.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660179.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440192.1	syndecan binding protein (syntenin) (SDCBP) pseudogene
ENST00000263125.10	MANE_select
ENST00000263125.10	protein kinase C, theta (PRKCQ)
ENST00000445427.1	novel transcript
ENST00000455810.5	novel transcript
ENST00000663449.1	Assembled from SLRseq reads (SRP049776)
ENST00000667809.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000613651.2	Assembled from SLRseq reads (SRP049776)
ENST00000667092.1	Assembled from SLRseq reads (SRP049776)
ENST00000414894.1	putative novel transcript
ENST00000449648.1	putative novel transcript
ENST00000615210.5	Assembled from SLRseq reads (SRP049776)
ENST00000448835.2	novel transcript
ENST00000665216.1	Assembled from SLRseq reads (SRP049776)
ENST00000666057.1	Assembled from SLRseq reads (SRP049776)
ENST00000669799.1	Assembled from SLRseq reads (SRP049776)
ENST00000664549.1	Assembled from SLRseq reads (SRP049776)
ENST00000654694.1	Assembled from SLRseq reads (SRP049776)
ENST00000652889.1	Assembled from SLRseq reads (SRP049776)
ENST00000668294.1	Assembled from SLRseq reads (SRP049776)
ENST00000457632.1	putative novel transcript
ENST00000654037.1	Assembled from SLRseq reads (SRP049776)
ENST00000668409.1	Assembled from SLRseq reads (SRP049776)
ENST00000666104.1	Assembled from SLRseq reads (SRP049776)
ENST00000420049.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420049.2	putative novel transcript
ENST00000361972.8	novel protein (KIAA1617)
ENST00000673876.1	NAGNAG splice site
ENST00000379713.7	novel protein (KIAA1617)
ENST00000421389.1	cytochrome c oxidase subunit VIc (COX6) pseudogene
ENST00000660269.1	Assembled from SLRseq reads (SRP049776)
ENST00000670632.1	Assembled from SLRseq reads (SRP049776)
ENST00000420395.1	novel transcript
ENST00000414631.1	putative novel transcript
ENST00000397146.7	MANE_select
ENST00000461751.1	novel protein (MGC10848)
ENST00000358415.9	MANE_select
ENST00000379587.4	QC splicing correct
ENST00000379562.9	MANE_select
ENST00000498098.1	QC splicing correct
ENST00000463666.5	KIN, antigenic determinant of recA protein homolog (mouse) (KIN)(BTCD,KIN17)
ENST00000471320.5	KIN, antigenic determinant of recA protein homolog (mouse) (KIN)(BTCD,KIN17)
ENST00000460089.1	KIN, antigenic determinant of recA protein homolog (mouse) (KIN)(BTCD,KIN17)
ENST00000493053.5	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
ENST00000462760.1	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
ENST00000460362.5	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
ENST00000460362.5	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 (ATP5C1)(ATP5C,ATP5CL1)
ENST00000356708.12	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
ENST00000356708.12	MANE_select
ENST00000335698.4	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
ENST00000465936.5	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
ENST00000460820.6	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
ENST00000472202.1	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
ENST00000473809.5	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
ENST00000480528.1	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
ENST00000344293.6	MANE_select
ENST00000344293.6	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa (TAF3)(TAF140,TAFII140)
ENST00000440219.1	mitochondrial ribosomal protein L13 (MRPL13) pseudogene
ENST00000481743.2	alternative 5' UTR
ENST00000379328.9	LR annotation
ENST00000379328.9	MANE_select
ENST00000346208.4	NAGNAG splice site
ENST00000461472.1	GATA binding protein 3 (GATA3)(HDR,MGC5445)
ENST00000417359.1	QC splicing correct
ENST00000458727.1	QC splicing correct
ENST00000418270.1	putative novel transcript
ENST00000451976.1	novel pseudogene (FLJ34719, FLJ14936)
ENST00000454056.5	novel transcript
ENST00000428165.1	novel transcript
ENST00000657469.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413941.1	putative novel transcript
ENST00000413286.1	novel transcript
ENST00000451609.1	keratin pseudogene
ENST00000425516.1	novel pseudogene (FLJ20420)
ENST00000447297.1	novel transcript
ENST00000456526.1	putative novel transcript
ENST00000458168.1	putative novel transcript
ENST00000658214.1	Assembled from SLRseq reads (SRP049776)
ENST00000661683.1	Assembled from SLRseq reads (SRP049776)
ENST00000450068.1	heat shock protein pseudogene
ENST00000659451.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647601.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000429539.1	novel transcript
ENST00000664907.1	Assembled from SLRseq reads (SRP049776)
ENST00000455871.1	putative novel transcript
ENST00000670890.1	Assembled from SLRseq reads (SRP049776)
ENST00000665201.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668678.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000602311.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661560.1	Assembled from SLRseq reads (SRP049776)
ENST00000653741.1	Assembled from SLRseq reads (SRP049776)
ENST00000655007.1	Assembled from SLRseq reads (SRP049776)
ENST00000448495.1	ORM1-like (S. cerevisiae) pseudogene
ENST00000634899.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665724.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656654.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653216.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000446372.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667544.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000602763.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660024.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000415590.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663743.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652890.1	Assembled from SLRseq reads (SRP049776)
ENST00000638035.1	alternative 5' UTR
ENST00000636488.1	alternative 3' UTR
ENST00000631460.1	alternative 3' UTR
ENST00000633077.1	NP_006552.3
ENST00000632728.1	alternative 5' UTR
ENST00000399850.7	alternative 3' UTR
ENST00000669108.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666257.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664101.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670911.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661059.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668056.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665722.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665878.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670712.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666012.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000658098.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000428520.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000428520.7	QC splicing correct
ENST00000663943.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666413.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658300.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666118.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000618245.5	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655059.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658432.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662261.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653692.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654254.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667647.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653875.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653875.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000667727.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670352.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661323.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000628644.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660131.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661489.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659787.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653474.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655878.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000635670.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000635670.2	QC splicing correct
ENST00000667690.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000596092.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000596092.6	novel transcript
ENST00000655018.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000619619.5	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660696.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666362.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656110.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000441855.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662523.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653187.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663230.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661730.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000615861.5	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658760.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000598573.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000622401.5	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000420825.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420825.2	novel transcript
ENST00000437825.1	putative novel transcript
ENST00000428853.2	non canonical TEC
ENST00000661890.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661681.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432370.3	novel transcript
ENST00000669017.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658499.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652917.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663606.1	Assembled from SLRseq reads (SRP049776)
ENST00000667228.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000635624.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653050.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671624.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664601.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666482.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420634.1	QC splicing correct
ENST00000417273.1	putative novel transcript
ENST00000443016.1	QC splicing correct
ENST00000496136.5	novel transcript
ENST00000379215.9	MANE_select
ENST00000379215.9	novel protein (FLJ20909)
ENST00000420401.5	novel protein
ENST00000422887.1	novel protein
ENST00000495787.1	novel transcript
ENST00000474155.1	novel transcript
ENST00000277570.10	MANE_select
ENST00000444604.1	novel protein
ENST00000379200.1	novel protein (MGC35403)
ENST00000445498.5	novel transcript (LOC219731)
ENST00000453242.1	novel transcript
ENST00000356352.6	UPF2 regulator of nonsense transcripts homolog (yeast)
ENST00000356352.6	alternative 5' UTR
ENST00000356352.6	alternatively spliced 5' UTR, shares CDS with Em:AC073160.1.2
ENST00000356352.6	alternatively spliced 5' UTR, shares CDS with bA401F24.4.2
ENST00000356352.6	alternatively spliced 5' UTR, shares CDS with bA796C22.1.2
ENST00000357604.10	MANE_select
ENST00000357604.10	UPF2 regulator of nonsense transcripts homolog (yeast)
ENST00000357604.10	alternative 5' UTR
ENST00000357604.10	alternatively spliced 5' UTR, shares CDS with Em:AC073160.1.1
ENST00000357604.10	alternatively spliced 5' UTR, shares CDS with bA401F24.4.1
ENST00000357604.10	alternatively spliced 5' UTR, shares CDS with bA796C22.1.1
ENST00000460569.1	UPF2 regulator of nonsense transcripts homolog (yeast)
ENST00000263035.9	MANE_select
ENST00000263035.9	novel protein (KIAA1630)
ENST00000437298.1	novel transcript
ENST00000437298.1	this variant and variants 3, 4 and 5 could be part of the same variant
ENST00000465617.1	novel transcript
ENST00000415935.1	novel protein
ENST00000415935.1	this variant and variants 5 and 6 could be part of the same variant
ENST00000448829.1	novel protein
ENST00000448829.1	this variant and variants 5 and 6 could be part of the same variant
ENST00000479283.1	putative novel transcript
ENST00000479283.1	this variant and variants 3, 4 and 6 could be part of the same variant
ENST00000379051.5	QC splicing correct
ENST00000441368.5	likely ortholog of mouse SEC61, alpha subunit 2 (S. cerevisiae) (SEC61A2)
ENST00000298428.14	MANE_select
ENST00000298428.14	likely ortholog of mouse SEC61, alpha subunit 2 (S. cerevisiae) (SEC61A2)
ENST00000475268.5	likely ortholog of mouse SEC61, alpha subunit 2 (S. cerevisiae) (SEC61A2)
ENST00000495368.1	likely ortholog of mouse SEC61, alpha subunit 2 (S. cerevisiae) (SEC61A2)
ENST00000304267.12	likely ortholog of mouse SEC61, alpha subunit 2 (S. cerevisiae) (SEC61A2)
ENST00000472221.5	likely ortholog of mouse SEC61, alpha subunit 2 (S. cerevisiae) (SEC61A2)
ENST00000379020.8	QC splicing correct
ENST00000379020.8	likely ortholog of mouse SEC61, alpha subunit 2 (S. cerevisiae) (SEC61A2)
ENST00000379017.7	likely ortholog of mouse SEC61, alpha subunit 2 (S. cerevisiae) (SEC61A2)
ENST00000457034.1	likely ortholog of mouse SEC61, alpha subunit 2 (S. cerevisiae) (SEC61A2)
ENST00000418772.1	QC splicing correct
ENST00000418772.1	likely ortholog of mouse SEC61, alpha subunit 2 (S. cerevisiae) (SEC61A2)
ENST00000419021.1	QC splicing correct
ENST00000419021.1	likely ortholog of mouse SEC61, alpha subunit 2 (S. cerevisiae) (SEC61A2)
ENST00000466451.1	likely ortholog of mouse SEC61, alpha subunit 2 (S. cerevisiae) (SEC61A2)
ENST00000491614.6	MANE_select
ENST00000491614.6	nudix (nucleoside diphosphate linked moiety X)-type motif 5
ENST00000378937.7	nudix (nucleoside diphosphate linked moiety X)-type motif 5
ENST00000378952.7	nudix (nucleoside diphosphate linked moiety X)-type motif 5
ENST00000476462.5	nudix (nucleoside diphosphate linked moiety X)-type motif 5
ENST00000378940.7	nudix (nucleoside diphosphate linked moiety X)-type motif 5
ENST00000378927.7	nudix (nucleoside diphosphate linked moiety X)-type motif 5
ENST00000498825.1	nudix (nucleoside diphosphate linked moiety X)-type motif 5
ENST00000444732.1	nudix (nucleoside diphosphate linked moiety X)-type motif 5
ENST00000429258.6	QC splicing correct
ENST00000429258.6	alternative 5' UTR
ENST00000281141.9	MANE_select
ENST00000421657.1	QC splicing correct
ENST00000619168.5	CamKI-like protein kinase (CKLiK) (LOC221042, LOC283070)
ENST00000619168.5	MANE_select
ENST00000487696.1	QC splicing correct
ENST00000378845.5	CamKI-like protein kinase (CKLiK)
ENST00000648650.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000649832.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000378825.5	MANE_select
ENST00000378825.5	novel protein (DKFZP761F241) (FLJ20925)
ENST00000378839.1	QC splicing correct
ENST00000441148.1	ribosomal protein L5 (RPL5) pseudogene
ENST00000263036.9	QC splicing correct
ENST00000263036.9	alternative 5' UTR
ENST00000263036.9	optineurin
ENST00000378764.6	QC splicing correct
ENST00000378764.6	optineurin
ENST00000487935.1	optineurin
ENST00000482140.5	optineurin
ENST00000378747.8	MANE_select
ENST00000378747.8	optineurin
ENST00000378757.6	optineurin
ENST00000430081.5	optineurin
ENST00000378752.7	optineurin
ENST00000378748.7	optineurin
ENST00000486862.1	optineurin
ENST00000424614.1	optineurin
ENST00000469025.1	optineurin
ENST00000456003.1	small nuclear ribonucleoprotein polypeptide G (SNRPG) pseudogene
ENST00000442321.1	pseudogene similar to part of chromodomain protein, Y chromosome, 1 (CDY1)
ENST00000442900.1	pseudogene similar to part of COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast) (COX10)
ENST00000447253.1	novel pseudogene (FLJ10648, KIAA1525)
ENST00000418616.1	ribosomal protein L36A (RPL36A) pseudogene
ENST00000378714.8	MANE_select
ENST00000378681.8	MANE_select
ENST00000378681.8	novel protein (LOC221044)
ENST00000463405.2	QC splicing correct
ENST00000463405.2	novel transcript (LOC221044)
ENST00000396913.6	NP_001032626.1
ENST00000263038.9	MANE_select
ENST00000396920.7	QC splicing correct
ENST00000453759.6	alternative 5' UTR
ENST00000479604.1	Donor site of 5th exon is 6 bases longer than object 001
ENST00000327347.10	MANE_select
ENST00000327347.10	selenophosphate synthetase (SPS)
ENST00000378614.8	QC splicing correct
ENST00000413411.5	selenophosphate synthetase (SPS)
ENST00000425947.1	selenophosphate synthetase (SPS)
ENST00000494329.1	selenophosphate synthetase (SPS)
ENST00000658137.1	Assembled from SLRseq reads (SRP049776)
ENST00000448272.1	putative novel transcript
ENST00000486542.5	QC splicing correct
ENST00000341083.7	QC splicing correct
ENST00000440282.5	novel protein (FLJ40283)
ENST00000378605.3	novel protein (FLJ40283)
ENST00000480703.1	QC splicing correct
ENST00000480703.1	novel protein (FLJ40283)
ENST00000463303.5	novel protein (FLJ40283)
ENST00000469555.1	novel protein (FLJ40283)
ENST00000649551.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000492675.1	novel protein (FLJ40283)
ENST00000466271.1	novel protein (FLJ40283)
ENST00000438431.1	putative novel transcript
ENST00000417658.5	PRP18 pre-mRNA processing factor 18 homolog (yeast)(PRPF18)(PRP18, hPrp18)
ENST00000378572.8	MANE_select
ENST00000378572.8	PRP18 pre-mRNA processing factor 18 homolog (yeast)(PRPF18)(PRP18, hPrp18)
ENST00000320054.4	PRP18 pre-mRNA processing factor 18 homolog (yeast)(PRPF18)(PRP18, hPrp18)
ENST00000445338.1	ribosomal protein L6 (RPL6) pseudogene
ENST00000440878.5	novel transcript
ENST00000437446.1	putative novel transcript
ENST00000419851.6	novel transcript
ENST00000430721.2	novel transcript
ENST00000357447.7	CCDS7101.1
ENST00000357447.7	MANE_select
ENST00000357447.7	novel protein (FLJ10210)
ENST00000475325.1	novel protein (FLJ10210)
ENST00000495956.2	novel protein (FLJ10210)
ENST00000264546.10	CAGE supported TSS
ENST00000264546.10	novel protein (FLJ10210)
ENST00000632570.1	CAGE supported TSS
ENST00000492155.5	novel protein (FLJ10210)
ENST00000342409.3	CAGE supported TSS
ENST00000342409.3	novel protein (FLJ10210)
ENST00000477221.2	novel protein (FLJ10210)
ENST00000640906.1	CAGE supported TSS
ENST00000649155.1	CAGE supported TSS
ENST00000649246.1	CAGE supported TSS
ENST00000649099.1	CAGE supported TSS
ENST00000648400.1	CAGE supported TSS
ENST00000649423.1	CAGE supported TSS
ENST00000493380.5	QC splicing correct
ENST00000475141.2	NMD likely if extended
ENST00000412388.1	putative novel transcript
ENST00000449462.1	novel transcript
ENST00000475013.1	nuclear transport factor 2 (NUTF2)(NTF2,PP15) pseudogene
ENST00000446193.1	novel transcript
ENST00000451617.1	novel transcript
ENST00000648484.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000181796.7	MANE_select
ENST00000181796.7	NP_113641.2
ENST00000468747.5	alternative 5' UTR
ENST00000378467.8	alternative 5' UTR
ENST00000378465.7	alternative 5' UTR
ENST00000378458.6	alternative 5' UTR
ENST00000478076.5	alternative 5' UTR
ENST00000378462.5	alternative 5' UTR
ENST00000496330.5	alternative 5' UTR
ENST00000479731.5	alternative 5' UTR
ENST00000468492.5	alternative 5' UTR
ENST00000452706.6	alternative 5' UTR
ENST00000489100.5	alternative 5' UTR
ENST00000494865.5	alternative 5' UTR
ENST00000475786.5	alternative 5' UTR
ENST00000488576.5	alternative 5' UTR
ENST00000442012.5	alternative 5' UTR
ENST00000482277.5	alternative 5' UTR
ENST00000472095.5	alternative 5' UTR
ENST00000491458.1	novel protein (MGC11034)
ENST00000647862.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000443282.1	novel transcript
ENST00000456871.1	laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1) pseudogene
ENST00000465530.2	MANE_select
ENST00000465530.2	novel protein similar to ARMET protein precursor (Arginine-rich protein)(LOC283071). variant 2
ENST00000378442.5	novel protein similar to ARMET protein precursor (Arginine-rich protein)(LOC283071). variant 1
ENST00000378441.6	novel protein similar to ARMET protein precursor (Arginine-rich protein)(LOC283071). variant 3
ENST00000467405.1	novel protein similar to ARMET protein precursor (Arginine-rich protein)(LOC283071). variant 5
ENST00000466269.1	novel protein similar to ARMET protein precursor (Arginine-rich protein)(LOC283071). variant 4
ENST00000640019.3	MANE_select
ENST00000378372.8	MANE_select
ENST00000441647.1	likely ortholog of mouse heat shock protein, 70 kDa 4 (HSP70-4)
ENST00000470430.1	likely ortholog of mouse heat shock protein, 70 kDa 4 (HSP70-4)
ENST00000378331.5	suppressor of variegation 3-9 (Drosophila) homolog 2; hypothetical protein FLJ23414 (SUV39H2)(FLJ23414)
ENST00000433779.5	suppressor of variegation 3-9 (Drosophila) homolog 2; hypothetical protein FLJ23414 (SUV39H2)(FLJ23414)
ENST00000378325.7	suppressor of variegation 3-9 (Drosophila) homolog 2; hypothetical protein FLJ23414 (SUV39H2)(FLJ23414)
ENST00000354919.11	MANE_select
ENST00000354919.11	suppressor of variegation 3-9 (Drosophila) homolog 2; hypothetical protein FLJ23414 (SUV39H2)(FLJ23414)
ENST00000313519.9	suppressor of variegation 3-9 (Drosophila) homolog 2; hypothetical protein FLJ23414 (SUV39H2)(FLJ23414)
ENST00000420416.1	QC splicing correct
ENST00000412254.1	suppressor of variegation 3-9 (Drosophila) homolog 2; hypothetical protein FLJ23414 (SUV39H2)(FLJ23414)
ENST00000358298.6	QC splicing correct
ENST00000378278.7	DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) (DCLRE1C)
ENST00000378278.7	MANE_select
ENST00000378246.6	DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) (DCLRE1C)
ENST00000378246.6	alternative 5' UTR
ENST00000378246.6	alternative 5' UTR; shares CDS with bA2K17.2.2, bA2K17.2.3, bA2K17.2.12
ENST00000357717.6	DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) (DCLRE1C)
ENST00000357717.6	alternative 5' UTR
ENST00000357717.6	alternative 5' UTR; shares CDS with bA2K17.2.1, bA2K17.2.3, bA2K17.2.12
ENST00000378249.5	DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) (DCLRE1C)
ENST00000378249.5	alternative 5' UTR
ENST00000378249.5	alternative 5' UTR; shares CDS with bA2K17.2.1, bA2K17.2.2, bA2K17.2.12
ENST00000396817.6	DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) (DCLRE1C)
ENST00000396817.6	alternative 5' UTR
ENST00000396817.6	alternative 5' UTR; shares CDS with bA2K17.2.5, bA2K17.2.6, bA2K17.2.7, bA2K17.2.13
ENST00000378255.5	DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) (DCLRE1C)
ENST00000378255.5	alternative 5' UTR
ENST00000378255.5	alternative 5' UTR; shares CDS with bA2K17.2.4, bA2K17.2.6, bA2K17.2.7, bA2K17.2.13
ENST00000378254.5	DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) (DCLRE1C)
ENST00000378254.5	alternative 5' UTR
ENST00000378254.5	alternative 5' UTR; shares CDS with bA2K17.2.4, bA2K17.2.5, bA2K17.2.7, bA2K17.2.13
ENST00000378258.5	DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) (DCLRE1C)
ENST00000378258.5	alternative 5' UTR
ENST00000378258.5	alternative 5' UTR; shares CDS with bA2K17.2.4, bA2K17.2.5, bA2K17.2.6, bA2K17.2.13
ENST00000378242.1	DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) (DCLRE1C)
ENST00000492201.5	DNA cross-link repair 1C (PSO2 homolog, S.cerevisiae) (DCLRE1C)
ENST00000489845.1	DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) (DCLRE1C)
ENST00000489161.1	DNA cross-link repair 1C (PSO2 homolog, S.cerevisiae) (DCLRE1C)
ENST00000418843.5	DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) (DCLRE1C)
ENST00000378241.5	DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) (DCLRE1C)
ENST00000378241.5	alternative 5' UTR
ENST00000378241.5	alternative 5' UTR; shares CDS with bA2K17.2.4, bA2K17.2.5, bA2K17.2.6, bA2K17.2.7
ENST00000456122.1	DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) (DCLRE1C)
ENST00000456122.1	alternative 5' UTR
ENST00000456122.1	alternative 5' UTR; shares CDS with bA2K17.2.1, bA2K17.2.2, bA2K17.2.3
ENST00000407572.6	MANE_select
ENST00000407572.6	genebuild_only_MANE
ENST00000477770.5	novel protein similar to mouse Meig1 (Meg1)(meiosis expressed gene 1)
ENST00000496225.2	QC splicing correct
ENST00000467536.1	QC splicing correct
ENST00000428897.5	novel thioesterase domain containing protein (FLJ11106)
ENST00000413672.5	novel thioesterase domain containing protein (FLJ11106)
ENST00000429028.5	QC splicing correct
ENST00000429028.5	alternative 5' UTR
ENST00000429028.5	novel thioesterase domain containing protein (FLJ11106)
ENST00000378225.5	novel thioesterase domain containing protein (FLJ11106)
ENST00000378228.8	MANE_select
ENST00000378228.8	novel thioesterase domain containing protein (FLJ11106)
ENST00000378217.3	novel thioesterase domain containing protein (FLJ11106)
ENST00000493912.1	novel thioesterase domain containing protein (FLJ11106)
ENST00000485251.1	novel thioesterase domain containing protein (FLJ11106)
ENST00000356189.6	FLJ38219
ENST00000356189.6	MANE_select
ENST00000452090.1	pseudogene similar to part of glyceraldehyde-3-phosphate dehydrogenase (GAPD)(G3PD,GAPDH)
ENST00000624760.1	novel protein
ENST00000378203.5	alternative 5' UTR
ENST00000378203.5	alternative 5' UTR; shares CDS with bA455B2.5.1, bA455B2.5.2, bA455B2.5.5
ENST00000378203.5	ribonuclease P (38kD) (RPP38)
ENST00000451677.1	QC splicing correct
ENST00000378202.5	alternative 5' UTR
ENST00000378202.5	alternative 5' UTR; shares CDS with bA455B2.5.1, bA455B2.5.3, bA455B2.5.5
ENST00000378202.5	ribonuclease P (38kD) (RPP38)
ENST00000378197.5	MANE_select
ENST00000378197.5	alternative 5' UTR
ENST00000378197.5	alternative 5' UTR; shares CDS with bA455B2.5.2, bA455B2.5.3, bA455B2.5.5
ENST00000378197.5	ribonuclease P (38kD) (RPP38)
ENST00000441850.1	alternative 5' UTR
ENST00000441850.1	alternative 5' UTR; shares CDS with bA455B2.5.1, bA455B2.5.2, bA455B2.5.3
ENST00000441850.1	ribonuclease P (38kD) (RPP38)
ENST00000466201.1	QC splicing correct
ENST00000378165.9	MANE_select
ENST00000378165.9	N-myristoyltransferase 2 (NMT2)
ENST00000486786.1	N-myristoyltransferase 2 (NMT2)
ENST00000378150.1	N-myristoyltransferase 2 (NMT2)
ENST00000478580.1	N-myristoyltransferase 2 (NMT2)
ENST00000415473.1	peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene
ENST00000450788.1	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa (NDUFA4)(MLRQ) pseudogene
ENST00000378116.9	MANE_select
ENST00000378116.9	novel protein (LOC221061)
ENST00000477161.1	novel protein (LOC221061)
ENST00000455654.1	novel protein (LOC221061)
ENST00000433455.1	putative novel transcript
ENST00000378076.4	MANE_select
ENST00000378076.4	integrin, alpha 8
ENST00000477064.1	integrin, alpha 8
ENST00000477064.1	this variant and variant .3 could be part of the same variant
ENST00000477891.1	novel transcript
ENST00000277632.8	MANE_select
ENST00000277632.8	novel protein (FLJ13397) (CARP)
ENST00000476912.1	putative novel transcript
ENST00000418767.5	novel protein
ENST00000436829.1	QC splicing correct
ENST00000436829.1	alternative 5' UTR
ENST00000436829.1	novel protein
ENST00000433300.1	ferritin, light polypeptide (FTL) pseudogene
ENST00000656914.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655950.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653570.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659592.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666333.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655111.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656314.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664373.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664373.1	novel transcript
ENST00000667599.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000434386.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668798.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654129.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652949.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417542.1	novel transcript
ENST00000378000.5	alternative 5' UTR
ENST00000535784.7	MANE_select
ENST00000535784.7	alternative 5' UTR
ENST00000485788.1	phosphotriesterase related
ENST00000298943.4	MANE_select
ENST00000666263.1	Assembled from SLRseq reads (SRP049776)
ENST00000661975.1	Assembled from SLRseq reads (SRP049776)
ENST00000655941.1	Assembled from SLRseq reads (SRP049776)
ENST00000669251.1	Assembled from SLRseq reads (SRP049776)
ENST00000377921.7	alternative 5' UTR
ENST00000345264.10	MANE_select
ENST00000655281.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000377833.10	LR annotation
ENST00000377833.10	MANE_select
ENST00000433666.5	cubilin (intrinsic factor-cobalamin receptor)
ENST00000377823.1	cubilin (intrinsic factor-cobalamin receptor)
ENST00000377799.8	MANE_select
ENST00000664157.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661048.1	Assembled from SLRseq reads (SRP049776)
ENST00000605833.1	QC splicing correct
ENST00000544301.7	MANE_select
ENST00000544301.7	alternative 5' UTR
ENST00000544301.7	this variant and variant 8 could be part of the same variant
ENST00000544301.7	vimentin
ENST00000478746.1	alternative 5' UTR
ENST00000478746.1	this variant and variant 8 could be part of the same variant
ENST00000478746.1	vimentin
ENST00000497849.1	alternative 5' UTR
ENST00000497849.1	this variant and variant 8 could be part of the same variant
ENST00000497849.1	vimentin
ENST00000224237.9	CAGE supported TSS
ENST00000224237.9	vimentin
ENST00000487938.5	vimentin
ENST00000485947.1	vimentin
ENST00000469543.5	vimentin
ENST00000421459.2	this variant and variants 4, 5 and 6 could be part of the same variant
ENST00000421459.2	vimentin
ENST00000495528.1	vimentin
ENST00000456355.1	QC splicing correct
ENST00000456355.1	novel transcript
ENST00000377602.5	MANE_select
ENST00000377602.5	likely ortholog of mouse sialyltransferase 8-VI (alpha-2, 8-sialytransferase) (ST8SIA-VI)
ENST00000440449.5	QC splicing correct
ENST00000648997.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000451190.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657045.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000438179.1	novel pseudogene (FLJ34719, FLJ14936)
ENST00000361271.8	MANE_select
ENST00000361271.8	novel protein similar to protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a (PTPLA)
ENST00000498812.5	novel transcript
ENST00000471481.1	novel transcript
ENST00000466335.1	novel transcript
ENST00000326961.6	QC splicing correct
ENST00000377524.8	MANE_select
ENST00000377524.8	signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
ENST00000445846.1	signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
ENST00000377500.1	signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
ENST00000486183.1	signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
ENST00000494250.1	signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
ENST00000445235.1	novel transcript
ENST00000377495.2	MANE_select
ENST00000377495.2	novel protein
ENST00000331429.2	novel protein similar to mannose receptor, C type 1 (MRC1)
ENST00000239761.3	mannose receptor, C type 1
ENST00000442231.1	putative novel transcript
ENST00000377374.8	QC splicing correct
ENST00000377371.3	QC splicing correct
ENST00000377371.3	novel protein
ENST00000377369.7	MANE_select
ENST00000377369.7	genebuild_only_MANE
ENST00000439319.5	novel transcript (FLJ30450)
ENST00000445287.1	novel transcript
ENST00000324631.13	MANE_select
ENST00000643096.2	CAGE supported TSS
ENST00000645287.1	CAGE supported TSS
ENST00000644004.1	CAGE supported TSS
ENST00000282343.13	calcium channel, voltage-dependent, beta 2 subunit
ENST00000396576.6	calcium channel, voltage-dependent, beta 2 subunit
ENST00000377319.8	calcium channel, voltage-dependent, beta 2 subunit
ENST00000377329.10	CAGE supported TSS
ENST00000498816.1	calcium channel, voltage-dependent, beta 2 subunit
ENST00000652391.1	CAGE supported TSS
ENST00000377315.5	CAGE supported TSS
ENST00000651330.1	LR annotation
ENST00000457058.1	QC splicing correct
ENST00000659113.1	Assembled from SLRseq reads (SRP049776)
ENST00000425669.1	QC splicing correct
ENST00000425669.1	novel transcript
ENST00000436485.1	putative novel transcript
ENST00000433526.1	putative novel transcript
ENST00000377304.7	MANE_select
ENST00000377304.7	novel protein (LOC221078) (FLJ23743)
ENST00000493816.1	novel transcript
ENST00000449529.1	putative novel transcript
ENST00000444660.1	putative novel transcript
ENST00000414939.1	novel transcript
ENST00000377275.4	ADP-ribosylation-like factor 8 (ARL8)
ENST00000377275.4	MANE_select
ENST00000654305.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654415.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427232.1	putative novel transcript
ENST00000413342.1	programmed cell death 8 (apoptosis-inducing factor) (PDCD8) pseudogene
ENST00000441557.1	pseudogene similar to part of glycogen synthase kinase 3
ENST00000454679.7	MANE_select
ENST00000377266.7	QC splicing correct
ENST00000377266.7	confirm experimentally
ENST00000377265.3	QC splicing correct
ENST00000480707.1	novel transcript
ENST00000418367.1	QC splicing correct
ENST00000434717.1	ubiquitin-conjugating enzyme pseudogene
ENST00000426818.1	putative novel transcript
ENST00000411849.1	high-mobility group nucleosome binding domain 1 (HMGN1) pseudogene
ENST00000427935.1	pseudogene similar to part of ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 (ATP2A2)
ENST00000451713.5	novel transcript
ENST00000431157.6	novel transcript
ENST00000657622.1	Assembled from SLRseq reads (SRP049776)
ENST00000423551.1	putative novel transcript
ENST00000419987.1	NADH dehydrogenase 2 (MTND2) pseudogene
ENST00000647925.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000377252.5	MANE_select
ENST00000451584.1	putative novel transcript
ENST00000659298.1	Assembled from SLRseq reads (SRP049776)
ENST00000667650.1	Assembled from SLRseq reads (SRP049776)
ENST00000457220.1	S-adenosylmethionine decarboxylase proenzyme 2 (AdoMetDC) (SamDC) pseudogene
ENST00000377122.9	MANE_select
ENST00000377122.9	nebulette (actin-binding Z-disk protein)(NEBL)
ENST00000417816.2	nebulette (actin-binding Z-disk protein)(NEBL)
ENST00000493005.5	nebulette (actin-binding Z-disk protein)(NEBL)
ENST00000492325.5	nebulette (actin-binding Z-disk protein)(NEBL)
ENST00000473616.5	nebulette (actin-binding Z-disk protein)(NEBL)
ENST00000481592.5	QC splicing correct
ENST00000460652.1	nebulette (actin-binding Z-disk protein)(NEBL)
ENST00000482754.1	nebulette (actin-binding Z-disk protein)(NEBL)
ENST00000377119.5	nebulette (actin-binding Z-disk protein)(NEBL)
ENST00000434381.1	nebulette (actin-binding Z-disk protein)(NEBL)
ENST00000674777.1	CAGE supported TSS
ENST00000529198.1	NP_001170954.1
ENST00000649437.1	NP_001010896.2
ENST00000485750.1	nebulette (actin-binding Z-disk protein)(NEBL)
ENST00000464278.1	nebulette (actin-binding Z-disk protein)(NEBL)
ENST00000412991.1	pseudogene similar to part of MTND1 (NADH dehydrogenase 1)
ENST00000452981.1	pseudogene similar to part of MTCO3 (COIII)(cytochrome c oxidase III)
ENST00000416702.1	eukaryotic translation initiation factor 4B (EIF4B)(EIF-4B) pseudogene
ENST00000425092.1	nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1)(B23,NPM,NUMATRIN) pseudogene
ENST00000439097.1	putative novel transcript
ENST00000417845.1	putative novel transcript
ENST00000457930.1	ribosomal protein L15 (RPL15) pseudogene
ENST00000415420.1	pseudogene similar to part of HOM-TES-85 (tumour antigen HOM-TES-85)
ENST00000433460.1	putative novel transcript
ENST00000454103.1	pseudogene similar to part of FLJ10581
ENST00000449193.7	MANE_select
ENST00000449193.7	QC splicing correct
ENST00000631589.1	CAGE supported TSS
ENST00000631589.1	alternative 5' UTR
ENST00000377100.8	CAGE supported TSS
ENST00000377100.8	LR annotation
ENST00000377072.8	CAGE supported TSS
ENST00000377072.8	LR annotation
ENST00000307729.12	CAGE supported TSS
ENST00000307729.12	LR annotation
ENST00000307729.12	MANE_select
ENST00000650772.1	alternative 5' UTR
ENST00000652497.1	alternative 5' UTR
ENST00000495130.5	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 (MLLT10)(AF10)
ENST00000476557.5	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 (MLLT10)(AF10)
ENST00000480415.6	NMD likely if extended
ENST00000462999.5	QC splicing correct
ENST00000430455.2	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 (MLLT10)(AF10)
ENST00000479634.1	NMD likely if extended
ENST00000438473.6	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 (MLLT10)(AF10)
ENST00000468309.1	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 (MLLT10)(AF10)
ENST00000420525.1	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 (MLLT10)(AF10)
ENST00000671070.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000453465.1	heterogeneous nuclear ribonucleoprotein R (HNRPR)(HNRNPR, hnRNP-R) pseudogene
ENST00000376980.8	DnaJ (Hsp40) homolog, subfamily C, member 1 (DNAJC1)(DNAJL1)
ENST00000376980.8	MANE_select
ENST00000483085.1	QC splicing correct
ENST00000476103.3	DnaJ (Hsp40) homolog, subfamily C, member 1 (DNAJC1)(DNAJL1)
ENST00000447548.5	DnaJ (Hsp40) homolog, subfamily C, member 1 (DNAJC1)(DNAJL1)
ENST00000447548.5	NMD likely if extended
ENST00000447548.5	QC splicing correct
ENST00000376946.2	DnaJ (Hsp40) homolog, subfamily C, member 1 (DNAJC1)(DNAJL1)
ENST00000435632.1	CGI-45 protein (CGI-45) pseudogene
ENST00000426134.1	ribosomal protein L29 (RPL29) pseudogene
ENST00000422359.2	not best-in-genome evidence
ENST00000426373.1	pseudogene similar to part of PSME2 (PA28B,REGbeta,PA28beta) (proteasome (prosome, macropain) activator subunit 2 (PA28 beta))
ENST00000665142.1	Assembled from SLRseq reads (SRP049776)
ENST00000566763.1	confirm experimentally
ENST00000419532.1	ribosomal protein L31 (RPL31) pseudogene
ENST00000376836.8	BUP protein (BUP)
ENST00000376836.8	MANE_select
ENST00000468179.6	BUP protein (BUP)
ENST00000479958.6	BUP protein (BUP)
ENST00000470045.1	BUP protein (BUP)
ENST00000456711.5	BUP protein (BUP)
ENST00000444869.5	BUP protein (BUP)
ENST00000472610.5	BUP protein (BUP)
ENST00000496071.5	BUP protein (BUP)
ENST00000463688.6	BUP protein (BUP)
ENST00000448361.5	BUP protein (BUP)
ENST00000468469.5	BUP protein (BUP)
ENST00000472673.5	BUP protein (BUP)
ENST00000483684.1	BUP protein (BUP)
ENST00000471350.1	BUP protein (BUP)
ENST00000463409.6	NMD likely if extended
ENST00000376663.8	MANE_select
ENST00000442508.5	alternative 5' UTR
ENST00000416820.5	alternative 5' UTR
ENST00000443519.1	B lymphoma Mo-MLV insertion region (mouse) (BMI1)(MGC12685)
ENST00000456231.6	sperm associated antigen 6 (SPAG6)(pf16, MGC26276, Repro-SA-1,DKFZp434I153)
ENST00000488555.5	QC splicing correct
ENST00000376624.8	MANE_select
ENST00000376624.8	sperm associated antigen 6 (SPAG6)(pf16, MGC26276, Repro-SA-1,DKFZp434I153)
ENST00000313311.10	sperm associated antigen 6 (SPAG6)(pf16, MGC26276, Repro-SA-1,DKFZp434I153)
ENST00000435326.5	QC splicing correct
ENST00000435326.5	sperm associated antigen 6 (SPAG6)(pf16, MGC26276, Repro-SA-1,DKFZp434I153)
ENST00000490361.5	sperm associated antigen 6 (SPAG6)(pf16, MGC26276, Repro-SA-1,DKFZp434I153)
ENST00000487973.1	sperm associated antigen 6 (SPAG6)(pf16, MGC26276, Repro-SA-1,DKFZp434I153)
ENST00000422675.1	QC splicing correct
ENST00000422675.1	putative novel transcript
ENST00000652874.1	Assembled from SLRseq reads (SRP049776)
ENST00000658386.1	Assembled from SLRseq reads (SRP049776)
ENST00000376573.9	MANE_select
ENST00000376573.9	phosphatidylinositol-4-phosphate 5-kinase, type II, alpha
ENST00000474335.1	QC splicing correct
ENST00000422321.5	QC splicing correct
ENST00000432610.1	phosphatidylinositol-4-phosphate 5-kinase, type II, alpha
ENST00000409983.7	QC splicing correct
ENST00000298032.10	MANE_select
ENST00000484642.5	novel transcript
ENST00000465729.1	puative novel transcript
ENST00000464017.1	novel transcript (FLJ33642)
ENST00000473919.1	putative novel transcript
ENST00000473919.1	variant 3, 4 and 5 could be part of the same variant
ENST00000655837.1	Assembled from SLRseq reads (SRP049776)
ENST00000655462.1	Assembled from SLRseq reads (SRP049776)
ENST00000662527.1	Assembled from SLRseq reads (SRP049776)
ENST00000653802.1	Assembled from SLRseq reads (SRP049776)
ENST00000376510.8	MANE_select
ENST00000376510.8	pilin-like transcription factor (PILB) (CGI-131)
ENST00000472663.1	QC splicing correct
ENST00000468633.1	pilin-like transcription factor (PILB) (CGI-131)
ENST00000415292.1	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide (YWHAZ) pseudogene
ENST00000376504.4	MANE_select
ENST00000376504.4	novel protein similar to bHLH protein Ptf1-p48 (PTF1A) (possible ortholog of rodent pancreas specific transcription factor, 1a (Ptf1a))
ENST00000640579.1	NAGNAG splice site
ENST00000640697.1	NAGNAG splice site
ENST00000636213.3	MANE_select
ENST00000376500.5	QC splicing correct
ENST00000376500.5	confirm experimentally
ENST00000649478.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000649478.1	NP_001338235.1
ENST00000323327.5	novel protein (MGC46732)
ENST00000422120.1	novel pseudogene
ENST00000443224.1	putative novel transcript
ENST00000376495.5	MANE_select
ENST00000376495.5	novel OTU-like cysteine protease domain containing protein (LOC220213)
ENST00000668836.1	Assembled from SLRseq reads (SRP049776)
ENST00000669232.1	Assembled from RACEseq reads
ENST00000376462.5	QC splicing correct
ENST00000481700.1	QC splicing correct
ENST00000636305.1	CAGE supported TSS
ENST00000376456.8	FLJ33823
ENST00000376454.8	DKFZp451I248
ENST00000376454.8	MANE_select
ENST00000438429.5	FLJ39127
ENST00000422734.1	mitotic phosphoprotein 44 (LOC129401) pseudogene
ENST00000664888.1	Assembled from SLRseq reads (SRP049776)
ENST00000680286.1	CAGE supported TSS
ENST00000396432.7	MANE_select
ENST00000396432.7	NP_065875.3
ENST00000636789.1	CAGE supported TSS
ENST00000636789.1	NMD exception
ENST00000418325.1	Rho-GTPase activating protein 10 (ARHGAP10)
ENST00000446003.5	alternative 5' UTR
ENST00000649039.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000320152.11	MANE_select
ENST00000376378.5	HHGP protein (HHGP)
ENST00000376376.3	HHGP protein (HHGP)
ENST00000446973.1	pseudogene similar to part of NADH dehydrogenase 6 (MTND6)
ENST00000648191.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000496261.6	QC splicing correct
ENST00000331161.9	MANE_select
ENST00000331161.9	novel protein similar to secreted frizzled-related protein 4 (FLJ37702) variant 2; alternatively spliced in 3' UTR
ENST00000376363.5	novel protein similar to secreted frizzled-related protein 4 (FLJ37702)
ENST00000483339.2	novel protein similar to secreted frizzled-related protein 4 (FLJ37702)
ENST00000376356.5	MANE_select
ENST00000524413.5	alternative 5' UTR
ENST00000449643.1	novel transcript (FLJ37439)
ENST00000650135.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000376351.4	MANE_select
ENST00000376351.4	novel protein (contains KIAA1136 and FLJ37801)
ENST00000482641.2	QC splicing correct
ENST00000490549.1	novel transcript
ENST00000423883.1	protein x 0004 (MGC14560) pseudogene
ENST00000671596.1	Assembled from SLRseq reads (SRP049776)
ENST00000656265.1	Assembled from SLRseq reads (SRP049776)
ENST00000655478.1	Assembled from SLRseq reads (SRP049776)
ENST00000669089.1	Assembled from SLRseq reads (SRP049776)
ENST00000655020.1	Assembled from SLRseq reads (SRP049776)
ENST00000663043.1	Assembled from SLRseq reads (SRP049776)
ENST00000648557.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000668934.1	Assembled from SLRseq reads (SRP049776)
ENST00000658893.1	Assembled from SLRseq reads (SRP049776)
ENST00000662090.1	Assembled from SLRseq reads (SRP049776)
ENST00000655854.1	Assembled from SLRseq reads (SRP049776)
ENST00000655555.1	Assembled from SLRseq reads (SRP049776)
ENST00000659066.1	Assembled from SLRseq reads (SRP049776)
ENST00000654120.1	Assembled from SLRseq reads (SRP049776)
ENST00000653175.1	Assembled from SLRseq reads (SRP049776)
ENST00000666205.1	Assembled from SLRseq reads (SRP049776)
ENST00000655911.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000605318.1	weak homology
ENST00000452911.1	novel transcript
ENST00000642920.2	LR annotation
ENST00000642920.2	MANE_select
ENST00000259271.7	alternative 3' UTR
ENST00000259271.7	alternatively spliced 3' UTR; shares CDS with bA420F12.1.1
ENST00000259271.7	glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
ENST00000428517.2	glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
ENST00000376261.8	MANE_select
ENST00000376261.8	alternative 3' UTR
ENST00000376261.8	alternatively spliced 3' UTR; shares CDS with bA420F12.1.2
ENST00000376261.8	glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
ENST00000648567.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000376248.1	glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
ENST00000376236.9	MANE_select
ENST00000376236.9	amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein
ENST00000356785.4	amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein
ENST00000493857.1	amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein
ENST00000455612.1	putative novel transcript
ENST00000412114.2	novel transcript (LOC143107)
ENST00000454991.1	putative novel transcript
ENST00000423917.5	novel transcript
ENST00000413288.1	novel transcript
ENST00000446557.1	QC splicing correct
ENST00000376215.10	MANE_select
ENST00000376215.10	this CDS differs from the published sequence.
ENST00000376215.10	trans-prenyltransferase (TPT)
ENST00000473224.1	trans-prenyltransferase (TPT)
ENST00000491711.5	trans-prenyltransferase (TPT)
ENST00000470978.1	trans-prenyltransferase (TPT)
ENST00000449300.1	heat shock protein pseudogene
ENST00000458171.1	QC splicing correct
ENST00000376170.8	spectrin SH3 domain binding protein 1
ENST00000376142.6	spectrin SH3 domain binding protein 1
ENST00000359188.8	spectrin SH3 domain binding protein 1
ENST00000376139.6	spectrin SH3 domain binding protein 1
ENST00000376160.5	spectrin SH3 domain binding protein 1
ENST00000376166.5	spectrin SH3 domain binding protein 1
ENST00000376138.7	spectrin SH3 domain binding protein 1
ENST00000376140.4	MANE_select
ENST00000376140.4	spectrin SH3 domain binding protein 1
ENST00000473481.1	spectrin SH3 domain binding protein 1
ENST00000638416.1	putative novel transcript
ENST00000639963.1	novel transcript (LOC119151) (FLJ40086)
ENST00000640121.1	novel transcript
ENST00000445828.5	QC splicing correct
ENST00000376087.5	MANE_select
ENST00000376087.5	novel protein (KIAA1074)
ENST00000436985.7	NAGNAG splice site
ENST00000676420.1	NAGNAG splice site
ENST00000490015.1	novel transcript
ENST00000675187.1	NAGNAG splice site
ENST00000675846.1	NAGNAG splice site
ENST00000473304.1	novel transcript
ENST00000466890.1	novel transcript
ENST00000376016.8	MANE_select
ENST00000376016.8	YME1-like 1 (S. cerevisiae)
ENST00000326799.7	YME1-like 1 (S. cerevisiae)
ENST00000463270.1	YME1-like 1 (S. cerevisiae)
ENST00000491542.6	QC splicing correct
ENST00000427324.5	YME1-like 1 (S. cerevisiae)
ENST00000396296.7	YME1-like 1 (S. cerevisiae)
ENST00000477432.1	YME1-like 1 (S. cerevisiae)
ENST00000375946.8	novel protein (FLJ14813)
ENST00000375940.9	CAGE supported TSS
ENST00000375940.9	MANE_select
ENST00000375940.9	novel protein
ENST00000342386.10	CAGE supported TSS
ENST00000342386.10	QC splicing correct
ENST00000477034.2	novel transcript
ENST00000396271.8	MANE_select
ENST00000396271.8	endozepine-related protein precursor (DKFZp434A2417)
ENST00000375901.5	endozepine-related protein precursor (DKFZp434A2417) (KIAA1996)
ENST00000375905.8	endozepine-related protein precursor (DKFZp434A2417) (FLJ32907)
ENST00000679293.1	CAGE supported TSS
ENST00000375888.5	endozepine-related protein precursor (DKFZp434A2417)
ENST00000476758.1	endozepine-related protein precursor (DKFZp434A2417)
ENST00000426079.5	endozepine-related protein precursor (DKFZp434A2417)
ENST00000412279.1	endozepine-related protein precursor (DKFZp434A2417)
ENST00000422707.1	pseudogene similar to part of breast cancer antigen NY-BR-1 (NY-BR-1)
ENST00000445714.1	novel pseudogene
ENST00000642324.1	rs2505323
ENST00000356940.11	MANE_select
ENST00000356940.11	RAB18, member RAS oncogene family (RAB18)
ENST00000375802.7	RAB18, member RAS oncogene family (RAB18)
ENST00000465772.5	RAB18, member RAS oncogene family (RAB18)
ENST00000484281.1	RAB18, member RAS oncogene family (RAB18)
ENST00000423465.1	RAB18, member RAS oncogene family (RAB18)
ENST00000649291.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000419761.6	MANE_select
ENST00000419761.6	genebuild_only_MANE
ENST00000561227.1	QC splicing correct
ENST00000561227.1	alternative 5' UTR
ENST00000412244.1	QC splicing correct
ENST00000673384.1	CAGE supported TSS
ENST00000481659.1	putative novel transcript
ENST00000672841.1	CAGE supported TSS
ENST00000305242.10	LR annotation
ENST00000305242.10	MANE_select
ENST00000467083.1	putative novel transcript
ENST00000672877.1	CAGE supported TSS
ENST00000673439.1	alternative 5' UTR
ENST00000480504.1	CAGE supported TSS
ENST00000434029.1	NMD likely if extended
ENST00000673512.1	CAGE supported TSS
ENST00000486279.2	QC splicing correct
ENST00000486279.2	alternative 5' UTR
ENST00000454114.1	ribosomal protein L36a-like (RPL36AL) pseudogene
ENST00000425137.1	novel transcript
ENST00000417885.1	mitochondrial ribosomal protein S21 (MRPS21)(MDS016, RPMS21, MRP-S21) pseudogene
ENST00000375732.5	novel protein (FLJ32798)
ENST00000496637.6	QC splicing correct
ENST00000496637.6	novel transcript
ENST00000375719.7	novel protein
ENST00000441595.2	not best-in-genome evidence
ENST00000481244.5	novel transcript
ENST00000474731.1	novel transcript
ENST00000474682.1	putative novel transcript
ENST00000663599.1	Assembled from SLRseq reads (SRP049776)
ENST00000435701.1	zinc finger protein pseudogene
ENST00000421132.1	QC splicing correct
ENST00000426103.1	laminin receptor 1 (ribosomal protein SA, 67kDa)(LAMR1) pseudogene
ENST00000528337.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664327.1	Assembled from SLRseq reads (SRP049776)
ENST00000428935.6	non canonical TEC
ENST00000651598.1	non canonical conserved
ENST00000526722.1	alternative 5' UTR
ENST00000375646.5	QC splicing correct
ENST00000354911.9	MANE_select
ENST00000347934.8	NP_567823.1
ENST00000651885.1	non canonical conserved
ENST00000679398.1	alternative 5' UTR
ENST00000424454.5	QC splicing correct
ENST00000442148.6	alternative 5' UTR
ENST00000448193.5	alternative 5' UTR
ENST00000679428.1	alternative 5' UTR
ENST00000439676.5	WW domain-containing adapter with a coiled-coil region (WAC)(PRO1741, FLJ31290, KIAA1844, MGC10753)
ENST00000456243.1	CGI-121 protein (CGI-121) pseudogene
ENST00000375533.6	MANE_select
ENST00000659813.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653558.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665621.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426922.6	putative novel transcript
ENST00000660375.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655545.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456082.1	putative novel transcript
ENST00000443246.2	putative novel transcript
ENST00000657525.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656822.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446012.1	putative novel transcript
ENST00000658979.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000480465.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000649382.2	MANE_select
ENST00000649382.2	upstream ATG
ENST00000494304.1	similar to Lysozyme C-1 (1,4-beta-N-acylmuramidase C, EC 3.2.1.17)(MGC33408)
ENST00000658254.1	Assembled from SLRseq reads (SRP049776)
ENST00000430295.5	novel transcript
ENST00000413405.5	novel transcript
ENST00000414457.5	novel transcript
ENST00000427063.6	novel transcript
ENST00000446807.5	novel transcript
ENST00000423223.5	novel transcript
ENST00000445521.5	novel transcript
ENST00000438202.5	novel transcript
ENST00000455774.1	novel transcript
ENST00000375400.7	supervillin (archvillin) (SVIL)
ENST00000674475.1	Assembled from SLRseq reads (SRP049776)
ENST00000674475.1	supervillin (archvillin) (SVIL)
ENST00000355867.8	supervillin (archvillin) (SVIL)
ENST00000460007.1	supervillin (archvillin) (SVIL)
ENST00000674242.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000482607.1	supervillin (archvillin) (SVIL)
ENST00000474106.5	supervillin (archvillin) (SVIL)
ENST00000491872.1	supervillin (archvillin) (SVIL)
ENST00000464984.1	supervillin (archvillin) (SVIL)
ENST00000674490.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000674490.1	alternative 5' UTR
ENST00000674350.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000483758.1	supervillin (archvillin) (SVIL)
ENST00000464726.2	Assembled from SLRseq reads (SRP049776)
ENST00000464726.2	supervillin (archvillin) (SVIL)
ENST00000490031.1	supervillin (archvillin) (SVIL)
ENST00000441292.1	single-stranded DNA binding protein (SSBP1)(SSBP) pseudogene
ENST00000464386.1	putative novel transcript
ENST00000375377.2	MANE_select
ENST00000375377.2	novel protein (KIAA1462)
ENST00000465712.1	novel transcript
ENST00000440791.1	eukaryotic translation elongation factor 1 alpha 1 (EEF1A1) pseudogene
ENST00000263063.9	CAGE supported TSS
ENST00000263063.9	MANE_select
ENST00000488290.5	QC splicing correct
ENST00000417581.1	novel protein
ENST00000421701.1	novel protein
ENST00000471055.1	novel transcript (FLJ40533)
ENST00000650129.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000512082.1	pseudogene similar to part of dynamin 1 (DNM1)
ENST00000340929.4	golgin pseudogene
ENST00000398317.2	MKI67 (FHA domain) interacting nucleolar phosphoprotein (MKI67IP) pseudogene
ENST00000440882.1	pseudogene similar to part of SIN3 homolog A, transcriptional regulator (yeast) (SIN3A)
ENST00000438347.1	cyclin D3 (CCND3) pseudogene
ENST00000415139.5	mitogen-activated protein kinase kinase kinase 8
ENST00000415139.5	this variant and variant 6 could be part of the same variant
ENST00000263056.6	MANE_select
ENST00000263056.6	alternative 5' UTR
ENST00000375322.2	mitogen-activated protein kinase kinase kinase 8
ENST00000413724.5	mitogen-activated protein kinase kinase kinase 8
ENST00000413724.5	this variant and variant 6 could be part of the same variant
ENST00000375321.1	alternative 5' UTR
ENST00000375321.1	alternatively spliced 5' UTR; shares CDS with bA449I17.6.1
ENST00000375321.1	mitogen-activated protein kinase kinase kinase 8
ENST00000430603.1	mitogen-activated protein kinase kinase kinase 8
ENST00000430603.1	this variant and variants 3 and 4 could be part of the same variant
ENST00000396326.2	heterogeneous nuclear ribonucleoprotein A1 (HRPA1) pseudogene
ENST00000670247.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440932.1	putative novel transcript
ENST00000426067.1	putative novel transcript
ENST00000648759.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000647634.2	MANE_select
ENST00000647634.2	upstream ATG
ENST00000450581.1	putative novel transcript
ENST00000416310.1	putative novel transcript
ENST00000538351.6	upstream uORF
ENST00000375311.1	FLJ32761
ENST00000448545.1	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 10 (RNA helicase) (DDH10) pseudogene
ENST00000658872.1	Assembled from SLRseq reads (SRP049776)
ENST00000669722.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662544.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659795.1	Assembled from SLRseq reads (SRP049776)
ENST00000656575.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000424869.6	CAGE supported TSS
ENST00000424869.6	MANE_select
ENST00000447199.1	pseudogene similar to part of serine palmitoyltransferase, long chain base subunit 1 (SPTLC1) (HSAN, HSN1, LBC1, LCB1, SPT1, SPTI)
ENST00000649682.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649682.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000666021.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652988.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420945.1	putative novel transcript
ENST00000662998.1	Assembled from SLRseq reads (SRP049776)
ENST00000414627.1	This small 19 aa match is referenced from Locuslink
ENST00000433770.1	putative novel transcript
ENST00000344936.7	MANE_select
ENST00000344936.7	Rho GTPase activating protein 12 (ARHGAP12)(FLJ10971, FLJ20737, FLJ21785)
ENST00000311380.8	Rho GTPase activating protein 12 (ARHGAP12)(FLJ10971, FLJ20737, FLJ21785)
ENST00000375250.9	Rho GTPase activating protein 12 (ARHGAP12)(FLJ10971, FLJ20737, FLJ21785)
ENST00000492028.5	Rho GTPase activating protein 12 (ARHGAP12)(FLJ10971, FLJ20737, FLJ21785)
ENST00000497085.1	Rho GTPase activating protein 12 (ARHGAP12)(FLJ10971, FLJ20737, FLJ21785)
ENST00000493008.1	Rho GTPase activating protein 12 (ARHGAP12)(FLJ10971, FLJ20737, FLJ21785)
ENST00000497103.1	Rho GTPase activating protein 12 (ARHGAP12)(FLJ10971, FLJ20737, FLJ21785)
ENST00000454919.1	Rho GTPase activating protein 12 (ARHGAP12)(FLJ10971, FLJ20737, FLJ21785)
ENST00000450921.1	high-mobility group box 1 (HMGB1)(HMG1, HMG3, SBP-1) pseudogene
ENST00000415903.1	ribosomal protein L34 (RPL34) pseudogene
ENST00000302418.5	MANE_select
ENST00000302418.5	kinesin family member 5B (kinesin 1 (110-120kD))(KIF5B)(KNS, KINH, KNS1, UKHC, U-KHC)
ENST00000493889.1	kinesin family member 5B (kinesin 1 (110-120kD))(KIF5B)(KNS, KINH, KNS1, UKHC, U-KHC)
ENST00000446897.1	ribosomal protein S4 pseudogene
ENST00000435436.1	part of a novel pseudogene
ENST00000437408.1	pseudogene similar to part of RAB18 (RAB18, member RAS oncogene family)
ENST00000405422.2	peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene
ENST00000442520.1	ribosomal protein S24 (RPS24) pseudogene
ENST00000415731.2	QC splicing correct
ENST00000415731.2	putative novel transcript
ENST00000319778.11	CAGE supported TSS
ENST00000319778.11	LR annotation
ENST00000319778.11	MANE_select
ENST00000462470.1	not organism-supported
ENST00000419441.1	QC splicing correct
ENST00000412085.1	QC splicing correct
ENST00000417447.1	putative novel transcript
ENST00000658560.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000362006.11	alternative 5' UTR
ENST00000639453.1	novel transcript
ENST00000639453.1	variants 2 3 and 4 could be part of the same variant
ENST00000375025.10	QC splicing correct
ENST00000639290.1	QC splicing correct
ENST00000302278.8	MANE_select
ENST00000302278.8	QC splicing correct
ENST00000677999.1	alternative 5' UTR
ENST00000677310.1	alternative 5' UTR
ENST00000480226.5	alternative 5' UTR
ENST00000534049.5	alternative 5' UTR
ENST00000528877.5	alternative 5' UTR
ENST00000464001.1	integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
ENST00000472147.1	alternative 5' UTR
ENST00000414670.2	alternative 5' UTR
ENST00000432033.1	adenylate kinase 3 like 1 (AK3L1) pseudogene
ENST00000659846.1	Assembled from SLRseq reads (SRP049776)
ENST00000450890.5	novel transcript
ENST00000666298.1	Assembled from SLRseq reads (SRP049776)
ENST00000414157.1	novel transcript
ENST00000422184.1	NADH dehydrogenase subunit 4L (ND4L) pseudogene
ENST00000423444.1	pseudogene similar to part of integrin, beta 2 (antigen CD18 (p95), lymphocyte function-associated antigen 1; macrophage antigen 1 (mac-1) beta subunit) (ITGB2)
ENST00000468834.1	ribosomal protein L7a (RPL7A) pseudogene
ENST00000414308.1	putative novel transcript
ENST00000374875.5	neuropilin 1
ENST00000265371.8	alternative 5' UTR
ENST00000265371.8	neuropilin 1
ENST00000374867.7	MANE_select
ENST00000374867.7	genebuild_only_MANE
ENST00000413802.1	neuropilin 1
ENST00000418675.5	neuropilin 1
ENST00000466932.1	QC splicing correct
ENST00000466932.1	neuropilin 1
ENST00000431894.5	neuropilin 1
ENST00000374823.9	neuropilin 1
ENST00000432372.6	neuropilin 1
ENST00000455749.1	neuropilin 1
ENST00000451530.1	QC splicing correct
ENST00000654047.1	Assembled from SLRseq reads (SRP049776)
ENST00000457848.1	novel transcript
ENST00000366376.3	Assembled from SLRseq reads (SRP049776)
ENST00000366376.3	putative novel transcript
ENST00000662994.1	Assembled from SLRseq reads (SRP049776)
ENST00000664665.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658358.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669458.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661641.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000418077.1	60S ribosomal protein L23 (RPL23) pseudogene
ENST00000434552.3	QC splicing correct
ENST00000374789.8	par-3 partitioning defective 3 homolog (C.elegans)
ENST00000374788.8	MANE_select
ENST00000374788.8	par-3 partitioning defective 3 homolog (C.elegans)
ENST00000346874.9	par-3 partitioning defective 3 homolog (C.elegans)
ENST00000374794.8	par-3 partitioning defective 3 homolog (C.elegans)
ENST00000350537.9	par-3 partitioning defective 3 homolog (C.elegans)
ENST00000374790.8	par-3 partitioning defective 3 homolog (C.elegans)
ENST00000466092.1	par-3 partitioning defective 3 homolog (C.elegans)
ENST00000374776.6	par-3 partitioning defective 3 homolog (C.elegans)
ENST00000374776.6	par-3 partitioning defective 3 homolog (C.elegans), variant 1 continued from bA51B10.1.1 in Em:AL450337 continued as bA198D23.1.1 in Em:AL360233
ENST00000374773.6	par-3 partitioning defective 3 homolog (C.elegans)
ENST00000374768.1	par-3 partitioning defective 3 homolog (C.elegans)
ENST00000423418.1	transcription elongation factor B(SIII) (TCEB2) pseudogene
ENST00000411602.1	60S ribosomal protein L37 (RPL37) pseudogene
ENST00000399739.2	40S ribosomal protein S12 (RPS12) pseudogene
ENST00000446211.1	putative novel transcript
ENST00000445923.1	pseudogene similar to part of synovial sarcoma translocation, chromosome 18 protein (SS18)
ENST00000451920.2	peroxiredoxin 2 (PRDX2) pseudogene
ENST00000654061.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000635301.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000374746.5	QC splicing correct
ENST00000374746.5	cullin 2
ENST00000374749.8	MANE_select
ENST00000374749.8	alternative 5' UTR
ENST00000374748.5	alternative 5' UTR
ENST00000374754.8	QC splicing correct
ENST00000468804.5	cullin 2
ENST00000478044.1	cullin 2
ENST00000450742.5	continues from bA134A8.3.1 in Em:AL157783
ENST00000450742.5	novel transcript
ENST00000457255.1	continues from bA134A8.3.2 in Em:AL157783
ENST00000457255.1	novel transcript
ENST00000450106.1	novel transcript
ENST00000474362.5	NP_878270.1
ENST00000374721.7	QC splicing correct
ENST00000482646.5	cAMP responsive element modulator
ENST00000374726.7	NP_001872.3
ENST00000374726.7	cAMP responsive element modulator
ENST00000429130.7	QC splicing correct
ENST00000354759.7	NP_898831.1
ENST00000489321.5	alternative 5' UTR
ENST00000427847.6	alternative 5' UTR
ENST00000345491.7	NP_853549.1
ENST00000337656.8	NP_898829.1
ENST00000374734.7	NP_898830.1
ENST00000348787.6	NP_898883.1
ENST00000361599.8	NP_877572.1
ENST00000342105.7	NP_877570.1
ENST00000495301.1	alternative 5' UTR
ENST00000472813.1	cAMP responsive element modulator
ENST00000473940.5	NP_874386.1
ENST00000488328.5	NP_874387.1
ENST00000356917.9	NP_874389.1
ENST00000488741.5	NP_874392.1
ENST00000474931.5	NP_874390.1
ENST00000344351.5	NP_874391.1
ENST00000490511.1	NP_874393.1
ENST00000438388.1	vacuolar ATPase subunit (ATP6V1G2) pseudogene
ENST00000439198.1	putative novel transcript
ENST00000490012.6	alternative 5' UTR
ENST00000374704.8	MANE_select
ENST00000374704.8	novel transcript
ENST00000492478.5	novel transcript
ENST00000470025.1	novel transcript
ENST00000465416.5	novel transcript
ENST00000497692.1	novel transcript
ENST00000659251.1	Assembled from SLRseq reads (SRP049776)
ENST00000659071.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000321660.2	MANE_select
ENST00000321660.2	connexin40.1
ENST00000374694.3	CAGE supported TSS
ENST00000374694.3	MANE_select
ENST00000374694.3	frizzled homolog 8 (Drosophila)
ENST00000668682.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425095.1	ribosomal protein L7 (RPL7) pseudogene
ENST00000442783.1	putative novel transcript
ENST00000412439.1	putative novel transcript
ENST00000418405.1	NADH dehydrogenase 5 (MTND5) pseudogene
ENST00000447010.1	pseudogene similar to part of NADH dehydrogenase 4 (MTND4)
ENST00000426283.5	QC splicing correct
ENST00000418875.1	QC splicing correct
ENST00000440465.1	novel protein similar to Pre-B cell enhancing factor (PBEF) (LOC283016)
ENST00000440465.1	probable pseudogene
ENST00000457804.1	putative novel transcript
ENST00000437526.1	pseudogene similar to MAP kinase-interacting serine/threonine kinase 1 (MKNK1)
ENST00000431356.1	ADP-ribosylation factor-like 6 interacting protein (ARL6IP) pseudogene
ENST00000374660.6	NMD exception
ENST00000374660.6	PMID: 11280766. Jager et. al
ENST00000374660.6	breast cancer antigen NY-BR-1 (NY-BR-1)
ENST00000602533.6	NMD exception
ENST00000475522.1	QC splicing correct
ENST00000436077.1	novel transcript
ENST00000420453.1	pseudogene similar to part of ATP8A2 (ATPase, aminophospholipid transporter-like, Class I, type 8A, member 2)
ENST00000429536.1	vomeronasal receptor pseudogene
ENST00000425494.1	transforming, acidic coiled-coil containing protein 1 (TACC1)(Ga55, KIAA1103) pseudogene
ENST00000448191.1	mitochondrial NADH dehydrogenase 1 (MTND1) pseudogene
ENST00000544824.2	not best-in-genome evidence
ENST00000432530.1	putative novel transcript
ENST00000485560.5	QC splicing correct
ENST00000395867.8	MANE_select
ENST00000395867.8	novel Kruppel-type zinc finger protein (LOC57209)
ENST00000494133.1	QC splicing correct
ENST00000374648.7	novel Kruppel-type zinc finger protein (LOC57209)
ENST00000395873.7	alternative 5' UTR
ENST00000395873.7	novel Kruppel-type zinc finger protein (LOC57209)
ENST00000395874.2	novel Kruppel-type zinc finger protein (LOC57209)
ENST00000452497.1	zinc finger protein pseudogene
ENST00000414066.1	tousled-like kinase 1 (TLK1)(KIAA0137, PKU-BETA) pseudogene
ENST00000429214.1	QC splicing correct
ENST00000429214.1	putative novel transcript
ENST00000406795.2	pseudogene similar to part of a zinc finger protein
ENST00000432492.1	zinc finger protein pseudogene
ENST00000302609.8	MANE_select
ENST00000302609.8	zinc finger protein 25 (KOX 19)
ENST00000467975.2	QC splicing correct
ENST00000458705.6	zinc finger protein 33a (KOX 31)
ENST00000432900.7	MANE_select
ENST00000476504.5	zinc finger protein 33a (KOX 31)
ENST00000478556.1	zinc finger protein 33a (KOX 31)
ENST00000495197.1	eukaryotic translation initiation factor 3 subunit 6 interacting protein (EIF3S6IP) pseudogene
ENST00000444174.1	FXYD domain containing ion transport regulator 6 (FXYD6) pseudogene
ENST00000498773.5	zinc finger protein 37a (KOX21)
ENST00000479469.5	zinc finger protein 37a (KOX 21)
ENST00000477790.1	zinc finger protein 37a (KOX21)
ENST00000430475.1	par-3 partitioning defective 3 homolog (C.elegans) (PARD3) pseudogene
ENST00000419779.1	novel transcript
ENST00000423162.1	QC splicing correct
ENST00000450980.1	QC splicing correct
ENST00000418733.1	pseudogene similar to part of excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing) (ERCC3)
ENST00000622550.2	not best-in-genome evidence
ENST00000444451.1	capicua homolog (Drosophila) (CIC) pseudogene
ENST00000428915.6	QC splicing correct
ENST00000428915.6	not best-in-genome evidence
ENST00000429313.1	novel protein similar to ATP-binding cassette sub-family D (ALD) member 1 (ABCD1)
ENST00000428454.1	poly(A) binding protein cytoplasmic 3 (PABPC3) pseudogene
ENST00000448440.1	actin-related protein 3 homolog (yeast) (ACTR3) pseudogene
ENST00000423458.1	RING finger protein 18 (RNF18) pseudogene
ENST00000427864.1	N-acetylated alpha-linked acidic dipeptidase 2 (NAALAD2) pseudogene
ENST00000446298.1	pseudogene similar to part of kinase suppressor of ras (KSR)
ENST00000452851.1	poly(A) binding protein, cytoplasmic 1 (PABPC1) pseudogene
ENST00000650175.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000423987.2	zinc finger protein pseudogene
ENST00000637719.1	QC splicing correct
ENST00000638057.1	non canonical TEC
ENST00000638057.1	prediction only
ENST00000659650.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659650.1	Assembled from SLRseq reads (SRP049776)
ENST00000429940.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000429940.7	novel transcript (FLJ34785)
ENST00000653292.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000424751.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000424751.3	novel transcript (FLJ33470)
ENST00000670637.1	Assembled from SLRseq reads (SRP049776)
ENST00000667964.1	Assembled from SLRseq reads (SRP049776)
ENST00000670679.1	Assembled from SLRseq reads (SRP049776)
ENST00000668072.1	Assembled from SLRseq reads (SRP049776)
ENST00000662209.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452075.7	novel transcript (FLJ23327)
ENST00000462075.1	alternative 3' UTR
ENST00000462075.1	zinc finger protein 11b (KOX 2)
ENST00000486187.5	zinc finger protein 11b (KOX 2)
ENST00000465206.5	alternative 3' UTR
ENST00000465206.5	zinc finger protein 11b (KOX 2)
ENST00000359467.8	MANE_select
ENST00000476796.2	zinc finger protein 11b (KOX 2)
ENST00000493285.2	zinc finger protein 11b (KOX 2)
ENST00000486614.1	zinc finger protein 11b (KOX 2)
ENST00000649715.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000662977.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668437.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668437.1	novel transcript
ENST00000411439.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435210.1	vomeronasal receptor (V1R) pseudogene
ENST00000412710.1	cubilin (intrinsic factor-cobalamin receptor) (CUBN) pseudogene
ENST00000658232.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439913.1	novel transcript
ENST00000374518.6	MANE_select
ENST00000421320.1	putative novel transcript (FLJ36774)
ENST00000431395.1	QC splicing correct
ENST00000431395.1	novel transcript
ENST00000340058.6	LR annotation
ENST00000340058.6	NP_065681.1
ENST00000355710.8	LR annotation
ENST00000355710.8	MANE_select
ENST00000374466.4	MANE_select
ENST00000374459.5	CG4853 gene product (LOC221002)
ENST00000395810.6	CG4853 gene product (LOC221002)
ENST00000395810.6	MANE_select
ENST00000374455.2	QC splicing correct
ENST00000451438.1	novel transcript
ENST00000650340.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000476166.6	MANE_select
ENST00000480834.5	novel transcript
ENST00000479189.1	novel transcript
ENST00000357065.8	alternative 5' UTR
ENST00000357065.8	heterogeneous nuclear ribonucleoprotein F
ENST00000356053.7	alternative 5' UTR
ENST00000356053.7	heterogeneous nuclear ribonucleoprotein F
ENST00000337970.7	heterogeneous nuclear ribonucleoprotein F
ENST00000477108.5	alternative 5' UTR
ENST00000477108.5	novel transcript
ENST00000498176.1	novel transcript
ENST00000652684.1	upstream ATG
ENST00000490208.1	putative novel transcript
ENST00000451167.2	alternative 5' UTR
ENST00000421913.1	zinc finger protein pseudogene
ENST00000306006.10	zinc finger protein 239 (MOK2, HOK-2)
ENST00000374446.7	MANE_select
ENST00000491188.1	novel transcript
ENST00000667961.1	Assembled from SLRseq reads (SRP049776)
ENST00000417455.1	Adenylyl cyclase-associated protein 1 (CAP 1) pseudogene
ENST00000430885.5	QC splicing correct
ENST00000430885.5	alternative 5' UTR
ENST00000374435.3	alternative 5' UTR
ENST00000361807.8	MANE_select
ENST00000458063.1	novel transcript
ENST00000431956.1	putative novel transcript
ENST00000436649.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000374433.7	MANE_select
ENST00000374433.7	zinc finger protein 32 (KOX 30)
ENST00000485351.1	putative novel transcript
ENST00000453284.1	QC splicing correct
ENST00000418966.1	novel transcript
ENST00000418426.1	putative novel transcript
ENST00000451503.1	ubiquinol-cytochrome C reductase pseudogene
ENST00000447108.1	transcription elongation factor B (SIII) pseudogene
ENST00000423349.5	putative novel transcript
ENST00000419406.1	putative novel transcript
ENST00000659335.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666323.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666387.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664505.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000374432.4	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661424.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667243.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649239.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000669972.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652937.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649942.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000658791.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653073.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654492.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659064.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657037.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657037.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000665279.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000431737.1	novel transcript
ENST00000660203.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657471.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667451.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649397.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000654645.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438454.1	putative novel transcript
ENST00000655717.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658736.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657555.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670971.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667785.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660538.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654894.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667054.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451929.1	novel transcript (LOC283033)
ENST00000664261.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446107.1	putative novel transcript
ENST00000437014.1	putative novel transcript
ENST00000624407.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654299.1	Assembled from SLRseq reads (SRP049776)
ENST00000667479.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452578.2	putative novel transcript
ENST00000649743.1	LOC100130539
ENST00000658643.1	Assembled from SLRseq reads (SRP049776)
ENST00000664323.1	Assembled from SLRseq reads (SRP049776)
ENST00000374429.6	NP_000600.1
ENST00000395793.7	QC splicing correct
ENST00000374426.6	NP_001029058.1
ENST00000343575.10	chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1)
ENST00000392269.2	60S ribosomal protein L9 (RPL9) pseudogene
ENST00000653121.1	Assembled from RACEseq reads
ENST00000456722.1	putative novel transcript
ENST00000663870.1	Assembled from SLRseq reads (SRP049776)
ENST00000669460.1	Assembled from SLRseq reads (SRP049776)
ENST00000659078.1	Assembled from SLRseq reads (SRP049776)
ENST00000659737.1	Assembled from SLRseq reads (SRP049776)
ENST00000659915.1	Assembled from SLRseq reads (SRP049776)
ENST00000670212.1	Assembled from SLRseq reads (SRP049776)
ENST00000663109.1	Assembled from SLRseq reads (SRP049776)
ENST00000670425.1	Assembled from SLRseq reads (SRP049776)
ENST00000667765.1	Assembled from SLRseq reads (SRP049776)
ENST00000660870.1	Assembled from SLRseq reads (SRP049776)
ENST00000657040.1	Assembled from SLRseq reads (SRP049776)
ENST00000450287.2	QC splicing correct
ENST00000670801.1	Assembled from SLRseq reads (SRP049776)
ENST00000666306.1	Assembled from SLRseq reads (SRP049776)
ENST00000662041.1	Assembled from SLRseq reads (SRP049776)
ENST00000670791.1	Assembled from SLRseq reads (SRP049776)
ENST00000653578.1	Assembled from SLRseq reads (SRP049776)
ENST00000657941.1	Assembled from SLRseq reads (SRP049776)
ENST00000659921.1	Assembled from SLRseq reads (SRP049776)
ENST00000656140.1	Assembled from SLRseq reads (SRP049776)
ENST00000668436.1	Assembled from SLRseq reads (SRP049776)
ENST00000668942.1	Assembled from SLRseq reads (SRP049776)
ENST00000659185.1	Assembled from SLRseq reads (SRP049776)
ENST00000659160.1	Assembled from SLRseq reads (SRP049776)
ENST00000659046.1	Assembled from SLRseq reads (SRP049776)
ENST00000424793.1	eukaryotic translational initiation factor 2A pseudogene
ENST00000436877.2	not organism-supported
ENST00000389583.5	MANE_select
ENST00000389583.5	novel protein
ENST00000425541.2	QC splicing correct
ENST00000340258.10	AD037 protein (AD037)
ENST00000340258.10	MANE_select
ENST00000427758.5	AD037 protein (AD037)
ENST00000462822.1	AD037 protein (AD037)
ENST00000462822.1	QC splicing correct
ENST00000428466.1	AD037 protein (AD037)
ENST00000465735.5	AD037 protein (AD037)
ENST00000471941.5	AD037 protein (AD037)
ENST00000471808.1	AD037 protein (AD037)
ENST00000484477.2	AD037 protein (AD037)
ENST00000493490.1	AD037 protein (AD037)
ENST00000496638.1	putative novel transcript
ENST00000298295.4	MANE_select
ENST00000298295.4	decidual protein induced by progesterone (DEPP)
ENST00000448778.1	alternative 5' UTR
ENST00000448778.1	decidual protein induced by progesterone (DEPP
ENST00000298299.4	MANE_select
ENST00000456938.6	QC splicing correct
ENST00000608660.1	454 RNA-Seq supported
ENST00000455650.1	ribosomal protein S19 pseudogene
ENST00000661630.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000457461.1	pseudogene similar to part of cubilin (intrinsic factor-cobalamin receptor)(CUBN)
ENST00000433115.1	novel pseudogene
ENST00000444850.1	breast cancer antigen NY-BR-1 pseudogene
ENST00000422807.1	putative novel transcript
ENST00000443534.1	pseudogene similar to part of cubilin (intrinsic factor-cobalamin receptor)(CUBN)
ENST00000641209.1	dlogan
ENST00000641007.1	ENA ID EGAS00001001486
ENST00000374401.3	ENA ID EGAS00001001486
ENST00000374401.3	alternative 5' UTR
ENST00000553795.6	MANE_select
ENST00000374391.7	MANE_select
ENST00000374391.7	arachidonate 5-lipoxygenase
ENST00000483623.2	QC splicing correct
ENST00000475300.1	arachidonate 5-lipoxygenase
ENST00000493336.1	arachidonate 5-lipoxygenase
ENST00000481117.1	arachidonate 5-lipoxygenase
ENST00000498461.1	arachidonate 5-lipoxygenase
ENST00000435635.1	novel transcript
ENST00000453424.7	MANE_select
ENST00000453980.3	alternative 5' UTR
ENST00000451376.1	QC splicing correct
ENST00000344646.10	MANE_select
ENST00000374370.1	QC splicing correct
ENST00000465407.5	QC splicing correct
ENST00000495747.5	novel transcript
ENST00000497028.5	novel transcript
ENST00000454844.1	ARF GTPase-activating protein (MRIP2) pseudogene
ENST00000424552.1	novel pseudogene
ENST00000623400.4	MANE_select
ENST00000420848.3	continued as bA534N5.1.2 in Em:AL731535
ENST00000420848.3	novel protein (KIAA0592)
ENST00000485850.1	novel transcript
ENST00000374359.1	novel protein
ENST00000471102.1	novel transcript
ENST00000448048.7	QC splicing correct
ENST00000616763.5	novel transcript
ENST00000430779.6	QC splicing correct
ENST00000430779.6	novel transcript
ENST00000495243.1	novel transcript
ENST00000490752.1	novel transcript
ENST00000440803.7	QC splicing correct
ENST00000374340.3	not organism-supported
ENST00000395727.2	NP_001035851.1
ENST00000505814.1	alternative 5' UTR
ENST00000509599.1	alternative 5' UTR
ENST00000417004.1	alternative 5' UTR
ENST00000506881.1	alternative 5' UTR
ENST00000417888.1	novel protein similar to ARF GTPase-activating protein (MRIP2) (fragment)
ENST00000435321.1	pseudogene similar to part of glutamate dehydrogenase 1 (GLUD1)
ENST00000399571.2	dual specificity phosphatase 8 (DUSP8) pseudogene
ENST00000443343.1	pseudogene similar to part of cathepsin L (CTSL)
ENST00000437899.5	CAGE supported TSS
ENST00000437899.5	QC splicing correct
ENST00000437899.5	novel transcript
ENST00000608904.1	454 RNA-Seq supported
ENST00000424615.2	QC splicing correct
ENST00000609880.1	nested 454 RNA-Seq supported
ENST00000659936.1	Assembled from SLRseq reads (SRP049776)
ENST00000374321.9	MANE_select
ENST00000374328.3	QC splicing correct
ENST00000374328.3	alternative 3' UTR
ENST00000374317.1	QC splicing correct
ENST00000612632.3	alternative 5' UTR
ENST00000374312.5	MANE_select
ENST00000374312.5	Pancreatic polypeptide receptor 1
ENST00000421426.1	heterogeneous nuclear ribonucleoprotein A1 (HNRPA1) pseudogene
ENST00000481177.1	A variant has not been annotated corresponding to EST Em:BI062059.1 as this EST appears to be  transcribed from a locus on bA145E20, as such an object has been annotated at the bA145E20 locus and not here on bA144G6
ENST00000481177.1	QC splicing correct
ENST00000481177.1	novel transcript
ENST00000452267.1	novel protein
ENST00000434533.1	QC splicing correct
ENST00000399538.2	dual specificity phosphatase 8 (DUSP8) pseudogene
ENST00000423775.1	pseudogene similar to part of cathepsin L (CTSL)
ENST00000323387.5	novel pseudogene (FLJ12916) (MGC5560)
ENST00000450289.1	Ras homolog enriched in brain (RHEB) pseudogene
ENST00000399501.2	S-adenosylhomocysteine hydrolase (AHCY) pseudogene
ENST00000340243.6	novel protein similar to annexin A8 (ANXA8)
ENST00000374277.5	novel protein similar to annexin A8 (ANXA8)
ENST00000358474.5	novel protein
ENST00000490584.1	novel transcript
ENST00000379351.3	solute carrier family 9 member 3 (SLC9A3) pseudogene
ENST00000420079.2	novel protein similar to N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 (ASAH2)
ENST00000655955.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661138.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649270.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649270.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000428057.1	cathepsin pseudogene
ENST00000399452.2	dual specificity phosphatase 8 (DUSP8) pseudogene
ENST00000456732.2	KIAA0187 pseudogene
ENST00000456984.2	novel protein similar to ARF GTPase-activating protein (MRIP2)
ENST00000457620.1	novel protein
ENST00000583874.5	QC splicing correct
ENST00000585281.6	MANE_select
ENST00000585316.3	MANE_select
ENST00000584701.2	MANE_select
ENST00000581492.3	MANE_select
ENST00000580279.2	MANE_select
ENST00000374237.3	not organism-supported
ENST00000515532.1	alternative 5' UTR
ENST00000509631.1	alternative 5' UTR
ENST00000417914.1	alternative 5' UTR
ENST00000510141.1	alternative 5' UTR
ENST00000449800.1	novel transcript
ENST00000451308.1	glutamate dehydrogenase pseudogene 2
ENST00000448376.1	dual specificity phosphatase 8 (DUSP8) pseudogene
ENST00000582543.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000582543.3	QC splicing correct
ENST00000582543.3	it is best-in-genome, but not a 100% match
ENST00000670140.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656593.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000582385.2	QC splicing correct
ENST00000419427.1	novel pseudogene
ENST00000617224.3	MANE_select
ENST00000585227.6	ARF GTPase-activating protein (MRIP2) pseudogene
ENST00000602440.2	KIAA0187 pseudogene
ENST00000614090.1	QC splicing correct
ENST00000374201.8	MANE_select
ENST00000505547.1	QC splicing correct
ENST00000429307.1	putative novel transcript
ENST00000649379.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000425165.1	ribosomal protein S6 (RPS6) pseudogene
ENST00000432379.5	alternative 5' UTR
ENST00000432379.5	mitogen-activated protein kinase 8
ENST00000429041.6	mitogen-activated protein kinase 8
ENST00000374189.5	mitogen-activated protein kinase 8 (JNK1A2)
ENST00000374179.8	Extended transcript with assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000374179.8	mitogen-activated protein kinase 8 (JNK1B1)
ENST00000426557.5	alternative 5' UTR
ENST00000426557.5	mitogen-activated protein kinase 8
ENST00000476134.1	mitogen-activated protein kinase 8
ENST00000374182.7	mitogen-activated protein kinase 8 (JNK1)
ENST00000374176.8	mitogen-activated protein kinase 8 (JNK1B2)
ENST00000374174.1	NMD likely if extended
ENST00000374174.1	mitogen-activated protein kinase 8
ENST00000471272.1	mitogen-activated protein kinase 8
ENST00000469110.1	mitogen-activated protein kinase 8 (DKFZp434B231)
ENST00000482840.1	mitogen-activated protein kinase 8
ENST00000459755.1	mitogen-activated protein kinase 8 (FLJ36681)
ENST00000374170.5	QC splicing correct
ENST00000374172.5	QC splicing correct
ENST00000249601.9	MANE_select
ENST00000489984.1	QC splicing correct
ENST00000491108.1	novel transcript
ENST00000464445.1	novel transcript
ENST00000412463.1	cytochrome c oxidase subunit VIIb (COX7B) pseudogene
ENST00000440750.1	QC splicing correct
ENST00000360890.6	QC splicing correct
ENST00000374161.7	FLJ36288
ENST00000465910.5	FLJ00111
ENST00000434320.1	ribosomal protein L13a (RPL13A) pseudogene
ENST00000664118.1	Assembled from SLRseq reads (SRP049776)
ENST00000423256.1	putative novel transcript
ENST00000430438.1	novel transcript
ENST00000374160.7	QC splicing correct
ENST00000428825.8	putative novel transcript
ENST00000422966.1	novel transcript
ENST00000332853.9	MANE_select
ENST00000442525.5	novel transcript, variant 1 (FLJ35736)
ENST00000443389.5	novel transcript
ENST00000435809.1	novel transcript
ENST00000440054.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440054.2	novel transcript
ENST00000311787.6	MANE_select
ENST00000311787.6	novel protein (LOC170370)
ENST00000374156.8	QC splicing correct
ENST00000374153.7	MANE_select
ENST00000488276.1	novel transcript
ENST00000453436.5	novel protein
ENST00000374148.1	novel protein
ENST00000470884.1	novel transcript
ENST00000437677.1	putative novel transcript
ENST00000442700.1	novel transcript
ENST00000374144.8	DKFZp451F1910
ENST00000374144.8	MANE_select
ENST00000374139.8	MANE_select
ENST00000423283.1	putative novel transcript
ENST00000355832.10	MANE_select
ENST00000465653.1	excision repair cross-complementing rodent repair deficiency, complementation group 6 (CSB, CKN2, COFS, RAD26)
ENST00000465653.1	this variant and one or more of variant fragments .3.3 through .3.5 could be part of one single variant
ENST00000475116.1	excision repair cross-complementing rodent repair deficiency, complementation group 6 (CSB, CKN2, COFS, RAD26)
ENST00000475116.1	this variant and one or more of variant fragments .3.2, .3.4 and .3.5 could be part of one single variant
ENST00000479652.1	excision repair cross-complementing rodent repair deficiency, complementation group 6 (CSB, CKN2, COFS, RAD26)
ENST00000479652.1	this variant and one or more of variant fragments .3.2, .3.3 and .3.5 could be part of one single variant
ENST00000462247.1	alternative 5' UTR
ENST00000339797.5	alternative 5' UTR
ENST00000339797.5	choline acetyltransferase
ENST00000481336.5	choline acetyltransferase
ENST00000337653.7	MANE_select
ENST00000490270.1	choline acetyltransferase
ENST00000374115.5	MANE_select
ENST00000374113.3	novel protein, variant 1 (FLJ34454)
ENST00000374111.8	MANE_select
ENST00000374111.8	novel protein
ENST00000374112.7	novel protein
ENST00000374103.9	MANE_select
ENST00000374103.9	novel protein, variant 1 (FLJ10851)
ENST00000490844.1	novel transcript, variant 2 (FLJ31255)
ENST00000490844.1	this variant and one or more of variants .3.3 and .3.4 could be part of a single variant
ENST00000496884.1	novel transcript
ENST00000496884.1	this variant and one or more of variants .3.2 and .3.3 could be part of a single variant
ENST00000471460.1	novel transcript
ENST00000471460.1	this variant and one or more of variants .3.2 and .3.4 could be part of a single variant
ENST00000420752.1	pseudogene similar to part of mitogen-activated protein kinase 6 (MAPK6)
ENST00000402038.3	poly (ADP-ribose) glycohydrolase
ENST00000492350.1	poly (ADP-ribose) glycohydrolase
ENST00000492350.1	this variant and variant .1.4 could be part of a single variant
ENST00000497481.1	poly (ADP-ribose) glycohydrolase
ENST00000497481.1	this variant and variant .1.3 could be part of a single variant
ENST00000413846.1	ribosomal protein L35a (RPL35A) pseudogene
ENST00000426412.2	putative novel transcript
ENST00000484805.1	novel transcript
ENST00000482521.1	putative novel transcript
ENST00000418400.1	novel transcript
ENST00000415340.1	putative novel transcript
ENST00000404618.2	poly (ADP-ribose) glycohydrolase (PARG) pseudogene
ENST00000453154.1	ribosomal protein L35a (RPL35A) pseudogene
ENST00000449598.1	pseudogene similar to part of ral guanine nucleotide dissociation stimulator (RALGDS)
ENST00000582163.3	CAGE supported TSS
ENST00000582163.3	MANE_select
ENST00000581486.6	MANE_select
ENST00000580018.4	MANE_select
ENST00000429104.1	novel transcript
ENST00000444438.2	QC splicing correct
ENST00000650407.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000649244.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000282633.10	MANE_select
ENST00000492914.1	novel transcript
ENST00000476514.1	novel transcript
ENST00000454806.1	novel protein
ENST00000426317.1	solute carrier family 9 (sodium/hydrogen exchanger), isoform 5 (SLC9A5) pseudogene
ENST00000435916.1	dynein, cytoplasmic, intermediate polypeptide 2 (DNCI2) pseudogene
ENST00000361781.7	MANE_select
ENST00000657992.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000437213.2	putative novel transcript
ENST00000653493.1	Assembled from SLRseq reads (SRP049776)
ENST00000443374.7	Assembled from SLRseq reads (SRP049776)
ENST00000443374.7	putative novel transcript (FLJ12320)
ENST00000437111.1	novel pseudogene (FLJ10539)
ENST00000449695.1	QC splicing correct
ENST00000442076.2	novel pseudogene
ENST00000424971.1	novel pseudogene
ENST00000455321.1	protein geranylgeranyltransferase type I, beta subunit (PGGT1B) pseudogene
ENST00000671395.1	Assembled from SLRseq reads (SRP049776)
ENST00000374007.5	novel protein similar to N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 (ASAH2)
ENST00000643851.1	alternative 5' UTR
ENST00000647317.2	MANE_select
ENST00000647317.2	alternative 5' UTR
ENST00000374006.1	novel protein similar to N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 (ASAH2)
ENST00000483649.1	novel transcript
ENST00000373997.8	MANE_select
ENST00000373997.8	alternative 5' UTR
ENST00000373997.8	apobec-1 complementation factor (ACF) (ASP)
ENST00000493415.5	apobec-1 complementation factor (ACF) (ASP)
ENST00000473480.5	apobec-1 complementation factor (ACF) (ASP)
ENST00000414883.1	alternative 5' UTR
ENST00000438919.1	novel transcript
ENST00000417131.1	novel pseudogene
ENST00000401604.8	CAGE supported TSS
ENST00000401604.8	LR annotation
ENST00000373980.11	LR annotation
ENST00000373980.11	MANE_select
ENST00000672084.1	CAGE supported TSS
ENST00000343087.4	putative novel transcript
ENST00000435271.1	novel transcript
ENST00000419889.1	putative novel transcript
ENST00000412878.2	Ras suppressor protein 1 (RSU1) pseudogene
ENST00000331173.6	MANE_select
ENST00000331173.6	likely ortholog of mouse variant polyadenylation protein CSTF-64 (CSTF2T)
ENST00000452247.7	Assembled from SLRseq reads (SRP049776)
ENST00000452247.7	QC splicing correct
ENST00000657174.1	Assembled from SLRseq reads (SRP049776)
ENST00000426785.2	QC splicing correct
ENST00000649494.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000658196.1	Assembled from SLRseq reads (SRP049776)
ENST00000420193.1	novel transcript
ENST00000373970.4	MANE_select
ENST00000373970.4	dickkopf homolog 1 (Xenopus laevis)
ENST00000467359.5	dickkopf homolog 1 (Xenopus laevis)
ENST00000494277.5	dickkopf homolog 1 (Xenopus laevis)
ENST00000476752.1	dickkopf homolog 1 (Xenopus laevis)
ENST00000447680.1	ribosomal protein L31 (RPL31) pseudogene
ENST00000456373.1	protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) (PRKRIR) pseudogene
ENST00000435813.6	QC splicing correct
ENST00000422763.1	novel transcript
ENST00000647908.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000448017.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000448017.2	novel transcript
ENST00000443523.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657963.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000373968.3	mannose-binding lectin (protein C) 2, soluble (opsonic defect)
ENST00000674931.1	CAGE supported TSS
ENST00000674931.1	MANE_select
ENST00000648218.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000668157.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654808.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000444155.1	novel transcript
ENST00000442866.1	small nuclear ribonucleoprotein polypeptide E (SNRPE) pseudogene
ENST00000449272.1	QC splicing correct
ENST00000644397.2	LR annotation
ENST00000644397.2	MANE_select
ENST00000373965.6	NP_001136244.1
ENST00000373965.6	QC splicing correct
ENST00000621708.4	NP_001136243.1
ENST00000495484.5	QC splicing correct
ENST00000617271.4	NP_001136242.1
ENST00000617271.4	QC splicing correct
ENST00000409834.5	QC splicing correct
ENST00000414367.5	QC splicing correct
ENST00000613657.4	NP_001136241.1
ENST00000613657.4	QC splicing correct
ENST00000361849.7	NP_001136236.1
ENST00000361849.7	QC splicing correct
ENST00000373956.7	QC splicing correct
ENST00000373957.7	NP_001136235.1
ENST00000395430.5	NP_001136238.1
ENST00000395430.5	QC splicing correct
ENST00000395433.5	NP_001136245.1
ENST00000395433.5	QC splicing correct
ENST00000437009.5	NP_001136237.1
ENST00000448885.5	alternative 3' UTR
ENST00000373955.5	protocadherin 15 (USH1F)
ENST00000613346.4	alternative 5' UTR
ENST00000458638.1	QC splicing correct
ENST00000457975.2	QC splicing correct
ENST00000512524.4	MANE_select
ENST00000512524.4	not best-in-genome evidence
ENST00000450301.2	glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene
ENST00000373944.8	MANE_select
ENST00000373944.8	ZW10 interactor
ENST00000494312.5	ZW10 interactor
ENST00000318387.6	ZW10 interactor
ENST00000460654.5	ZW10 interactor
ENST00000361148.6	ZW10 interactor
ENST00000478181.5	ZW10 interactor
ENST00000467523.1	QC splicing correct
ENST00000655098.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000434711.1	pseudogene similar to part of tubulin, beta, 2 (TUBB2)
ENST00000435086.1	novel pseudogene (KIAA0733)
ENST00000418296.1	dual specificity phosphatase 18 (DUSP18) pseudogene
ENST00000373935.4	MANE_select
ENST00000373935.4	inositol polyphosphate multikinase (IMPK)
ENST00000312966.6	tumor protein, translationally-controlled 1 (TPT1) pseudogene
ENST00000333926.6	MANE_select
ENST00000333926.6	uncharacterized hematopoietic stem/progenitor cells protein MDS029
ENST00000464703.5	uncharacterized hematopoietic stem/progenitor cells protein MDS029
ENST00000489785.5	uncharacterized hematopoietic stem/progenitor cells protein MDS029
ENST00000440189.1	putative novel transcript
ENST00000373910.9	MANE_select
ENST00000373899.3	transcription factor 6-like 1 (mitochondrial transcription factor 1-like)
ENST00000487519.6	MANE_select
ENST00000487519.6	transcription factor 6-like 1 (mitochondrial transcription factor 1-like)
ENST00000373895.7	transcription factor 6-like 1 (mitochondrial transcription factor 1-like)
ENST00000395377.2	transcription factor 6-like 1 (mitochondrial transcription factor 1-like)
ENST00000373886.8	MANE_select
ENST00000373886.8	bicaudal C homolog 1 (Drosophila)
ENST00000263103.1	bicaudal C homolog 1 (Drosophila)
ENST00000332869.5	novel pseudogene (FLJ37659)
ENST00000660389.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657547.1	Assembled from SLRseq reads (SRP049776)
ENST00000666624.1	Assembled from SLRseq reads (SRP049776)
ENST00000661888.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667734.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661129.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432535.1	putative novel transcript
ENST00000654311.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660129.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657805.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653466.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669076.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661278.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666160.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000429404.1	TNF receptor-associated factor 6 (TRAF6) pseudogene
ENST00000373880.9	MANE_select
ENST00000373878.3	novel protein (DKFZp761N042)
ENST00000472199.1	putative novel transcript
ENST00000618804.5	MANE_select
ENST00000618804.5	NP_937858.2
ENST00000621119.4	QC splicing correct
ENST00000468840.6	NP_001137245.1
ENST00000489341.5	family with sequence similarity 13, member C1
ENST00000512919.5	alternative 5' UTR
ENST00000503444.1	alternative 5' UTR
ENST00000433249.1	QC splicing correct
ENST00000663923.1	Assembled from SLRseq reads (SRP049776)
ENST00000446432.1	mitochondrial ribosomal protein L50 (FLJ20493) (MRPL50) pseudogene
ENST00000450677.1	novel transcript
ENST00000395348.8	MANE_select
ENST00000395348.8	alternative 5' UTR
ENST00000395347.1	alternative 5' UTR
ENST00000490066.1	QC splicing correct
ENST00000414264.6	MANE_select
ENST00000414264.6	novel transcript
ENST00000430431.5	QC splicing correct
ENST00000263102.7	CCDS7257.1
ENST00000263102.7	MANE_select
ENST00000521074.1	alternative 5' UTR
ENST00000444900.1	novel protein (LOC283025)
ENST00000280772.7	MANE_select
ENST00000373820.5	ankyrin 3, node of Ranvier (ankyrin G)
ENST00000502769.5	ankyrin 3, node of Ranvier (ankyrin G)
ENST00000355288.6	NP_001140.2
ENST00000489505.2	ankyrin 3, node of Ranvier (ankyrin G)
ENST00000480699.5	ankyrin 3, node of Ranvier (ankyrin G)
ENST00000612776.4	NAGNAG splice site
ENST00000459732.2	ankyrin 3, node of Ranvier (ankyrin G)
ENST00000465749.2	ankyrin 3, node of Ranvier (ankyrin G)
ENST00000467420.6	ankyrin 3, node of Ranvier (ankyrin G)
ENST00000373815.5	ankyrin 3, node of Ranvier (ankyrin G)
ENST00000486349.2	ankyrin 3, node of Ranvier (ankyrin G)
ENST00000460468.5	ankyrin 3, node of Ranvier (ankyrin G)
ENST00000474360.1	ankyrin 3, node of Ranvier (ankyrin G)
ENST00000414383.1	QC splicing correct
ENST00000503220.1	novel protein similar to ADP-ribosylation factor-like 4 (ARL4)
ENST00000503220.1	probable pseudogene
ENST00000519078.6	alternative 5' UTR
ENST00000519760.1	QC splicing correct
ENST00000395284.8	MANE_select
ENST00000395284.8	QC splicing correct
ENST00000448257.6	alternative 5' UTR
ENST00000373809.2	NP_203698.1
ENST00000337910.10	MANE_select
ENST00000337910.10	rho-related BTB domain containing 1
ENST00000357917.4	rho-related BTB domain containing 1
ENST00000496237.1	rho-related BTB domain containing 1
ENST00000461910.1	rho-related BTB domain containing 1
ENST00000490827.1	rho-related BTB domain containing 1
ENST00000483488.1	rho-related BTB domain containing 1
ENST00000417931.1	putatiev novel transcript
ENST00000399298.8	MANE_select
ENST00000277749.9	novel protein
ENST00000488505.2	QC splicing correct
ENST00000661365.1	Assembled from SLRseq reads (SRP049776)
ENST00000648843.3	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648843.3	MANE_select
ENST00000648843.3	alternative 5' UTR
ENST00000389639.3	novel protein
ENST00000644638.1	non canonical polymorphism
ENST00000279873.12	MANE_select
ENST00000279873.12	modulator recognition factor 2 (MRF2)
ENST00000647323.1	CAGE supported TSS
ENST00000309334.5	modulator recognition factor 2 (MRF2)
ENST00000315289.6	novel protein (FLJ39352)
ENST00000373789.8	MANE_select
ENST00000395260.3	rhotekin 2 (RTKN2)
ENST00000442753.1	putative novel transcript
ENST00000669855.1	Assembled from SLRseq reads (SRP049776)
ENST00000653033.1	Assembled from SLRseq reads (SRP049776)
ENST00000659216.1	Assembled from SLRseq reads (SRP049776)
ENST00000661473.1	Assembled from SLRseq reads (SRP049776)
ENST00000395254.8	MANE_select
ENST00000395254.8	novel protein (KIAA0844)
ENST00000421210.1	alternative 5' UTR
ENST00000344640.7	QC splicing correct
ENST00000425290.1	novel transcript
ENST00000412255.1	pseudogene similar to part of aldehyde dehydrogenase 7 family, member A1 (ALDH7A1)
ENST00000373783.3	MANE_select
ENST00000373783.3	novel protein (FLJ14547)
ENST00000242480.4	MANE_select
ENST00000242480.4	early growth response 2 (Krox-20 homolog, Drosophila)
ENST00000637191.1	alternative 5' UTR
ENST00000433019.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000433019.2	novel transcript
ENST00000277746.11	MANE_select
ENST00000277746.11	nuclear receptor binding factor 2
ENST00000467356.5	this variant and one or more of variant fragments .1.4 through .1.6 could be part of a single variant
ENST00000467356.5	thyroid hormone receptor interactor 8
ENST00000399262.7	MANE_select
ENST00000327520.7	thyroid hormone receptor interactor 8, variant 2 (FLJ21338)
ENST00000497922.1	this variant and variant fragment .1.3 could be part of a single variant
ENST00000497922.1	thyroid hormone receptor interactor 8
ENST00000490669.1	this variant and variant fragment .1.3 could be part of a single variant
ENST00000490669.1	thyroid hormone receptor interactor 8
ENST00000483298.1	this variant and variant fragment .1.3 could be part of a single variant
ENST00000483298.1	thyroid hormone receptor interactor 8
ENST00000633035.1	CAGE supported TSS
ENST00000414123.1	CDA11 protein (CDA11) pseudogene
ENST00000450055.1	px19-like protein (PX19) pseudogene
ENST00000430304.1	pseudogene similar to part of heat shock 10kDa protein 1 (chaperonin 10) (HSPE1)
ENST00000373758.5	MANE_select
ENST00000654322.1	Assembled from SLRseq reads (SRP049776)
ENST00000448009.1	mitochondrial ribosomal protein L35 (MRPL35) pseudogene
ENST00000444770.1	novel transcript
ENST00000654191.1	Assembled from SLRseq reads (SRP049776)
ENST00000660795.1	Assembled from SLRseq reads (SRP049776)
ENST00000664760.1	Assembled from SLRseq reads (SRP049776)
ENST00000452821.1	ribosomal protein L7a (RPL7A) pseudogene
ENST00000451946.1	putative novel transcript
ENST00000412976.1	activator of S phase kinase (DBF4) (ASK) pseudogene
ENST00000432217.1	ribosomal protein L17 (RPL17) pseudogene
ENST00000404883.2	annexin A2 pseudogene 3
ENST00000425902.2	QC splicing correct
ENST00000655566.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000604859.1	weak homology
ENST00000436904.1	pseudogene similar to part of myosin light chain 1 slow a (MLC1SA)
ENST00000441175.1	pseudogene similar to part of itchy homolog E3 ubiquitin protein ligase (mouse) (ITCH)
ENST00000648274.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000669518.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667597.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653705.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666779.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659321.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671392.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000599409.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666619.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657227.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661052.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659135.1	Assembled from SLRseq reads (SRP049776)
ENST00000600848.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658125.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000598902.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671334.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000601926.6	Assembled from SLRseq reads (SRP049776)
ENST00000670657.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000601888.4	Assembled from SLRseq reads (SRP049776)
ENST00000598092.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663281.1	Assembled from SLRseq reads (SRP049776)
ENST00000671055.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657308.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659387.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668041.1	Assembled from SLRseq reads (SRP049776)
ENST00000660014.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660014.1	Assembled from SLRseq reads (SRP049776)
ENST00000659962.1	Assembled from SLRseq reads (SRP049776)
ENST00000659814.1	Assembled from SLRseq reads (SRP049776)
ENST00000666706.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660825.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660324.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671025.1	Assembled from SLRseq reads (SRP049776)
ENST00000671182.1	Assembled from SLRseq reads (SRP049776)
ENST00000433211.7	MANE_select
ENST00000433211.7	alpha-catenin-like protein (MGC26194) (VR22)
ENST00000373735.1	alpha-catenin-like protein (MGC26194) (VR22)
ENST00000494580.1	bA65E10.1.2 in Em:AL607023
ENST00000494580.1	novel transcript
ENST00000330298.6	alpha-catenin-like protein (MGC26194) (VR22)
ENST00000330298.6	alternative 5' UTR
ENST00000361320.5	MANE_select
ENST00000361320.5	novel protein
ENST00000485868.5	novel transcript
ENST00000472278.1	novel transcript
ENST00000422963.1	putative novel transcript
ENST00000422016.1	ribosomal protein L7a (RPL7A) pseudogene
ENST00000425765.1	aldo-keto reductase family 1, member B10 (aldose reductase) (AKR1B10) pseudogene
ENST00000454107.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000225171.7	MANE_select
ENST00000483798.6	QC splicing correct
ENST00000480963.5	novel transcript
ENST00000480180.1	novel transcript
ENST00000455312.1	novel pseudogene
ENST00000610279.1	CAGE supported TSS
ENST00000212015.11	MANE_select
ENST00000406900.5	alternative 5' UTR
ENST00000277817.10	QC splicing correct
ENST00000373700.9	MANE_select
ENST00000480158.1	novel transcript
ENST00000480158.1	this variant and one or more of variant fragments .1.4 and .1.7 could be part of a single variant
ENST00000506515.1	alternative 5' UTR
ENST00000515753.1	alternative 5' UTR
ENST00000435889.1	ribosomal protein S3A (RPS3A) pseudogene
ENST00000354393.6	sarcomeric protein myopalladin, 145 kDa (MYOP)
ENST00000358913.10	MANE_select
ENST00000358913.10	ccontinued from Em:AC024258.2.1 in Em:AC024258; continues as Em:AC016395.1.1 in Em:AC016395
ENST00000358913.10	sarcomeric protein myopalladin, 145 kDa (MYOP)
ENST00000373675.3	sarcomeric protein myopalladin, 145 kDa (MYOP), variant 3 (FLJ14437)
ENST00000373673.5	MANE_select
ENST00000373673.5	atonal homolog 7 (Drosophila)
ENST00000444086.1	QC splicing correct
ENST00000429634.1	novel transcript
ENST00000443208.1	pseudogene similar to part of the keratin family of proteins
ENST00000358769.7	MANE_select
ENST00000358769.7	genebuild_only_MANE
ENST00000469172.5	heterogeneous nuclear ribonucleoprotein H3 (2H9), variant 2 (FLJ34092)
ENST00000461310.5	novel transcript
ENST00000461310.5	this variant and variant .6.11 could be part of a single variant
ENST00000265866.12	MANE_select
ENST00000480987.5	novel transcript
ENST00000486854.5	novel transcript
ENST00000486854.5	this variant and variant .6.11 could be part of a single variant
ENST00000467249.1	novel transcript
ENST00000467249.1	this variant and one or more of variants .6.6 and .6.11 could be part of a single variant
ENST00000354695.5	heterogeneous nuclear ribonucleoprotein H3 (2H9)
ENST00000481819.5	heterogeneous nuclear ribonucleoprotein H3 (2H9), variant 4 (DKFZp586F0222)
ENST00000491200.5	heterogeneous nuclear ribonucleoprotein H3 (2H9)
ENST00000490442.5	heterogeneous nuclear ribonucleoprotein H3 (2H9)
ENST00000478698.1	heterogeneous nuclear ribonucleoprotein H3 (2H9)
ENST00000478698.1	this variant and variant .6.10 could be part of a single variant
ENST00000466493.5	QC splicing correct
ENST00000463210.6	QC splicing correct
ENST00000602465.6	MANE_select
ENST00000265865.3	FLJ36895
ENST00000472394.2	QC splicing correct
ENST00000342616.4	FLJ10063
ENST00000551118.6	QC splicing correct
ENST00000551118.6	non canonical U12
ENST00000358410.8	MANE_select
ENST00000358410.8	QC splicing correct
ENST00000358410.8	non canonical U12
ENST00000399179.6	NAGNAG splice site
ENST00000415623.1	ribosomal protein L26 (RPL26) pseudogene
ENST00000609923.6	MANE_select
ENST00000439904.3	QC splicing correct
ENST00000414397.1	ribosomal protein L26 (RPL26) pseudogene
ENST00000422205.1	novel pseudogene
ENST00000373644.5	MANE_select
ENST00000373644.5	leukemia-associated protein with a CXXC domain (LCX)
ENST00000419176.1	ribosomal protein S3A (RPS3A) pseudogene
ENST00000536391.5	alternative 5' UTR
ENST00000538031.5	QC splicing correct
ENST00000538031.5	alternative 5' UTR
ENST00000543719.5	confirm experimentally
ENST00000539539.5	alternative 5' UTR
ENST00000265872.11	MANE_select
ENST00000479143.2	QC splicing correct
ENST00000543706.1	QC splicing correct
ENST00000298596.11	MANE_select
ENST00000399162.2	C10orf24
ENST00000650255.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000483593.5	QC splicing correct
ENST00000373585.8	MANE_select
ENST00000471475.1	novel transcript
ENST00000466265.1	novel transcript
ENST00000354185.9	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 21
ENST00000354185.9	MANE_select
ENST00000626493.2	align_id:3541726|asmbl_31891
ENST00000635779.2	align_id:3541722|asmbl_31887
ENST00000637101.2	align_id:3541711|asmbl_31876
ENST00000637323.2	align_id:3541716|asmbl_31881
ENST00000637420.2	align_id:3541727|asmbl_31892
ENST00000637738.2	align_id:3541720|asmbl_31885
ENST00000638119.2	align_id:3541710|asmbl_31875
ENST00000674936.1	align_id:3541729|asmbl_31894
ENST00000674660.1	HsBN_lib12:Read_93253-Barcode%3DBC095:length%3D1996
ENST00000674660.1	align_id:3541719|asmbl_31884
ENST00000676080.1	align_id:3541712|asmbl_31877
ENST00000675576.1	align_id:3541717|asmbl_31882
ENST00000361983.7	MANE_select
ENST00000361983.7	novel protein (DKFZP586B0923)(KIAA1279)
ENST00000636200.2	align_id:3541723|asmbl_31888
ENST00000635971.2	align_id:3541728|asmbl_31893
ENST00000674897.1	align_id:3541714|asmbl_31879
ENST00000481912.2	novel transcript
ENST00000627949.4	align_id:3541724|asmbl_31889
ENST00000399158.2	endothelial-derived gene 1 (EG1)(EG-1, DKFZP434N185) pseudogene
ENST00000411655.1	actin, beta (ACTB) pseudogene
ENST00000242465.4	MANE_select
ENST00000242465.4	proteoglycan 1, secretory granule (PPG, PRG, SERGLYCIN)
ENST00000462445.1	putative novel transcript
ENST00000373382.5	QC splicing correct
ENST00000489656.5	vacuolar protein sorting 26 (yeast) (HB58, Hbeta58, FLJ12930)
ENST00000263559.11	MANE_select
ENST00000263559.11	genebuild_only_MANE
ENST00000497564.5	QC splicing correct
ENST00000490696.5	QC splicing correct
ENST00000467852.1	vacuolar protein sorting 26 (yeast) (HB58, Hbeta58, FLJ12930)
ENST00000497022.1	vacuolar protein sorting 26 (yeast) (HB58, Hbeta58, FLJ12930)
ENST00000438591.1	ribosomal protein S12 (RPS12) pseudogene
ENST00000359655.9	MANE_select
ENST00000359655.9	suppressor of var1, 3-like 1 (S. cerevisiae)(SUV3)
ENST00000471069.5	suppressor of var1, 3-like 1 (S. cerevisiae)(SUV3)
ENST00000483572.5	suppressor of var1, 3-like 1 (S. cerevisiae)(SUV3)
ENST00000422378.1	suppressor of var1, 3-like 1 (S. cerevisiae)(SUV3)
ENST00000478227.5	suppressor of var1, 3-like 1 (S. cerevisiae)(SUV3)
ENST00000486661.1	suppressor of var1, 3-like 1 (S. cerevisiae)(SUV3)
ENST00000497254.1	suppressor of var1, 3-like 1 (S. cerevisiae)(SUV3)
ENST00000354624.6	MANE_select
ENST00000354624.6	novel hexokinase domain containing protein (FLJ37767)
ENST00000488706.1	putative novel transcript
ENST00000470920.1	putative novel transcript
ENST00000413220.1	putative novel transcript
ENST00000436817.6	CAGE supported TSS
ENST00000450646.6	alternative 5' UTR
ENST00000480047.5	NMD likely if extended
ENST00000476368.6	alternative 5' UTR
ENST00000643399.2	CAGE supported TSS
ENST00000643399.2	LR annotation
ENST00000643399.2	alternative 5' UTR
ENST00000298649.8	CAGE supported TSS
ENST00000298649.8	LR annotation
ENST00000359426.7	CAGE supported TSS
ENST00000359426.7	LR annotation
ENST00000359426.7	MANE_select
ENST00000493591.6	CAGE supported TSS
ENST00000494253.1	QC splicing correct
ENST00000470050.1	hexokinase 1 (HKI, HXK1)
ENST00000435088.1	ribosomal protein S15a (RPS15A) pseudogene
ENST00000373307.5	tachykinin receptor 2 (SKR,NK2R,NKNAR,TAC2R), varinat 2
ENST00000373306.5	MANE_select
ENST00000373306.5	tachykinin receptor 2 (SKR,NK2R,NKNAR,TAC2R), varinat 1
ENST00000444398.1	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 1 (ATP5G) pseudogene
ENST00000373290.7	MANE_select
ENST00000373290.7	transmembrane 4 superfamily member tetraspan NET-7 (NET-7)
ENST00000654329.1	Assembled from RACEseq reads
ENST00000430550.1	novel pseudogene
ENST00000242462.5	MANE_select
ENST00000242462.5	neurogenin 3 (ngn3, Atoh5, Math4B)
ENST00000428753.1	putative novel transcript
ENST00000440153.1	ATP synthase 6 (MTATP6)(ATP6) pseudogene
ENST00000425216.1	cytochrome c oxidase II (MTCO2)(COII) pseudogene
ENST00000415223.1	cytochrome c oxidase I (MTCO1)(COI) pseudogene
ENST00000418575.1	NADH dehydrogenase 2 (MTND2) pseudogene
ENST00000430341.1	NADH dehydrogenase 1 (MTND1) pseudogene
ENST00000373279.6	MANE_select
ENST00000373279.6	novel protein (LOC219738)
ENST00000491890.1	novel protein (LOC219738)
ENST00000421716.1	novel protein (LOC219738)
ENST00000438138.1	ribosomal protein L5 (RPL5) pseudogene
ENST00000645393.2	MANE_select
ENST00000398978.8	LR annotation
ENST00000398978.8	NP_005194
ENST00000398978.8	QC splicing correct
ENST00000479733.5	QC splicing correct
ENST00000354547.7	LR annotation
ENST00000520133.5	QC splicing correct
ENST00000456019.1	collagen, type XIII, alpha 1
ENST00000667615.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655496.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427247.1	putative novel transcript
ENST00000653732.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659203.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000677255.1	SLR-seq_HsBN_lib9
ENST00000676699.1	SLR-seq_HsBN_lib6
ENST00000676683.1	SLR-seq_HsBN_lib9
ENST00000677659.1	SLR-seq_HsBN_lib7
ENST00000676609.1	CAGE supported TSS
ENST00000676609.1	alternative 5' UTR
ENST00000676609.1	intropolis_filtered
ENST00000676923.1	SLR-seq_HsBN_lib11
ENST00000679349.1	Ensembl_RNAseq_introns
ENST00000679349.1	SLR-seq_TB0000035
ENST00000679349.1	alternative 5' UTR
ENST00000679349.1	intropolis_filtered_canonical_pos
ENST00000373255.9	CCDS7296.1
ENST00000373255.9	H2A histone family, member Y2
ENST00000373255.9	MANE_select
ENST00000678178.1	Snaptron_GTEX
ENST00000678178.1	intropolis_filtered
ENST00000676608.1	EST:DA067026 (cerebellum)
ENST00000676608.1	Snaptron_GTEX
ENST00000676608.1	alternative 5' UTR
ENST00000676608.1	intropolis_filtered
ENST00000455786.1	H2A histone family, member Y2
ENST00000676692.1	EST:BE786956 (large cell carcinoma)
ENST00000676692.1	alternative 5' UTR
ENST00000679292.1	Snaptron_GTEX
ENST00000676896.1	Snaptron_GTEX
ENST00000676896.1	intropolis_filtered
ENST00000677881.1	intropolis_filtered
ENST00000678191.1	Ensembl_RNAseq_introns_testes
ENST00000678425.1	Snaptron_GTEX
ENST00000678425.1	intropolis_filtered
ENST00000677507.1	intropolis_filtered
ENST00000678762.1	Ensembl_RNAseq_introns_adrenal
ENST00000678762.1	intropolis_filtered_canonical_pos
ENST00000678931.1	Snaptron_GTEX
ENST00000678931.1	intropolis_filtered
ENST00000678503.1	Snaptron_GTEX
ENST00000678503.1	intropolis_filtered
ENST00000678195.1	intropolis_filtered
ENST00000677373.1	Snaptron_GTEX
ENST00000677373.1	intropolis_filtered
ENST00000679230.1	Snaptron_GTEX
ENST00000678586.1	Snaptron_GTEX
ENST00000677894.1	Snaptron_GTEX
ENST00000677894.1	intropolis_filtered
ENST00000678214.1	SLR-seq_HsBN_lib9
ENST00000677954.1	Snaptron_GTEX
ENST00000677954.1	intropolis_filtered
ENST00000678682.1	Snaptron_GTEX
ENST00000678682.1	intropolis_filtered
ENST00000677268.1	SLR-seq_HsBN_lib11
ENST00000677268.1	SLR-seq_HsBN_lib7
ENST00000677557.1	Snaptron_GTEX
ENST00000677557.1	intropolis_filtered
ENST00000678526.1	intropolis_filtered
ENST00000373248.5	QC splicing correct
ENST00000373248.5	alternative 3' UTR
ENST00000307864.3	MANE_select
ENST00000494143.5	novel transcript
ENST00000335494.5	novel protein (MGC34695)
ENST00000287078.7	MANE_select
ENST00000287078.7	novel protein (MGC34695)
ENST00000479086.1	novel transcript
ENST00000373241.9	MANE_select
ENST00000373241.9	SAR1a gene homolog 1 (S. cerevisiae)
ENST00000373238.5	SAR1a gene homolog 1 (S. cerevisiae)
ENST00000373238.5	alternative 5' UTR
ENST00000373238.5	alternatively spliced 5' UTR, shares CDS with bA367H5.4.1
ENST00000452767.1	QC splicing correct
ENST00000373236.1	SAR1a gene homolog 1 (S. cerevisiae)
ENST00000477464.1	SAR1a gene homolog 1 (S. cerevisiae)
ENST00000373239.2	QC splicing correct
ENST00000373239.2	alternative 5' UTR
ENST00000428512.1	calbindin 2, 29kDa (calretinin) pseudogene
ENST00000435591.1	ribosomal protein S25 (RPS25) pseudogene
ENST00000373232.8	MANE_select
ENST00000373232.8	pyrophosphatase (inorganic)
ENST00000495346.1	pyrophosphatase (inorganic)
ENST00000277942.7	MANE_select
ENST00000277942.7	confirm experimentally
ENST00000355790.8	novel protein (FLJ10751)
ENST00000373224.5	alternative 5' UTR
ENST00000373224.5	novel protein (FLJ10751)
ENST00000446961.3	novel protein (FLJ10751)
ENST00000358141.6	novel protein (FLJ10751)
ENST00000430943.1	novel pseudogene
ENST00000373218.5	MANE_select
ENST00000373218.5	eukaryotic translation initiation factor 4E binding protein 2
ENST00000287139.8	MANE_select
ENST00000287139.8	nodal homolog (mouse)
ENST00000414871.1	nodal homolog (mouse)
ENST00000263563.7	MANE_select
ENST00000427625.1	YY1 transcription factor pseudogene
ENST00000441259.2	MANE_select
ENST00000441259.2	genebuild_only_MANE
ENST00000373207.2	MANE_select
ENST00000373207.2	a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 14
ENST00000373208.5	a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 14
ENST00000299290.5	novel protein (FLJ32820)
ENST00000394982.2	NMD likely if extended
ENST00000394982.2	QC splicing correct
ENST00000435209.1	ribosomal protein S26 (RPS26) pseudogene
ENST00000373202.8	MANE_select
ENST00000486993.1	sphingosine-1-phosphate lyase 1
ENST00000409118.2	sphingosine-1-phosphate lyase 1
ENST00000299299.4	MANE_select
ENST00000493228.1	6-pyruvoyl-tetrahydropterin synthase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1)
ENST00000654967.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664582.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000560700.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000335350.10	MANE_select
ENST00000449737.5	putative novel transcript
ENST00000447119.2	putative novel transcript
ENST00000373189.6	CAGE supported TSS
ENST00000373189.6	LR annotation
ENST00000373189.6	MANE_select
ENST00000373189.6	equilibrative nucleoside transporter 3 (ENT3)
ENST00000469204.1	equilibrative nucleoside transporter 3 (ENT3)
ENST00000224721.12	LR annotation
ENST00000224721.12	MANE_select
ENST00000224721.12	upstream ATG
ENST00000461841.7	upstream ATG
ENST00000299366.11	upstream ATG
ENST00000616684.4	upstream ATG
ENST00000470494.5	cadherin related 23
ENST00000428918.1	novel transcript
ENST00000441508.4	MANE_select
ENST00000441508.4	alternative 5' UTR
ENST00000398786.2	QC splicing correct
ENST00000394957.8	MANE_select
ENST00000470317.2	novel transcript
ENST00000481568.2	novel transcript
ENST00000394936.8	MANE_select
ENST00000493143.1	surfactant, pulmonary-associated protein A1 (PSAP,PSPA,SP-A,SFTP1,SP-A1,COLEC4)
ENST00000441348.1	putative novel transcript
ENST00000373115.5	MANE_select
ENST00000373115.5	carbohydrate (chondroitin 6) sulfotransferase 3
ENST00000373109.7	MANE_select
ENST00000463279.6	QC splicing correct
ENST00000469121.5	sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
ENST00000460053.1	sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
ENST00000495888.1	sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
ENST00000483699.1	sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 (KIAA0275)
ENST00000672957.1	CAGE supported TSS
ENST00000672957.1	LR annotation
ENST00000672957.1	MANE_select
ENST00000342444.8	QC splicing correct
ENST00000317126.8	alternative 5' UTR
ENST00000461369.6	QC splicing correct
ENST00000527593.5	alternative 5' UTR
ENST00000524829.5	alternative 5' UTR
ENST00000526751.5	alternative 5' UTR
ENST00000492502.2	novel transcript
ENST00000533958.1	alternative 5' UTR
ENST00000416278.1	ribosomal protein L15 (RPL15) pseudogene
ENST00000299381.5	MANE_select
ENST00000299381.5	novel protein
ENST00000478193.5	novel transcript
ENST00000470481.2	novel transcript
ENST00000307365.3	HIF-1 responsive protein (RTP801,REDD1,FLJ20500)
ENST00000473155.1	novel transcript
ENST00000444643.7	NP_060096.3
ENST00000463786.2	alternative 3' UTR
ENST00000476605.7	QC splicing correct
ENST00000361114.10	MANE_select
ENST00000361114.10	overlapping uORF
ENST00000604238.2	overlapping uORF
ENST00000431638.1	QC splicing correct
ENST00000425543.1	cytochrome c oxidase subunit VIIc (COX7C) pseudogene
ENST00000437647.1	HMG17 pseudogene
ENST00000433335.1	novel pseudogene (FLJ12684)
ENST00000373053.7	novel protein
ENST00000357157.10	QC splicing correct
ENST00000483185.1	putative novel transcript
ENST00000334011.10	MANE_select
ENST00000334011.10	oncoprotein induced transcript 3 (FLJ39116)
ENST00000428039.1	nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1) pseudogene
ENST00000373032.4	MANE_select
ENST00000373032.4	phospholipase A2, group XIII
ENST00000396131.2	ribosomal protein L17 (RPL17) pseudogene
ENST00000307116.6	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide I
ENST00000442202.1	novel pseudogene
ENST00000431293.2	QC splicing correct
ENST00000357321.9	MANE_select
ENST00000357321.9	nudix (nucleoside diphosphate linked moiety X)-type motif 13
ENST00000488223.5	nudix (nucleoside diphosphate linked moiety X)-type motif 13
ENST00000469925.1	nudix (nucleoside diphosphate linked moiety X)-type motif 13
ENST00000372997.3	nudix (nucleoside diphosphate linked moiety X)-type motif 13
ENST00000494307.1	QC splicing correct
ENST00000372979.9	MANE_select
ENST00000484976.6	suppressor of S. cerevisiae gcr2 (HSGT1)
ENST00000453402.5	suppressor of S. cerevisiae gcr2 (HSGT1)
ENST00000413026.1	suppressor of S. cerevisiae gcr2 (HSGT1)
ENST00000242505.11	MANE_select
ENST00000242505.11	novel protein (KIAA0974)
ENST00000372955.7	novel protein
ENST00000445951.5	novel protein
ENST00000475829.5	novel transcript
ENST00000470798.5	novel transcript
ENST00000466261.1	novel transcript
ENST00000468462.1	novel transcript (FLJ21536)
ENST00000469143.1	QC splicing correct
ENST00000453189.2	QC splicing correct
ENST00000372950.6	MANE_select
ENST00000455776.1	eukaryotic translation initiation factor 4A, isoform 2 (EIF4A2) pseudogene
ENST00000479005.1	mitochondrial ribosomal protein S16
ENST00000372945.8	MANE_select
ENST00000372945.8	mitochondrial ribosomal protein S16
ENST00000372940.3	mitochondrial ribosomal protein S16
ENST00000471251.5	mitochondrial ribosomal protein S16
ENST00000473427.1	mitochondrial ribosomal protein S16
ENST00000457758.1	putative novel transcript
ENST00000394864.2	putative novel transcript
ENST00000462684.5	tetratricopeptide repeat-containing protein (LOC118491) (isoform A)
ENST00000495161.5	tetratricopeptide repeat-containing protein (LOC118491) (isoform B)
ENST00000433268.5	tetratricopeptide repeat-containing protein (LOC118491) (FLJ25765)
ENST00000493787.6	QC splicing correct
ENST00000340329.7	QC splicing correct
ENST00000372921.10	MANE_select
ENST00000372921.10	annexin A7
ENST00000372919.8	annexin A7
ENST00000463788.1	annexin A7
ENST00000492380.1	annexin A7
ENST00000394847.3	annexin A7
ENST00000427492.1	putative novel transcript
ENST00000440913.1	ribosomal protein L26 (RPL26) pseudogene
ENST00000487126.5	QC splicing correct
ENST00000299432.7	MANE_select
ENST00000299432.7	genebuild_only_MANE
ENST00000360663.10	MANE_select
ENST00000360663.10	protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta)
ENST00000342558.3	protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta)
ENST00000495897.2	protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta)
ENST00000422977.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000422977.2	Assembled from SLRseq reads (SRP049776)
ENST00000422977.2	putative novel transcript
ENST00000620559.2	Assembled from SLRseq reads (SRP049776)
ENST00000442133.9	Assembled from SLRseq reads (SRP049776)
ENST00000442133.9	QC splicing correct
ENST00000620302.2	Assembled from SLRseq reads (SRP049776)
ENST00000439792.1	QC splicing correct
ENST00000418501.5	NMD exception
ENST00000466048.6	NMD exception
ENST00000424265.5	NMD exception
ENST00000339859.8	NP_689799
ENST00000339859.8	alternative 5' UTR
ENST00000422491.7	NMD exception
ENST00000413442.5	alternative 5' UTR
ENST00000433394.1	alternative 5' UTR
ENST00000474929.1	alternative 5' UTR
ENST00000450370.1	ribosomal protein S26 (RPS26) pseudogene
ENST00000359322.5	MANE_select
ENST00000359322.5	QC splicing correct
ENST00000372873.8	FLJ12921
ENST00000394810.3	MANE_select
ENST00000668336.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000607450.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654036.1	Assembled from SLRseq reads (SRP049776)
ENST00000443782.6	QC splicing correct
ENST00000374094.8	not best-in-genome evidence
ENST00000508551.1	glutamate dehydrogenase pseudogene 3
ENST00000422884.1	dual specificity phosphatase 8 (DUSP8) pseudogene
ENST00000345254.9	MANE_select
ENST00000345254.9	SEC24 related gene family, member C (S. cerevisiae)
ENST00000465076.5	SEC24 related gene family, member C (S. cerevisiae)
ENST00000339365.2	variant 2; alternatively spliced in 5' UTR
ENST00000477008.1	SEC24 related gene family, member C (S. cerevisiae)
ENST00000496827.1	SEC24 related gene family, member C (S. cerevisiae)
ENST00000372841.8	MANE_select
ENST00000465695.1	putative novel transcript
ENST00000372833.6	MANE_select
ENST00000604729.6	MANE_select
ENST00000492395.5	novel protein
ENST00000492395.5	this variant and variant fragment .15.4 could be part of one single variant
ENST00000425051.5	QC splicing correct
ENST00000489234.1	QC splicing correct
ENST00000487278.1	novel transcript
ENST00000466354.1	novel transcript
ENST00000466568.1	putative novel transcript
ENST00000309979.11	MANE_select
ENST00000309979.11	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
ENST00000463410.1	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
ENST00000465929.1	QC splicing correct
ENST00000398701.2	putative novel transcript
ENST00000351293.7	calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma
ENST00000423381.6	CAGE supported TSS
ENST00000423381.6	MANE_select
ENST00000322635.7	calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma
ENST00000433289.5	calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma
ENST00000305762.11	calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma
ENST00000372765.5	calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma
ENST00000472912.5	calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma
ENST00000441192.2	alternative 3' UTR
ENST00000474131.5	calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma
ENST00000474131.5	this variant and variant fragment .4.12 could be part of a single variant
ENST00000492020.5	calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma
ENST00000492020.5	this variant and one of variants .4.8 and .4.10 could be part of a single variant
ENST00000477652.1	calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma
ENST00000477652.1	this variant and one or more of variants .4.8 through .4.10 could be part of a single variant
ENST00000434147.1	putative novel transcript
ENST00000446730.3	QC splicing correct
ENST00000481390.5	QC splicing correct
ENST00000481390.5	alternative 5' UTR
ENST00000496926.1	plasminogen activator, urokinase
ENST00000496926.1	this variant and variant fragment .2.6 could be part of a single variant
ENST00000372764.4	MANE_select
ENST00000372764.4	plasminogen activator, urokinase
ENST00000494287.1	ORF 24 aa
ENST00000494287.1	plasminogen activator, urokinase
ENST00000409178.5	novel protein (FLJ35198)
ENST00000372755.7	vinculin
ENST00000211998.10	MANE_select
ENST00000211998.10	vinculin
ENST00000461383.1	vinculin
ENST00000472585.1	vinculin
ENST00000416076.1	QC splicing correct
ENST00000355264.9	MANE_select
ENST00000355264.9	adaptor-related protein complex 3, mu 1 subunit
ENST00000372745.1	adaptor-related protein complex 3, mu 1 subunit
ENST00000372745.1	alternative 5' UTR
ENST00000372745.1	alternatively spliced 5' UTR shares CDS with bA178G16.3.1
ENST00000480373.1	adaptor-related protein complex 3, mu 1 subunit
ENST00000487653.1	adaptor-related protein complex 3, mu 1 subunit
ENST00000539909.6	CAGE supported TSS
ENST00000539909.6	LR annotation
ENST00000539909.6	MANE_select
ENST00000478611.2	QC splicing correct
ENST00000372734.5	CAGE supported TSS
ENST00000372734.5	LR annotation
ENST00000467840.1	adenosine kinase
ENST00000661461.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000395972.2	RAB5C, member RAS oncogene family (RABC5) pseudogene
ENST00000448214.7	QC splicing correct
ENST00000448214.7	contniued from Em:AC012046.2 in Em:AC012046
ENST00000448214.7	novel transcript
ENST00000609392.1	nested 454 RNA-Seq supported
ENST00000398689.2	polymerase (RNA) III (DNA directed) polypeptide D, 44kDa (POLR3D) pseudogene
ENST00000454758.1	novel pseudogene
ENST00000648828.1	alternative 5' UTR
ENST00000648725.1	alternative 5' UTR
ENST00000648159.1	alternative 5' UTR
ENST00000649006.1	alternative 5' UTR
ENST00000649463.1	alternative 5' UTR
ENST00000372725.6	alternative 5' UTR
ENST00000372725.6	alternatively spliced 5' UTR, shares CDS with Em:AC018511.1.1
ENST00000372725.6	alternatively spliced 5' UTR, shares CDS with Em:AC063962.1.1
ENST00000372725.6	monocytic leukemia zinc finger protein-related factor (MORF)
ENST00000650232.1	alternative 5' UTR
ENST00000648370.1	alternative 5' UTR
ENST00000648899.1	alternative 5' UTR
ENST00000650434.1	alternative 5' UTR
ENST00000649119.1	alternative 5' UTR
ENST00000648892.1	monocytic leukemia zinc finger protein-related factor (MORF)
ENST00000647890.1	alternative 5' UTR
ENST00000372724.6	monocytic leukemia zinc finger protein-related factor (MORF)
ENST00000372714.6	alternative 5' UTR
ENST00000372714.6	alternatively spliced 5' UTR, shares CDS with Em:AC018511.1.1
ENST00000372714.6	alternatively spliced 5' UTR, shares CDS with Em:AC063962.1.1
ENST00000372714.6	monocytic leukemia zinc finger protein-related factor (MORF)
ENST00000648048.1	alternative 5' UTR
ENST00000287239.10	MANE_select
ENST00000287239.10	monocytic leukemia zinc finger protein-related factor (MORF)
ENST00000649375.1	alternative 5' UTR
ENST00000647637.1	alternative 5' UTR
ENST00000372711.2	alternative 5' UTR
ENST00000604130.1	alternative 5' UTR
ENST00000648302.1	NMD likely if extended
ENST00000490365.1	novel transcript
ENST00000413431.1	putative novel transcript
ENST00000436608.1	QC splicing correct
ENST00000649504.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000434706.1	peptidylprolyl isomerase A (cyclophilin A)(PPIA) pseudogene
ENST00000472493.6	CAGE supported TSS
ENST00000472493.6	Testis restricted isoform (TMDP) as described by Chen HH et al. (2004) J Biol Chem. 279 (PMID: 15252030)
ENST00000472493.6	dual specificity phosphatase 13 (BEDP, TMDP, FLJ32450)
ENST00000372702.7	Muscle restricted isoform (MDSP) as described by Chen HH et al. (2004) J Biol Chem. 279 (40), 41404-41413 (PMID: 15252030)
ENST00000372702.7	NMD exception
ENST00000372702.7	NP_001007272.1
ENST00000464872.5	QC splicing correct
ENST00000605915.5	CAGE supported TSS
ENST00000478873.6	CAGE supported TSS
ENST00000478873.6	QC splicing correct
ENST00000494588.2	QC splicing correct
ENST00000372700.7	confirm experimentally
ENST00000607487.5	not best-in-genome evidence
ENST00000607009.1	NMD likely if extended
ENST00000473072.2	QC splicing correct
ENST00000447533.5	alternative 5' UTR
ENST00000447533.5	novel protein
ENST00000671730.1	CAGE supported TSS
ENST00000542569.6	CAGE supported TSS
ENST00000542569.6	MANE_select
ENST00000542569.6	genebuild_only_MANE
ENST00000542569.6	upstream ATG
ENST00000649316.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000372687.4	novel protein (FLJ25082)
ENST00000372538.8	MANE_select
ENST00000372538.8	novel protein (FLJ23841)
ENST00000460899.5	putative novel transcript
ENST00000494596.5	novel transcript
ENST00000470947.5	novel transcript
ENST00000469299.1	QC splicing correct
ENST00000469299.1	novel transcript
ENST00000490521.1	novel transcript
ENST00000491270.1	putative novel transcript
ENST00000666247.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671219.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668612.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000524517.5	QC splicing correct
ENST00000663224.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670946.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665971.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665971.1	Assembled from SLRseq reads (SRP049776)
ENST00000660657.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669449.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000528121.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000416398.1	novel transcript (LOC253264)
ENST00000526759.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668415.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000661246.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000649714.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000661189.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668572.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000660346.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656537.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670172.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663601.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661449.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449384.1	ribosomal protein L39 (RPL39) pseudogene
ENST00000412453.2	high mobility group AT-hook 1 (HMGA1) pseudogene
ENST00000416656.1	sperm autoantigenic protein 17 (SPA17)(SP17, SP17-1) pseudogene
ENST00000372524.5	MANE_select
ENST00000372524.5	novel protein (MGC2555)
ENST00000609182.1	CAGE supported TSS
ENST00000609200.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000609200.2	CAGE supported TSS
ENST00000611255.5	MANE_select
ENST00000611255.5	non canonical conserved
ENST00000593699.5	non canonical other
ENST00000372499.5	QC splicing correct
ENST00000488655.5	QC splicing correct
ENST00000468134.1	QC splicing correct
ENST00000596228.5	NAGNAG splice site
ENST00000488759.5	QC splicing correct
ENST00000483375.1	putative novel transcript
ENST00000493194.2	QC splicing correct
ENST00000493690.1	putative novel transcript
ENST00000670381.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445111.1	putative novel transcript
ENST00000412137.1	putative novel transcript
ENST00000416294.1	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 1 (ATP5G1) pseudogene
ENST00000639601.1	QC splicing correct
ENST00000639205.1	NAGNAG splice site
ENST00000639486.1	NAGNAG splice site
ENST00000639486.1	NP_001309761.1
ENST00000640523.1	NAGNAG splice site
ENST00000639344.1	QC splicing correct
ENST00000638848.1	NAGNAG splice site
ENST00000639090.1	NAGNAG splice site
ENST00000639090.1	QC splicing correct
ENST00000639489.1	NAGNAG splice site
ENST00000372408.7	NAGNAG splice site
ENST00000639691.1	NAGNAG splice site
ENST00000639691.1	alternative 3' UTR
ENST00000638512.1	NAGNAG splice site
ENST00000372421.10	NAGNAG splice site
ENST00000372437.6	NAGNAG splice site
ENST00000638895.1	NAGNAG splice site
ENST00000457953.6	NAGNAG splice site
ENST00000372440.6	NAGNAG splice site
ENST00000404771.8	NAGNAG splice site
ENST00000404771.8	QC splicing correct
ENST00000638203.1	NAGNAG splice site
ENST00000638306.1	NAGNAG splice site
ENST00000638351.1	NAGNAG splice site
ENST00000638606.1	NAGNAG splice site
ENST00000640182.1	NAGNAG splice site
ENST00000639968.1	NAGNAG splice site
ENST00000372403.9	NAGNAG splice site
ENST00000639851.1	NAGNAG splice site
ENST00000468471.2	putative novel transcript
ENST00000640093.1	alternative 3' UTR
ENST00000639544.1	confirm experimentally
ENST00000434208.6	confirm experimentally
ENST00000286628.14	MANE_select
ENST00000640141.1	NP_001309765.1
ENST00000639406.1	NP_001258448.1
ENST00000626620.3	confirm experimentally
ENST00000638575.1	confirm experimentally
ENST00000638759.1	confirm experimentally
ENST00000638999.1	NMD likely if extended
ENST00000637862.2	CAGE supported TSS
ENST00000637862.2	upstream ATG
ENST00000475352.1	putative novel transcript
ENST00000640632.1	CAGE supported TSS
ENST00000639120.1	QC splicing correct
ENST00000484343.2	442494     442425
ENST00000484343.2	QC splicing correct
ENST00000638531.1	CAGE supported TSS
ENST00000638531.1	alternative 5' UTR
ENST00000618048.2	NP_001258449.1
ENST00000481070.1	NP_001258450.1
ENST00000429850.2	putative novel transcript
ENST00000458661.6	QC splicing correct
ENST00000426234.5	QC splicing correct
ENST00000430464.1	QC splicing correct
ENST00000413564.1	QC splicing correct
ENST00000418515.1	novel transcript
ENST00000426313.1	cytochrome c oxidase subunit VIc (COX6C) pseudogene
ENST00000394628.2	novel zinc finger pseudogene (KIAA1629)
ENST00000439688.1	IMP (inosine monophosphate) dehydrogenase 2 (IMPDH2) pseudogene
ENST00000434097.2	QC splicing correct
ENST00000372391.7	MANE_select
ENST00000489547.1	discs, large (Drosophila) homolog 5 (DLG5) (P-dlg, KIAA0583)
ENST00000489547.1	this variant and one or more of variant fragments .1.6 and .1.8 through .1.9 could be part of a single variant
ENST00000484525.1	discs, large (Drosophila) homolog 5 (DLG5) (P-dlg, KIAA0583)
ENST00000449852.1	putative novel transcript
ENST00000446960.1	H2A histone family, member Z (H2AFZ) pseudogene
ENST00000372371.8	MANE_select
ENST00000372371.8	polymerase (RNA) III (DNA directed) (155kD) (RPC155)
ENST00000472014.5	novel transcript
ENST00000484760.1	novel transcript
ENST00000484760.1	this variant and variant fragment .1.3 could be part of a single variant
ENST00000435275.5	non canonical conserved
ENST00000478655.6	ribosomal protein S24
ENST00000372360.9	CAGE supported TSS
ENST00000372360.9	LR annotation
ENST00000372360.9	MANE_select
ENST00000645698.1	ribosomal protein S24
ENST00000476545.6	ribosomal protein S24
ENST00000466129.6	ribosomal protein S24
ENST00000465692.2	NMD likely if extended
ENST00000482069.5	ribosomal protein S24
ENST00000480662.2	ribosomal protein S24
ENST00000670962.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000659477.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653428.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653428.1	putative novel transcript
ENST00000423770.6	Assembled from SLRseq reads (SRP049776)
ENST00000434974.1	putative novel transcript (LOC283048) (FLJ33712)
ENST00000432742.1	QC splicing correct
ENST00000667413.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000415959.1	QC splicing correct
ENST00000461034.1	QC splicing correct
ENST00000668124.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659842.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665488.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669110.1	Assembled from SLRseq reads (SRP049776)
ENST00000455498.1	putative novel transcript
ENST00000428862.5	QC splicing correct
ENST00000456353.5	QC splicing correct
ENST00000665190.1	Assembled from SLRseq reads (SRP049776)
ENST00000440151.1	novel transcript
ENST00000334512.10	MANE_select
ENST00000334512.10	retinoic acid induced 17
ENST00000472035.5	retinoic acid induced 17
ENST00000478357.1	retinoic acid induced 17
ENST00000498681.5	peptidylprolyl isomerase F (cyclophilin F)
ENST00000225174.8	MANE_select
ENST00000225174.8	peptidylprolyl isomerase F (cyclophilin F)
ENST00000492149.1	peptidylprolyl isomerase F (cyclophilin F)
ENST00000448165.1	peptidylprolyl isomerase F (cyclophilin F)
ENST00000372336.4	MANE_select
ENST00000372336.4	hypothetical protein FLJ90798
ENST00000372333.3	novel protein
ENST00000438554.2	QC splicing correct
ENST00000648988.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000520547.4	MANE_select
ENST00000442381.1	ribosomal protein S12 (RPS12) pseudogene
ENST00000372325.7	MANE_select
ENST00000372325.7	alternative 5' UTR
ENST00000417041.1	QC splicing correct
ENST00000417041.1	alternative 5' UTR
ENST00000492049.1	alternative 5' UTR
ENST00000402234.2	mannose-binding lectin (protein C) 2, soluble (opsonic defect) (MBL2) pseudogene
ENST00000446429.1	pseudogene similar to part of surfactant pulmonary-associated protein
ENST00000398636.8	LR annotation
ENST00000398636.8	MANE_select
ENST00000398636.8	alternative 5' UTR
ENST00000419470.6	NP_001087239.2
ENST00000429958.5	alternative 5' UTR
ENST00000421256.1	novel transcript
ENST00000482985.4	QC splicing correct
ENST00000482985.4	non canonical TEC
ENST00000671459.1	Assembled from SLRseq reads (SRP049776)
ENST00000601369.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000601369.6	novel transcript
ENST00000662025.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670682.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670682.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000658528.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000477192.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000477192.6	QC splicing correct
ENST00000477192.6	novel transcript
ENST00000665716.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665716.1	Assembled from SLRseq reads (SRP049776)
ENST00000665716.1	novel transcript
ENST00000483080.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661316.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000488805.5	novel transcript
ENST00000659471.1	Assembled from SLRseq reads (SRP049776)
ENST00000659471.1	novel transcript
ENST00000484794.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000495430.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000495430.2	novel transcript
ENST00000496359.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000496359.6	novel transcript
ENST00000430963.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419697.1	novel transcript
ENST00000669121.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669121.1	Assembled from SLRseq reads (SRP049776)
ENST00000669121.1	novel transcript
ENST00000653620.1	Assembled from SLRseq reads (SRP049776)
ENST00000372321.5	QC splicing correct
ENST00000342531.2	QC splicing correct
ENST00000602967.5	QC splicing correct
ENST00000602967.5	not best-in-genome evidence
ENST00000458273.2	cathepsin L (CTSL) pseudogene
ENST00000421889.1	novel transcript
ENST00000480805.1	mannose-binding lectin (protein A) 1, pseudogene 1 novel transcript
ENST00000372292.8	MANE_select
ENST00000444384.3	QC splicing correct
ENST00000448729.6	novel transcript (LOC219347)
ENST00000432070.2	novel transcript (LOC219347) (FLJ11611)
ENST00000472622.5	novel transcript
ENST00000372281.8	MANE_select
ENST00000372275.5	novel protein
ENST00000372274.5	novel protein
ENST00000372273.7	novel protein (DKFZp686M1819)
ENST00000467529.5	novel transcript (DKFZp667M1512)
ENST00000463029.5	novel transcript
ENST00000476173.5	novel transcript
ENST00000483732.5	novel transcript
ENST00000463209.1	novel transcript
ENST00000450179.1	novel protein
ENST00000417197.1	ribosomal protein L22 (RPL22) pseudogene
ENST00000372267.6	QC splicing correct
ENST00000372263.4	MANE_select
ENST00000422982.8	MANE_select
ENST00000422982.8	QC splicing correct
ENST00000422982.8	alternative 5' UTR
ENST00000372231.7	QC splicing correct
ENST00000438331.5	alternative 5' UTR
ENST00000438331.5	alternatively spliced in 5' UTR, shares CDS with bA40F6.1.1
ENST00000438331.5	annexin A11 (isoform c)
ENST00000463340.1	annexin A11
ENST00000447489.1	annexin A11
ENST00000447489.1	this fragment and variant fragment bA369J21.9.5 could be part of one single variant
ENST00000481805.1	annexin A11
ENST00000437799.1	annexin A11
ENST00000463657.1	annexin A11
ENST00000474545.1	annexin A11
ENST00000660450.1	Assembled from SLRseq reads (SRP049776)
ENST00000671081.1	Assembled from SLRseq reads (SRP049776)
ENST00000439728.1	ribosomal protein S12 (RPS12) pseudogene
ENST00000423182.2	pseudogene similar to nuclear pore complex interacting proteins (NPIP)
ENST00000485270.5	methionine adenosyltransferase I, alpha (FLJ23278)
ENST00000372213.8	MANE_select
ENST00000372213.8	methionine adenosyltransferase I, alpha
ENST00000480845.1	methionine adenosyltransferase I, alpha
ENST00000455001.1	methionine adenosyltransferase I, alpha
ENST00000416657.1	putative novel transcript
ENST00000372204.7	novel protein (LOC143241)
ENST00000372202.6	MANE_select
ENST00000372202.6	alternative 5' UTR
ENST00000372202.6	alternatively spliced in 5' UTR, shares CDS with bA36D19.5.1
ENST00000372202.6	novel protein (LOC143241)
ENST00000454362.5	alternative 5' UTR
ENST00000454362.5	alternatively spliced in 5' UTR, shares partial CDS with bA36D19.5.1
ENST00000454362.5	novel protein (LOC143241)
ENST00000453477.1	alternative 5' UTR
ENST00000453477.1	alternatively spliced in 5' UTR, shares partial CDS with bA36D19.5.1
ENST00000453477.1	novel protein (LOC143241)
ENST00000372199.5	novel protein
ENST00000372198.5	novel protein
ENST00000372197.5	alternative 5' UTR
ENST00000372197.5	alternatively spliced in 5' UTR, shares CDS with bA36D19.6.1
ENST00000372197.5	novel protein (MGC16186)
ENST00000411538.5	alternative 5' UTR
ENST00000411538.5	alternatively spliced in 5' UTR, shares partial CDS with bA36D19.6.1
ENST00000411538.5	novel protein
ENST00000256039.3	MANE_select
ENST00000256039.3	alternative 5' UTR
ENST00000256039.3	alternatively spliced in 5' UTR, shares CDS with bA36D19.6.1
ENST00000256039.3	novel protein (FLJ36059)
ENST00000372188.5	QC splicing correct
ENST00000372185.5	5' UTR
ENST00000372185.5	alternative 5' UTR
ENST00000372185.5	novel protein
ENST00000606162.6	MANE_select
ENST00000606162.6	alternative 5' UTR
ENST00000372181.1	alternative 5' UTR
ENST00000372181.1	alternatively spliced in 5' UTR, shares CDS with Em:AC021028.1.1
ENST00000372181.1	novel protein (MGC4248)
ENST00000481124.5	novel tetraspanin family domain-containing protein
ENST00000372158.6	novel tetraspanin family domain-containing protein
ENST00000372157.6	novel tetraspanin family domain-containing protein
ENST00000469149.1	novel transcript
ENST00000372164.7	novel tetraspanin family domain-containing protein
ENST00000341863.10	novel tetraspanin family domain-containing protein
ENST00000372156.5	novel tetraspanin family domain-containing protein
ENST00000265450.5	novel transcript (FLJ30768)
ENST00000417559.1	putative novel transcript
ENST00000339284.6	QC splicing correct
ENST00000372150.7	QC splicing correct
ENST00000481537.1	novel transcript (FLJ34199)
ENST00000456245.1	eukaryotic translation initiation factor 5A2 (EIF5A2) pseudogene
ENST00000435808.1	phenylalanyl-tRNA synthetase beta-subunit (FRSB) pseudogene
ENST00000429678.1	tryptophanyl tRNA synthetase 2 (mitochondrial) (WARS2) pseudogene
ENST00000419698.1	replication protein A2, 32kDa (RPA2) pseudogene
ENST00000372141.7	BC136811.1
ENST00000372141.7	MANE_select
ENST00000372142.6	QC splicing correct
ENST00000372142.6	neuregulin 3
ENST00000647581.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000432204.1	serine/threonine protein kinase pseudogene
ENST00000441776.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000441776.2	novel transcript
ENST00000659573.1	Assembled from SLRseq reads (SRP049776)
ENST00000432108.1	putative novel transcript
ENST00000372134.6	MANE_select
ENST00000372134.6	growth hormone inducible transmembrane protein
ENST00000647830.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000372126.4	MANE_select
ENST00000372126.4	novel protein
ENST00000472542.1	novel transcript
ENST00000623527.4	MANE_select
ENST00000623527.4	MT-protocadherin (KIAA1775)
ENST00000332904.7	MT-protocadherin (KIAA1775)
ENST00000459673.1	novel transcript
ENST00000372113.7	MANE_select
ENST00000372113.7	QC splicing correct
ENST00000358110.7	retinal G protein coupled receptor
ENST00000652092.2	CAGE supported TSS
ENST00000652092.2	LR annotation
ENST00000652092.2	MANE_select
ENST00000483660.5	retinal G protein coupled receptor
ENST00000359452.9	retinal G protein coupled receptor
ENST00000372092.3	retinal G protein coupled receptor
ENST00000483771.5	retinal G protein coupled receptor
ENST00000497161.1	retinal G protein coupled receptor
ENST00000497161.1	this variant and variant fragment .6.4 could be part of a single variant
ENST00000479725.1	retinal G protein coupled receptor
ENST00000479725.1	this variant and one of variant fragments .6.4 or .6.5 could be part of a single variant
ENST00000372105.4	MANE_select
ENST00000661556.1	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000661042.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653603.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000415469.5	QC splicing correct
ENST00000437892.1	novel transcript
ENST00000663433.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666427.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669640.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661758.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000372088.8	MANE_select
ENST00000494144.5	novel transcript, variant 2 (FLJ25809)
ENST00000494586.5	CAGE supported TSS
ENST00000493409.5	CAGE supported TSS
ENST00000498300.5	novel transcript
ENST00000466105.5	novel transcript
ENST00000480006.1	CAGE supported TSS
ENST00000454178.1	QC splicing correct
ENST00000656796.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658106.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655477.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669767.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655081.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000444137.1	putative novel transcript
ENST00000435367.2	QC splicing correct
ENST00000441457.1	novel transcript
ENST00000652859.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659541.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668011.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000327946.12	MANE_select
ENST00000327946.12	glutamate receptor, ionotropic, delta 1
ENST00000552278.2	QC splicing correct
ENST00000464741.2	QC splicing correct
ENST00000412054.1	acid phosphatase 1, soluble (ACP1) pseudogene
ENST00000670831.1	Assembled from SLRseq reads (SRP049776)
ENST00000656749.1	Assembled from SLRseq reads (SRP049776)
ENST00000660918.1	Assembled from SLRseq reads (SRP049776)
ENST00000671245.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000484070.1	novel transcript
ENST00000298767.10	MANE_select
ENST00000489996.1	novel transcript
ENST00000428940.2	CAGE supported TSS
ENST00000241891.10	MANE_select
ENST00000241891.10	QC splicing correct
ENST00000263066.11	alternative 5' UTR
ENST00000429277.7	CAGE supported TSS
ENST00000361373.9	CAGE supported TSS
ENST00000361373.9	LIM domain binding 3
ENST00000361373.9	MANE_select
ENST00000372066.8	LIM domain binding 3
ENST00000477489.1	LIM domain binding 3
ENST00000608826.1	CAGE supported TSS
ENST00000372037.8	MANE_select
ENST00000636056.1	NAGNAG splice site
ENST00000635816.1	NAGNAG splice site
ENST00000480152.2	bone morphogenetic protein receptor type 1A
ENST00000372027.10	MANE_select
ENST00000488950.1	QC splicing correct
ENST00000372017.4	MANE_select
ENST00000372017.4	synuclein gamma breast cancer-specific protein 1
ENST00000465679.5	synuclein gamma breast cancer-specific protein 1
ENST00000348795.8	synuclein gamma breast cancer-specific protein 1
ENST00000483064.1	synuclein gamma breast cancer-specific protein 1
ENST00000416348.1	novel protein
ENST00000372013.8	MANE_select
ENST00000561504.1	alternative 3' UTR
ENST00000433214.2	QC splicing correct
ENST00000444431.1	novel transcript (KIAA1975)
ENST00000343959.5	MANE_select
ENST00000277865.5	MANE_select
ENST00000487058.1	glutamate dehydrogenase 1
ENST00000465164.1	glutamate dehydrogenase 1
ENST00000474574.1	glutamate dehydrogenase 1
ENST00000437629.6	alternative 5' UTR
ENST00000298784.5	novel protein (FLJ12916)
ENST00000298786.5	MANE_select
ENST00000298786.5	novel protein
ENST00000454709.1	putative novel transcript
ENST00000659257.1	Assembled from SLRseq reads (SRP049776)
ENST00000671543.1	Assembled from SLRseq reads (SRP049776)
ENST00000451940.6	QC splicing correct
ENST00000663644.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668225.1	Assembled from SLRseq reads (SRP049776)
ENST00000664664.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000446751.6	Assembled from SLRseq reads (SRP049776)
ENST00000446751.6	novel transcript (FLJ34397)
ENST00000456104.5	QC splicing correct
ENST00000433530.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000433530.6	novel transcript
ENST00000447424.5	novel transcript
ENST00000433920.5	novel transcript
ENST00000666515.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663113.1	Assembled from SLRseq reads (SRP049776)
ENST00000667520.1	Assembled from SLRseq reads (SRP049776)
ENST00000654503.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654503.1	Assembled from SLRseq reads (SRP049776)
ENST00000654503.1	novel transcript
ENST00000420424.1	novel transcript
ENST00000653238.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653238.1	novel transcript
ENST00000413722.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655272.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653080.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668676.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666844.1	Assembled from SLRseq reads (SRP049776)
ENST00000660454.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660726.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417860.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417860.6	novel transcript
ENST00000663683.1	Assembled from SLRseq reads (SRP049776)
ENST00000413961.5	novel transcript
ENST00000458739.1	novel transcript
ENST00000667985.1	Assembled from SLRseq reads (SRP049776)
ENST00000664997.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662586.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662586.1	Assembled from SLRseq reads (SRP049776)
ENST00000656123.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000366446.5	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661845.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665147.1	Assembled from SLRseq reads (SRP049776)
ENST00000381707.6	MANE_select
ENST00000668804.1	Assembled from SLRseq reads (SRP049776)
ENST00000664736.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669077.1	Assembled from SLRseq reads (SRP049776)
ENST00000656958.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671238.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000381697.7	MANE_select
ENST00000465545.1	novel transcript
ENST00000432327.1	novel pseudogene
ENST00000457530.1	cathepsin L-like 1 pseudogene
ENST00000665232.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662339.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670136.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656643.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000429129.2	QC splicing correct
ENST00000417713.1	pseudogene similar to part of ring finger protein 3 (RNF3)
ENST00000662700.1	Assembled from SLRseq reads (SRP049776)
ENST00000371994.8	QC splicing correct
ENST00000371996.9	MANE_select
ENST00000371996.9	multiple inositol polyphosphate histidine phosphatase, 1
ENST00000472891.1	multiple inositol polyphosphate histidine phosphatase, 1
ENST00000446794.1	putative novel transcript
ENST00000438082.1	QC splicing correct
ENST00000438082.1	novel transcript
ENST00000354527.2	novel transcript
ENST00000414476.1	ribosomal protein S26 (RPS26) pseudogene
ENST00000361175.8	3'-phosphoadenosine 5'-phosphosulfate synthase 2
ENST00000456849.2	MANE_select
ENST00000456849.2	genebuild_only_MANE
ENST00000465996.5	QC splicing correct
ENST00000482258.1	3'-phosphoadenosine 5'-phosphosulfate synthase 2
ENST00000308448.11	novel protein (FLJ90742)
ENST00000680024.1	CAGE supported TSS
ENST00000680024.1	MANE_select
ENST00000680024.1	alternative 5' UTR
ENST00000328142.3	alternative 5' UTR
ENST00000328142.3	alternatively spliced 5' UTR, shares CDS with Em:AC022016.1.1
ENST00000328142.3	novel protein (FLJ90742)
ENST00000495903.1	alternative 5' UTR
ENST00000495903.1	novel transcript
ENST00000445946.5	LR annotation
ENST00000445946.5	MANE_select
ENST00000371953.8	MANE_select
ENST00000371953.8	phosphatase and tensin homolog (mutated in multiple advanced cancers 1)
ENST00000487939.1	phosphatase and tensin homolog (mutated in multiple advanced cancers 1)
ENST00000487939.1	this fragment and one or more of variant fragments .1.4 and .1.5 could be part of a single variant.
ENST00000462694.1	phosphatase and tensin homolog (mutated in multiple advanced cancers 1)
ENST00000462694.1	this fragment and one or more of variant fragments 1.4 and .1.5 could be part of a single variant
ENST00000498703.1	phosphatase and tensin homolog (mutated in multiple advanced cancers 1)
ENST00000498703.1	this fragment and one or more of variant fragments .1.2, .1.3 and .1.5 could be part of a single variant
ENST00000472832.2	phosphatase and tensin homolog (mutated in multiple advanced cancers 1)
ENST00000472832.2	this fragment and one or more of variant fragments .1.2 through .1.4 could be part of a single variant
ENST00000416679.1	putative novel transcript
ENST00000395256.2	ribosomal protein L11 (RPL11) pseudogene
ENST00000439659.1	mediator of RNA polymerase II transcription, subunit 6 homolog (yeast) (MED6) pseudogene
ENST00000371947.7	novel protein (FLJ11218)
ENST00000331772.9	MANE_select
ENST00000331772.9	novel protein (FLJ11218)
ENST00000466945.5	novel transcript
ENST00000481793.1	novel transcript
ENST00000371939.7	QC splicing correct
ENST00000433316.1	ribosomal protein L7 (RPL7) pseudogene
ENST00000238983.9	MANE_select
ENST00000355843.2	alternative 5' UTR
ENST00000441370.1	keratin 8 (KRT8) pseudogene
ENST00000404459.2	MANE_select
ENST00000453021.1	CHC1L (chromosome condensation 1-like, RCC1-like G exchanging factor RLG) pseudogene
ENST00000404743.9	MANE_select
ENST00000404743.9	QC splicing correct
ENST00000371930.5	MANE_select
ENST00000371930.5	novel protein (MGC22805)
ENST00000476963.1	novel transcript
ENST00000415579.2	novel pseudogene (FLJ12598)
ENST00000371927.7	novel Mov34/MPN/PAD-1 family domain containing protein (KIAA1373)
ENST00000461650.1	novel transcript
ENST00000371926.8	MANE_select
ENST00000371926.8	novel Mov34/MPN/PAD-1 family domain containing protein
ENST00000468698.1	putative novel transcript
ENST00000371924.5	novel Mov34/MPN/PAD-1 family domain containing protein (FLJ35627)
ENST00000371922.1	novel Mov34/MPN/PAD-1 family domain containing protein (FLJ33359)
ENST00000437930.4	QC splicing correct
ENST00000224784.10	MANE_select
ENST00000224784.10	actin, alpha 2, smooth muscle, aorta
ENST00000480297.5	actin, alpha 2, smooth muscle, aorta
ENST00000458159.5	actin, alpha 2, smooth muscle, aorta
ENST00000415557.1	actin, alpha 2, smooth muscle, aorta
ENST00000488967.5	actin, alpha 2, smooth muscle, aorta
ENST00000482085.1	actin, alpha 2, smooth muscle, aorta
ENST00000352159.8	QC splicing correct
ENST00000484444.5	tumor necrosis factor receptor superfamily, member 6, variant 4 (FAS soluble protein)
ENST00000357339.6	tumor necrosis factor receptor superfamily, member 6, variant 2 (FAS soluble protein)
ENST00000652046.1	MANE_select
ENST00000652046.1	tumor necrosis factor receptor superfamily, member 6
ENST00000488877.5	tumor necrosis factor receptor superfamily, member 6
ENST00000494410.5	QC splicing correct
ENST00000479522.5	tumor necrosis factor receptor superfamily, member 6, variant 5 (FAS soluble protein truncated variant)
ENST00000492756.5	tumor necrosis factor receptor superfamily, member 6
ENST00000355279.2	tumor necrosis factor receptor superfamily, member 6
ENST00000460510.5	tumor necrosis factor receptor superfamily, member 6
ENST00000477270.5	tumor necrosis factor receptor superfamily, member 6
ENST00000466081.5	tumor necrosis factor receptor superfamily, member 6
ENST00000494799.5	tumor necrosis factor receptor superfamily, member 6
ENST00000487314.1	tumor necrosis factor receptor superfamily, member 6
ENST00000453728.1	novel zinc finger pseudogene
ENST00000371852.4	MANE_select
ENST00000371852.4	cholesterol 25-hydroxylase
ENST00000371837.5	QC splicing correct
ENST00000336233.10	MANE_select
ENST00000336233.10	lipase A, lysosomal acid, cholesterol esterase (Wolman disease)
ENST00000428800.5	alternative 5' UTR
ENST00000428800.5	lipase A, lysosomal acid, cholesterol esterase (Wolman disease)
ENST00000282673.5	alternative 5' UTR
ENST00000282673.5	lipase A, lysosomal acid, cholesterol esterase (Wolman disease)
ENST00000487618.5	lipase A, lysosomal acid, cholesterol esterase (Wolman disease)
ENST00000463623.1	lipase A, lysosomal acid, cholesterol esterase (Wolman disease)
ENST00000489359.1	lipase A, lysosomal acid, cholesterol esterase (Wolman disease)
ENST00000679653.1	intropolis
ENST00000448897.1	putative novel transcript
ENST00000437032.1	putative novel transcript
ENST00000659383.1	Assembled from SLRseq reads (SRP049776)
ENST00000679515.1	Snaptron_GTEX
ENST00000681850.1	intropolis
ENST00000638108.1	CAGE supported TSS
ENST00000638108.1	alternative 5' UTR
ENST00000679734.1	alternative 5' UTR
ENST00000680954.1	alternative 5' UTR
ENST00000681150.1	intropolis
ENST00000680558.1	intropolis
ENST00000679608.1	intropolis
ENST00000680809.1	alternative 5' UTR
ENST00000371826.4	CAGE supported TSS
ENST00000371826.4	MANE_select
ENST00000679755.1	Snaptron_GTEX
ENST00000679755.1	alternative 5' UTR
ENST00000679755.1	intropolis
ENST00000679606.1	intropolis
ENST00000679619.1	Snaptron_GTEX
ENST00000679619.1	intropolis
ENST00000611722.2	intropolis
ENST00000681843.1	intropolis
ENST00000679781.1	alternative 5' UTR
ENST00000681376.1	Snaptron_GTEX
ENST00000681376.1	alternative 5' UTR
ENST00000681376.1	intropolis
ENST00000681277.1	SLR-seq_TB0000033
ENST00000679923.1	Snaptron_GTEX
ENST00000679923.1	alternative 5' UTR
ENST00000679923.1	intropolis
ENST00000680085.1	Snaptron_GTEX
ENST00000680085.1	alternative 5' UTR
ENST00000680085.1	intropolis
ENST00000371818.9	MANE_select
ENST00000371818.9	interferon-induced protein with tetratricopeptide repeats 4
ENST00000680779.1	Snaptron_GTEX
ENST00000680779.1	intropolis
ENST00000679536.1	Snaptron_GTEX
ENST00000679536.1	alternative 5' UTR
ENST00000679536.1	intropolis
ENST00000371811.4	CAGE supported TSS
ENST00000371811.4	interferon-induced protein with tetratricopeptide repeats 4
ENST00000680037.1	CAGE supported TSS
ENST00000680037.1	alternative 5' UTR
ENST00000679583.1	CAGE supported TSS
ENST00000679583.1	Snaptron_GTEX
ENST00000679583.1	intropolis
ENST00000679897.1	Snaptron_GTEX
ENST00000679897.1	intropolis
ENST00000681178.1	Nanopore_NA12878
ENST00000681178.1	Snaptron_GTEX
ENST00000681178.1	alternative 5' UTR
ENST00000681178.1	intropolis
ENST00000681207.1	Snaptron_GTEX
ENST00000681207.1	alternative 5' UTR
ENST00000681207.1	intropolis
ENST00000418257.1	interferon-induced protein with tetratricopeptide repeats 1 (IFIT1) pseudogene
ENST00000371809.3	MANE_select
ENST00000371809.3	novel protein similar to interferon-induced protein with tetratricopeptide repeats 1 (IFIT1)
ENST00000371804.4	MANE_select
ENST00000371804.4	interferon-induced protein with tetratricopeptide repeats 1
ENST00000681359.1	Snaptron_GTEX
ENST00000681359.1	intropolis
ENST00000371795.5	MANE_select
ENST00000371795.5	retinoic acid- and interferon-inducible protein (58kD) (RI58)
ENST00000681422.1	Snaptron_GTEX
ENST00000681422.1	intropolis
ENST00000679632.1	Snaptron_GTEX
ENST00000679632.1	intropolis
ENST00000681270.1	Snaptron_GTEX
ENST00000681270.1	intropolis
ENST00000371790.5	MANE_select
ENST00000475682.1	alternative 5' UTR
ENST00000454270.5	putative novel transcript
ENST00000423474.1	putative novel transcript
ENST00000322191.10	pantothenate kinase 1
ENST00000342512.3	pantothenate kinase 1
ENST00000461829.1	pantothenate kinase 1
ENST00000461829.1	this variant and variant 3 could be part of the same variant
ENST00000488482.1	pantothenate kinase 1
ENST00000488482.1	this variant and variant 4 could be part of the same variant
ENST00000507624.1	pantothenate kinase 1 (PANK1) pseudogene
ENST00000660192.1	Assembled from SLRseq reads (SRP049776)
ENST00000454174.5	novel transcript
ENST00000451733.1	novel transcript
ENST00000428166.1	putative novel transcript
ENST00000661505.1	Assembled from SLRseq reads (SRP049776)
ENST00000657501.1	Assembled from SLRseq reads (SRP049776)
ENST00000371728.8	M-phase phosphoprotein 1
ENST00000371728.8	MANE_select
ENST00000260753.8	M-phase phosphoprotein 1
ENST00000447580.1	M-phase phosphoprotein 1
ENST00000478929.1	M-phase phosphoprotein 1
ENST00000667153.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000448963.5	novel transcript
ENST00000448490.1	novel transcript (DKFZp434P0810)
ENST00000670043.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664430.1	Assembled from SLRseq reads (SRP049776)
ENST00000428485.1	novel transcript (FLJ35900)
ENST00000665903.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653640.1	Assembled from SLRseq reads (SRP049776)
ENST00000418379.1	novel transcript
ENST00000660339.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000422206.5	novel transcript
ENST00000453889.1	putative novel transcript
ENST00000414903.1	novel transcript
ENST00000425365.1	novel transcript
ENST00000277874.10	5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)
ENST00000371719.2	5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)
ENST00000336152.8	5-hydroxytryptamine receptor 7 (adenylate cyclase-coupled)
ENST00000336152.8	MANE_select
ENST00000487998.5	ribonuclease P (30kD) (RPP30)
ENST00000371703.8	MANE_select
ENST00000371703.8	ribonuclease P (30kD) (RPP30)
ENST00000277882.7	ribonuclease P (30kD) (RPP30)
ENST00000414836.1	ribonuclease P (30kD) (RPP30)
ENST00000466462.5	ribonuclease P (30kD) (RPP30)
ENST00000489806.5	ribonuclease P (30kD) (RPP30)
ENST00000479678.1	ribonuclease P (30kD) (RPP30)
ENST00000470933.1	ribonuclease P (30kD) (RPP30)
ENST00000371697.4	CAGE supported TSS
ENST00000371697.4	MANE_select
ENST00000371697.4	cardiac ankyrin repeat protein (CARP)
ENST00000412362.1	putative novel transcript
ENST00000423621.2	Extended using assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000423621.2	novel transcript
ENST00000450119.1	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 18 (Myc-regulated) (DDX18) pseudogene
ENST00000669365.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000496708.1	QC splicing correct
ENST00000336126.6	MANE_select
ENST00000336126.6	continued_from Em:AC023902.1 in Em:AC023902
ENST00000336126.6	novel protein
ENST00000490164.1	novel transcript
ENST00000631422.1	CAGE supported TSS
ENST00000371681.8	continued_from Em:AC023902.1.1 in Em:AC023902
ENST00000371681.8	novel protein (FLJ37306)
ENST00000298068.10	MANE_select
ENST00000498446.1	novel transcript
ENST00000371667.1	novel protein
ENST00000450552.1	ribosomal protein S27 (metallopanstimulin 1) (RPS27) pseudogene
ENST00000238994.6	MANE_select
ENST00000238994.6	protein phosphatase 1, regulatory (inhibitor) subunit 3C
ENST00000455134.1	glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene
ENST00000429974.1	pseudogene similar to KIAA0887
ENST00000668345.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662946.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432938.1	putative novel transcript
ENST00000432246.1	putative novel transcript
ENST00000371627.5	MANE_select
ENST00000371627.5	tankyrase,TRF1-interacting ankyrin-related ADP-ribose polymerase 2 (tankyrase 2, TNKL, TANK2)
ENST00000311575.6	MANE_select
ENST00000311575.6	novel protein similar to brain-specific angiogenesis inhibitor 3
ENST00000610263.1	CAGE supported TSS
ENST00000265990.11	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)
ENST00000471217.5	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)
ENST00000476401.1	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)
ENST00000412050.8	alternative 5' UTR
ENST00000265997.5	MANE_select
ENST00000265997.5	novel protein
ENST00000398565.2	succinate dehydrogenase complex pseudogene
ENST00000394444.2	translational eukaryotic inititation factor 4 pseudogene
ENST00000358935.3	MANE_select
ENST00000358935.3	novel protein (FLJ20445)
ENST00000467521.6	QC splicing correct
ENST00000462465.1	novel transcript
ENST00000492319.1	novel transcript
ENST00000430958.1	MAP/microtubule affinity-regulating kinase 2 (MARK2) pseudogene
ENST00000656662.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000265986.11	MANE_select
ENST00000265986.11	insulin-degrading enzyme
ENST00000677569.1	alternative 3' UTR
ENST00000677096.1	alternative 3' UTR
ENST00000679222.1	alternative 3' UTR
ENST00000679069.1	insulin-degrading enzyme
ENST00000496903.5	insulin-degrading enzyme
ENST00000478361.6	QC splicing correct
ENST00000463640.1	insulin-degrading enzyme
ENST00000492362.1	insulin-degrading enzyme
ENST00000436178.1	insulin-degrading enzyme
ENST00000676757.1	upstream ATG
ENST00000676647.1	CAGE supported TSS
ENST00000676647.1	align_id:3544056|asmbl_3422
ENST00000676647.1	upstream ATG
ENST00000676621.1	52a2d138-c6c9-437e-b4e9-1f331e02d1b6
ENST00000676621.1	Nanopore
ENST00000677720.1	1aad97de-da49-4d4e-8c86-60b74deb5127
ENST00000677720.1	3fb2f0fb-4ae8-4604-a259-c6f5aacf5e6a
ENST00000677720.1	Nanopore
ENST00000260731.5	MANE_select
ENST00000260731.5	kinesin family member 11
ENST00000332269.6	ribosomal protein L11 (RPL11) pseudogene
ENST00000282728.10	MANE_select
ENST00000371543.5	SEC15 (S. cerevisiae)-like (SEC15L)
ENST00000260762.10	MANE_select
ENST00000260762.10	SEC15 (S. cerevisiae)-like (SEC15L)
ENST00000497262.1	putative novel transcript
ENST00000495132.5	SEC15 (S. cerevisiae)-like (SEC15L)
ENST00000458552.1	SEC15 (S. cerevisiae)-like (SEC15L)
ENST00000447000.1	pseudogene similar to part of nuclease sensitive element binding protein 1 (NSEP1)
ENST00000444965.1	putative novel transcript
ENST00000651965.1	CAGE supported TSS
ENST00000651965.1	LR annotation
ENST00000651965.1	MANE_select
ENST00000371531.5	cytochrome P450, family 26, subfamily A, polypeptide 1
ENST00000224356.5	MANE_select
ENST00000224356.5	alternative 5' UTR
ENST00000224356.5	cytochrome P450, family 26, subfamily A, polypeptide 1
ENST00000433227.1	novel pseudogene (HSPC031)
ENST00000420392.1	thyroid autoantigen 70kDa (Ku antigen)(G22P1) pseudogene
ENST00000394133.2	ribosomal protein L17 (RPL17) pseudogene
ENST00000463743.5	QC splicing correct
ENST00000359263.9	MANE_select
ENST00000359263.9	fer-1-like 3, myoferlin (C. elegans)
ENST00000358334.9	fer-1-like 3, myoferlin (C. elegans)
ENST00000474161.1	fer-1-like 3, myoferlin (C. elegans)
ENST00000485212.1	QC splicing correct
ENST00000475358.1	fer-1-like 3, myoferlin (C. elegans)
ENST00000371489.5	fer-1-like 3, myoferlin (C. elegans)
ENST00000371488.3	fer-1-like 3, myoferlin (C. elegans)
ENST00000488645.1	fer-1-like 3, myoferlin (C. elegans)
ENST00000371485.8	MANE_select
ENST00000371485.8	chromosome 10 open reading frame 3
ENST00000445435.1	chromosome 10 open reading frame 3
ENST00000496302.1	chromosome 10 open reading frame 3
ENST00000371481.9	MANE_select
ENST00000371467.5	alternative 5' UTR
ENST00000371467.5	retinol binding protein 4, plasma
ENST00000371464.8	MANE_select
ENST00000371464.8	retinol binding protein 4, plasma
ENST00000371469.2	QC splicing correct
ENST00000371469.2	retinol binding protein 4, plasma
ENST00000371447.4	MANE_select
ENST00000371447.4	phosphodiesterase 6C, cGMP-specific, cone, alpha prime
ENST00000371447.4	phosphodiesterase 6C, cGMP-specific, cone, alpha prime (PDEA2)
ENST00000475427.2	QC splicing correct
ENST00000359204.5	MANE_select
ENST00000359204.5	chromosome 10 open reading frame 4
ENST00000460752.1	chromosome 10 open reading frame 4
ENST00000483229.1	chromosome 10 open reading frame 4
ENST00000462771.1	chromosome 10 open reading frame 4
ENST00000472153.1	chromosome 10 open reading frame 4
ENST00000482719.1	chromosome 10 open reading frame 4
ENST00000630487.2	alternative 3' UTR
ENST00000478763.2	leucine-rich, glioma inactivated 1
ENST00000636754.1	alternative 3' UTR
ENST00000371418.9	MANE_select
ENST00000371418.9	leucine-rich, glioma inactivated 1
ENST00000636232.1	alternative 3' UTR
ENST00000371413.4	confirm experimentally
ENST00000371413.4	leucine-rich, glioma inactivated 1
ENST00000485458.3	leucine-rich, glioma inactivated 1
ENST00000464250.1	leucine-rich, glioma inactivated 1
ENST00000442978.1	RAB11B, member RAS oncogene family (H-YPT3) pseudogene
ENST00000371408.7	novel protein (FLJ33990)
ENST00000427197.2	MANE_select
ENST00000427197.2	genebuild_only_MANE
ENST00000483386.5	novel transcript
ENST00000494992.5	novel transcript
ENST00000371380.8	MANE_select
ENST00000371385.8	CAGE supported TSS
ENST00000371375.1	phospholipase C, epsilon 1 (PLCE, KIAA1516)
ENST00000675218.1	alternative 3' UTR
ENST00000674827.1	NAGNAG splice site
ENST00000464214.1	phospholipase C, epsilon 1 (PLCE, KIAA1516)
ENST00000438899.5	QC splicing correct
ENST00000432782.1	QC splicing correct
ENST00000453183.5	QC splicing correct
ENST00000650093.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000433038.1	novel transcript
ENST00000432707.1	putative novel transcript
ENST00000455482.1	histone deacetylase 1 (HDAC1) pseudogene
ENST00000447227.1	putative novel transcript
ENST00000425267.8	Assembled from SLRseq reads (SRP049776)
ENST00000425267.8	QC splicing correct
ENST00000371361.3	AD24 protein (FLJ12820)
ENST00000371361.3	MANE_select
ENST00000463649.5	novel transcript
ENST00000461562.1	novel transcript
ENST00000225235.5	MANE_select
ENST00000225235.5	novel protein (KIAA0608)
ENST00000485048.1	novel transcript
ENST00000457045.1	QC splicing correct
ENST00000348459.10	MANE_select
ENST00000348459.10	helicase, lymphoid-specific (LSH, PASG, SMARCA6, FLJ10339)
ENST00000419900.5	helicase, lymphoid-specific (LSH, PASG, SMARCA6, FLJ10339)
ENST00000462057.2	helicase, lymphoid-specific (LSH, PASG, SMARCA6, FLJ10339)
ENST00000466552.1	helicase, lymphoid-specific (LSH, PASG, SMARCA6, FLJ10339)
ENST00000371327.2	helicase, lymphoid-specific (LSH, PASG, SMARCA6, FLJ10339)
ENST00000464030.1	helicase, lymphoid-specific (LSH, PASG, SMARCA6, FLJ10339)
ENST00000475263.1	helicase, lymphoid-specific (LSH, PASG, SMARCA6, FLJ10339)
ENST00000432120.1	QC splicing correct
ENST00000434549.1	C-terminal binding protein 2 (CTBP2) pseudogene
ENST00000285979.11	MANE_select
ENST00000285979.11	cytochrome P450, family 2, subfamily C, polypeptide 18
ENST00000464755.1	cytochrome P450, family 2, subfamily C, polypeptide 19
ENST00000480405.2	cytochrome P450, family 2, subfamily C, polypeptide 19
ENST00000371321.9	CAGE supported TSS
ENST00000371321.9	LR annotation
ENST00000371321.9	MANE_select
ENST00000446659.1	pseudogene similar to part of NADH dehydrogenase 4 (MTND4)
ENST00000436281.1	cytochrome P450, family 2, subfamily C pseudogene
ENST00000458096.1	ribosomal protein L7a (RPL7A) pseudogene
ENST00000260682.8	CAGE supported TSS
ENST00000260682.8	LR annotation
ENST00000260682.8	MANE_select
ENST00000473496.1	cytochrome P450, family 2, subfamily C, polypeptide 9
ENST00000424125.1	mitochondrial NADH dehydrogenase 4 (MTND4) pseudogene
ENST00000457790.1	pseudogene similar to part of cytochrome P450, family 2, subfamily C
ENST00000442302.1	novel pseudogene
ENST00000371270.6	MANE_select
ENST00000422744.2	QC splicing correct
ENST00000451083.1	pseudogene similar to part of PRKC, apoptosis, WT1, regulator (PAWR)
ENST00000327739.7	QC splicing correct
ENST00000394005.3	QC splicing correct
ENST00000451737.1	putative novel transcript
ENST00000329399.7	MANE_select
ENST00000329399.7	PDZ and LIM domain 1 (elfin)
ENST00000492511.1	PDZ and LIM domain 1 (elfin)
ENST00000477757.5	PDZ and LIM domain 1 (elfin)
ENST00000490391.1	PDZ and LIM domain 1 (elfin)
ENST00000493949.1	PDZ and LIM domain 1 (elfin)
ENST00000371227.8	sorbin and SH3 domain containing 1 (CAP, SH3D5, SORB1, SH3P12, ponsin, sh3p12)
ENST00000371227.8	this variant and one or more of variants .2.3, .2.10, .2.11, .2.12 and .2.14 could be part of a single variant
ENST00000371249.6	sorbin and SH3 domain containing 1 (CAP, SH3D5, SORB1, SH3P12, ponsin, sh3p12), variant 2 (DKFZp586P1422)
ENST00000361941.7	sorbin and SH3 domain containing 1 (CAP, SH3D5, SORB1, SH3P12, ponsin, sh3p12)
ENST00000277982.9	sorbin and SH3 domain containing 1 (CAP, SH3D5, SORB1, SH3P12, ponsin, sh3p12)
ENST00000371245.7	QC splicing correct
ENST00000371241.5	sorbin and SH3 domain containing 1 (CAP, SH3D5, SORB1, SH3P12, ponsin, sh3p12)
ENST00000354106.7	sorbin and SH3 domain containing 1 (CAP, SH3D5, SORB1, SH3P12, ponsin, sh3p12)
ENST00000371239.5	sorbin and SH3 domain containing 1 (CAP, SH3D5, SORB1, SH3P12, ponsin, sh3p12)
ENST00000474353.6	NMD likely if extended
ENST00000474353.6	sorbin and SH3 domain containing 1 (CAP, SH3D5, SORB1, SH3P12, ponsin, sh3p12)
ENST00000474353.6	this variant and one or more of variant fragments .2.10, .2.11, .2.13 and .2.14 could be part of a single variant
ENST00000472854.5	sorbin and SH3 domain containing 1 (CAP, SH3D5, SORB1, SH3P12, ponsin, sh3p12)
ENST00000472854.5	this variant and one or more of variant fragments .2.3, .2.11 and .2.12 could be part of a single variant
ENST00000465489.1	sorbin and SH3 domain containing 1 (CAP, SH3D5, SORB1, SH3P12, ponsin, sh3p12)
ENST00000465489.1	this variant and one or more of variant fragments .2.11 through .2.13 could be part of a single variant
ENST00000492542.1	alternative 5' UTR
ENST00000492542.1	sorbin and SH3 domain containing 1 (CAP, SH3D5, SORB1, SH3P12, ponsin, sh3p12)
ENST00000482068.1	sorbin and SH3 domain containing 1 (CAP, SH3D5, SORB1, SH3P12, ponsin, sh3p12)
ENST00000398190.2	ribosomal protein S3A (RPS3A) pseudogene
ENST00000371224.7	MANE_select
ENST00000485428.1	this variant and one or more of variant fragments -003 and -004 could be part of a single variant
ENST00000489386.1	this variant and one or more of variant fragments -004 and -005 could be part of a single variant
ENST00000483788.1	this variant and one or more of variant fragments -003 and -005 could be part of a single variant
ENST00000371217.10	CAGE supported TSS
ENST00000371217.10	MANE_select
ENST00000371217.10	non canonical conserved
ENST00000265993.13	non canonical conserved
ENST00000430368.6	CAGE supported TSS
ENST00000430368.6	non canonical conserved
ENST00000543964.6	upstream uORF
ENST00000483213.6	ectonucleoside triphosphate diphosphohydrolase 1
ENST00000483213.6	upstream uORF
ENST00000371205.5	MANE_select
ENST00000371205.5	ectonucleoside triphosphate diphosphohydrolase 1
ENST00000494070.1	ectonucleoside triphosphate diphosphohydrolase 1
ENST00000461927.1	ectonucleoside triphosphate diphosphohydrolase 1
ENST00000422161.2	QC splicing correct
ENST00000669711.1	Assembled from SLRseq reads (SRP049776)
ENST00000416301.5	novel transcript, variant 1 (FLJ34077)
ENST00000661142.1	Assembled from SLRseq reads (SRP049776)
ENST00000661375.1	Assembled from SLRseq reads (SRP049776)
ENST00000653870.1	Assembled from SLRseq reads (SRP049776)
ENST00000451364.5	novel transcript
ENST00000671323.1	Assembled from SLRseq reads (SRP049776)
ENST00000666945.1	Assembled from SLRseq reads (SRP049776)
ENST00000665049.1	Assembled from SLRseq reads (SRP049776)
ENST00000669099.1	Assembled from SLRseq reads (SRP049776)
ENST00000655193.1	Assembled from SLRseq reads (SRP049776)
ENST00000657446.1	Assembled from SLRseq reads (SRP049776)
ENST00000664887.1	Assembled from SLRseq reads (SRP049776)
ENST00000669283.1	Assembled from SLRseq reads (SRP049776)
ENST00000669283.1	novel transcript
ENST00000671110.1	Assembled from SLRseq reads (SRP049776)
ENST00000662079.1	Assembled from SLRseq reads (SRP049776)
ENST00000661794.1	Assembled from SLRseq reads (SRP049776)
ENST00000656604.1	Assembled from SLRseq reads (SRP049776)
ENST00000414006.2	Assembled from SLRseq reads (SRP049776)
ENST00000449419.6	Assembled from SLRseq reads (SRP049776)
ENST00000449419.6	novel transcript
ENST00000668159.1	Assembled from SLRseq reads (SRP049776)
ENST00000667309.1	Assembled from SLRseq reads (SRP049776)
ENST00000452728.5	novel transcript
ENST00000427300.1	novel transcript
ENST00000454638.5	novel transcript, variant 3 (FLJ39150)
ENST00000668038.1	Assembled from SLRseq reads (SRP049776)
ENST00000458228.5	novel transcript
ENST00000449197.1	novel transcript
ENST00000427846.1	novel transcript
ENST00000667840.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000444375.1	novel transcript
ENST00000433113.1	QC splicing correct
ENST00000602648.5	alternative 5' UTR
ENST00000646931.3	MANE_select
ENST00000415692.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000465148.3	MANE_select
ENST00000669444.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000478086.5	alternative 5' UTR
ENST00000224337.10	MANE_select
ENST00000467799.6	QC splicing correct
ENST00000429734.1	nucleophosmin (nucleolar phosphoprotein B23, numatrin), NPM1 pseudogene
ENST00000371174.5	MANE_select
ENST00000371174.5	deoxynucleotidyltransferase, terminal (TDT)
ENST00000371172.8	MANE_select
ENST00000371172.8	transmembrane protein 10 (TMP10, HTMP10)
ENST00000357947.4	MANE_select
ENST00000357947.4	tolloid-like 2
ENST00000506028.2	QC splicing correct
ENST00000469598.1	tolloid-like 2
ENST00000371142.9	MANE_select
ENST00000371142.9	SM-11044 binding protein (SMBP)(EP70-P-iso)
ENST00000649367.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000485093.1	QC splicing correct
ENST00000490192.1	novel transcript
ENST00000443638.1	SM-11044 binding protein (SMBP)(EP70-P-iso)
ENST00000464654.1	novel transcript
ENST00000475401.1	novel transcript
ENST00000426339.1	nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1)(B23, NPM, NUMATRIN) pseudogene
ENST00000339364.10	MANE_select
ENST00000371110.6	FLJ35564
ENST00000467625.5	novel transcript
ENST00000489982.1	novel transcript
ENST00000456516.1	ribosomal protein S2 (RPS2) pseudogene
ENST00000371103.8	alternative 5' UTR
ENST00000371103.8	novel protein (likely ortholog of mouse transcription factor MLR2)(MLR2)
ENST00000421806.4	MANE_select
ENST00000540664.6	NP_001164237.1
ENST00000356016.7	alternative 5' UTR
ENST00000371097.8	QC splicing correct
ENST00000676381.1	CAGE supported TSS
ENST00000493486.1	novel transcript
ENST00000469510.1	putative novel transcript
ENST00000463415.1	novel transcript
ENST00000412164.1	high mobility group nucleosomal binding domain 4 (HMGN4)(NHC, HMG17L3, MGC5145) pseudogene
ENST00000266058.9	MANE_select
ENST00000266058.9	slit homolog 1 (Drosophila)
ENST00000494968.2	QC splicing correct
ENST00000371070.8	QC splicing correct
ENST00000314867.9	slit homolog 1 (Drosophila)
ENST00000497714.1	slit homolog 1 (Drosophila)
ENST00000456008.2	NMD likely if extended
ENST00000424428.1	novel transcript
ENST00000669265.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661744.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656148.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000492211.5	QC splicing correct
ENST00000358531.9	MANE_select
ENST00000358531.9	novel protein (MGC14258)
ENST00000487035.1	novel transcript
ENST00000371027.5	novel protein (MGC14258), variant 2 (FLJ36122)
ENST00000466484.1	novel transcript
ENST00000456509.1	CD164 antigen, sialomucin (CD164) pseudogene
ENST00000414870.1	ribosomal protein L12 (RPL12) pseudogene
ENST00000371021.5	MANE_select
ENST00000371021.5	frequently rearranged in advanced T-cell lymphomas
ENST00000490980.1	frequently rearranged in advanced T-cell lymphomas
ENST00000371019.4	MANE_select
ENST00000371019.4	frequently rearranged in advanced T-cell lymphomas 2
ENST00000445808.3	QC splicing correct
ENST00000491313.5	novel transcript
ENST00000479481.5	novel transcript
ENST00000370992.9	MANE_select
ENST00000536831.5	novel protein (FLJ12434)
ENST00000315563.10	novel protein (KIAA0690)
ENST00000465394.1	putative novel transcript
ENST00000487612.1	putative novel transcript
ENST00000490815.1	novel transcript
ENST00000479317.1	putative novel transcript
ENST00000618765.1	alternative 5' UTR
ENST00000439965.6	alternative 5' UTR
ENST00000622320.4	alternative 5' UTR
ENST00000442771.1	ribosomal protein L34 (RPL34) pseudogene
ENST00000422848.1	putative novel transcript
ENST00000334828.6	MANE_select
ENST00000334828.6	phosphoglycerate mutase 1 (brain)
ENST00000473929.1	QC splicing correct
ENST00000467867.1	phosphoglycerate mutase 1 (brain)
ENST00000370902.8	MANE_select
ENST00000370902.8	exosomal core protein CSL4 (CSL4)
ENST00000370886.9	QC splicing correct
ENST00000370885.8	exosomal core protein CSL4 (CSL4)
ENST00000485122.6	QC splicing correct
ENST00000370884.5	QC splicing correct
ENST00000471049.5	novel transcript
ENST00000472345.5	novel transcript
ENST00000476234.5	novel transcript
ENST00000489158.1	novel transcript
ENST00000474309.1	QC splicing correct
ENST00000370854.7	zinc finger, DHHC domain containing 16
ENST00000393760.6	MANE_select
ENST00000393760.6	genebuild_only_MANE
ENST00000414567.5	zinc finger, DHHC domain containing 16
ENST00000459777.5	zinc finger, DHHC domain containing 16
ENST00000466895.5	zinc finger, DHHC domain containing 16
ENST00000370846.8	zinc finger, DHHC domain containing 16
ENST00000352634.8	zinc finger, DHHC domain containing 16
ENST00000353979.7	zinc finger, DHHC domain containing 16
ENST00000370842.6	QC splicing correct
ENST00000345745.9	zinc finger, DHHC domain containing 16
ENST00000462924.5	zinc finger, DHHC domain containing 16
ENST00000433086.5	zinc finger, DHHC domain containing 16
ENST00000492610.5	zinc finger, DHHC domain containing 16
ENST00000495735.5	zinc finger, DHHC domain containing 16
ENST00000420089.5	zinc finger, DHHC domain containing 16
ENST00000417044.1	zinc finger, DHHC domain containing 16
ENST00000487315.1	zinc finger, DHHC domain containing 16
ENST00000492733.1	zinc finger, DHHC domain containing 16
ENST00000438925.7	MANE_select
ENST00000370782.6	QC splicing correct
ENST00000370782.6	alternative 5' UTR
ENST00000439048.1	QC splicing correct
ENST00000370664.4	MANE_select
ENST00000370664.4	novel protein (FLJ11807)
ENST00000370655.6	CAGE supported TSS
ENST00000370655.6	MANE_select
ENST00000455090.1	ankyrin repeat domain 2 (stretch responsive muscle)
ENST00000465608.1	FLJ37472
ENST00000370646.9	MANE_select
ENST00000370640.5	MANE_select
ENST00000478953.1	FLJ25925
ENST00000307450.11	MANE_select
ENST00000370626.4	MANE_select
ENST00000451097.5	novel transcript
ENST00000285605.8	MANE_select
ENST00000285605.8	NMD exception
ENST00000421644.2	QC splicing correct
ENST00000359980.5	FLJ90395, FLJ40626
ENST00000473237.1	novel transcript
ENST00000266066.4	MANE_select
ENST00000427379.2	QC splicing correct
ENST00000370602.6	MANE_select
ENST00000423054.1	QC splicing correct
ENST00000413387.5	FLJ10320
ENST00000370597.8	MANE_select
ENST00000468549.1	novel transcript
ENST00000298999.8	MANE_select
ENST00000260702.4	MANE_select
ENST00000483923.5	QC splicing correct
ENST00000370575.5	MANE_select
ENST00000494941.1	novel transcript
ENST00000462874.1	novel transcript
ENST00000361490.9	MANE_select
ENST00000462743.1	novel transcript
ENST00000497527.1	novel transcript
ENST00000474873.5	novel transcript
ENST00000465957.1	novel transcript
ENST00000660697.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000370552.8	MANE_select
ENST00000356713.5	MANE_select
ENST00000356713.5	NP_065081
ENST00000370508.7	MANE_select
ENST00000657109.1	Assembled from SLRseq reads (SRP049776)
ENST00000662162.1	Assembled from SLRseq reads (SRP049776)
ENST00000668010.1	Assembled from SLRseq reads (SRP049776)
ENST00000669986.1	Assembled from SLRseq reads (SRP049776)
ENST00000416191.2	CAGE supported TSS
ENST00000416191.2	QC splicing correct
ENST00000652903.1	Assembled from SLRseq reads (SRP049776)
ENST00000659667.1	Assembled from SLRseq reads (SRP049776)
ENST00000344586.9	MANE_select
ENST00000434701.5	QC splicing correct
ENST00000370495.6	MANE_select
ENST00000452391.2	putative novel transcript
ENST00000649102.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000370489.5	MANE_select
ENST00000370489.5	lysosomal apyrase-like protein 1
ENST00000472998.1	QC splicing correct
ENST00000418955.1	estrogen receptor binding site associated antigen 9 (EBAG9) pseudogene
ENST00000493385.5	QC splicing correct
ENST00000370476.10	CGI-32 protein
ENST00000370476.10	MANE_select
ENST00000471520.5	CGI-32 protein
ENST00000370472.4	CGI-32 protein
ENST00000016171.6	COX15 homolog cytochrome c oxidase assembly protein (yeast)
ENST00000016171.6	MANE_select
ENST00000370483.9	COX15 homolog cytochrome c oxidase assembly protein (yeast)
ENST00000497381.1	COX15 homolog cytochrome c oxidase assembly protein (yeast)
ENST00000647814.1	LR annotation
ENST00000647814.1	MANE_select
ENST00000370434.1	ATP-binding cassette sub-family C (CFTR/MRP) member 2
ENST00000496621.1	ATP-binding cassette sub-family C (CFTR/MRP) member 2
ENST00000543621.6	CAGE supported TSS
ENST00000636706.1	CAGE supported TSS
ENST00000324109.9	MANE_select
ENST00000472036.1	novel transcript
ENST00000661385.1	Assembled from SLRseq reads (SRP049776)
ENST00000661150.1	Assembled from SLRseq reads (SRP049776)
ENST00000434409.2	Assembled from SLRseq reads (SRP049776)
ENST00000434409.2	novel transcript (FLJ40792)
ENST00000370418.8	MANE_select
ENST00000370418.8	carboxypeptidase N polypeptide 1 50 kD
ENST00000441382.1	carboxypeptidase N polypeptide 1 50 kD
ENST00000436100.1	tropomyosin 4 (TPM4) pseudogene
ENST00000421367.7	MANE_select
ENST00000407654.7	alternative 5' UTR
ENST00000370408.2	alternative 5' UTR
ENST00000370397.8	MANE_select
ENST00000370397.8	conserved helix-loop ubiquitous kinase
ENST00000590930.5	QC splicing correct
ENST00000588656.1	conserved helix-loop ubiquitous kinase
ENST00000585551.1	conserved helix-loop ubiquitous kinase
ENST00000443919.1	QC splicing correct
ENST00000667469.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000444359.1	novel transcript
ENST00000354105.10	MANE_select
ENST00000468709.5	novel transcript (FLJ40576)
ENST00000482452.5	novel protein (FLJ13922)
ENST00000478047.1	novel transcript (FLJ30751)
ENST00000466955.5	novel protein
ENST00000466408.1	novel transcript
ENST00000496796.5	novel transcript
ENST00000473842.1	novel transcript
ENST00000453578.1	prohibitin (PHB) pseudogene
ENST00000370372.7	MANE_select
ENST00000361832.2	NMD likely if extended
ENST00000318222.4	MANE_select
ENST00000465680.2	QC splicing correct
ENST00000429420.1	novel transcript
ENST00000370355.3	MANE_select
ENST00000370355.3	stearoyl-CoA desaturase (delta-9-desaturase)
ENST00000668904.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659159.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654233.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654233.1	Assembled from SLRseq reads (SRP049776)
ENST00000663103.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657502.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666713.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661158.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667278.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666154.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666045.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662712.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654563.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662018.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000657262.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664100.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658059.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658059.1	Assembled from SLRseq reads (SRP049776)
ENST00000659770.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000656449.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665022.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661096.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000659075.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668316.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668101.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664224.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665755.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000454935.1	novel transcript (FLJ12974)
ENST00000654288.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669693.1	Assembled from SLRseq reads (SRP049776)
ENST00000664225.1	Assembled from SLRseq reads (SRP049776)
ENST00000664516.1	Assembled from SLRseq reads (SRP049776)
ENST00000668189.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000343737.6	MANE_select
ENST00000343737.6	wingless-type MMTV integration site family member 8B
ENST00000485800.6	novel transcript
ENST00000492667.5	novel transcript
ENST00000479697.5	QC splicing correct
ENST00000370345.8	MANE_select
ENST00000462434.5	secretory pathway component Sec31B-1
ENST00000469824.1	novel transcript
ENST00000480905.1	novel transcript
ENST00000299166.9	MANE_select
ENST00000370320.4	NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8, 19kDa
ENST00000299163.7	MANE_select
ENST00000355243.8	MANE_select
ENST00000483202.2	paired box gene 2
ENST00000608554.1	CAGE supported TSS
ENST00000370271.7	chromosome 10 open reading frame 6
ENST00000649226.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000238961.9	MANE_select
ENST00000238961.9	chromosome 10 open reading frame 6
ENST00000370269.3	chromosome 10 open reading frame 6
ENST00000481654.1	chromosome 10 open reading frame 6
ENST00000318325.6	mitochondrial ribosomal protein L43
ENST00000370241.7	mitochondrial ribosomal protein L43
ENST00000370242.8	mitochondrial ribosomal protein L43
ENST00000476012.5	mitochondrial ribosomal protein L43
ENST00000448244.5	mitochondrial ribosomal protein L43
ENST00000299179.9	mitochondrial ribosomal protein L43
ENST00000370236.5	mitochondrial ribosomal protein L43
ENST00000493646.1	mitochondrial ribosomal protein L43
ENST00000318364.12	mitochondrial ribosomal protein L43
ENST00000477279.1	mitochondrial ribosomal protein L43
ENST00000370234.4	mitochondrial ribosomal protein L43
ENST00000487059.1	mitochondrial ribosomal protein L43
ENST00000519649.5	alternative 5' UTR
ENST00000518124.5	alternative 5' UTR
ENST00000370250.8	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
ENST00000210633.3	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
ENST00000519756.1	QC splicing correct
ENST00000476171.1	QC splicing correct
ENST00000447344.1	QC splicing correct
ENST00000476766.5	QC splicing correct
ENST00000311916.8	MANE_select
ENST00000473656.5	chromosome 10 open reading frame 2
ENST00000459764.1	upstream ATG
ENST00000650396.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000426584.5	QC splicing correct
ENST00000426584.5	alternative 5' UTR
ENST00000426584.5	novel protein
ENST00000370223.7	novel protein
ENST00000489526.1	novel transcript
ENST00000429732.5	alternative 5' UTR
ENST00000429732.5	novel protein
ENST00000481129.1	alternative 5' UTR
ENST00000370220.1	alternative 5' UTR
ENST00000370220.1	novel protein (KIAA1813) (LAPSER1)
ENST00000454422.1	alternative 5' UTR
ENST00000619208.6	LR annotation
ENST00000619208.6	MANE_select
ENST00000619208.6	NP_001182192.1
ENST00000470414.1	novel transcript
ENST00000644576.1	alternative 5' UTR
ENST00000646029.1	alternative 5' UTR
ENST00000642474.1	alternative 5' UTR
ENST00000465383.5	novel transcript
ENST00000487721.1	novel transcript
ENST00000466982.1	novel transcript (FLJ34185)
ENST00000470252.1	novel transcript (FLJ35692)
ENST00000609242.1	CAGE supported TSS
ENST00000370200.6	MANE_select
ENST00000477979.5	QC splicing correct
ENST00000370196.11	MANE_select
ENST00000525019.1	QC splicing correct
ENST00000660354.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666640.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000434189.2	QC splicing correct
ENST00000669629.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666262.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000546988.3	Assembled from SLRseq reads (SRP049776)
ENST00000430651.1	novel transcript (FLJ39379)
ENST00000434878.1	QC splicing correct
ENST00000422661.1	novel transcript (FLJ34886)
ENST00000442188.1	putative novel transcript
ENST00000450669.2	QC splicing correct
ENST00000475200.5	beta-transducin repeat containing
ENST00000475200.5	split hand/foot malformation (ectrodactyly) type 3
ENST00000408038.6	beta-transducin repeat containing
ENST00000370187.8	MANE_select
ENST00000370187.8	beta-transducin repeat containing
ENST00000465182.1	beta-transducin repeat containing
ENST00000370183.2	beta-transducin repeat containing
ENST00000493877.1	beta-transducin repeat containing
ENST00000470165.1	QC splicing correct
ENST00000370151.9	MANE_select
ENST00000370151.9	novel protein (DKFZP566F084)
ENST00000370147.5	novel protein
ENST00000434727.1	novel protein
ENST00000475443.1	novel transcript
ENST00000463515.1	polymerase (DNA directed), lambda
ENST00000370168.7	polymerase (DNA directed), lambda
ENST00000370169.5	alternative 5' UTR
ENST00000370169.5	alternatively spliced 5' UTR; shares CDS with bA529I10.2.1
ENST00000370169.5	polymerase (DNA directed), lambda
ENST00000339310.7	polymerase (DNA directed), lambda
ENST00000299206.8	alternative 5' UTR
ENST00000299206.8	alternatively spliced 5' UTR; shares CDS with bA529I10.2.3
ENST00000299206.8	polymerase (DNA directed), lambda
ENST00000370172.5	polymerase (DNA directed), lambda
ENST00000370162.8	MANE_select
ENST00000370162.8	genebuild_only_MANE
ENST00000415897.5	polymerase (DNA directed), lambda
ENST00000485369.5	polymerase (DNA directed), lambda
ENST00000429502.1	polymerase (DNA directed), lambda
ENST00000470140.5	polymerase (DNA directed), lambda
ENST00000426919.5	polymerase (DNA directed), lambda
ENST00000454524.1	polymerase (DNA directed), lambda
ENST00000413344.5	polymerase (DNA directed), lambda
ENST00000461587.1	polymerase (DNA directed), lambda
ENST00000430045.1	polymerase (DNA directed), lambda
ENST00000470093.5	split hand/foot malformation (ectrodactyly) type 3
ENST00000331272.9	MANE_select
ENST00000482428.1	split hand/foot malformation (ectrodactyly) type 3
ENST00000663752.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670664.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664847.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000458489.1	putative novel transcript
ENST00000344255.8	MANE_select
ENST00000344255.8	fibroblast growth factor 8 (androgen-induced)
ENST00000469792.6	QC splicing correct
ENST00000485728.1	fibroblast growth factor 8 (androgen-induced)
ENST00000320185.6	fibroblast growth factor 8 (androgen-induced)
ENST00000346714.7	fibroblast growth factor 8 (androgen-induced)
ENST00000347978.2	fibroblast growth factor 8 (androgen-induced)
ENST00000370110.5	nucleophosmin/nucleoplasmin, 3
ENST00000474993.5	nucleophosmin/nucleoplasmin, 3
ENST00000462391.5	nucleophosmin/nucleoplasmin, 3
ENST00000468544.1	nucleophosmin/nucleoplasmin, 3
ENST00000361464.8	MANE_select
ENST00000462994.1	meningioma expressed antigen 5 (hyaluronidase)
ENST00000482611.5	meningioma expressed antigen 5 (hyaluronidase)
ENST00000357797.9	QC splicing correct
ENST00000494347.5	meningioma expressed antigen 5 (hyaluronidase)
ENST00000479811.5	QC splicing correct
ENST00000461645.1	meningioma expressed antigen 5 (hyaluronidase)
ENST00000492204.1	meningioma expressed antigen 5 (hyaluronidase)
ENST00000370094.7	meningioma expressed antigen 5 (hyaluronidase)
ENST00000429860.1	meningioma expressed antigen 5 (hyaluronidase)
ENST00000412353.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000412353.2	novel transcript
ENST00000348850.9	Kv channel interacting protein 2
ENST00000356640.7	Kv channel interacting protein 2
ENST00000356640.7	MANE_select
ENST00000355657.6	Kv channel interacting protein 2
ENST00000460388.5	Kv channel interacting protein 2
ENST00000370046.5	Kv channel interacting protein 2
ENST00000472764.5	Kv channel interacting protein 2
ENST00000434163.5	Kv channel interacting protein 2
ENST00000353068.7	Kv channel interacting protein 2
ENST00000461105.5	Kv channel interacting protein 2
ENST00000343195.8	Kv channel interacting protein 2
ENST00000239117.3	Kv channel interacting protein 2
ENST00000483385.1	Kv channel interacting protein 2
ENST00000495001.1	novel transcript (FLJ40653)
ENST00000370033.9	MANE_select
ENST00000370033.9	novel protein (FLJ13114)
ENST00000456149.1	3' EST evidence
ENST00000456149.1	QC splicing correct
ENST00000456149.1	novel protein
ENST00000470043.1	novel transcript
ENST00000311122.5	novel protein
ENST00000299238.7	Hermansky-Pudlak syndrome-6 protein (HPS6)
ENST00000299238.7	MANE_select
ENST00000448532.1	transcription elongation factor B (SIII), polypeptide 1 pseudogene
ENST00000454105.1	transcription elongation factor B (SIII) pseudogene
ENST00000673968.1	CAGE supported TSS
ENST00000673968.1	LIM domain binding 1
ENST00000673968.1	MANE_select
ENST00000361198.9	LIM domain binding 1
ENST00000461873.5	LIM domain binding 1
ENST00000278070.7	MANE_select
ENST00000278070.7	novel protein (KIAA0595)
ENST00000370012.1	novel protein
ENST00000489648.5	novel transcript
ENST00000462933.1	novel transcript
ENST00000495914.1	novel transcript
ENST00000605788.6	MANE_select
ENST00000605788.6	nucleolar and coiled-body phosphoprotein 1
ENST00000464969.6	QC splicing correct
ENST00000461421.5	nucleolar and coiled-body phosphoprotein 1
ENST00000477977.1	nucleolar and coiled-body phosphoprotein 1
ENST00000370005.4	MANE_select
ENST00000370002.8	CAGE supported TSS
ENST00000370002.8	LR annotation
ENST00000370002.8	MANE_select
ENST00000370002.8	QC splicing correct
ENST00000676513.1	SLRseq_align_id:3545813|asmbl_35978_PASA_cluster_3014
ENST00000676513.1	alternative 5' UTR
ENST00000676939.1	CCDS7533.1
ENST00000676939.1	continued from bA346A7.1 in Em:AL356420
ENST00000676939.1	golgi-specific brefeldin A resistance factor 1
ENST00000677947.1	alternative 5' UTR
ENST00000677947.1	intropolis_filtered
ENST00000678767.1	Snaptron_GTEX
ENST00000678767.1	intropolis_filtered
ENST00000679155.1	SLRseq_align_id:3545818|asmbl_35983_PASA_cluster_3014
ENST00000679155.1	intropolis_filtered
ENST00000679280.1	SLRseq_align_id:3545815|asmbl_35980_PASA_cluster_3014
ENST00000678036.1	SLRseq_align_align_id:3545821|asmbl_35986_PASA_cluster_3014
ENST00000678476.1	SLRseq_align_id:3545825|asmbl_35990_PASA_cluster_3014
ENST00000678504.1	SLRseq_align_id:3545823|asmbl_35988_PASA_cluster_3014
ENST00000677247.1	SLRseq_align_id:3545822|asmbl_35987_PASA_cluster_3014
ENST00000677655.1	SLRseq_align_id:3545826|asmbl_35991_PASA_cluster_3014
ENST00000369983.4	SLRseq_align_id:3545814|asmbl_35979_PASA_cluster_3014
ENST00000678351.1	SLRseq_align_id:3545817|asmbl_35982_PASA_cluster_3014
ENST00000678351.1	Snaptron_GTEX
ENST00000679238.1	SLRseq_align_id:3545827|asmbl_35992_
ENST00000679238.1	Snaptron_GTEX
ENST00000679238.1	intropolis_filtered
ENST00000677487.1	SLRseq_align_id:3545828|asmbl_35993_PASA_cluster_3014
ENST00000677506.1	SLRseq_align_id:3545824|asmbl_35989_PASA_cluster_3014
ENST00000678666.1	SLRseq_align_id:3545820|asmbl_35985_PASA_cluster_3014
ENST00000676560.1	SLRseq_align_id:3545829|asmbl_35994_PASA_cluster_3014
ENST00000677439.1	SLRseq_align_id:3545811|asmbl_35976_PASA_cluster_3014
ENST00000677439.1	intropolis_filtered
ENST00000677240.1	SLRseq_align_id:3545808|asmbl_35973_PASA_cluster_3014
ENST00000677618.1	SLRseq_align_id:3545810|asmbl_35975_PASA_cluster_3014
ENST00000679003.1	SLR_seq_align_id:3545834|asmbl_35999_PASA_cluster_3014
ENST00000678486.1	SLRseq_align_id:3545832|asmbl_35997_PASA_cluster_3014
ENST00000676807.1	pacbio_align_id:1292880|asmbl_12783
ENST00000676682.1	SLRseq_align_id:3545816|asmbl_35981_PASA_cluster_3014
ENST00000676993.1	mRNA:  BC117681.1
ENST00000678826.1	Snaptron_GTEX
ENST00000678826.1	intropolis_filtered
ENST00000678222.1	intropolis_filtered
ENST00000677431.1	intropolis_filtered
ENST00000676861.1	Snaptron_GTEX
ENST00000676861.1	intropolis_filtered
ENST00000677491.1	Snaptron_GTEX
ENST00000677491.1	intropolis_filtered
ENST00000677461.1	Snaptron_GTEX
ENST00000677461.1	intropolis_filtered
ENST00000677871.1	Snaptron_GTEX
ENST00000677871.1	intropolis_filtered
ENST00000678575.1	Snaptron_GTEX
ENST00000678575.1	intropolis_filtered
ENST00000677522.1	Snaptron_GTEX
ENST00000677522.1	intropolis_filtered
ENST00000678293.1	Snaptron_GTEX
ENST00000678293.1	intropolis_filtered
ENST00000679087.1	Snaptron_GTEX
ENST00000679087.1	intropolis_filtered
ENST00000677683.1	Snaptron_GTEX
ENST00000677683.1	intropolis_filtered
ENST00000677852.1	Snaptron_GTEX
ENST00000677852.1	intropolis_filtered
ENST00000678401.1	Snaptron_GTEX
ENST00000678401.1	intropolis_filtered
ENST00000677956.1	Snaptron_GTEX
ENST00000678840.1	intropolis_filtered
ENST00000677838.1	intropolis_filtered
ENST00000678126.1	Snaptron_GTEX
ENST00000679093.1	Snaptron_GTEX
ENST00000678924.1	Snaptron_GTEX
ENST00000476019.1	novel transcript
ENST00000678530.1	intropolis_filtered
ENST00000677662.1	Snaptron_GTEX
ENST00000677504.1	Snaptron_GTEX
ENST00000679139.1	intropolis_filtered
ENST00000677627.1	intropolis_filtered
ENST00000677017.1	intropolis_filtered
ENST00000678014.1	intropolis_filtered
ENST00000678426.1	intropolis_filtered
ENST00000678292.1	intropolis_filtered
ENST00000678806.1	Snaptron_GTEX
ENST00000677797.1	intropolis_filtered
ENST00000678215.1	intropolis_filtered
ENST00000679253.1	intropolis_filtered
ENST00000676474.1	intropolis_filtered
ENST00000676673.1	Snaptron_GTEX
ENST00000678941.1	intropolis_filtered
ENST00000676900.1	intropolis_filtered
ENST00000678127.1	intropolis_filtered
ENST00000676854.1	Snaptron_GTEX
ENST00000676854.1	intropolis_filtered
ENST00000679203.1	intropolis_filtered
ENST00000678585.1	SLRseq_align_id:3545819|asmbl_35984_PASA_cluster_3014
ENST00000679084.1	intropolis_filtered
ENST00000679305.1	Snaptron_GTEX
ENST00000677975.1	intropolis_filtered
ENST00000677629.1	intropolis_filtered
ENST00000678007.1	intropolis_filtered
ENST00000679298.1	intropolis_filtered
ENST00000678604.1	intropolis_filtered
ENST00000677917.1	intropolis_filtered
ENST00000678453.1	Snaptron_GTEX
ENST00000677607.1	SLRseq_align_id:3545833|asmbl_35998_PASA_cluster_3014
ENST00000678722.1	Snaptron_GTEX
ENST00000677098.1	Snaptron_GTEX
ENST00000676735.1	intropolis_filtered
ENST00000676482.1	intropolis_filtered
ENST00000676927.1	Snaptron_GTEX
ENST00000677776.1	intropolis_filtered
ENST00000678319.1	intropolis_filtered
ENST00000678344.1	intropolis_filtered
ENST00000678665.1	intropolis_filtered
ENST00000678571.1	intropolis_filtered
ENST00000678527.1	intropolis_filtered
ENST00000676985.1	intropolis_filtered
ENST00000678558.1	intropolis_filtered
ENST00000677100.1	intropolis_filtered
ENST00000678417.1	Snaptron_GTEX
ENST00000678514.1	Snaptron_GTEX
ENST00000677269.1	intropolis_filtered
ENST00000676877.1	Snaptron_GTEX
ENST00000676877.1	intropolis_filtered
ENST00000676558.1	Snaptron_GTEX
ENST00000677811.1	SLRseq_align_id:3545831|asmbl_35996_PASA_cluster_3014
ENST00000677642.1	Snaptron_GTEX
ENST00000679186.1	Snaptron_GTEX
ENST00000679013.1	Snaptron_GTEX
ENST00000678742.1	intropolis_filtered
ENST00000678157.1	Snaptron_GTEX
ENST00000678923.1	Snaptron_GTEX
ENST00000676561.1	intropolis_filtered
ENST00000679040.1	intropolis_filtered
ENST00000677235.1	intropolis_filtered
ENST00000676606.1	intropolis_filtered
ENST00000676934.1	Snaptron_GTEX
ENST00000679288.1	intropolis_filtered
ENST00000679317.1	Snaptron_GTEX
ENST00000677842.1	Snaptron_GTEX
ENST00000677842.1	intropolis_filtered
ENST00000677719.1	Snaptron_GTEX
ENST00000677719.1	intropolis_filtered
ENST00000678268.1	intropolis_filtered
ENST00000676802.1	Snaptron_GTEX
ENST00000679080.1	Snaptron_GTEX
ENST00000679080.1	intropolis_filtered
ENST00000601386.5	alternative 5' UTR
ENST00000428099.6	alternative 5' UTR
ENST00000369966.8	CAGE supported TSS
ENST00000369966.8	NAGNAG splice site
ENST00000652277.1	alternative 5' UTR
ENST00000189444.11	CAGE supported TSS
ENST00000661543.1	CAGE supported TSS
ENST00000661543.1	LR annotation
ENST00000661543.1	MANE_select
ENST00000661543.1	NAGNAG splice site
ENST00000020673.6	MANE_select
ENST00000020673.6	pleckstrin and Sec7 domain protein
ENST00000479172.5	pleckstrin and Sec7 domain protein
ENST00000473507.1	pleckstrin and Sec7 domain protein
ENST00000461698.5	CAGE supported TSS
ENST00000461698.5	pleckstrin and Sec7 domain protein
ENST00000488194.1	pleckstrin and Sec7 domain protein
ENST00000472685.5	pleckstrin and Sec7 domain protein
ENST00000492902.2	QC splicing correct
ENST00000432590.5	alternative 5' UTR
ENST00000369956.7	NP_077302.3
ENST00000369956.7	Swiss-Prot isoform Q9H469.2
ENST00000369956.7	novel protein
ENST00000440407.5	alternative 5' UTR
ENST00000425536.1	alternative 5' UTR
ENST00000465409.1	novel protein
ENST00000369937.5	MANE_select
ENST00000369937.5	novel protein
ENST00000477994.1	novel transcript
ENST00000473970.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000494270.7	Assembled from SLRseq reads (SRP049776)
ENST00000663480.1	Assembled from SLRseq reads (SRP049776)
ENST00000669625.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657934.1	Assembled from SLRseq reads (SRP049776)
ENST00000670059.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659211.1	Assembled from SLRseq reads (SRP049776)
ENST00000625129.1	MANE_select
ENST00000625129.1	QC splicing correct
ENST00000238936.8	MANE_select
ENST00000450947.2	QC splicing correct
ENST00000428200.1	QC splicing correct
ENST00000369905.9	ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
ENST00000369905.9	MANE_select
ENST00000470322.5	ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
ENST00000487599.1	QC splicing correct
ENST00000494549.1	ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
ENST00000480947.1	ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
ENST00000369902.8	MANE_select
ENST00000369902.8	continued from bA170J3.1.1 in Em:AL157386
ENST00000369902.8	continued from bA18I14.10.1 in Em:AL121928
ENST00000369902.8	suppressor of fused homolog (Drosophila)
ENST00000369899.6	continued from bA170J3.1.4 in Em:AL157386
ENST00000369899.6	continued from bA18I14.10.4 in Em:AL121928
ENST00000369899.6	suppressor of fused homolog (Drosophila)
ENST00000423559.2	continued from bA170J3.1.3 in Em:AL157386
ENST00000423559.2	suppressor of fused homolog (Drosophila)
ENST00000471000.1	continued from bA170J3.1.5 in Em:AL157386
ENST00000471000.1	suppressor of fused homolog (Drosophila)
ENST00000440453.1	60S ribosomal protein L23a (RPL23A) pseudogene
ENST00000607967.1	CAGE supported TSS
ENST00000643721.2	CAGE supported TSS
ENST00000643721.2	MANE_select
ENST00000642664.1	NAGNAG splice site
ENST00000462202.3	QC splicing correct
ENST00000487927.6	novel transcript
ENST00000260746.6	MANE_select
ENST00000602831.5	alternative 5' UTR
ENST00000602785.5	NMD likely if extended
ENST00000602764.5	alternative 3' UTR
ENST00000459894.6	QC splicing correct
ENST00000369893.10	MANE_select
ENST00000602868.1	alternative 5' UTR
ENST00000448841.7	MANE_select
ENST00000647664.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000369887.4	MANE_select
ENST00000489268.1	FLJ36787
ENST00000426243.2	unactive progesterone receptor, 23 kD (TEBP) pseudogene
ENST00000339834.10	MANE_select
ENST00000339834.10	NP_653192.2
ENST00000369883.3	alternative 3' UTR
ENST00000369880.8	MANE_select
ENST00000438729.1	ribosomal protein L22 (RPL22) pseudogene
ENST00000652934.1	Assembled from SLRseq reads (SRP049776)
ENST00000369878.9	MANE_select
ENST00000404739.8	5'-nucleotidase, cytosolic II
ENST00000404739.8	MANE_select
ENST00000404739.8	alternative 5' UTR
ENST00000676449.1	alternative 5' UTR
ENST00000676428.1	alternative 5' UTR
ENST00000675985.1	CAGE supported TSS
ENST00000675040.1	alternative 5' UTR
ENST00000674696.1	alternative 5' UTR
ENST00000675326.1	alternative 5' UTR
ENST00000421281.1	QC splicing correct
ENST00000461461.5	novel transcript
ENST00000458345.5	novel protein
ENST00000441178.2	MANE_select
ENST00000369849.9	MANE_select
ENST00000369847.4	MANE_select
ENST00000647574.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000369839.4	MANE_select
ENST00000369839.4	TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa
ENST00000369825.6	Extended 5' end using transcript assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000369825.6	alternative 5' UTR
ENST00000369811.5	alternative 5' UTR
ENST00000309579.7	DKFZp566D211
ENST00000309579.7	alternative 5' UTR
ENST00000337003.4	alternative 5' UTR
ENST00000369815.6	MANE_select
ENST00000649849.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000649849.1	NAGNAG splice site
ENST00000369797.8	MANE_select
ENST00000369797.8	programmed cell death 11
ENST00000493610.2	QC splicing correct
ENST00000471061.1	novel transcript
ENST00000648051.1	novel transcript
ENST00000466959.1	novel transcript
ENST00000478543.1	novel transcript
ENST00000260743.10	MANE_select
ENST00000369788.7	FLJ12133
ENST00000494180.1	novel transcript
ENST00000463878.1	novel transcript
ENST00000480642.1	novel transcript
ENST00000461631.1	novel transcript
ENST00000474797.1	novel transcript
ENST00000411906.1	putative novel transcript
ENST00000329905.6	MANE_select
ENST00000329905.6	novel protein
ENST00000369783.4	MANE_select
ENST00000369783.4	novel protein
ENST00000453753.5	novel transcript
ENST00000447820.1	novel transcript
ENST00000369780.8	neuralized-like (Drosophila)
ENST00000437579.1	neuralized-like (Drosophila)
ENST00000455386.1	neuralized-like (Drosophila)
ENST00000457120.1	putative novel transcript
ENST00000663302.1	Assembled from SLRseq reads (SRP049776)
ENST00000420222.1	FLJ31907
ENST00000224950.8	FLJ22559
ENST00000224950.8	MANE_select
ENST00000369764.1	FLJ22559
ENST00000466828.5	QC splicing correct
ENST00000369755.4	MANE_select
ENST00000335753.8	KIAA0204
ENST00000474260.1	novel transcript
ENST00000648076.2	CAGE supported TSS
ENST00000648076.2	LR annotation
ENST00000648076.2	MANE_select
ENST00000433822.1	alternative 3' UTR
ENST00000369727.4	MANE_select
ENST00000357060.8	MANE_select
ENST00000357060.8	genebuild_only_MANE
ENST00000457071.5	FLJ36006
ENST00000278064.7	FLJ22944
ENST00000369720.6	DKFZp434P078
ENST00000369719.2	FLJ22944
ENST00000470554.5	novel transcript
ENST00000493946.1	novel transcript
ENST00000369713.10	MANE_select
ENST00000369713.10	glutathione transferase omega 1 (GSTO1)
ENST00000445155.5	novel protein
ENST00000338595.7	MANE_select
ENST00000473401.5	QC splicing correct
ENST00000477078.2	QC splicing correct
ENST00000467629.1	QC splicing correct
ENST00000498052.1	novel transcript
ENST00000337478.3	MANE_select
ENST00000337478.3	novel protien (KIAA1754)
ENST00000358187.2	alternative 5' UTR
ENST00000358187.2	novel protien (KIAA1754)
ENST00000647721.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000647721.1	alternative 5' UTR
ENST00000458723.1	alternative 5' UTR
ENST00000458723.1	novel protien (KIAA1754)
ENST00000434792.1	novel transcript
ENST00000435434.1	putative novel transcript
ENST00000369704.8	MANE_select
ENST00000369704.8	novel protein
ENST00000369704.8	novel protein (FLJ35908)
ENST00000369703.1	novel protein
ENST00000447860.1	novel transcript
ENST00000450054.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000450054.2	putative novel transcript
ENST00000649412.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000369701.8	MANE_select
ENST00000369701.8	VPS10 domain receptor protein SORCS 3 (SORCS3)
ENST00000393176.2	QC splicing correct
ENST00000450091.1	peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene
ENST00000419975.1	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide (KCIP-1) (YWHAZ) pseudogene
ENST00000447757.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000447757.2	QC splicing correct
ENST00000666271.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663554.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660648.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000655779.1	Assembled from SLRseq reads (SRP049776)
ENST00000665336.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449761.5	QC splicing correct
ENST00000424701.1	QC splicing correct
ENST00000452286.1	novel transcript
ENST00000399415.2	RPL23A (60S ribosmal protein 23A) pseudogene
ENST00000263054.10	VPS10 domain receptor protein SORCS 1
ENST00000369698.5	QC splicing correct
ENST00000473866.1	novel transcript
ENST00000452214.5	VPS10 domain receptor protein SORCS 1
ENST00000478809.2	QC splicing correct
ENST00000486192.1	novel transcript
ENST00000472196.1	QC splicing correct
ENST00000662495.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659061.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665974.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425050.5	novel transcript
ENST00000654674.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656439.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000455109.2	unactive progesterone receptor, 23 kD (TEBP) pseudogene
ENST00000366253.2	novel transcript
ENST00000653086.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000421481.1	putative novel transcript
ENST00000431810.1	mitogen-activated protein kinase-activated protein kinase 5 (MAPKAPK5) pseudogene
ENST00000434943.1	repressor of estrogen receptor activity (BAP) (REA) pseudogene
ENST00000455606.1	basic transcription factor 3, like 1 (OPG, OCIF, HUMBTFB, TNFRSF11B) (BTF3L1) pseudogene
ENST00000429231.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000502935.6	MANE_select
ENST00000502935.6	NP_065116.3
ENST00000494499.1	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble (SAMP, XPNPEP, XPNPEPL)
ENST00000494564.5	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble (SAMP, XPNPEP, XPNPEPL)
ENST00000460055.5	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble (SAMP, XPNPEP, XPNPEPL)
ENST00000460523.5	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble (SAMP, XPNPEP, XPNPEPL)
ENST00000475123.1	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble (SAMP, XPNPEP, XPNPEPL)
ENST00000369657.5	QC splicing correct
ENST00000627565.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000625954.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000468251.5	adducin 3 (gamma)
ENST00000360162.7	adducin 3 (gamma)
ENST00000277900.12	adducin 3 (gamma)
ENST00000356080.9	MANE_select
ENST00000356080.9	adducin 3 (gamma)
ENST00000487085.5	adducin 3 (gamma)
ENST00000484622.5	adducin 3 (gamma)
ENST00000459738.5	adducin 3 (gamma)
ENST00000495661.5	adducin 3 (gamma)
ENST00000497125.5	adducin 3 (gamma)
ENST00000475954.5	adducin 3 (gamma)
ENST00000496517.5	adducin 3 (gamma)
ENST00000473669.5	adducin 3 (gamma)
ENST00000468345.1	adducin 3 (gamma)
ENST00000488104.1	adducin 3 (gamma)
ENST00000488837.1	adducin 3 (gamma)
ENST00000472568.5	adducin 3 (gamma)
ENST00000492162.5	adducin 3 (gamma)
ENST00000488799.5	adducin 3 (gamma)
ENST00000479805.1	adducin 3 (gamma)
ENST00000449481.1	small nuclear ribonucleoprotein polypeptide G (SNRPG) pseudogene
ENST00000332674.9	CAGE supported TSS
ENST00000332674.9	LR annotation
ENST00000332674.9	MANE_select
ENST00000332674.9	MAX interacting protein 1 (MAD2,MXD2)
ENST00000453116.5	MAX interacting protein 1 (MAD2,MXD2)
ENST00000361248.8	MAX interacting protein 1 (MAD2,MXD2)
ENST00000239007.11	MAX interacting protein 1 (MAD2,MXD2)
ENST00000460667.5	MAX interacting protein 1 (MAD2,MXD2)
ENST00000393134.5	MAX interacting protein 1 (MAD2,MXD2)
ENST00000651613.1	alternative 5' UTR
ENST00000651495.1	alternative 5' UTR
ENST00000650900.1	alternative 5' UTR
ENST00000652506.1	alternative 5' UTR
ENST00000651811.1	alternative 5' UTR
ENST00000651167.1	alternative 5' UTR
ENST00000651516.1	alternative 5' UTR
ENST00000651467.1	alternative 5' UTR
ENST00000651004.1	alternative 5' UTR
ENST00000651004.1	upstream ATG
ENST00000650843.1	upstream ATG
ENST00000651318.1	alternative 5' UTR
ENST00000650644.1	alternative 5' UTR
ENST00000650696.1	alternative 5' UTR
ENST00000651109.1	alternative 5' UTR
ENST00000651557.1	alternative 5' UTR
ENST00000650810.1	alternative 5' UTR
ENST00000650952.1	alternative 5' UTR
ENST00000484030.5	MAX interacting protein 1 (MAD2,MXD2)
ENST00000652028.1	alternative 5' UTR
ENST00000651866.1	alternative 5' UTR
ENST00000651848.1	alternative 5' UTR
ENST00000442296.5	MAX interacting protein 1 (MAD2,MXD2)
ENST00000652323.1	MAX interacting protein 1 (MAD2,MXD2)
ENST00000652323.1	alternative 5' UTR
ENST00000369612.1	MAX interacting protein 1 (MAD2,MXD2)
ENST00000451656.1	putative novel transcript
ENST00000397433.2	ribosomal protein L21 (RPL21) pseudogene
ENST00000369603.10	MANE_select
ENST00000460483.5	novel transcript
ENST00000471297.1	novel transcript
ENST00000477763.1	novel transcript
ENST00000609514.1	CAGE supported TSS
ENST00000666621.1	Assembled from SLRseq reads (SRP049776)
ENST00000428894.1	high-mobility group box 3 (HMGB3) pseudogene
ENST00000369583.4	MANE_select
ENST00000468749.1	dual specificity phosphatase 5 (HVH3)
ENST00000446943.1	ribosomal protein L7 (RPL7) pseudogene
ENST00000361804.5	MANE_select
ENST00000361804.5	QC splicing correct
ENST00000361804.5	chondroitin sulfate proteoglycan 6 (bamacan)(BAM, HCAP, SMC3, SMC3L1)
ENST00000361804.5	non canonical U12
ENST00000462899.1	chondroitin sulfate proteoglycan 6 (bamacan)(BAM, HCAP, SMC3, SMC3L1)
ENST00000369519.4	MANE_select
ENST00000369519.4	QC splicing correct
ENST00000416249.1	QC splicing correct
ENST00000420367.1	putative novel transcript
ENST00000467574.5	programmed cell death 4 (neoplastic transformation inhibitor)(H731, MGC33046, MGC33047)
ENST00000483670.5	programmed cell death 4 (neoplastic transformation inhibitor)(H731, MGC33046, MGC33047)
ENST00000280154.12	MANE_select
ENST00000280154.12	programmed cell death 4 (neoplastic transformation inhibitor)(H731, MGC33046, MGC33047)
ENST00000444997.1	programmed cell death 4 (neoplastic transformation inhibitor)(H731, MGC33046, MGC33047)
ENST00000492932.5	programmed cell death 4 (neoplastic transformation inhibitor)(H731, MGC33046, MGC33047)
ENST00000481353.5	programmed cell death 4 (neoplastic transformation inhibitor)(H731, MGC33046, MGC33047)
ENST00000462577.5	programmed cell death 4 (neoplastic transformation inhibitor)(H731, MGC33046, MGC33047)
ENST00000489049.5	programmed cell death 4 (neoplastic transformation inhibitor)(H731, MGC33046, MGC33047)
ENST00000483595.1	programmed cell death 4 (neoplastic transformation inhibitor)(H731, MGC33046, MGC33047)
ENST00000498367.1	programmed cell death 4 (neoplastic transformation inhibitor)(H731, MGC33046, MGC33047)
ENST00000448814.7	CAGE supported TSS
ENST00000448814.7	LR annotation
ENST00000448814.7	MANE_select
ENST00000652396.1	alternative 5' UTR
ENST00000651952.1	alternative 5' UTR
ENST00000652400.1	alternative 5' UTR
ENST00000652043.1	alternative 5' UTR
ENST00000605742.5	alternative 5' UTR
ENST00000480155.1	soc-2 suppressor of clear homolog (C. elegans)(SOC2, SUR8, SOC-2, SUR-8, KIAA0862, SIAA0862)
ENST00000489390.1	soc-2 suppressor of clear homolog (C. elegans)(SOC2, SUR8, SOC-2, SUR-8, KIAA0862, SIAA0862)
ENST00000369452.9	MANE_select
ENST00000369452.9	soc-2 suppressor of clear homolog (C. elegans)(SOC2, SUR8, SOC-2, SUR-8, KIAA0862, SIAA0862)
ENST00000489783.1	soc-2 suppressor of clear homolog (C. elegans)(SOC2, SUR8, SOC-2, SUR-8, KIAA0862, SIAA0862)
ENST00000451838.1	soc-2 suppressor of clear homolog (C. elegans)(SOC2, SUR8, SOC-2, SUR-8, KIAA0862, SIAA0862)
ENST00000497305.1	soc-2 suppressor of clear homolog (C. elegans)(SOC2, SUR8, SOC-2, SUR-8, KIAA0862, SIAA0862)
ENST00000280155.4	MANE_select
ENST00000424331.1	HSPC023 protein (HSPC023) pseudogene
ENST00000441962.1	novel pseudogene similar to part of FLJ10648
ENST00000421597.1	putative novel transcript
ENST00000431996.1	ribosomal protein S6 (RPS6) pseudogene
ENST00000656217.1	Assembled from SLRseq reads (SRP049776)
ENST00000348367.9	MANE_select
ENST00000348367.9	glycerol 3-phosphate acyltransferase, mitochondrial (KIAA1560) (GPAM, MGC26846)
ENST00000369425.5	glycerol 3-phosphate acyltransferase, mitochondrial (KIAA1560) (GPAM, MGC26846)
ENST00000480130.5	novel transcript
ENST00000498541.1	novel transcript
ENST00000646139.2	CAGE supported TSS
ENST00000646139.2	LR annotation
ENST00000646139.2	MANE_select
ENST00000479705.5	guanylate cyclase type protein pseudogene
ENST00000354655.8	alternative 5' UTR
ENST00000354655.8	alternatively spliced 5' UTR shares CDS with bA324O2.2.1
ENST00000354655.8	fatty-acid-Coenzyme A ligase, long-chain 5
ENST00000479936.1	fatty-acid-Coenzyme A ligase, long-chain 5
ENST00000479936.1	this variant and one or more of variant fragments .2.4 and .2.5 could be part of a single variant
ENST00000354273.4	fatty-acid-Coenzyme A ligase, long-chain 5
ENST00000495539.5	fatty-acid-Coenzyme A ligase, long-chain 5
ENST00000495539.5	this variant and one or more of variant fragments .2.3 and .2.5 could be part of a single variant
ENST00000467340.1	fatty-acid-Coenzyme A ligase, long-chain 5
ENST00000496328.1	fatty-acid-Coenzyme A ligase, long-chain 5
ENST00000496328.1	this variant and one or more of variant fragments .2.3 and .2.4 could be part of a single variant
ENST00000669015.1	Assembled from SLRseq reads (SRP049776)
ENST00000369405.7	MANE_select
ENST00000369405.7	zinc finger, DHHC domain containing 6
ENST00000369404.3	zinc finger, DHHC domain containing 6
ENST00000482410.5	zinc finger, DHHC domain containing 6
ENST00000471035.1	zinc finger, DHHC domain containing 6
ENST00000483122.1	vesicle transport through interaction with t-SNAREs homolog 1A (yeast), variant 2, FLJ38157
ENST00000472892.1	vesicle transport through interaction with t-SNAREs homolog 1A (yeast)
ENST00000393077.3	MANE_select
ENST00000489142.5	vesicle transport through interaction with t-SNAREs homolog 1A (yeast)
ENST00000496445.5	vesicle transport through interaction with t-SNAREs homolog 1A (yeast)
ENST00000494728.5	vesicle transport through interaction with t-SNAREs homolog 1A (yeast)
ENST00000489357.5	vesicle transport through interaction with t-SNAREs homolog 1A (yeast)
ENST00000480057.1	vesicle transport through interaction with t-SNAREs homolog 1A (yeast)
ENST00000430685.1	pseudogene similar to part of eukaryotic translation elongation factor 1 alpha 1 (EEF1A1)
ENST00000443652.1	novel transcript
ENST00000648389.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000428766.2	QC splicing correct
ENST00000428766.2	novel transcript
ENST00000627217.3	MANE_select
ENST00000355717.9	transcription factor 7-like 2 (T-cell specific, HMG-box)
ENST00000346198.5	transcription factor 7-like 2 (T-cell specific, HMG-box)
ENST00000277945.11	transcription factor 7-like 2 (T-cell specific, HMG-box)
ENST00000369386.5	transcription factor 7-like 2 (T-cell specific, HMG-box)
ENST00000466338.5	transcription factor 7-like 2 (T-cell specific, HMG-box)
ENST00000470254.1	QC splicing correct
ENST00000480888.1	transcription factor 7-like 2 (T-cell specific, HMG-box)
ENST00000471569.1	transcription factor 7-like 2 (T-cell specific, HMG-box)
ENST00000494353.1	transcription factor 7-like 2 (T-cell specific, HMG-box)
ENST00000369391.3	putative novel transcript
ENST00000420976.1	ribosomal protein S15 (RPS15) pseudogene
ENST00000658845.1	Assembled from SLRseq reads (SRP049776)
ENST00000415988.1	FK506 binding protein 1B (FKBP1B) pseudogene
ENST00000351270.4	MANE_select
ENST00000351270.4	novel protein similar to HGF activator (HGFAC)
ENST00000460714.1	QC splicing correct
ENST00000359988.4	MANE_select
ENST00000359988.4	QC splicing correct
ENST00000369360.7	QC splicing correct
ENST00000429617.5	caspase 7, apoptosis-related cysteine protease
ENST00000369331.8	QC splicing correct
ENST00000369331.8	caspase 7, apoptosis-related cysteine protease
ENST00000345633.8	caspase 7, apoptosis-related cysteine protease
ENST00000369318.8	MANE_select
ENST00000369318.8	caspase 7, apoptosis-related cysteine protease
ENST00000369315.5	caspase 7, apoptosis-related cysteine protease
ENST00000468790.1	caspase 7, apoptosis-related cysteine protease
ENST00000448834.1	novel transcript
ENST00000369310.7	novel protein
ENST00000354462.7	novel protein (FLJ23537 version 2)
ENST00000361384.7	DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae)
ENST00000361384.7	MANE_select
ENST00000369305.1	DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae)
ENST00000476112.1	DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae)
ENST00000369301.3	MANE_select
ENST00000369301.3	novel NHL repeat domain containing protein (FLJ33312)
ENST00000369301.3	novel NHL repeat domain containing protein (FLJ33312, FLJ25621)
ENST00000369301.3	novel NHL repeat domain containing protein (FLJ33312, FLJ25621, DKFZp313F0131, FLJ30653, FLJ36994, FLJ20147)
ENST00000468890.1	putative novel transcript
ENST00000658044.1	Assembled from RACEseq reads
ENST00000369295.4	MANE_select
ENST00000369295.4	adrenergic, beta-1-, receptor
ENST00000648887.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000440070.1	ubiquitin-conjugating enzyme E2 variant 1 (UBE2V1) pseudogene
ENST00000369287.8	MANE_select
ENST00000648613.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648613.1	alternative 5' UTR
ENST00000428953.1	QC splicing correct
ENST00000497592.1	CTCL tumor antigen L14-2
ENST00000490661.1	CTCL tumor antigen L14-2
ENST00000369285.7	CTCL tumor antigen L14-2 (FLJ35301)
ENST00000369285.7	alternative 5' UTR
ENST00000369286.1	CTCL tumor antigen L14-2
ENST00000369282.5	tudor domain containing 1
ENST00000369280.1	tudor domain containing 1
ENST00000392982.8	MANE_select
ENST00000392982.8	NP_001258975.1
ENST00000454983.1	serine/threonine kinase 6 (STK6) pseudogene
ENST00000304129.9	MANE_select
ENST00000304129.9	novel protein (FLJ14564)
ENST00000369271.7	novel protein (FLJ14564)
ENST00000491814.1	novel transcript (KIAA1914)
ENST00000486300.1	novel transcript
ENST00000419268.1	novel protein
ENST00000483496.1	novel transcript
ENST00000485570.1	QC splicing correct
ENST00000440467.5	actin binding LIM protein 1
ENST00000428430.1	actin binding LIM protein 1
ENST00000466400.1	actin binding LIM protein 1
ENST00000477638.1	actin binding LIM protein 1
ENST00000412744.1	pseudogene similar to part of small nuclear ribonucleoprotein polypeptide B (SNRPB2)
ENST00000436932.1	novel transcript
ENST00000652900.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669679.1	Assembled from SLRseq reads (SRP049776)
ENST00000670638.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661356.1	Assembled from SLRseq reads (SRP049776)
ENST00000669071.1	Assembled from SLRseq reads (SRP049776)
ENST00000663035.1	Assembled from SLRseq reads (SRP049776)
ENST00000659920.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650219.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000400856.2	TAF9-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa (TAF9L) pseudogene
ENST00000369250.7	novel protein (KIAA1600)
ENST00000369246.1	novel protein
ENST00000369248.9	MANE_select
ENST00000369248.9	novel protein (KIAA1600)
ENST00000411414.1	novel protein (KIAA1600)
ENST00000414329.1	ribosomal protein L15 (RPL15) pseudogene
ENST00000298746.5	MANE_select
ENST00000298746.5	TruB pseudouridine (psi) synthase homolog 1 (E. coli)
ENST00000485065.1	TruB pseudouridine (psi) synthase homolog 1 (E. coli)
ENST00000433085.1	putative novel transcript
ENST00000616894.1	QC splicing correct
ENST00000355044.8	MANE_select
ENST00000527407.5	QC splicing correct
ENST00000650603.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648967.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000603150.1	weak homology
ENST00000355422.11	MANE_select
ENST00000355422.11	alternative 5' UTR
ENST00000369234.4	alternative 5' UTR
ENST00000490345.1	GDNF family receptor alpha 1
ENST00000648277.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000333254.4	MANE_select
ENST00000333254.4	novel protein
ENST00000451124.1	small nuclear ribonucleoprotein polypeptide G (SNRPG) pseudogene
ENST00000369230.4	MANE_select
ENST00000369230.4	novel protein (LOC119548)
ENST00000449709.1	HMG-1 pseudogene
ENST00000369221.2	MANE_select
ENST00000369221.2	pancreatic lipase
ENST00000470562.1	pancreatic lipase
ENST00000439233.1	pseudogene similar to part of pancreatic lipase (PNLIP)
ENST00000531984.5	alternative 5' UTR
ENST00000482159.5	pancreatic lipase-related protein 1
ENST00000358834.9	MANE_select
ENST00000528052.5	alternative 5' UTR
ENST00000471549.5	alternative 5' UTR
ENST00000534537.5	QC splicing correct
ENST00000588184.2	MANE_select
ENST00000369210.7	novel protein (MGC33547)
ENST00000467153.5	novel transcript
ENST00000657747.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000433600.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000433600.2	novel transcript
ENST00000369209.8	MANE_select
ENST00000369209.8	novel protein (KIAA0417)
ENST00000674245.1	Assembled from SLRseq reads (SRP049776)
ENST00000674291.1	Assembled from SLRseq reads (SRP049776)
ENST00000674389.1	Assembled from SLRseq reads (SRP049776)
ENST00000674473.1	Assembled from SLRseq reads (SRP049776)
ENST00000674223.1	Assembled from SLRseq reads (SRP049776)
ENST00000674375.1	Assembled from SLRseq reads (SRP049776)
ENST00000674372.1	Assembled from SLRseq reads (SRP049776)
ENST00000674491.1	Assembled from SLRseq reads (SRP049776)
ENST00000674344.1	Assembled from SLRseq reads (SRP049776)
ENST00000674459.1	Assembled from SLRseq reads (SRP049776)
ENST00000674459.1	alternative 5' UTR
ENST00000674394.1	Assembled from SLRseq reads (SRP049776)
ENST00000674347.1	Assembled from SLRseq reads (SRP049776)
ENST00000674205.1	Assembled from SLRseq reads (SRP049776)
ENST00000674505.1	Assembled from SLRseq reads (SRP049776)
ENST00000674167.1	Assembled from SLRseq reads (SRP049776)
ENST00000674167.1	alternative 5' UTR
ENST00000674401.1	Assembled from SLRseq reads (SRP049776)
ENST00000674197.1	Assembled from SLRseq reads (SRP049776)
ENST00000674431.1	Assembled from SLRseq reads (SRP049776)
ENST00000674468.1	Assembled from SLRseq reads (SRP049776)
ENST00000481291.2	Assembled from SLRseq reads (SRP049776)
ENST00000674267.1	Assembled from SLRseq reads (SRP049776)
ENST00000674455.1	Assembled from SLRseq reads (SRP049776)
ENST00000674326.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000674400.1	Assembled from SLRseq reads (SRP049776)
ENST00000437011.1	ribosomal protein L5 (RPL5) pseudogene
ENST00000341276.11	MANE_select
ENST00000341276.11	QC splicing correct
ENST00000409522.5	QC splicing correct
ENST00000369207.3	QC splicing correct
ENST00000355371.9	MANE_select
ENST00000355371.9	genebuild_only_MANE
ENST00000497044.5	novel transcript, variant 2 (FLJ34259)
ENST00000490615.1	novel transcript
ENST00000669057.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000451232.1	novel pseudogene
ENST00000369206.6	MANE_select
ENST00000369206.6	QC splicing correct
ENST00000654523.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671486.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662965.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669464.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000419373.2	QC splicing correct
ENST00000654111.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452430.1	ribosomal protein L12 (RPL12) pseudogene
ENST00000334549.1	MANE_select
ENST00000425264.1	novel transcript
ENST00000497497.1	solute carrier family 18 (vesicular monoamine), member 2
ENST00000644641.2	CAGE supported TSS
ENST00000644641.2	LR annotation
ENST00000644641.2	MANE_select
ENST00000334464.7	MANE_select
ENST00000334464.7	novel protein (LOC118987)
ENST00000482496.5	novel transcript
ENST00000489302.5	novel transcript
ENST00000489491.1	novel transcript
ENST00000412075.6	novel transcript
ENST00000450314.6	QC splicing correct
ENST00000424371.2	QC splicing correct
ENST00000440007.6	Assembled from SLRseq reads (SRP049776)
ENST00000656309.1	Assembled from SLRseq reads (SRP049776)
ENST00000423419.1	novel transcript
ENST00000553456.5	MANE_select
ENST00000450247.1	novel transcript
ENST00000669261.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655405.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658789.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656183.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445647.1	putative novel transcript
ENST00000665056.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656257.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669169.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000575236.1	QC splicing correct
ENST00000665300.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664967.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000355624.8	MANE_select
ENST00000369199.5	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000476207.1	QC splicing correct
ENST00000417968.4	nested 454 RNA-Seq supported
ENST00000414722.5	QC splicing correct
ENST00000665675.1	Assembled from SLRseq reads (SRP049776)
ENST00000665675.1	novel transcript
ENST00000454781.6	Assembled from SLRseq reads (SRP049776)
ENST00000454857.6	Assembled from SLRseq reads (SRP049776)
ENST00000439517.2	Assembled from SLRseq reads (SRP049776)
ENST00000657543.1	Assembled from SLRseq reads (SRP049776)
ENST00000655184.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000431695.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000431695.6	novel transcript
ENST00000653445.1	Assembled from SLRseq reads (SRP049776)
ENST00000669733.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436975.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000436975.6	novel transcript
ENST00000652828.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658345.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000413810.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000436430.1	QC splicing correct
ENST00000671611.1	Assembled from SLRseq reads (SRP049776)
ENST00000369183.9	MANE_select
ENST00000452252.1	QC splicing correct
ENST00000491416.5	novel transcript
ENST00000470476.5	novel protein
ENST00000469758.5	novel transcript
ENST00000369172.8	CCDS7605.1
ENST00000369172.8	alternative 5' UTR
ENST00000369172.8	alternatively spliced in 5' UTR, shares CDS with bA319I23.1.1
ENST00000369172.8	novel protein
ENST00000369170.4	alternative 5' UTR
ENST00000369170.4	alternatively spliced in 5' UTR, shares partial CDS with bA319I23.1.1
ENST00000369170.4	novel protein
ENST00000487269.1	novel transcript
ENST00000664512.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000453236.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000453236.2	novel transcript
ENST00000670629.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000415417.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000415417.6	novel transcript
ENST00000411666.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000411666.6	novel transcript
ENST00000668223.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445161.5	novel transcript
ENST00000657224.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449385.1	pseudogene similar to part of solute carrier family 25, (mitochondrial carrier), member 18 (SLC25A18)
ENST00000239032.4	MANE_select
ENST00000636925.1	alternative 5' UTR
ENST00000416399.2	translocase of outer mitochondrial membrane 22 homolog (yeast) (TOM22) (TOMM22) pseudogene
ENST00000369151.8	MANE_select
ENST00000489169.1	novel transcript
ENST00000477583.1	novel transcript
ENST00000663084.1	Assembled from SLRseq reads (SRP049776)
ENST00000437838.1	putative novel transcript
ENST00000420302.1	ribosomal protein L17 (RPL17) pseudogene
ENST00000394996.2	pseudogene similar to part of lactate dehydrogenase A (LDH1) (LDHD)
ENST00000425699.3	MANE_select
ENST00000340087.5	nanos 1 (LOC340719)
ENST00000369144.8	MANE_select
ENST00000462527.2	QC splicing correct
ENST00000472379.2	novel transcript
ENST00000497903.5	novel transcript
ENST00000493766.5	novel transcript
ENST00000487888.5	novel transcript
ENST00000361432.3	MANE_select
ENST00000361432.3	novel protein similar to uncharacterized hypothalamus protein HT011
ENST00000448258.6	novel transcript
ENST00000648560.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648560.1	upstream uORF
ENST00000489988.5	novel transcript
ENST00000498549.2	novel transcript
ENST00000462327.1	QC splicing correct
ENST00000489936.1	novel transcript
ENST00000490417.6	novel protein
ENST00000355697.7	MANE_select
ENST00000355697.7	novel protein
ENST00000484960.5	novel transcript
ENST00000461438.5	novel protein
ENST00000369131.8	novel protein
ENST00000466218.5	novel transcript
ENST00000419372.5	novel protein
ENST00000462913.1	novel transcript
ENST00000298510.4	MANE_select
ENST00000298510.4	peroxiredoxin 3 (AOP1, MER5, AOP-1, SP-22)
ENST00000494433.1	peroxiredoxin 3 (AOP1, MER5, AOP-1, SP-22)
ENST00000463322.1	peroxiredoxin 3 (AOP1, MER5, AOP-1, SP-22)
ENST00000392870.3	MANE_select
ENST00000421206.1	QC splicing correct
ENST00000457948.3	QC splicing correct
ENST00000369103.3	MANE_select
ENST00000369103.3	regulator of G-protein signalling 10
ENST00000369101.7	regulator of G-protein signalling 10
ENST00000469575.1	regulator of G-protein signalling 10
ENST00000473563.1	regulator of G-protein signalling 10
ENST00000369093.6	TIA1 cytotoxic granule-associated RNA binding protein-like 1
ENST00000436547.7	MANE_select
ENST00000436547.7	TIA1 cytotoxic granule-associated RNA binding protein-like 1
ENST00000463089.6	QC splicing correct
ENST00000489822.5	TIA1 cytotoxic granule-associated RNA binding protein-like 1
ENST00000497671.5	TIA1 cytotoxic granule-associated RNA binding protein-like 1
ENST00000470781.5	TIA1 cytotoxic granule-associated RNA binding protein-like 1
ENST00000369087.5	TIA1 cytotoxic granule-associated RNA binding protein-like 1
ENST00000495821.1	TIA1 cytotoxic granule-associated RNA binding protein-like 1
ENST00000470635.1	TIA1 cytotoxic granule-associated RNA binding protein-like 1
ENST00000412524.5	TIA1 cytotoxic granule-associated RNA binding protein-like 1
ENST00000369086.1	TIA1 cytotoxic granule-associated RNA binding protein-like 1
ENST00000462373.1	TIA1 cytotoxic granule-associated RNA binding protein-like 1
ENST00000479729.1	TIA1 cytotoxic granule-associated RNA binding protein-like 1
ENST00000231383.8	pseudogene similar to RAD1 homolog isoform 2
ENST00000454541.1	ribosomal protein S8 (RPS8) pseudogene
ENST00000369085.8	BCL2-associated athanogene 3
ENST00000369085.8	MANE_select
ENST00000450186.1	BCL2-associated athanogene 3
ENST00000441872.2	thioredoxin 1 pseudogene 2 (LOC93202)
ENST00000650623.2	CAGE supported TSS
ENST00000650623.2	LR annotation
ENST00000650623.2	MANE_select
ENST00000369081.3	Sac domain-containing inositol phosphatase 2
ENST00000649454.1	CAGE supported TSS
ENST00000649957.1	CAGE supported TSS
ENST00000647699.1	CAGE supported TSS
ENST00000650409.1	CAGE supported TSS
ENST00000650409.1	LR annotation
ENST00000490818.1	Sac domain-containing inositol phosphatase 2
ENST00000360003.7	novel protein (FLJ13081)
ENST00000369077.4	MANE_select
ENST00000369077.4	novel protein (FLJ13081)
ENST00000466047.5	novel protein (FLJ13081)
ENST00000495407.1	novel protein (FLJ13081)
ENST00000369075.8	MANE_select
ENST00000369075.8	SEC23 interacting protein
ENST00000470478.1	SEC23 interacting protein
ENST00000442952.1	SEC23 interacting protein
ENST00000446561.1	SEC23 interacting protein
ENST00000462222.1	SEC23 interacting protein
ENST00000475542.1	SEC23 interacting protein
ENST00000483890.1	SEC23 interacting protein
ENST00000318548.6	nascent-polypeptide-associated complex alpha polypeptide (NACA) pseudogene
ENST00000425391.1	ribosomal protein L3 (RPL3) pseudogene
ENST00000495531.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000447093.1	spermatogenesis associated 7 (SPATA7) pseudogene
ENST00000398250.6	MANE_select
ENST00000369073.3	QC splicing correct
ENST00000496437.1	novel transcript
ENST00000369071.4	novel protein (LOC283088)
ENST00000659883.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663713.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665554.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655330.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667515.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000617518.2	Assembled from RACEseq reads
ENST00000617518.2	Assembled from SLRseq reads (SRP049776)
ENST00000613658.2	Assembled from SLRseq reads (SRP049776)
ENST00000657662.1	Assembled from SLRseq reads (SRP049776)
ENST00000659044.1	Assembled from SLRseq reads (SRP049776)
ENST00000661212.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661416.1	Assembled from SLRseq reads (SRP049776)
ENST00000661416.1	novel transcript
ENST00000456120.6	Assembled from SLRseq reads (SRP049776)
ENST00000648536.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000630905.3	Assembled from SLRseq reads (SRP049776)
ENST00000451706.3	QC splicing correct
ENST00000661709.1	Assembled from SLRseq reads (SRP049776)
ENST00000610133.1	nested 454 RNA-Seq supported
ENST00000608667.1	nested 454 RNA-Seq supported
ENST00000663233.1	Assembled from SLRseq reads (SRP049776)
ENST00000605543.5	non canonical TEC
ENST00000263461.11	MANE_select
ENST00000263461.11	WD repeat domain 11
ENST00000263461.11	non canonical U12
ENST00000470052.5	WD repeat domain 11
ENST00000497136.6	WD repeat domain 11
ENST00000497136.6	non canonical U12
ENST00000462529.2	WD repeat domain 11
ENST00000604509.5	non canonical U12
ENST00000478567.5	WD repeat domain 11
ENST00000414774.1	putative novel transcript
ENST00000433839.1	ribosomal protein L19 (RPL19) pseudogene
ENST00000429809.1	putative novel transcript
ENST00000358487.10	MANE_select
ENST00000358487.10	non canonical conserved
ENST00000358487.10	upstream_ATG-19
ENST00000478859.5	fibroblast growth factor receptor 2
ENST00000478859.5	non canonical conserved
ENST00000356226.8	upstream_ATG-19
ENST00000369060.8	upstream_ATG-19
ENST00000604236.5	non canonical conserved
ENST00000369059.5	non canonical conserved
ENST00000369059.5	upstream_ATG-19
ENST00000467584.1	fibroblast growth factor receptor 2
ENST00000429361.5	QC splicing correct
ENST00000429361.5	non canonical conserved
ENST00000346997.6	fibroblast growth factor receptor 2
ENST00000457416.6	non canonical conserved
ENST00000457416.6	upstream_ATG-19
ENST00000360144.7	non canonical conserved
ENST00000360144.7	upstream_ATG-19
ENST00000369056.5	non canonical conserved
ENST00000369058.7	non canonical conserved
ENST00000369058.7	upstream_ATG-19
ENST00000336553.10	upstream_ATG-19
ENST00000463870.5	fibroblast growth factor receptor 2
ENST00000490349.5	fibroblast growth factor receptor 2
ENST00000359354.6	upstream_ATG-19
ENST00000359354.6	variant 14
ENST00000491475.1	fibroblast growth factor receptor 2
ENST00000491111.1	fibroblast growth factor receptor 2
ENST00000434988.1	putative novel transcript
ENST00000447943.1	novel transcript
ENST00000369043.8	CAGE supported TSS
ENST00000369043.8	arginyltransferase 1
ENST00000224652.11	arginyltransferase 1
ENST00000540606.6	arginyltransferase 1
ENST00000369040.8	arginyltransferase 1
ENST00000485281.1	arginyltransferase 1
ENST00000437593.1	putative novel transcript
ENST00000459911.5	putative novel transcript
ENST00000369023.8	MANE_select
ENST00000369023.8	novel protein (FLJ20003)
ENST00000489266.5	novel transcript
ENST00000468209.5	novel transcript
ENST00000483541.1	novel transcript
ENST00000369017.5	novel protein
ENST00000464321.5	novel transcript
ENST00000481320.5	novel transcript
ENST00000472431.1	novel transcript
ENST00000465189.1	novel transcript
ENST00000369005.6	MANE_select
ENST00000492689.5	transforming, acidic coiled-coil containing protein 2 (AZU-1)
ENST00000498721.1	transforming, acidic coiled-coil containing protein 2 (AZU-1)
ENST00000489754.1	transforming, acidic coiled-coil containing protein 2 (AZU-1)
ENST00000491540.1	QC splicing correct
ENST00000493951.5	QC splicing correct
ENST00000492237.5	QC splicing correct
ENST00000360561.7	NP_996742.1
ENST00000368999.5	transforming, acidic coiled-coil containing protein 2 (AZU-1)
ENST00000260733.7	NP_008928.1
ENST00000368997.7	This was originally made as coding, but  swissprot sequence O95359 isform 3 has been withdrawn
ENST00000440764.2	transforming, acidic coiled-coil containing protein 2 (AZU-1)
ENST00000496913.6	transforming, acidic coiled-coil containing protein 2 (AZU-1)
ENST00000490979.1	transforming, acidic coiled-coil containing protein 2 (AZU-1)
ENST00000465600.1	transforming, acidic coiled-coil containing protein 2 (AZU-1)
ENST00000647670.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000649237.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000657587.1	Assembled from SLRseq reads (SRP049776)
ENST00000661076.1	Assembled from SLRseq reads (SRP049776)
ENST00000658246.1	Assembled from SLRseq reads (SRP049776)
ENST00000657757.1	Assembled from SLRseq reads (SRP049776)
ENST00000260723.6	MANE_select
ENST00000463663.6	alternative 5' UTR
ENST00000392799.7	alternative 5' UTR
ENST00000481451.1	novel transcript
ENST00000528446.1	MANE_select
ENST00000368984.8	MANE_select
ENST00000420892.1	protease, serine, 11 (IGF binding)
ENST00000666315.1	NAGNAG splice site
ENST00000666315.1	NP_001307573.1
ENST00000338354.10	MANE_select
ENST00000338354.10	confirm experimentally
ENST00000664692.1	confirm experimentally
ENST00000653442.1	confirm experimentally
ENST00000664974.1	confirm experimentally
ENST00000663623.1	NMD likely if extended
ENST00000432000.5	QC splicing correct
ENST00000329446.5	MANE_select
ENST00000329446.5	novel protein
ENST00000368899.5	alternative 5' UTR
ENST00000368899.5	alternatively spliced 5' UTR; shares CDS with bA107C16.2.2 and bA107C16.2.3
ENST00000368899.5	estrogen regulated gene 1 (ERG-1)(UO-44)
ENST00000392790.6	CAGE supported TSS
ENST00000392790.6	MANE_select
ENST00000368901.5	alternative 5' UTR
ENST00000368901.5	alternatively spliced 5' UTR; shares CDS with bA107C16.2.3 and bA107C16.2.5
ENST00000368901.5	estrogen regulated gene 1 (ERG-1)(UO-44)
ENST00000368900.5	alternative 5' UTR
ENST00000368900.5	alternatively spliced 5' UTR; shares CDS with bA107C16.2.2 and bA107C16.2.5
ENST00000368900.5	estrogen regulated gene 1 (ERG-1)(UO-44)
ENST00000368898.8	MANE_select
ENST00000368898.8	novel protein (MGC45962)
ENST00000462859.5	novel transcript
ENST00000368896.1	novel protein (MGC45962)
ENST00000489000.1	novel transcript
ENST00000368894.2	MANE_select
ENST00000368894.2	novel protein
ENST00000481909.2	MANE_select
ENST00000481909.2	novel protein (FLJ13490)
ENST00000368891.9	novel transcript
ENST00000462191.1	putative novel transcript
ENST00000470158.1	novel transcript
ENST00000465232.5	QC splicing correct
ENST00000368887.7	novel protein (MGC35392)
ENST00000406217.8	MANE_select
ENST00000406217.8	novel protein (MGC35392)
ENST00000497219.5	novel transcript
ENST00000493461.1	novel transcript
ENST00000483755.5	QC splicing correct
ENST00000496079.1	novel transcript
ENST00000368886.10	CAGE supported TSS
ENST00000368886.10	LR annotation
ENST00000368886.10	MANE_select
ENST00000469821.1	novel transcript
ENST00000479103.1	novel transcript
ENST00000358776.7	MANE_select
ENST00000358776.7	acyl-Coenzyme A dehydrogenase, short/branched chain (SBCAD)
ENST00000411816.2	acyl-Coenzyme A dehydrogenase, short/branched chain (SBCAD)
ENST00000357878.7	MANE_select
ENST00000339992.4	MANE_select
ENST00000368859.6	QC splicing correct
ENST00000368865.9	MANE_select
ENST00000368858.9	BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast) (BUB3L)
ENST00000407911.2	BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast) (BUB3L)
ENST00000481952.1	BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast) (BUB3L)
ENST00000469206.1	ribosomal protein S26 (RPS26) pseudogene
ENST00000448347.5	QC splicing correct
ENST00000656554.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665370.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671662.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671449.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662754.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000448671.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448671.2	novel transcript
ENST00000663275.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655916.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659823.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665978.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000415509.1	putative novel transcript
ENST00000665714.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451295.1	novel transcript
ENST00000284674.2	G protein coupled receptor 26
ENST00000284674.2	MANE_select
ENST00000241305.4	MANE_select
ENST00000241305.4	novel protein similar to carboxypeptidase X (M14 family) (CPXM) (LOC119587)
ENST00000481775.1	novel transcript
ENST00000446888.1	putative novel transcript
ENST00000435782.1	QC splicing correct
ENST00000671455.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000394192.2	Y-box protein pseudogene
ENST00000455505.1	novel pseudogene
ENST00000435907.6	MANE_select
ENST00000435907.6	genebuild_only_MANE
ENST00000476765.1	novel transcript
ENST00000462406.1	alternative 5' UTR
ENST00000368845.6	MANE_select
ENST00000368845.6	ornithine aminotransferase (gyrate atrophy)
ENST00000471127.1	ornithine aminotransferase (gyrate atrophy)
ENST00000471127.1	this variant and one or more of variant fragments .1.3, .1.5 and .1.7 could be part of a single variant
ENST00000467675.5	ornithine aminotransferase (gyrate atrophy)
ENST00000483711.1	ornithine aminotransferase (gyrate atrophy)
ENST00000483711.1	this variant and one or more of variant fragments .1.2, .1.5 and .1.7 could be part of a single variant
ENST00000476917.5	novel transcript
ENST00000476917.5	this variant and one or more of variant fragments .1.2 and .1.3 could be part of a single variant.
ENST00000490096.5	ornithine aminotransferase (gyrate atrophy)
ENST00000492376.1	ornithine aminotransferase (gyrate atrophy)
ENST00000492376.1	this variant and one or more of variant fragments .1.2 and .1.3 could be part of a single variant.
ENST00000451024.5	MANE_select
ENST00000368842.10	MANE_select
ENST00000392757.8	QC splicing correct
ENST00000368839.1	phospholysine phosphohistidine inorganic pyrophosphate phosphatase
ENST00000487190.1	phospholysine phosphohistidine inorganic pyrophosphate phosphatase
ENST00000481452.1	phospholysine phosphohistidine inorganic pyrophosphate phosphatase
ENST00000493240.1	phospholysine phosphohistidine inorganic pyrophosphate phosphatase
ENST00000482963.1	phospholysine phosphohistidine inorganic pyrophosphate phosphatase
ENST00000486535.1	phospholysine phosphohistidine inorganic pyrophosphate phosphatase
ENST00000492187.1	phospholysine phosphohistidine inorganic pyrophosphate phosphatase
ENST00000337318.8	MANE_select
ENST00000392754.7	alternative 5' UTR
ENST00000448422.2	putative novel transcript
ENST00000432699.1	putative novel transcript
ENST00000495711.2	QC splicing correct
ENST00000368836.7	MANE_select
ENST00000498770.1	novel transcript
ENST00000468738.1	novel transcript
ENST00000468738.1	this variant and variant fragment .3.7 could be part of a single variant
ENST00000298492.6	MANE_select
ENST00000399021.2	nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1) pseudogene
ENST00000359653.4	MANE_select
ENST00000359653.4	zinc finger, RAN-binding domain containing 1
ENST00000471421.1	zinc finger, RAN-binding domain containing 1
ENST00000449984.1	QC splicing correct
ENST00000309035.11	MANE_select
ENST00000531469.5	alternative 5' UTR
ENST00000494626.6	alternative 5' UTR
ENST00000411419.6	alternative 5' UTR
ENST00000460976.5	C-terminal binding protein 2
ENST00000493552.1	C-terminal binding protein 2
ENST00000476817.1	C-terminal binding protein 2
ENST00000530884.1	alternative 5' UTR
ENST00000530930.1	QC splicing correct
ENST00000617058.1	CAGE supported TSS
ENST00000415184.1	mitochondrial ribosomal protein S21 (MRPS21) pseudogene
ENST00000431701.1	ribosomal protein S27 (metallopanstimulin 1) (MPS1, MPS-1) (RPS27) pseudogene
ENST00000446081.5	novel transcript
ENST00000431861.1	novel transcript
ENST00000526819.5	QC splicing correct
ENST00000368821.4	MANE_select
ENST00000368821.4	novel protein
ENST00000398050.3	aldolase A, fructose-bisphosphate pseudogene 2
ENST00000449693.5	novel transcript
ENST00000419400.1	novel transcript
ENST00000423178.6	novel transcript
ENST00000423178.6	translation given in Em:AK094354.1 looks ambiguous so not used
ENST00000430970.1	QC splicing correct
ENST00000481600.5	erythroid differentiation-related factor 1 (EDRF1)
ENST00000337623.7	erythroid differentiation-related factor 1 (DKFZp586F1019) (EDRF1)
ENST00000356792.9	MANE_select
ENST00000356792.9	nag/nag splice junction compared to -008
ENST00000368813.1	erythroid differentiation-related factor 1 (FLJ21617) (EDRF1)
ENST00000469725.1	novel transcript
ENST00000368812.1	erythroid differentiation-related factor 1 (EDRF1)
ENST00000449436.5	QC splicing correct
ENST00000368808.3	MANE_select
ENST00000470483.1	uroporphyrinogen III synthase (congenital erythropoietic porphyria)
ENST00000484541.5	uroporphyrinogen III synthase (congenital erythropoietic porphyria)
ENST00000368786.5	alternative 5' UTR
ENST00000368786.5	alternatively spliced 5' UTR, shares CDS with bA124H7.2.1
ENST00000368786.5	uroporphyrinogen III synthase (congenital erythropoietic porphyria)
ENST00000650587.1	uroporphyrinogen III synthase (congenital erythropoietic porphyria)
ENST00000368797.10	CAGE supported TSS
ENST00000368797.10	LR annotation
ENST00000368797.10	MANE_select
ENST00000464267.1	uroporphyrinogen III synthase (congenital erythropoietic porphyria)
ENST00000420761.5	uroporphyrinogen III synthase (congenital erythropoietic porphyria)
ENST00000368778.7	uroporphyrinogen III synthase (congenital erythropoietic porphyria)
ENST00000368774.1	uroporphyrinogen III synthase (congenital erythropoietic porphyria)
ENST00000278100.11	BRCA2 and CDKN1A interacting protein (TOK-1)
ENST00000278100.11	MANE_select
ENST00000299130.7	BRCA2 and CDKN1A interacting protein (TOK-1)
ENST00000368759.5	BRCA2 and CDKN1A interacting protein (TOK-1)
ENST00000463330.5	BRCA2 and CDKN1A interacting protein (TOK-1)
ENST00000478798.1	BRCA2 and CDKN1A interacting protein (TOK-1)
ENST00000368721.5	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 (FLJ21216)
ENST00000284690.4	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 (FLJ10694, FLJ10889)
ENST00000284690.4	MANE_select
ENST00000415732.1	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 (FLJ10694, FLJ10889)
ENST00000415732.1	alternative 5' UTR
ENST00000415732.1	alternatively spliced 5' UTR, shares CDS with bA124H7.4.1 (partial)
ENST00000368693.6	MANE_select
ENST00000417114.5	alternative 5' UTR
ENST00000417114.5	alternatively spliced 5' UTR, shares CDS with Em:AC063963.1.1 (partial)
ENST00000417114.5	novel protein (LOC92565)
ENST00000494896.1	novel transcript
ENST00000445510.5	alternative 5' UTR
ENST00000445510.5	alternatively spliced 5' UTR, shares CDS with Em:AC063963.1.4 (partial)
ENST00000445510.5	novel protein (LOC92565)
ENST00000368691.5	novel protein (LOC92565)
ENST00000368689.1	novel protein (LOC92565)
ENST00000492670.5	novel transcript
ENST00000456942.1	novel protein (LOC92565)
ENST00000464130.5	novel transcript
ENST00000477963.1	novel transcript
ENST00000452289.1	guanine nucleotide binding protein (G protein), gamma 10 (GNG10) pseudogene
ENST00000445458.1	putative novel transcript
ENST00000368679.8	a disintegrin and metalloproteinase domain 12 (meltrin alpha) (MCMP, MLTN, MLTNA, MCMPMltna)
ENST00000368676.8	a disintegrin and metalloproteinase domain 12 (meltrin alpha) (MCMP, MLTN, MLTNA, MCMPMltna)
ENST00000467145.1	a disintegrin and metalloproteinase domain 12 (meltrin alpha) (MCMP, MLTN, MLTNA, MCMPMltna)
ENST00000482291.1	a disintegrin and metalloproteinase domain 12 (meltrin alpha) (MCMP, MLTN, MLTNA, MCMPMltna)
ENST00000485388.2	QC splicing correct
ENST00000448723.1	a disintegrin and metalloproteinase domain 12 (meltrin alpha) (MCMP, MLTN, MLTNA, MCMPMltna)
ENST00000494661.1	a disintegrin and metalloproteinase domain 12 (meltrin alpha) (MCMP, MLTN, MLTNA, MCMPMltna)
ENST00000667935.1	Assembled from RACEseq reads
ENST00000456514.1	CAGE supported TSS
ENST00000456514.1	novel transcript
ENST00000424927.5	novel protein
ENST00000480379.5	QC splicing correct
ENST00000368674.5	NMD likely if extended
ENST00000280333.9	gap between first two exons but only intron lies within it
ENST00000623213.2	MANE_select
ENST00000623213.2	NP_001277152.1
ENST00000473861.1	dedicator of cyto-kinesis 1
ENST00000484400.5	dedicator of cyto-kinesis 1
ENST00000495574.1	dedicator of cyto-kinesis 1
ENST00000464466.1	dedicator of cyto-kinesis 1
ENST00000629917.1	NAGNAG splice site
ENST00000432554.6	QC splicing correct
ENST00000420941.2	QC splicing correct
ENST00000522781.6	MANE_select
ENST00000522781.6	QC splicing correct
ENST00000398023.3	MANE_select
ENST00000388920.5	MANE_select
ENST00000388920.5	NP_997309.2
ENST00000603541.1	weak homology
ENST00000368671.4	MANE_select
ENST00000368671.4	novel protein (MGC32871)
ENST00000254667.8	MANE_select
ENST00000254667.8	QC splicing correct
ENST00000254667.8	alternative 5' UTR
ENST00000442830.5	QC splicing correct
ENST00000442830.5	alternative 5' UTR
ENST00000471218.5	alternative 5' UTR
ENST00000455661.5	alternative 5' UTR
ENST00000455661.5	alternatively spliced in 5' UTR, shares partial CDS with bA380J17.1.1
ENST00000455661.5	protein tyrosine phosphatase, receptor type, E
ENST00000467366.1	protein tyrosine phosphatase, receptor type, E
ENST00000487428.1	protein tyrosine phosphatase, receptor type, E
ENST00000495530.5	protein tyrosine phosphatase, receptor type, E
ENST00000492479.1	protein tyrosine phosphatase, receptor type, E
ENST00000463727.1	protein tyrosine phosphatase, receptor type, E (DKFZp313F1310)
ENST00000420845.1	putative novel transcript
ENST00000433110.1	putative novel transcript
ENST00000670526.1	Assembled from SLRseq reads (SRP049776)
ENST00000368653.7	antigen identified by monoclonal antibody Ki-67
ENST00000368654.8	MANE_select
ENST00000368654.8	antigen identified by monoclonal antibody Ki-67
ENST00000464771.1	antigen identified by monoclonal antibody Ki-67
ENST00000484853.1	antigen identified by monoclonal antibody Ki-67
ENST00000478293.1	QC splicing correct
ENST00000454492.1	putative novel transcript
ENST00000667048.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661127.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656262.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667516.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446589.1	novel transcript
ENST00000453367.1	putative novel transcript
ENST00000665632.1	Assembled from SLRseq reads (SRP049776)
ENST00000414581.1	putative novel transcript
ENST00000647791.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000482653.1	O-6-methylguanine-DNA methyltransferase
ENST00000651593.1	MANE_select
ENST00000651593.1	upstream ATG
ENST00000482547.1	O-6-methylguanine-DNA methyltransferase
ENST00000662900.1	Assembled from SLRseq reads (SRP049776)
ENST00000428178.2	QC splicing correct
ENST00000428273.1	putative novel transcript
ENST00000440978.2	CAGE supported TSS
ENST00000440978.2	MANE_select
ENST00000368648.8	CAGE supported TSS
ENST00000368648.8	early B-cell factor 3
ENST00000653993.1	Assembled from SLRseq reads (SRP049776)
ENST00000637128.2	MANE_select
ENST00000456581.1	novel transcript
ENST00000449940.1	peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene
ENST00000331244.10	MANE_select
ENST00000368644.5	alternative 3' UTR
ENST00000368644.5	novel protein similar thioredoxin-like 2 (TXNL2)
ENST00000481034.1	alternative 3' UTR
ENST00000481034.1	novel protein similar thioredoxin-like 2 (TXNL2)
ENST00000486974.1	novel protein similar thioredoxin-like 2 (TXNL2)
ENST00000496195.1	novel protein similar thioredoxin-like 2 (TXNL2)
ENST00000648275.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000657871.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649726.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000368642.4	MANE_select
ENST00000436942.1	putative novel transcript
ENST00000667493.1	Assembled from SLRseq reads (SRP049776)
ENST00000655798.1	Assembled from SLRseq reads (SRP049776)
ENST00000666576.1	Assembled from SLRseq reads (SRP049776)
ENST00000668452.1	NMD exception
ENST00000668452.1	alternative 3' UTR
ENST00000668452.1	alternative 5' UTR
ENST00000657785.1	NMD exception
ENST00000657785.1	NP_001310016.1
ENST00000669493.1	NMD exception
ENST00000670120.1	NMD exception
ENST00000670120.1	NP_001310018.1
ENST00000653512.1	NMD exception
ENST00000659050.1	NMD exception
ENST00000653623.1	NMD exception
ENST00000653623.1	alternative 3' UTR
ENST00000653623.1	alternative 5' UTR
ENST00000664697.1	NMD exception
ENST00000664697.1	alternative 3' UTR
ENST00000660144.1	NMD exception
ENST00000670443.1	NMD exception
ENST00000661339.1	NMD exception
ENST00000658847.1	NMD exception
ENST00000658847.1	alternative 3' UTR
ENST00000666974.1	NMD exception
ENST00000666974.1	alternative 3' UTR
ENST00000666974.1	alternative 5' UTR
ENST00000657318.1	NMD exception
ENST00000666210.1	NMD exception
ENST00000666210.1	NP_001310015.1
ENST00000298622.9	NMD exception
ENST00000298622.9	QC splicing correct
ENST00000298622.9	confirm experimentally
ENST00000657994.1	NMD exception
ENST00000657994.1	alternative 3' UTR
ENST00000669891.1	NMD exception
ENST00000665805.1	NMD exception
ENST00000665805.1	alternative 3' UTR
ENST00000414106.1	putative novel transcript
ENST00000443922.1	putative novel transcript
ENST00000338492.9	MANE_select
ENST00000338492.9	dihydropyrimidinase-like 4 (CRMP3, DRP-4, ULIP4)
ENST00000493927.5	dihydropyrimidinase-like 4 (CRMP3, DRP-4, ULIP4)
ENST00000493882.1	dihydropyrimidinase-like 4 (CRMP3, DRP-4, ULIP4)
ENST00000368627.1	dihydropyrimidinase-like 4 (CRMP3, DRP-4, ULIP4)
ENST00000471544.1	dihydropyrimidinase-like 4 (CRMP3, DRP-4, ULIP4)
ENST00000368622.5	protein kinase (PKE)
ENST00000298630.8	MANE_select
ENST00000298630.8	novel protein
ENST00000368620.2	novel protein
ENST00000368619.3	novel protein
ENST00000456004.1	novel protein
ENST00000344079.9	QC splicing correct
ENST00000625755.2	NP_001137230.1
ENST00000368614.8	MANE_select
ENST00000368614.8	novel protein (KIAA1674)
ENST00000462656.5	novel protein
ENST00000368613.8	novel protein
ENST00000368612.3	novel transcript
ENST00000450442.3	novel protein
ENST00000490055.5	novel transcript
ENST00000489204.1	novel transcript
ENST00000472387.5	novel transcript
ENST00000472556.5	novel transcript
ENST00000476889.1	novel transcript
ENST00000487000.1	novel transcript
ENST00000305233.6	MANE_select
ENST00000305233.6	NP_612508.3
ENST00000428814.1	putative novel transcript
ENST00000450206.1	putative novel transcript
ENST00000490765.4	QC splicing correct
ENST00000671286.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671286.1	putative novel transcript
ENST00000660050.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660050.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000656988.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654872.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000455414.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445190.1	putative novel transcript
ENST00000368594.8	MANE_select
ENST00000368594.8	inositol polyphosphate-5-phosphatase, 40kDa
ENST00000368593.7	inositol polyphosphate-5-phosphatase, 40kDa
ENST00000423490.5	i
ENST00000342652.6	inositol polyphosphate-5-phosphatase, 40kDa
ENST00000487614.1	inositol polyphosphate-5-phosphatase, 40kDa
ENST00000498337.1	inositol polyphosphate-5-phosphatase, 40kDa
ENST00000445580.1	inositol polyphosphate-5-phosphatase, 40kDa
ENST00000368592.8	MANE_select
ENST00000368586.10	MANE_select
ENST00000368585.3	FLJ25954
ENST00000475340.1	novel protein
ENST00000443633.1	alternative 5' exon.  It is impossible to tell whether exon 1 of this variant or variant .4.1 is the true 5' exon of this gene as the genomic sequences are identical in this region
ENST00000443633.1	putative novel transcript (FLJ38184)
ENST00000423232.1	putative novel transcript
ENST00000655722.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664098.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000392606.2	QC splicing correct
ENST00000444433.2	QC splicing correct
ENST00000658362.1	Assembled from SLRseq reads (SRP049776)
ENST00000654383.1	Assembled from SLRseq reads (SRP049776)
ENST00000656946.1	Assembled from SLRseq reads (SRP049776)
ENST00000418634.1	60S ribosomal protein L5 (RPL5) pseudogene
ENST00000304613.8	MANE_select
ENST00000478074.5	novel transcript
ENST00000485110.5	novel transcript
ENST00000304477.3	MANE_select
ENST00000304477.3	undifferentiated embryonic cell transcription factor 1
ENST00000325980.10	MANE_select
ENST00000669738.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000300167.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000445355.8	MANE_select
ENST00000468964.1	QC splicing correct
ENST00000486609.1	QC splicing correct
ENST00000559180.1	NMD likely if extended
ENST00000252936.8	CAGE supported TSS
ENST00000252936.8	MANE_select
ENST00000477923.1	tubulin gamma complex associated protein 2
ENST00000368562.5	tubulin gamma complex associated protein 2
ENST00000482278.5	tubulin gamma complex associated protein 2
ENST00000470829.1	tubulin gamma complex associated protein 2
ENST00000480198.1	tubulin gamma complex associated protein 2
ENST00000361518.10	MANE_select
ENST00000359035.4	novel protein (FLJ34392)
ENST00000252939.9	MANE_select
ENST00000467611.1	novel transcript
ENST00000368558.1	calcyon D1 dopamine receptor-interacting protein (CALCYON)
ENST00000433452.6	MANE_select
ENST00000278025.9	MANE_select
ENST00000278025.9	NP_001091953.1
ENST00000465384.5	novel transcript
ENST00000368551.1	novel protein
ENST00000478895.1	novel transcript
ENST00000368547.4	MANE_select
ENST00000278060.10	MANE_select
ENST00000670407.1	non canonical U12
ENST00000468317.3	non canonical U12
ENST00000664059.1	non canonical U12
ENST00000477902.6	non canonical U12
ENST00000317502.11	MANE_select
ENST00000317502.11	non canonical U12
ENST00000460848.5	FLJ90495
ENST00000460848.5	non canonical U12
ENST00000495014.5	non canonical U12
ENST00000498790.5	non canonical U12
ENST00000473735.1	non canonical U12
ENST00000414069.2	QC splicing correct
ENST00000463137.5	FLJ45320
ENST00000475114.1	putative novel transcript
ENST00000463117.6	cytochrome P450, family 2, subfamily E, polypeptide 1
ENST00000541261.1	alternative 5' UTR
ENST00000252945.8	MANE_select
ENST00000252945.8	genebuild_only_MANE
ENST00000477500.5	cytochrome P450, family 2, subfamily E, polypeptide 1
ENST00000477500.5	this variant and variant fragment .6.5 could be part of a single variant
ENST00000480558.1	cytochrome P450, family 2, subfamily E, polypeptide 1
ENST00000480558.1	this variant and variant fragment .6.5 could be part of a single variant
ENST00000368520.1	cytochrome P450, family 2, subfamily E, polypeptide 1
ENST00000368520.1	this variant and variant fragment .6.5 could be part of a single variant
ENST00000469258.1	cytochrome P450, family 2, subfamily E, polypeptide 1
ENST00000469258.1	this variant and one of variant fragments .6.2, .6.3 and .6.4 could be part of a single variant
ENST00000622716.1	CAGE supported TSS
ENST00000670832.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000479535.2	novel transcript
ENST00000368517.7	QC splicing correct
ENST00000343131.7	MANE_select
ENST00000656338.1	Assembled from SLRseq reads (SRP049776)
ENST00000655152.1	Assembled from SLRseq reads (SRP049776)
ENST00000657107.1	Assembled from SLRseq reads (SRP049776)
ENST00000669404.1	Assembled from SLRseq reads (SRP049776)
ENST00000665054.1	Assembled from SLRseq reads (SRP049776)
ENST00000669879.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000443774.5	QC splicing correct
ENST00000443774.5	not best-in-genome evidence
ENST00000425520.2	MANE_select
ENST00000394842.2	retinoic acid receptor responder (tazarotenenduced) 2 (TIG2, HP10433) (RARRES2) pseudogene
ENST00000411632.1	novel pseudogene
ENST00000450011.1	ribosomal protein L23a (RPL23A) pseudogene
ENST00000527297.1	QC splicing correct
ENST00000623180.1	not best-in-genome evidence
ENST00000624936.2	not best-in-genome evidence
ENST00000595228.4	LOC653486
ENST00000595228.4	MANE_select
ENST00000342878.3	MANE_select
ENST00000325113.9	MANE_select
ENST00000532373.1	not organism-supported
ENST00000382743.9	MANE_select
ENST00000528469.1	alternative 5' UTR
ENST00000525776.1	alternative 5' UTR
ENST00000525237.1	alternative 5' UTR
ENST00000532097.6	MANE_select
ENST00000534750.6	MANE_select
ENST00000409548.7	MANE_select
ENST00000382614.2	MANE_select
ENST00000681810.1	Snaptron_GTEX
ENST00000681810.1	alternative 5' UTR
ENST00000681810.1	intropolis
ENST00000681914.1	Snaptron_GTEX
ENST00000681914.1	alternative 5' UTR
ENST00000680081.1	Snaptron_GTEX
ENST00000680081.1	alternative 5' UTR
ENST00000680081.1	intropolis
ENST00000679962.1	Snaptron_GTEX
ENST00000679962.1	alternative 5' UTR
ENST00000679962.1	intropolis
ENST00000680869.1	Snaptron_GTEX
ENST00000680869.1	intropolis
ENST00000681900.1	Snaptron_GTEX
ENST00000681900.1	alternative 5' UTR
ENST00000681900.1	intropolis
ENST00000681276.1	Snaptron_GTEX
ENST00000681276.1	alternative 5' UTR
ENST00000681276.1	intropolis
ENST00000616316.2	CAGE supported TSS
ENST00000616316.2	downstream ATG
ENST00000399817.9	pacbio_capture_seq_hsLiver
ENST00000680197.1	SLR-seq_TB0000034
ENST00000680197.1	Snaptron_GTEX
ENST00000680197.1	alternative 3' UTR
ENST00000680197.1	intropolis
ENST00000680344.1	PASA_cluster_3408_align_id:1293744|asmbl_13647
ENST00000680344.1	Snaptron_GTEX
ENST00000680344.1	pacbio_capture_seq_hsHeLa
ENST00000680344.1	pacbio_capture_seq_hsTestes
ENST00000680619.1	Snaptron_GTEX
ENST00000680619.1	intropolis
ENST00000681833.1	Snaptron_GTEX
ENST00000681833.1	intropolis
ENST00000680011.1	Snaptron_GTEX
ENST00000680011.1	intropolis
ENST00000680261.1	Snaptron_GTEX
ENST00000602569.2	Snaptron_GTEX
ENST00000602569.2	alternative 5' UTR
ENST00000602569.2	intropolis
ENST00000680099.1	Snaptron_GTEX
ENST00000680099.1	alternative 5' UTR
ENST00000679636.1	Snaptron_GTEX
ENST00000679636.1	intropolis
ENST00000679383.1	Snaptron_GTEX
ENST00000679383.1	intropolis
ENST00000680585.1	Snaptron_GTEX
ENST00000680585.1	intropolis
ENST00000681211.1	Snaptron_GTEX
ENST00000681211.1	alternative 3' UTR
ENST00000681211.1	intropolis
ENST00000680299.1	CAGE supported TSS
ENST00000680299.1	Snaptron_GTEX_1493
ENST00000680299.1	alternative 5' UTR
ENST00000680299.1	intropolis_674
ENST00000679353.1	Snaptron_GTEX
ENST00000679353.1	alternative 5' UTR
ENST00000679353.1	intropolis_filtered
ENST00000679982.1	Snaptron_GTEX
ENST00000679982.1	alternative 5' UTR
ENST00000679982.1	intropolis_filtered
ENST00000681350.1	Snaptron_GTEX
ENST00000681350.1	alternative 5' UTR
ENST00000681350.1	intropolis_filtered
ENST00000680855.1	Snaptron_GTEX
ENST00000680855.1	alternative 5' UTR
ENST00000680855.1	intropolis_filtered
ENST00000680588.1	CAGE supported TSS
ENST00000680588.1	Snaptron_GTEX_6038
ENST00000680588.1	alternative 5' UTR
ENST00000680588.1	intropolis_1952
ENST00000680588.1	pacbio_capture_seq_hsBrain
ENST00000680310.1	Snaptron_GTEX
ENST00000680310.1	alternative 5' UTR
ENST00000680310.1	intropolis_filtered
ENST00000681702.1	Snaptron_GTEX
ENST00000681702.1	alternative 5' UTR
ENST00000681702.1	intropolis_filtered
ENST00000681111.1	Snaptron_GTEX
ENST00000681111.1	alternative 5' UTR
ENST00000681111.1	intropolis_filtered
ENST00000680342.1	Snaptron_GTEX
ENST00000680342.1	alternative 5' UTR
ENST00000680342.1	intropolis_filtered
ENST00000680870.1	Snaptron_GTEX
ENST00000680870.1	alternative 5' UTR
ENST00000680870.1	intropolis_filtered
ENST00000681293.1	Snaptron_GTEX
ENST00000681293.1	intropolis_filtered
ENST00000680802.1	Snaptron_GTEX
ENST00000680802.1	alternative 5' UTR
ENST00000528780.5	alternative 5' UTR
ENST00000681761.1	Snaptron_GTEX
ENST00000681761.1	alternative 5' UTR
ENST00000681761.1	intropolis_filtered
ENST00000681821.1	Snaptron_GTEX
ENST00000681821.1	intropolis_filtered
ENST00000328221.5	alternative 5' UTR
ENST00000680699.1	Snaptron_GTEX
ENST00000680699.1	intropolis_filtered
ENST00000681938.1	Snaptron_GTEX
ENST00000681938.1	intropolis_filtered
ENST00000681938.1	pacbio_capture_seq_hsBrain
ENST00000679380.1	Snaptron_GTEX
ENST00000679380.1	intropolis filtered
ENST00000680938.1	Snaptron_GTEX
ENST00000680938.1	intropolis_filtered
ENST00000408968.4	MANE_select
ENST00000679765.1	Snaptron_GTEX
ENST00000679765.1	intropolis_filtered
ENST00000681180.1	Snaptron_GTEX
ENST00000681180.1	intropolis filtered
ENST00000681426.1	intropolis_filtered
ENST00000681577.1	intropolis_filtered
ENST00000680696.1	Ensembl_RNAseq
ENST00000680696.1	intropolis_filtered
ENST00000680611.1	intropolis filtered
ENST00000679793.1	Snaptron_GTEX
ENST00000679793.1	intropolis_filtered
ENST00000680920.1	Snaptron_GTEX
ENST00000680920.1	intropolis_filtered
ENST00000680932.1	pacbio_capture_seq_hsUndeter_m150424_203641_42137_c100813372550000001823175210081565_s1_p0_136311_ccs
ENST00000681198.1	Snaptron_GTEX
ENST00000681198.1	intropolis_filtered
ENST00000399808.5	MANE_select
ENST00000680209.1	Snaptron_GTEX
ENST00000680209.1	intropolis_filtered
ENST00000681304.1	Snaptron_GTEX
ENST00000681304.1	intropolis_filtered
ENST00000681840.1	Snaptron_GTEX
ENST00000681840.1	intropolis_filtered
ENST00000531688.2	pacbio_capture_seq_hsK562_m150426_180445_42137_c100813572550000001823175210081507_s1_p0_104027_ccs
ENST00000680023.1	Snaptron_GTEX
ENST00000680023.1	alternative 5' UTR
ENST00000680023.1	intropolis_filered
ENST00000679433.1	Snaptron_GTEX
ENST00000679433.1	alternative 5' UTR
ENST00000679433.1	intropolis_filtered
ENST00000679441.1	Snaptron_GTEX
ENST00000679441.1	alternative 5' UTR
ENST00000679792.1	Snaptron_GTEX
ENST00000679792.1	intropolis_filered
ENST00000681184.1	Snaptron_GTEX
ENST00000681184.1	alternative 5' UTR
ENST00000681184.1	intropolis_filered
ENST00000680720.1	Snaptron_GTEX
ENST00000680720.1	alternative 5' UTR
ENST00000680720.1	intropolis_filered
ENST00000680622.1	Snaptron_GTEX
ENST00000680622.1	alternative 5' UTR
ENST00000680622.1	intropolis_filered
ENST00000681748.1	Snaptron_GTEX
ENST00000681748.1	intropolis_filtered
ENST00000679746.1	Snaptron_GTEX
ENST00000679746.1	intropolis_filtered
ENST00000681048.1	Snaptron_GTEX
ENST00000681048.1	intropolis_filtered
ENST00000679830.1	Snaptron_GTEX
ENST00000679830.1	intropolis_filtered
ENST00000680716.1	Snaptron_GTEX
ENST00000680716.1	intropolis_filtered
ENST00000680372.1	Snaptron_GTEX
ENST00000680372.1	intropolis_filtered
ENST00000329962.11	MANE_select
ENST00000533249.5	alternative 5' UTR
ENST00000527442.5	alternative 5' UTR
ENST00000528036.5	alternative 5' UTR
ENST00000331563.7	MANE_select
ENST00000530695.1	not organism-supported
ENST00000431843.7	MANE_select
ENST00000431843.7	alternative 5' UTR
ENST00000397632.7	alternative 5' UTR
ENST00000332826.7	MANE_select
ENST00000308020.6	MANE_select
ENST00000534797.5	alternative 5' UTR
ENST00000397615.6	alternative 5' UTR
ENST00000354420.7	MANE_select
ENST00000354420.7	alternative 5' UTR
ENST00000397604.7	alternative 5' UTR
ENST00000533410.5	alternative 5' UTR
ENST00000438658.6	alternative 5' UTR
ENST00000527485.5	alternative 5' UTR
ENST00000529368.5	alternative 5' UTR
ENST00000529306.5	alternative 5' UTR
ENST00000532055.5	alternative 5' UTR
ENST00000533592.2	confirm experimentally
ENST00000531540.5	alternative 5' UTR
ENST00000526295.1	alternative 5' UTR
ENST00000670787.1	Assembled from SLRseq reads (SRP049776)
ENST00000397596.6	alternative 5' UTR
ENST00000493230.5	PMID: 9563009 and PMID: 14500341 support that this is not subject to NMD
ENST00000311189.8	MANE_select
ENST00000270115.8	MANE_select
ENST00000329451.8	MANE_select
ENST00000659402.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000431809.5	alternative 5' UTR
ENST00000397583.8	MANE_select
ENST00000454668.2	NP_001137466
ENST00000528736.1	alternative 5' UTR
ENST00000665964.1	Assembled from SLRseq reads (SRP049776)
ENST00000416188.3	NAGNAG splice site
ENST00000416188.3	NP_065952.2
ENST00000264555.10	MANE_select
ENST00000413872.6	NAGNAG splice site
ENST00000525445.6	CAGE supported TSS
ENST00000525445.6	LR annotation
ENST00000525445.6	MANE_select
ENST00000649187.1	NAGNAG splice site
ENST00000647801.1	alternative 5' UTR
ENST00000397542.7	CAGE supported TSS
ENST00000397542.7	LR annotation
ENST00000397542.7	MANE_select
ENST00000674088.1	alternative 5' UTR
ENST00000176195.4	MANE_select
ENST00000176183.6	MANE_select
ENST00000382409.4	MANE_select
ENST00000524763.5	alternative 5' UTR
ENST00000527199.5	alternative 5' UTR
ENST00000533256.5	alternative 5' UTR
ENST00000534755.5	alternative 5' UTR
ENST00000650127.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000318562.13	MANE_select
ENST00000533500.5	alternative 5' UTR
ENST00000531348.5	alternative 5' UTR
ENST00000530636.5	alternative 5' UTR
ENST00000397510.8	upstream ATG
ENST00000608174.6	upstream ATG
ENST00000319006.8	MANE_select
ENST00000319863.13	MANE_select
ENST00000655766.1	Assembled from SLRseq reads (SRP049776)
ENST00000330106.5	MANE_select
ENST00000320230.9	CAGE supported TSS
ENST00000628067.3	MANE_select
ENST00000628067.3	alternative 5' UTR
ENST00000531214.5	alternative 5' UTR
ENST00000627843.2	alternative 5' UTR
ENST00000625419.2	alternative 5' UTR
ENST00000532484.5	alternative 5' UTR
ENST00000528606.5	alternative 5' UTR
ENST00000529351.5	alternative 5' UTR
ENST00000533385.5	alternative 5' UTR
ENST00000531534.5	alternative 5' UTR
ENST00000527723.5	alternative 5' UTR
ENST00000526152.5	alternative 5' UTR
ENST00000527734.5	alternative 5' UTR
ENST00000625752.2	alternative 5' UTR
ENST00000456706.6	alternative 5' UTR
ENST00000528936.5	alternative 5' UTR
ENST00000629634.2	alternative 5' UTR
ENST00000625316.2	NMD likely if extended
ENST00000529066.5	alternative 5' UTR
ENST00000629602.1	NMD likely if extended
ENST00000530360.2	alternative 5' UTR
ENST00000347755.10	MANE_select
ENST00000321153.9	MANE_select
ENST00000530797.5	alternative 5' UTR
ENST00000336615.9	MANE_select
ENST00000528315.1	alternative 5' UTR
ENST00000533803.1	alternative 5' UTR
ENST00000527089.5	alternative 5' UTR
ENST00000530183.1	alternative 5' UTR
ENST00000528542.6	non canonical polymorphism
ENST00000525077.2	MANE_select
ENST00000524748.6	alternative 5' UTR
ENST00000397420.9	CAGE supported TSS
ENST00000397420.9	LR annotation
ENST00000397420.9	MANE_select
ENST00000397420.9	alternative 5' UTR
ENST00000525718.6	alternative 5' UTR
ENST00000526693.5	alternative 5' UTR
ENST00000527341.5	alternative 5' UTR
ENST00000528867.5	alternative 5' UTR
ENST00000530320.5	alternative 5' UTR
ENST00000526439.1	alternative 5' UTR
ENST00000322028.5	MANE_select
ENST00000397411.6	alternative 5' UTR
ENST00000397397.7	MANE_select
ENST00000530404.5	alternative 5' UTR
ENST00000525334.5	alternative 5' UTR
ENST00000409543.6	alternative 5' UTR
ENST00000525201.5	NP_001020410.1
ENST00000527644.1	alternative 5' UTR
ENST00000323578.13	MANE_select
ENST00000529539.5	alternative 3' UTR
ENST00000436108.6	alternative 5' UTR
ENST00000533056.5	alternative 5' UTR
ENST00000533059.5	alternative 5' UTR
ENST00000530939.5	alternative 5' UTR
ENST00000525225.1	alternative 5' UTR
ENST00000525840.1	alternative 5' UTR
ENST00000528154.1	alternative 5' UTR
ENST00000448903.7	MANE_select
ENST00000421673.7	MANE_select
ENST00000361558.7	sequence error
ENST00000534821.1	gene fragments AADD01112371.1-001 and AADC01095577.1-001 are part of the same gene; an assembly gap between them contains one or more exons
ENST00000529681.5	MANE_select
ENST00000317204.11	MANE_select
ENST00000662307.1	Assembled from SLRseq reads (SRP049776)
ENST00000650218.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000528841.6	MANE_select
ENST00000528596.5	alternative 5' UTR
ENST00000524702.5	alternative 5' UTR
ENST00000650363.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000329957.7	CCDS53591.1
ENST00000329957.7	MANE_select
ENST00000526462.5	The alignment for the first 62bp of this transcript are likely to be found when the error has been corrected
ENST00000526462.5	There is a suspected genomic sequencing error affecting the 5' of this locus (HG-152)
ENST00000529380.1	There is a suspected genomic sequence error (HG-152) at the 5' of this locus. Presumably the alignment for the first 88bp of this transcript will be found once the error has been corrected
ENST00000397374.8	MANE_select
ENST00000659213.1	Assembled from SLRseq reads (SRP049776)
ENST00000382171.2	MANE_select
ENST00000412090.2	MANE_select
ENST00000399685.1	MANE_select
ENST00000399682.1	179 bp of alignment is missing within the central repetitive domain. This may be due to sequencing error in either the clone or the cDNA, or it may reflect polymorphism. ORF stays in frame
ENST00000399682.1	MANE_select
ENST00000399676.3	Gaps of 31 and 32 bp are present within the alignment of the central repetitive domain. This may be due to sequencing error in the clone or cDNA, or it may reflect polymorphism. ORF stays in frame
ENST00000660644.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000382160.1	MANE_select
ENST00000340134.5	LOC402778
ENST00000340134.5	MANE_select
ENST00000482459.1	novel transcript
ENST00000637815.2	EST evidence: BU195845.1 and BM976200.1
ENST00000367196.4	CAGE supported TSS
ENST00000236671.7	MANE_select
ENST00000429746.2	alternative 5' UTR
ENST00000433655.6	Genoscope mRNA only
ENST00000658619.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000479276.5	FLJ16250
ENST00000490707.5	DKFZp434K0322
ENST00000424556.2	not organism-supported
ENST00000482118.1	Novel transcript
ENST00000381911.6	MANE_select
ENST00000381911.6	alternative 5' UTR
ENST00000676039.1	CAGE supported TSS
ENST00000311604.8	CAGE supported TSS
ENST00000311604.8	MANE_select
ENST00000381775.5	FLJ34752
ENST00000406638.6	FLJ32014
ENST00000485341.5	FLJ36340
ENST00000640310.2	CAGE supported TSS
ENST00000640310.2	confirm experimentally
ENST00000455671.2	CAGE supported TSS
ENST00000660469.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000278317.11	MANE_select
ENST00000381557.6	the CDS of this variant is predicted to break a Pfam domain by Michael Tress (CNB Madrid) - analysis done as part of the ENCODE/Biosapiens project
ENST00000381589.7	DKFZp779M2348
ENST00000381558.6	FLJ32406
ENST00000381519.5	alternative 3' UTR
ENST00000397298.8	MANE_select
ENST00000431095.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000381395.5	alternative 5' UTR
ENST00000381406.8	non canonical conserved
ENST00000416167.7	MANE_select
ENST00000434045.6	NP_001121070.1
ENST00000381392.5	alternative 5' UTR
ENST00000381392.5	non canonical conserved
ENST00000381389.5	alternative 5' UTR
ENST00000418738.2	alternative 5' UTR
ENST00000481781.2	CAGE supported TSS
ENST00000397262.5	alternative 5' UTR
ENST00000381330.5	MANE_select
ENST00000250971.7	alternative 5' UTR
ENST00000352909.8	MANE_select
ENST00000331289.5	MANE_select
ENST00000381153.8	MANE_select
ENST00000470369.1	novel transcript
ENST00000461200.5	FLJ46034
ENST00000182290.9	MANE_select
ENST00000602923.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000530648.5	alternative 5' UTR
ENST00000263645.10	MANE_select
ENST00000492627.5	alternative 5' UTR
ENST00000333256.11	MANE_select
ENST00000437110.5	alternative 5' UTR
ENST00000435795.5	alternative 5' UTR
ENST00000485682.6	alternative 5' UTR
ENST00000440813.1	alternative 5' UTR
ENST00000496468.1	alternative 5' UTR
ENST00000155840.12	CARS
ENST00000155840.12	LR annotation
ENST00000155840.12	MANE_select
ENST00000335475.6	LR annotation
ENST00000597346.1	confirm experimentally
ENST00000414822.8	alternative 3' UTR
ENST00000430149.3	LR annotation
ENST00000440480.8	CAGE supported TSS
ENST00000440480.8	MANE_select
ENST00000526203.1	alternative 5' UTR
ENST00000455942.3	QC splicing correct
ENST00000347936.6	LR annotation
ENST00000347936.6	alternative 5' UTR
ENST00000649076.2	LR annotation
ENST00000649076.2	MANE_select
ENST00000380574.5	alternative 5' UTR
ENST00000485423.1	alternative 5' UTR
ENST00000314222.5	LR annotation
ENST00000314222.5	MANE_select
ENST00000380542.9	MANE_select
ENST00000430811.5	alternative 5' UTR
ENST00000529361.5	alternative 5' UTR
ENST00000528968.5	alternative 5' UTR
ENST00000530064.5	alternative 5' UTR
ENST00000526842.5	alternative 5' UTR
ENST00000531291.5	alternative 5' UTR
ENST00000455338.6	alternative 5' UTR
ENST00000534372.1	alternative 5' UTR
ENST00000380525.9	MANE_select
ENST00000648498.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000263650.12	MANE_select
ENST00000534454.5	alternative 3' UTR
ENST00000525498.5	184226
ENST00000348039.9	alternative 5' UTR
ENST00000533234.5	alternative 5' UTR
ENST00000526122.5	alternative 5' UTR
ENST00000530372.5	alternative 5' UTR
ENST00000533721.5	alternative 5' UTR
ENST00000534157.1	alternative 5' UTR
ENST00000332314.3	MANE_select
ENST00000531711.1	alternative 5' UTR
ENST00000420873.2	alternative 5' UTR
ENST00000389832.7	MANE_select
ENST00000399602.9	MANE_select
ENST00000529678.5	alternative 5' UTR
ENST00000534569.5	alternative 5' UTR
ENST00000659225.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656923.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000397068.8	MANE_select
ENST00000359918.8	alternative 5' UTR
ENST00000425767.2	not organism-supported
ENST00000250693.2	MANE_select
ENST00000250699.2	MANE_select
ENST00000324932.12	MANE_select
ENST00000650171.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000300730.10	NP_001138910.1
ENST00000532535.5	NMD likely if extended
ENST00000396993.8	CAGE supported TSS
ENST00000477358.6	CAGE supported TSS
ENST00000532523.5	CAGE supported TSS
ENST00000459679.5	CAGE supported TSS
ENST00000464229.5	CAGE supported TSS
ENST00000464261.5	CAGE supported TSS
ENST00000524661.5	CAGE supported TSS
ENST00000475884.5	CAGE supported TSS
ENST00000464441.5	CAGE supported TSS
ENST00000278243.9	MANE_select
ENST00000351018.5	MANE_select
ENST00000396979.1	alternative 5' UTR
ENST00000396978.1	alternative 5' UTR
ENST00000533217.1	alternative 5' UTR
ENST00000526596.2	CAGE supported TSS
ENST00000526596.2	MANE_select
ENST00000300737.8	corf
ENST00000532610.5	alternative 5' UTR
ENST00000532919.5	alternative 5' UTR
ENST00000524822.5	alternative 5' UTR
ENST00000525055.5	alternative 5' UTR
ENST00000528656.5	alternative 5' UTR
ENST00000532990.1	alternative 5' UTR
ENST00000300738.10	MANE_select
ENST00000641245.1	NCBI GEO ID GSE80249
ENST00000641518.1	ENA ID EGAS00001001486
ENST00000667222.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000624801.3	LOF variant in other haplotypes
ENST00000624801.3	MANE_select
ENST00000254436.8	MANE_select
ENST00000641797.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000325719.4	MANE_select
ENST00000641528.1	MANE_select
ENST00000641528.1	NCBI GEO ID GSE80249
ENST00000642020.1	NCBI GEO ID GSE80249
ENST00000360213.1	MANE_select
ENST00000641896.1	ENA ID EGAS00001001486
ENST00000641896.1	alternative 5' UTR
ENST00000530443.3	ENA ID EGAS00001001486
ENST00000300747.10	MANE_select
ENST00000641817.1	MANE_select
ENST00000641817.1	NCBI GEO ID GSE80249
ENST00000641817.1	alternative 5' UTR
ENST00000530215.2	ENA ID EGAS00001001486
ENST00000530215.2	NCBI GEO ID GSE80249
ENST00000396952.6	MANE_select
ENST00000641638.1	ENA ID EGAS00001001486
ENST00000641638.1	alternative 5' UTR
ENST00000396950.4	MANE_select
ENST00000532598.1	alternative 5' UTR
ENST00000641159.1	ENA ID EGAS00001001486
ENST00000641454.1	ENA ID EGAS00001001486
ENST00000624103.1	LOF variant in other haplotypes
ENST00000624978.1	LOF variant in other haplotypes
ENST00000624978.1	MANE_select
ENST00000322110.8	MANE_select
ENST00000641606.1	ENA ID EGAS00001001486
ENST00000641606.1	NCBI GEO ID GSE80249
ENST00000322101.4	ENA ID EGAS00001001486
ENST00000646738.1	The 302 aa intact CDS  retains 7 TM regions but OR has lost large part of C-terminal and difficult to determine whether it would still be   functional without experimental validation
ENST00000322059.3	ENA ID EGAS00001001486
ENST00000641424.1	ENA ID EGAS00001001486
ENST00000641490.1	ENA ID EGAS00001001486
ENST00000641490.1	MANE_select
ENST00000641926.1	ENA ID EGAS00001001486
ENST00000623849.1	LOF variant in other haplotypes
ENST00000623849.1	MANE_select
ENST00000641898.1	MANE_select
ENST00000641898.1	NCBI GEO ID GSE80249
ENST00000380371.1	MANE_select
ENST00000641624.1	ENA ID EGAS00001001486
ENST00000641819.1	ENA ID EGAS00001001486
ENST00000641819.1	MANE_select
ENST00000642056.1	ENA ID EGAS00001001486
ENST00000380370.1	MANE_select
ENST00000321522.2	MANE_select
ENST00000642125.1	ENA ID EGAS00001001486
ENST00000642125.1	alternative 5' UTR
ENST00000307388.2	ENA ID EGAS00001001486
ENST00000307388.2	MANE_select
ENST00000380367.3	ENA ID EGAS00001001486
ENST00000380367.3	MANE_select
ENST00000380367.3	NCBI GEO ID GSE80249
ENST00000511110.1	unitary_pseudogene
ENST00000335295.4	CAGE supported TSS
ENST00000335295.4	LR annotation
ENST00000335295.4	MANE_select
ENST00000380315.2	alternative 5' UTR
ENST00000650601.1	LR annotation
ENST00000650601.1	MANE_select
ENST00000643122.1	CAGE supported TSS
ENST00000643122.1	alternative 5' UTR
ENST00000429817.1	alternative 5' UTR
ENST00000429817.1	upstream uORF
ENST00000330597.5	LR annotation
ENST00000330597.5	MANE_select
ENST00000632727.1	NMD exception
ENST00000336906.6	MANE_select
ENST00000380252.6	CAGE supported TSS
ENST00000380252.6	upstream ATG
ENST00000444587.1	NMD exception
ENST00000396895.3	CAGE supported TSS
ENST00000396895.3	LR annotation
ENST00000396895.3	MANE_select
ENST00000380237.5	CAGE supported TSS
ENST00000380237.5	alternative 5' UTR
ENST00000292896.3	alternative 5' UTR
ENST00000292896.3	upstream uORF
ENST00000380224.2	MANE_select
ENST00000624187.1	LOF variant in other haplotypes
ENST00000380219.1	MANE_select
ENST00000641529.1	ENA ID EGAS00001001486
ENST00000641529.1	NCBI GEO ID GSE80249
ENST00000642046.1	ENA ID EGAS00001001486
ENST00000642046.1	MANE_select
ENST00000642046.1	NCBI GEO ID GSE80249
ENST00000300778.4	LOF variant in other haplotypes
ENST00000300778.4	MANE_select
ENST00000510214.1	unitary_pseudogene
ENST00000641930.1	NCBI GEO ID GSE80249
ENST00000307165.4	unitary_pseudogene
ENST00000322641.5	MANE_select
ENST00000311659.5	MANE_select
ENST00000380184.2	MANE_select
ENST00000380184.2	NP_659490.4
ENST00000322653.6	ENA ID EGAS00001001486
ENST00000322653.6	NCBI GEO ID GSE80249
ENST00000514607.1	unitary_pseudogene
ENST00000641118.1	ENA ID EGAS00001001486
ENST00000641694.1	NCBI GEO ID GSE80249
ENST00000641744.1	NCBI GEO ID GSE80249
ENST00000345043.2	MANE_select
ENST00000380097.8	MANE_select
ENST00000380097.8	NP_001003818.1
ENST00000515022.5	alternative 5' UTR
ENST00000514226.5	alternative 5' UTR
ENST00000429814.3	MANE_select
ENST00000380034.8	MANE_select
ENST00000379965.8	MANE_select
ENST00000439752.1	unitary_pseudogene
ENST00000438474.1	unitary_pseudogene
ENST00000317121.6	MANE_select
ENST00000641350.1	ENA ID EGAS00001001486
ENST00000641350.1	LOF variant in other haplotypes
ENST00000641377.1	NCBI GEO ID GSE80249
ENST00000641181.1	MANE_select
ENST00000641181.1	olender
ENST00000641645.1	ENA ID EGAS00001001486
ENST00000641645.1	MANE_select
ENST00000413417.1	unitary_pseudogene
ENST00000329322.5	MANE_select
ENST00000641726.1	MANE_select
ENST00000641726.1	dlogan
ENST00000610445.2	ENA ID EGAS00001001486
ENST00000610445.2	NCBI GEO ID GSE80249
ENST00000641160.1	ENA ID EGAS00001001486
ENST00000641160.1	MANE_select
ENST00000641160.1	NCBI GEO ID GSE80249
ENST00000641160.1	alternative 5' UTR
ENST00000641878.1	NCBI GEO ID GSE80249
ENST00000641905.1	ENA ID EGAS00001001486
ENST00000641905.1	NCBI GEO ID GSE80249
ENST00000532411.2	MANE_select
ENST00000332249.4	MANE_select
ENST00000641156.1	ENA ID EGAS00001001486
ENST00000641156.1	MANE_select
ENST00000641156.1	alternative 5' UTR
ENST00000641835.1	ENA ID EGAS00001001486
ENST00000641835.1	alternative 5' UTR
ENST00000641900.1	ENA ID EGAS00001001486
ENST00000641900.1	alternative 5' UTR
ENST00000641423.1	NCBI GEO ID GSE80249
ENST00000641423.1	alternative 5' UTR
ENST00000446117.1	unitary_pseudogene
ENST00000316529.3	MANE_select
ENST00000316375.3	MANE_select
ENST00000449352.7	MANE_select
ENST00000379936.3	MANE_select
ENST00000334619.7	MANE_select
ENST00000303927.4	MANE_select
ENST00000668307.1	Assembled from SLRseq reads (SRP049776)
ENST00000649129.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000649129.2	Assembled from SLRseq reads (SRP049776)
ENST00000662112.1	Assembled from SLRseq reads (SRP049776)
ENST00000652923.1	Assembled from SLRseq reads (SRP049776)
ENST00000655261.1	Assembled from SLRseq reads (SRP049776)
ENST00000632757.2	Assembled from SLRseq reads (SRP049776)
ENST00000342245.9	MANE_select
ENST00000608655.5	NP_001244248.1
ENST00000608704.5	NP_001244249.1
ENST00000299402.10	alternative 5' UTR
ENST00000609360.6	MANE_select
ENST00000608394.5	NP_001244250.1
ENST00000608394.5	alternative 5' UTR
ENST00000608645.5	NP_001244255.1
ENST00000608645.5	alternative 5' UTR
ENST00000609331.5	NP_001244254.1
ENST00000530885.5	NP_001244252.1
ENST00000529890.5	alternative 5' UTR
ENST00000532020.2	alternative 5' UTR
ENST00000265983.8	MANE_select
ENST00000345851.8	MANE_select
ENST00000525074.5	alternative 5' UTR
ENST00000254584.6	alternative 5' UTR
ENST00000396777.8	MANE_select
ENST00000445086.6	upstream uORF
ENST00000254616.11	MANE_select
ENST00000254579.11	CAGE supported TSS
ENST00000254579.11	MANE_select
ENST00000254579.11	confirm experimentally
ENST00000254605.11	MANE_select
ENST00000420936.6	alternative 5' UTR
ENST00000299421.9	MANE_select
ENST00000396751.6	alternative 5' UTR
ENST00000299424.9	MANE_select
ENST00000299427.12	MANE_select
ENST00000299427.12	upstream ATG
ENST00000642892.1	alternative 5' UTR
ENST00000645620.1	alternative 5' UTR
ENST00000647152.1	alternative 5' UTR
ENST00000647152.1	upstream ATG
ENST00000530040.2	NMD likely if extended
ENST00000534644.6	NMD likely if extended
ENST00000528571.6	alternative 3' UTR
ENST00000299441.5	MANE_select
ENST00000656961.1	Assembled from SLRseq reads (SRP049776)
ENST00000288937.7	MANE_select
ENST00000641124.1	ENA ID EGAS00001001486
ENST00000641124.1	MANE_select
ENST00000641169.1	ENA ID EGAS00001001486
ENST00000641169.1	NAGNAG splice site
ENST00000641169.1	alternative 5' UTR
ENST00000641258.1	ENA ID EGAS00001001486
ENST00000641344.1	ENA ID EGAS00001001486
ENST00000641196.1	ENA ID EGAS00001001486
ENST00000641196.1	MANE_select
ENST00000637205.2	Assembled from SLRseq reads (SRP049776)
ENST00000641461.1	ENA ID EGAS00001001486
ENST00000641461.1	MANE_select
ENST00000379829.2	MANE_select
ENST00000278319.10	MANE_select
ENST00000414517.6	alternative 5' UTR
ENST00000278314.5	MANE_select
ENST00000299481.5	MANE_select
ENST00000306904.7	MANE_select
ENST00000318881.11	MANE_select
ENST00000530201.2	Assembled from SLRseq reads (SRP049776)
ENST00000671315.1	Assembled from SLRseq reads (SRP049776)
ENST00000654089.1	Assembled from SLRseq reads (SRP049776)
ENST00000664943.1	Assembled from SLRseq reads (SRP049776)
ENST00000530135.5	alternative 5' UTR
ENST00000329293.4	MANE_select
ENST00000526873.5	alternative 5' UTR
ENST00000528947.5	alternative 5' UTR
ENST00000299492.9	MANE_select
ENST00000527790.5	alternative 5' UTR
ENST00000526046.1	alternative 5' UTR
ENST00000299498.11	MANE_select
ENST00000299498.11	alternative 5' UTR
ENST00000531096.5	alternative 5' UTR
ENST00000527542.5	alternative 5' UTR
ENST00000436351.2	alternative 5' UTR
ENST00000533663.5	upstream ATG
ENST00000641219.1	ENA ID EGAS00001001486
ENST00000641219.1	NCBI GEO ID GSE80249
ENST00000641167.1	ENA ID EGAS00001001486
ENST00000641238.1	ENA ID EGAS00001001486
ENST00000641238.1	LOF variant in other haplotypes
ENST00000641238.1	alternative 5' UTR
ENST00000642108.1	ENA ID EGAS00001001486
ENST00000642108.1	LOF variant in other haplotypes
ENST00000642047.1	ENA ID EGAS00001001486
ENST00000526590.1	alternative 5' UTR
ENST00000640290.2	alternative 3' UTR
ENST00000651655.1	MANE_select
ENST00000651655.1	alternative 5' UTR
ENST00000651655.1	genebuild_only_MANE
ENST00000534076.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000299506.3	MANE_select
ENST00000309737.11	MANE_select
ENST00000335790.8	MANE_select
ENST00000534484.1	not organism-supported
ENST00000447869.5	alternative 5' UTR
ENST00000396672.5	alternative 5' UTR
ENST00000534493.5	alternative 5' UTR
ENST00000422559.6	alternative 5' UTR
ENST00000457885.6	alternative 5' UTR
ENST00000532336.1	not organism-supported
ENST00000431279.6	alternative 5' UTR
ENST00000454443.2	alternative 5' UTR
ENST00000526360.1	alternative 5' UTR
ENST00000529211.1	not organism-supported
ENST00000525788.1	not organism-supported
ENST00000644261.1	alternative 5' UTR
ENST00000314138.11	MANE_select
ENST00000530022.5	alternative 5' UTR
ENST00000526562.5	alternative 5' UTR
ENST00000530913.1	alternative 5' UTR
ENST00000313726.11	MANE_select
ENST00000313726.11	NP_998783
ENST00000530438.5	alternative 5' UTR
ENST00000533020.5	alternative 5' UTR
ENST00000532734.5	NAGNAG splice site
ENST00000528527.5	alternative 5' UTR
ENST00000526057.5	alternative 5' UTR
ENST00000530580.5	alternative 5' UTR
ENST00000531093.5	alternative 5' UTR
ENST00000533225.5	alternative 5' UTR
ENST00000526126.5	alternative 5' UTR
ENST00000528523.5	alternative 5' UTR
ENST00000533681.5	alternative 5' UTR
ENST00000526241.5	alternative 5' UTR
ENST00000530959.5	alternative 5' UTR
ENST00000526155.5	alternative 5' UTR
ENST00000534248.5	alternative 5' UTR
ENST00000527347.5	alternative 5' UTR
ENST00000527516.5	alternative 5' UTR
ENST00000527473.5	alternative 5' UTR
ENST00000530938.5	alternative 5' UTR
ENST00000533471.5	alternative 5' UTR
ENST00000524757.5	alternative 5' UTR
ENST00000527392.5	alternative 5' UTR
ENST00000526828.5	alternative 5' UTR
ENST00000525169.5	alternative 5' UTR
ENST00000534665.5	alternative 5' UTR
ENST00000531578.1	alternative 5' UTR
ENST00000309377.9	MANE_select
ENST00000524577.5	alternative 5' UTR
ENST00000534506.5	alternative 5' UTR
ENST00000396648.6	alternative 5' UTR
ENST00000534147.5	alternative 5' UTR
ENST00000326053.10	MANE_select
ENST00000326053.10	NP_065694
ENST00000531618.1	CCDS7795.1
ENST00000531618.1	NP_065697
ENST00000534025.6	MANE_select
ENST00000309134.9	alternative 5' UTR
ENST00000530136.1	alternative 5' UTR
ENST00000657967.1	Assembled from SLRseq reads (SRP049776)
ENST00000309166.8	MANE_select
ENST00000670061.1	Assembled from SLRseq reads (SRP049776)
ENST00000661716.1	Assembled from SLRseq reads (SRP049776)
ENST00000521394.3	Assembled from SLRseq reads (SRP049776)
ENST00000649792.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000649792.2	MANE_select
ENST00000663085.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000328194.8	MANE_select
ENST00000681173.1	NMD likely if extended
ENST00000299596.8	alternative 3' UTR
ENST00000528080.6	MANE_select
ENST00000379719.8	MANE_select
ENST00000531943.5	alternative 5' UTR
ENST00000396604.5	NAGNAG splice site
ENST00000438144.6	alternative 5' UTR
ENST00000396602.7	MANE_select
ENST00000534265.5	alternative 5' UTR
ENST00000412390.6	alternative 5' UTR
ENST00000414370.5	alternative 5' UTR
ENST00000417726.1	alternative 5' UTR
ENST00000450114.7	MANE_select
ENST00000299613.10	NP_001137448
ENST00000524612.5	CAGE supported TSS
ENST00000318950.11	MANE_select
ENST00000663578.1	Assembled from SLRseq reads (SRP049776)
ENST00000650092.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000658574.1	Assembled from SLRseq reads (SRP049776)
ENST00000664105.1	Assembled from SLRseq reads (SRP049776)
ENST00000667219.1	Assembled from SLRseq reads (SRP049776)
ENST00000278175.10	MANE_select
ENST00000528655.5	alternative 5' UTR
ENST00000525063.2	alternative 3' UTR
ENST00000528544.1	alternative 5' UTR
ENST00000532250.5	alternative 5' UTR
ENST00000524866.5	alternative 5' UTR
ENST00000529507.5	alternative 5' UTR
ENST00000529744.1	not organism-supported
ENST00000536684.3	MANE_select
ENST00000536684.3	not best-in-genome evidence
ENST00000265981.7	MANE_select
ENST00000533412.5	alternative 5' UTR
ENST00000663840.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671658.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000529829.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000529979.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000256178.8	MANE_select
ENST00000558540.5	NP_001093637.1
ENST00000534266.6	alternative 5' UTR
ENST00000534266.6	non canonical polymorphism
ENST00000526414.5	non canonical polymorphism
ENST00000532037.5	non canonical polymorphism
ENST00000361367.7	MANE_select
ENST00000526148.6	alternative 5' UTR
ENST00000526148.6	non-ATG start codon
ENST00000525681.6	alternative 5' UTR
ENST00000525681.6	non-ATG start codon
ENST00000339995.11	MANE_select
ENST00000339995.11	non-ATG start codon
ENST00000396525.7	non-ATG start codon
ENST00000528839.1	non-ATG start codon
ENST00000531416.6	non-ATG start codon
ENST00000532082.6	alternative 5' UTR
ENST00000532082.6	non-ATG start codon
ENST00000524932.6	alternative 5' UTR
ENST00000524932.6	non-ATG start codon
ENST00000527419.6	non-ATG start codon
ENST00000532570.6	alternative 5' UTR
ENST00000532570.6	confirm experimentally
ENST00000532570.6	non-ATG start codon
ENST00000530211.6	alternative 5' UTR
ENST00000530211.6	non-ATG start codon
ENST00000527526.6	non-ATG start codon
ENST00000530702.2	non-ATG start codon
ENST00000499765.2	Assembled from SLRseq reads (SRP049776)
ENST00000413761.7	MANE_select
ENST00000413761.7	alternative 5' UTR
ENST00000526020.5	alternative 5' UTR
ENST00000526852.5	alternative 5' UTR
ENST00000528289.5	alternative 5' UTR
ENST00000664276.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000501079.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664153.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669704.1	Assembled from SLRseq reads (SRP049776)
ENST00000658394.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000529014.6	Assembled from SLRseq reads (SRP049776)
ENST00000666098.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654337.1	Assembled from SLRseq reads (SRP049776)
ENST00000668046.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661618.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647635.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000227756.5	MANE_select
ENST00000528848.3	MANE_select
ENST00000662809.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000527733.7	MANE_select
ENST00000396505.7	alternative 5' UTR
ENST00000533813.5	alternative 5' UTR
ENST00000532179.5	alternative 5' UTR
ENST00000526065.1	alternative 5' UTR
ENST00000530823.1	alternative 5' UTR
ENST00000532420.1	alternative 5' UTR
ENST00000524685.5	alternative 5' UTR
ENST00000525119.5	alternative 5' UTR
ENST00000533389.1	alternative 5' UTR
ENST00000533534.2	alternative 5' UTR
ENST00000334956.15	MANE_select
ENST00000334956.15	upstream ATG
ENST00000656758.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000527636.7	MANE_select
ENST00000527636.7	NP_068780.2
ENST00000527376.3	alternative 5' UTR
ENST00000658243.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671253.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653758.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662291.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671577.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663902.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653958.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000526388.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000531402.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000534477.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000532541.6	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000653981.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667588.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000529419.3	MANE_select
ENST00000529050.5	alternative 5' UTR
ENST00000534544.5	alternative 5' UTR
ENST00000527998.5	alternative 5' UTR
ENST00000529388.6	NAGNAG splice site
ENST00000529388.6	alternative 5' UTR
ENST00000403510.8	NAGNAG splice site
ENST00000403510.8	alternative 5' UTR
ENST00000403290.6	MANE_select
ENST00000533520.5	alternative 5' UTR
ENST00000529825.6	alternative 5' UTR
ENST00000530357.6	alternative 5' UTR
ENST00000673626.1	NAGNAG splice site
ENST00000673626.1	alternative 3' UTR
ENST00000673892.1	NP_001025444
ENST00000673888.1	alternative 5' UTR
ENST00000482049.6	alternative 5' UTR
ENST00000278174.10	MANE_select
ENST00000529708.5	alternative 5' UTR
ENST00000526841.1	alternative 5' UTR
ENST00000661088.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000282091.6	MANE_select
ENST00000529816.1	alternative 5' UTR
ENST00000354817.8	MANE_select
ENST00000664710.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655374.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659648.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648524.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000655777.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657797.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668428.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000576479.4	MANE_select
ENST00000576479.4	rs5789821
ENST00000256196.9	MANE_select
ENST00000414023.6	alternative 5' UTR
ENST00000534746.5	alternative 5' UTR
ENST00000526063.5	alternative 5' UTR
ENST00000531421.5	alternative 5' UTR
ENST00000439561.7	MANE_select
ENST00000439561.7	alternative 5' UTR
ENST00000396394.7	MANE_select
ENST00000533068.5	alternative 5' UTR
ENST00000532256.1	alternative 5' UTR
ENST00000282096.9	MANE_select
ENST00000455098.2	alternative 5' UTR
ENST00000334636.10	MANE_select
ENST00000532805.1	non canonical polymorphism
ENST00000526489.5	NMD likely if extended
ENST00000526276.5	NMD likely if extended
ENST00000532641.1	NMD likely if extended
ENST00000529043.1	NMD likely if extended
ENST00000533448.1	alternative 3' UTR
ENST00000324229.11	MANE_select
ENST00000331587.9	MANE_select
ENST00000396372.2	alternative 5' UTR
ENST00000379556.8	MANE_select
ENST00000530161.5	alternative 5' UTR
ENST00000660777.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659618.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000636967.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657022.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000532242.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663676.1	Assembled from SLRseq reads (SRP049776)
ENST00000659436.1	Assembled from SLRseq reads (SRP049776)
ENST00000663478.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664817.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668376.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667221.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662912.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668712.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000530418.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669725.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670379.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664116.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670509.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666053.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664884.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000528252.5	NP_001139283
ENST00000527619.6	alternative 5' UTR
ENST00000533411.5	alternative 5' UTR
ENST00000526673.1	alternative 5' UTR
ENST00000529469.1	alternative 5' UTR
ENST00000228136.9	MANE_select
ENST00000531066.6	MANE_select
ENST00000530490.2	ENA ID EGAS00001001486
ENST00000648912.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000525634.6	MANE_select
ENST00000532035.1	alternative 5' UTR
ENST00000528644.5	alternative 5' UTR
ENST00000646648.1	non canonical conserved
ENST00000530527.5	alternative 5' UTR
ENST00000526120.5	alternative 5' UTR
ENST00000531172.5	alternative 5' UTR
ENST00000529010.6	MANE_select
ENST00000533738.6	alternative 5' UTR
ENST00000530964.5	alternative 5' UTR
ENST00000529313.5	alternative 5' UTR
ENST00000533926.5	alternative 5' UTR
ENST00000648634.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000338965.9	MANE_select
ENST00000530403.1	alternative 3' UTR
ENST00000339994.5	MANE_select
ENST00000526912.1	alternative 5' UTR
ENST00000644772.1	NAGNAG splice site
ENST00000644772.1	NP_001338224
ENST00000389817.8	MANE_select
ENST00000389817.8	NAGNAG splice site
ENST00000302539.9	LR annotation
ENST00000646993.1	NAGNAG splice site
ENST00000644484.1	NAGNAG splice site
ENST00000642271.1	NP_001338226
ENST00000643260.1	NP_001338225.1
ENST00000642902.1	NAGNAG splice site
ENST00000645760.1	NAGNAG splice site
ENST00000645076.1	NAGNAG splice site
ENST00000644472.1	NAGNAG splice site
ENST00000005226.12	MANE_select
ENST00000005226.12	NP_710142
ENST00000399397.6	MANE_select
ENST00000428619.1	NAGNAG splice site
ENST00000342528.2	FLJ46346
ENST00000524885.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670639.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658252.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667234.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000250003.4	MANE_select
ENST00000265969.8	MANE_select
ENST00000265969.8	NP_001106212.1
ENST00000265965.10	MANE_select
ENST00000530613.5	alternative 5' UTR
ENST00000532389.5	alternative 5' UTR
ENST00000524803.6	MANE_select
ENST00000621697.2	MANE_select
ENST00000648470.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000314254.3	MANE_select
ENST00000340135.3	alternative 5' UTR
ENST00000534640.1	alternative 3' UTR
ENST00000278222.7	MANE_select
ENST00000414546.6	NP_001120852
ENST00000529528.5	alternative 5' UTR
ENST00000256733.9	MANE_select
ENST00000526900.1	alternative 5' UTR
ENST00000532858.5	alternative 5' UTR
ENST00000649195.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000356524.9	MANE_select
ENST00000349215.8	MANE_select
ENST00000438420.6	alternative 5' UTR
ENST00000531848.1	not organism-supported
ENST00000453096.6	alternative 5' UTR
ENST00000265963.9	MANE_select
ENST00000525831.5	alternative 5' UTR
ENST00000543445.5	alternative 5' UTR
ENST00000535451.5	alternative 5' UTR
ENST00000422447.8	MANE_select
ENST00000478970.6	alternative 5' UTR
ENST00000495052.5	alternative 5' UTR
ENST00000379412.9	alternative 5' UTR
ENST00000542179.1	alternative 5' UTR
ENST00000541669.6	MANE_select
ENST00000280704.8	alternative 5' UTR
ENST00000280706.3	MANE_select
ENST00000280706.3	alternative 5' UTR
ENST00000251968.4	MANE_select
ENST00000396197.8	MANE_select
ENST00000542172.1	CAGE supported TSS
ENST00000336349.6	MANE_select
ENST00000280734.3	MANE_select
ENST00000513874.6	MANE_select
ENST00000513874.6	QC splicing correct
ENST00000477854.5	Made from Macaque cDNA
ENST00000477854.5	Translation different to that in Macaque
ENST00000358540.7	MANE_select
ENST00000657264.1	Assembled from SLRseq reads (SRP049776)
ENST00000329773.3	MANE_select
ENST00000399351.7	NP_001128711.1
ENST00000399351.7	non canonical U12
ENST00000525490.5	non canonical U12
ENST00000446113.7	MANE_select
ENST00000446113.7	non canonical U12
ENST00000265968.9	MANE_select
ENST00000265968.9	alternative 5' UTR
ENST00000649235.1	alternative 5' UTR
ENST00000649842.1	LR annotation
ENST00000250024.9	MANE_select
ENST00000250024.9	alternative 5' UTR
ENST00000396085.6	NP_892009
ENST00000349880.9	MANE_select
ENST00000349880.9	NP_660093
ENST00000530408.1	alternative 5' UTR
ENST00000524983.3	MANE_select
ENST00000530266.5	alternative 5' UTR
ENST00000451739.7	MANE_select
ENST00000421577.6	alternative 5' UTR
ENST00000443524.6	alternative 5' UTR
ENST00000532505.1	alternative 5' UTR
ENST00000437750.2	NP_001138638
ENST00000331079.11	MANE_select
ENST00000657767.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000525748.6	MANE_select
ENST00000357134.10	MANE_select
ENST00000532434.5	NP_963845
ENST00000664026.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648804.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000324559.9	MANE_select
ENST00000659342.1	Assembled from SLRseq reads (SRP049776)
ENST00000665562.1	Assembled from SLRseq reads (SRP049776)
ENST00000263160.4	MANE_select
ENST00000648880.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000534135.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653021.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000532380.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656032.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000327470.6	MANE_select
ENST00000528582.5	alternative 5' UTR
ENST00000533363.5	alternative 5' UTR
ENST00000278187.7	alternative 5' UTR
ENST00000534801.5	alternative 5' UTR
ENST00000532398.1	alternative 5' UTR
ENST00000354193.5	MANE_select
ENST00000528701.6	Assembled from SLRseq reads (SRP049776)
ENST00000663618.1	Assembled from SLRseq reads (SRP049776)
ENST00000499625.1	ENSEMBL transcript id:ENST00000499625 long non-coding RNA (lincRNA)
ENST00000661691.1	Assembled from SLRseq reads (SRP049776)
ENST00000532798.3	CAGE supported TSS
ENST00000532798.3	MANE_select
ENST00000661041.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668107.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667591.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000525512.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000336930.11	MANE_select
ENST00000526327.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000533942.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654912.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000256737.8	MANE_select
ENST00000668627.1	Assembled from SLRseq reads (SRP049776)
ENST00000524858.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000529533.6	MANE_select
ENST00000529533.6	NP_001128563
ENST00000527569.1	NP_001128564
ENST00000648230.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000396005.8	MANE_select
ENST00000318627.4	MANE_select
ENST00000263182.8	MANE_select
ENST00000263182.8	genebuild_only_MANE
ENST00000533566.5	alternative 5' UTR
ENST00000528583.5	alternative 5' UTR
ENST00000525090.1	alternative 5' UTR
ENST00000670273.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000328697.11	MANE_select
ENST00000379214.9	MANE_select
ENST00000278193.7	MANE_select
ENST00000666532.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650864.1	NAGNAG splice site
ENST00000651944.1	NAGNAG splice site
ENST00000652516.1	NAGNAG splice site
ENST00000650954.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651252.2	Assembled from SLRseq reads (SRP049776)
ENST00000652212.1	NAGNAG splice site
ENST00000651990.1	NAGNAG splice site
ENST00000651926.2	Assembled from SLRseq reads (SRP049776)
ENST00000501176.7	NAGNAG splice site
ENST00000651997.1	NAGNAG splice site
ENST00000651123.1	NAGNAG splice site
ENST00000650703.1	NAGNAG splice site
ENST00000660080.1	Assembled from SLRseq reads (SRP049776)
ENST00000439476.6	alternative 5' UTR
ENST00000525528.1	alternative 5' UTR
ENST00000533131.5	alternative 5' UTR
ENST00000533131.5	non canonical conserved
ENST00000356660.9	MANE_select
ENST00000356660.9	alternative 5' UTR
ENST00000418212.5	alternative 5' UTR
ENST00000533246.5	alternative 5' UTR
ENST00000530861.5	alternative 5' UTR
ENST00000395983.7	alternative 5' UTR
ENST00000532997.5	alternative 5' UTR
ENST00000395981.7	alternative 5' UTR
ENST00000395978.7	alternative 5' UTR
ENST00000263181.7	MANE_select
ENST00000407364.8	MANE_select
ENST00000303459.10	FLJ33979
ENST00000662190.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000511073.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666135.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000528553.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657392.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653616.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668970.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658603.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661544.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000527492.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000528119.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660254.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656975.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660023.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659640.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657882.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656808.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658163.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659062.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000328224.7	MANE_select
ENST00000669123.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662729.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000254122.8	alternative 5' UTR
ENST00000533718.2	CAGE supported TSS
ENST00000533718.2	MANE_select
ENST00000417547.1	alternative 5' UTR
ENST00000282032.4	MANE_select
ENST00000530909.1	alternative 5' UTR
ENST00000358117.10	MANE_select
ENST00000358117.10	NP_001138871
ENST00000528686.2	alternative 5' UTR
ENST00000531002.2	Assembled from SLRseq reads (SRP049776)
ENST00000663545.1	Assembled from SLRseq reads (SRP049776)
ENST00000597505.5	confirm experimentally
ENST00000465995.6	MANE_select
ENST00000530125.1	not organism-supported
ENST00000534812.5	alternative 5' UTR
ENST00000532287.6	MANE_select
ENST00000532287.6	alternative 5' UTR
ENST00000648582.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000529749.5	alternative 5' UTR
ENST00000530023.5	alternative 5' UTR
ENST00000379163.10	NAGNAG splice site
ENST00000350638.10	NAGNAG splice site
ENST00000640533.1	NAGNAG splice site
ENST00000640961.2	MANE_select
ENST00000640961.2	NP_061913.3
ENST00000640342.1	NAGNAG splice site
ENST00000474374.5	Genoscope mRNA only
ENST00000638184.1	NAGNAG splice site
ENST00000670707.1	Assembled from SLRseq reads (SRP049776)
ENST00000653409.1	Assembled from SLRseq reads (SRP049776)
ENST00000666717.1	Assembled from SLRseq reads (SRP049776)
ENST00000606377.7	alternative 5' UTR
ENST00000639386.2	CAGE supported TSS
ENST00000639386.2	LR annotation
ENST00000639386.2	alternative 5' UTR
ENST00000643871.1	CAGE supported TSS
ENST00000643871.1	LR annotation
ENST00000638914.3	CAGE supported TSS
ENST00000638914.3	LR annotation
ENST00000638914.3	alternative 5' UTR
ENST00000379132.8	alternative 5' UTR
ENST00000379109.7	alternative 5' UTR
ENST00000379129.7	alternative 5' UTR
ENST00000639916.1	alternative 5' UTR
ENST00000640368.2	CAGE supported TSS
ENST00000640368.2	MANE_select
ENST00000640368.2	alternative 5' UTR
ENST00000379107.7	alternative 5' UTR
ENST00000639409.1	alternative 5' UTR
ENST00000640975.1	alternative 5' UTR
ENST00000241001.13	alternative 5' UTR
ENST00000638629.1	CAGE supported TSS
ENST00000639548.1	CAGE supported TSS
ENST00000639548.1	alternative 5' UTR
ENST00000640125.1	CAGE supported TSS
ENST00000640125.1	alternative 5' UTR
ENST00000481563.6	CAGE supported TSS
ENST00000481563.6	alternative 5' UTR
ENST00000640287.1	alternative 5' UTR
ENST00000423822.7	alternative 5' UTR
ENST00000639061.1	alternative 5' UTR
ENST00000639061.1	upstream ATG
ENST00000640766.1	CAGE supported TSS
ENST00000640766.1	alternative 5' UTR
ENST00000379111.7	alternative 5' UTR
ENST00000639950.1	alternative 5' UTR
ENST00000638250.1	alternative 5' UTR
ENST00000379123.10	alternative 5' UTR
ENST00000524853.6	alternative 5' UTR
ENST00000640872.1	CAGE supported TSS
ENST00000640872.1	alternative 5' UTR
ENST00000639109.1	alternative 5' UTR
ENST00000638853.1	CAGE supported TSS
ENST00000638853.1	alternative 5' UTR
ENST00000640460.1	alternative 5' UTR
ENST00000638802.1	CAGE supported TSS
ENST00000638802.1	alternative 5' UTR
ENST00000638346.1	CAGE supported TSS
ENST00000638346.1	alternative 5' UTR
ENST00000638346.1	upstream ATG
ENST00000379115.9	alternative 5' UTR
ENST00000639006.1	CAGE supported TSS
ENST00000639006.1	alternative 5' UTR
ENST00000638762.1	CAGE supported TSS
ENST00000638762.1	alternative 5' UTR
ENST00000438681.6	alternative 5' UTR
ENST00000638878.1	CAGE supported TSS
ENST00000638878.1	alternative 5' UTR
ENST00000639943.1	alternative 5' UTR
ENST00000640431.1	alternative 5' UTR
ENST00000639034.2	CAGE supported TSS
ENST00000639034.2	LR annotation
ENST00000639079.1	CAGE supported TSS
ENST00000455099.6	alternative 5' UTR
ENST00000639920.1	alternative 5' UTR
ENST00000525535.2	alternative 5' UTR
ENST00000630360.1	KJ434992
ENST00000531962.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000054950.4	MANE_select
ENST00000525133.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667553.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649877.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000379079.8	LR annotation
ENST00000452863.10	LR annotation
ENST00000452863.10	MANE_select
ENST00000452863.10	Non-AUG (CTG) start codon studied in: PMID:8621495, Bruening W., et al. (1996) J Biol Chem. 271(15):8646-54; and PMID: 29040381, Lee KY, et al. (2017) Carcinogenesis 38(12):1228-1240
ENST00000379077.9	Non-AUG (CTG) start codon studied in: PMID:8621495, Bruening W., et al. (1996) J Biol Chem. 271(15):8646-54; and PMID: 29040381, Lee KY, et al. (2017) Carcinogenesis 38(12):1228-1240
ENST00000530998.5	NP_001185481.1
ENST00000332351.9	NP_000369.4
ENST00000332351.9	Non-AUG (CTG) start codon studied in: PMID:8621495, Bruening W., et al. (1996) J Biol Chem. 271(15):8646-54; and PMID: 29040381, Lee KY, et al. (2017) Carcinogenesis 38(12):1228-1240
ENST00000332351.9	confirm experimentally
ENST00000448076.9	NP_077742.3
ENST00000448076.9	Non-AUG (CTG) start codon studied in: PMID:8621495, Bruening W., et al. (1996) J Biol Chem. 271(15):8646-54; and PMID: 29040381, Lee KY, et al. (2017) Carcinogenesis 38(12):1228-1240
ENST00000639563.3	Non-AUG (CTG) start codon studied in: PMID:8621495, Bruening W., et al. (1996) J Biol Chem. 271(15):8646-54; and PMID: 29040381, Lee KY, et al. (2017) Carcinogenesis 38(12):1228-1240
ENST00000639563.3	confirm experimentally
ENST00000531120.6	MANE_select
ENST00000533439.1	alternative 5' UTR
ENST00000257836.4	MANE_select
ENST00000650167.2	CAGE supported TSS
ENST00000650167.2	MANE_select
ENST00000528155.1	alternative 5' UTR
ENST00000241051.8	MANE_select
ENST00000311388.7	NP_631899
ENST00000530419.5	alternative 5' UTR
ENST00000334274.9	MANE_select
ENST00000528107.5	alternative 5' UTR
ENST00000602733.5	alternative 5' UTR
ENST00000528898.1	alternative 5' UTR
ENST00000323959.9	MANE_select
ENST00000524827.6	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000438862.6	NP_001028677
ENST00000431742.2	NP_001028678
ENST00000524775.1	alternative 5' UTR
ENST00000647623.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000525975.5	alternative 5' UTR
ENST00000303296.9	MANE_select
ENST00000379016.7	NP_001041665
ENST00000531504.5	alternative 5' UTR
ENST00000658780.2	MANE_select
ENST00000379011.4	not organism-supported
ENST00000531145.1	confirm experimentally
ENST00000642928.2	MANE_select
ENST00000651785.1	LR annotation
ENST00000651785.1	alternative 5' UTR
ENST00000395850.9	alternative 5' UTR
ENST00000395850.9	upstream ATG
ENST00000415002.7	alternative 5' UTR
ENST00000445143.6	alternative 5' UTR
ENST00000437761.6	alternative 5' UTR
ENST00000527577.5	alternative 5' UTR
ENST00000528700.2	alternative 5' UTR
ENST00000265651.8	MANE_select
ENST00000525320.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000257818.3	MANE_select
ENST00000257818.3	NP_005565.2
ENST00000664488.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000341394.9	MANE_select
ENST00000532820.5	alternative 5' UTR
ENST00000531159.6	NP_001137502.1
ENST00000257829.8	MANE_select
ENST00000435224.3	MANE_select
ENST00000435224.3	NP_665803.2
ENST00000241052.5	Catalase
ENST00000241052.5	LR annotation
ENST00000241052.5	MANE_select
ENST00000257832.7	MANE_select
ENST00000257831.8	MANE_select
ENST00000530286.5	alternative 5' UTR
ENST00000395787.4	MANE_select
ENST00000448838.7	NP_001128496
ENST00000227868.9	MANE_select
ENST00000661581.1	Assembled from SLRseq reads (SRP049776)
ENST00000528086.5	NMD likely if extended
ENST00000428726.8	MANE_select
ENST00000278386.10	NP_001001392
ENST00000278379.9	MANE_select
ENST00000642769.1	alternative 3' UTR
ENST00000395753.6	alternative 5' UTR
ENST00000645303.1	upstream ATG
ENST00000644050.1	alternative 5' UTR
ENST00000644050.1	upstream ATG
ENST00000643000.1	alternative 5' UTR
ENST00000644299.1	alternative 5' UTR
ENST00000645194.1	alternative 5' UTR
ENST00000646080.1	CAGE supported TSS
ENST00000644868.1	CAGE supported TSS
ENST00000647104.1	alternative 5' UTR
ENST00000643454.1	CAGE supported TSS
ENST00000642578.1	alternative 5' UTR
ENST00000449068.2	alternative 5' UTR
ENST00000449068.2	upstream ATG
ENST00000646847.1	alternative 5' UTR
ENST00000645966.1	alternative 5' UTR
ENST00000619888.5	MANE_select
ENST00000527605.5	alternative 5' UTR
ENST00000534803.1	NMD likely if extended
ENST00000317811.6	MANE_select
ENST00000299413.7	MANE_select
ENST00000648434.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000649203.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000315571.6	MANE_select
ENST00000263401.10	MANE_select
ENST00000530639.6	MANE_select
ENST00000527172.5	alternative 5' UTR
ENST00000532121.5	alternative 5' UTR
ENST00000526728.5	alternative 5' UTR
ENST00000378867.7	alternative 5' UTR
ENST00000524380.5	alternative 5' UTR
ENST00000526682.5	alternative 5' UTR
ENST00000530252.1	alternative 5' UTR
ENST00000530050.5	alternative 5' UTR
ENST00000526679.1	alternative 5' UTR
ENST00000526995.6	MANE_select
ENST00000348124.5	alternative 5' UTR
ENST00000299440.6	MANE_select
ENST00000311485.8	MANE_select
ENST00000529083.1	alternative 5' UTR
ENST00000527033.5	alternative 5' UTR
ENST00000532616.1	alternative 5' UTR
ENST00000678060.1	alternative 5' UTR
ENST00000679072.1	alternative 5' UTR
ENST00000446510.6	alternative 5' UTR
ENST00000676979.1	alternative 5' UTR
ENST00000617650.5	alternative 5' UTR
ENST00000334307.10	MANE_select
ENST00000531554.6	alternative 5' UTR
ENST00000677116.1	alternative 5' UTR
ENST00000679022.1	alternative 5' UTR
ENST00000534635.5	alternative 5' UTR
ENST00000530697.6	alternative 5' UTR
ENST00000527108.6	alternative 5' UTR
ENST00000532470.3	alternative 5' UTR
ENST00000677673.1	alternative 3' UTR
ENST00000662265.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659609.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664639.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664750.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664750.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000649890.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000660482.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665044.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664652.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649415.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000528697.6	MANE_select
ENST00000528697.6	alternative 5' UTR
ENST00000527150.5	alternative 5' UTR
ENST00000530763.5	alternative 5' UTR
ENST00000533474.1	alternative 5' UTR
ENST00000650272.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000655470.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665237.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657598.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648000.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000659522.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667585.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000527828.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663570.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658612.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000527757.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657748.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000662615.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000531273.6	MANE_select
ENST00000531273.6	NP_001136402
ENST00000420461.6	NP_001136403
ENST00000039989.9	MANE_select
ENST00000664853.1	Assembled from SLRseq reads (SRP049776)
ENST00000278353.10	MANE_select
ENST00000656298.1	Assembled from SLRseq reads (SRP049776)
ENST00000302708.9	MANE_select
ENST00000524742.5	alternative 5' UTR
ENST00000664150.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000527960.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000617612.3	MANE_select
ENST00000617612.3	NP_001138505
ENST00000378832.1	MANE_select
ENST00000524990.5	alternative 5' UTR
ENST00000263776.9	MANE_select
ENST00000533404.1	alternative 5' UTR
ENST00000532479.1	alternative 5' UTR
ENST00000533608.7	MANE_select
ENST00000527014.1	alternative 5' UTR
ENST00000343631.3	alternative 5' UTR
ENST00000652299.1	LR annotation
ENST00000652299.1	MANE_select
ENST00000342935.7	NP_001020015.1
ENST00000532544.5	alternative 5' UTR
ENST00000525210.5	alternative 5' UTR
ENST00000227155.9	MANE_select
ENST00000524704.5	alternative 5' UTR
ENST00000525813.5	alternative 5' UTR
ENST00000533786.5	alternative 5' UTR
ENST00000533202.5	alternative 5' UTR
ENST00000520358.7	MANE_select
ENST00000520999.6	alternative 5' UTR
ENST00000395648.7	alternative 5' UTR
ENST00000525680.6	MANE_select
ENST00000525680.6	NP_006025.2
ENST00000533940.5	alternative 5' UTR
ENST00000528473.5	alternative 5' UTR
ENST00000533955.5	non-canonical splice donor site between exons 5 and 6
ENST00000525683.5	alternative 5' UTR
ENST00000533443.5	alternative 5' UTR
ENST00000530035.5	alternative 5' UTR
ENST00000527685.5	alternative 5' UTR
ENST00000533937.1	alternative 5' UTR
ENST00000525114.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670262.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654603.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670250.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656313.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654627.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000530656.5	AB527203
ENST00000530656.5	BC148347
ENST00000530656.5	NP_064614.2
ENST00000526442.5	alternative 5' UTR
ENST00000528980.1	not organism-supported
ENST00000020926.8	MANE_select
ENST00000667593.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668755.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670220.1	Assembled from SLRseq reads (SRP049776)
ENST00000660758.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669834.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669834.1	Assembled from SLRseq reads (SRP049776)
ENST00000656602.1	Assembled from SLRseq reads (SRP049776)
ENST00000664257.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669753.1	Assembled from SLRseq reads (SRP049776)
ENST00000655698.1	Assembled from SLRseq reads (SRP049776)
ENST00000659454.1	Assembled from SLRseq reads (SRP049776)
ENST00000662539.1	Assembled from SLRseq reads (SRP049776)
ENST00000654281.1	Assembled from SLRseq reads (SRP049776)
ENST00000665357.1	Assembled from SLRseq reads (SRP049776)
ENST00000308064.7	MANE_select
ENST00000652868.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000532307.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655705.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655835.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652577.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000659089.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661164.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669237.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656890.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658844.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667888.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000634976.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653278.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668883.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656614.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655793.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656185.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657629.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000614989.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662042.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663372.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664846.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000635284.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656680.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662837.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671129.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671390.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666738.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662518.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663259.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655580.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671368.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657457.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652789.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668032.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657975.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661516.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661653.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667439.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663855.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657436.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663286.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657891.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660407.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671473.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666193.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667281.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661509.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000442528.2	NP_001138737.1
ENST00000526817.1	alternative 5' UTR
ENST00000530471.1	alternative 5' UTR
ENST00000314134.4	MANE_select
ENST00000417225.6	NP_001120929.1
ENST00000443527.6	NP_066940.2
ENST00000616080.2	CAGE supported TSS
ENST00000616080.2	MANE_select
ENST00000241014.6	MANE_select
ENST00000449465.2	MANE_select
ENST00000449465.2	NP_001073915.2
ENST00000378750.10	MANE_select
ENST00000531526.5	alternative 5' UTR
ENST00000401752.6	MANE_select
ENST00000676320.1	MANE_select
ENST00000529734.5	alternative 5' UTR
ENST00000533757.5	alternative 5' UTR
ENST00000525438.5	alternative 5' UTR
ENST00000527782.5	alternative 5' UTR
ENST00000532010.5	alternative 5' UTR
ENST00000649677.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000663734.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669442.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000634971.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000530941.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000634553.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000635389.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653357.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000621158.5	MANE_select
ENST00000616094.1	non canonical genome sequence error
ENST00000343674.10	NP_963290.1
ENST00000532868.6	NP_963291.2
ENST00000531879.5	NAGNAG at exon 4
ENST00000524984.5	NAGNAG at exon 4
ENST00000527911.5	NP_001186195.1
ENST00000421244.6	NP_963291.1
ENST00000534215.5	NAGNAG at exon 4
ENST00000528173.5	NAGNAG at exon 3
ENST00000405308.6	alternative 5' UTR
ENST00000441869.5	alternative 5' UTR
ENST00000533952.5	alternative 5' UTR
ENST00000395566.9	MANE_select
ENST00000395566.9	alternative 5' UTR
ENST00000407067.1	alternative 5' UTR
ENST00000526606.1	alternative 5' UTR
ENST00000648317.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000326737.3	MANE_select
ENST00000529192.1	alternative 5' UTR
ENST00000532281.1	alternative 5' UTR
ENST00000580238.5	alternative 5' UTR
ENST00000579280.1	alternative 5' UTR
ENST00000581416.5	alternative 5' UTR
ENST00000529655.5	alternative 5' UTR
ENST00000581438.5	alternative 5' UTR
ENST00000583249.5	alternative 5' UTR
ENST00000526508.5	alternative 5' UTR
ENST00000578626.5	alternative 5' UTR
ENST00000577256.5	alternative 5' UTR
ENST00000582547.5	alternative 5' UTR
ENST00000395549.3	alternative 5' UTR
ENST00000311956.9	MANE_select
ENST00000525488.1	alternative 5' UTR
ENST00000311764.3	MANE_select
ENST00000311907.10	MANE_select
ENST00000529230.6	MANE_select
ENST00000527333.5	114019 -113976
ENST00000526496.1	alternative 5' UTR
ENST00000502049.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000378623.6	MANE_select
ENST00000668347.1	Assembled from SLRseq reads (SRP049776)
ENST00000278460.12	MANE_select
ENST00000524782.6	MANE_select
ENST00000298838.11	MANE_select
ENST00000532457.5	NAGNAG splice site
ENST00000528462.5	alternative 5' UTR
ENST00000531226.5	alternative 5' UTR
ENST00000525725.5	alternative 5' UTR
ENST00000530405.5	alternative 5' UTR
ENST00000524509.1	alternative 5' UTR
ENST00000622878.4	alternative 5' UTR
ENST00000614825.4	alternative 5' UTR
ENST00000256996.9	MANE_select
ENST00000672073.1	MANE_select
ENST00000436778.5	alternative 5' UTR
ENST00000444396.5	alternative 5' UTR
ENST00000457932.5	alternative 5' UTR
ENST00000412937.5	alternative 5' UTR
ENST00000449369.5	alternative 5' UTR
ENST00000437276.1	alternative 5' UTR
ENST00000441012.7	MANE_select
ENST00000405853.7	alternative 5' UTR
ENST00000395344.7	NP_001129416.1
ENST00000402192.6	NP_569832.2
ENST00000545968.6	LR annotation
ENST00000545968.6	MANE_select
ENST00000378538.8	MANE_select
ENST00000227163.8	NAGNAG splice site
ENST00000227163.8	NP_001129416.1
ENST00000666926.1	Assembled from SLRseq reads (SRP049776)
ENST00000659838.1	Assembled from SLRseq reads (SRP049776)
ENST00000655367.1	Assembled from SLRseq reads (SRP049776)
ENST00000532340.2	Assembled from SLRseq reads (SRP049776)
ENST00000362021.9	MANE_select
ENST00000602866.5	CAGE supported TSS
ENST00000298852.8	CAGE supported TSS
ENST00000298852.8	MANE_select
ENST00000527906.5	CAGE supported TSS
ENST00000526993.1	CAGE supported TSS
ENST00000298854.7	MANE_select
ENST00000543178.5	alternative 5' UTR
ENST00000535982.1	alternative 5' UTR
ENST00000528538.5	alternative 5' UTR
ENST00000526277.1	alternative 5' UTR
ENST00000263774.9	MANE_select
ENST00000326674.10	MANE_select
ENST00000430070.7	MANE_select
ENST00000538490.3	MANE_select
ENST00000538490.3	upstream ATG
ENST00000302514.4	MANE_select
ENST00000302503.8	MANE_select
ENST00000525123.6	MANE_select
ENST00000525123.6	non canonical conserved
ENST00000528244.5	non canonical conserved
ENST00000532595.5	non canonical conserved
ENST00000529154.5	alternative 5' UTR
ENST00000531835.1	non canonical conserved
ENST00000530969.1	alternative 5' UTR
ENST00000263773.10	MANE_select
ENST00000529863.1	NMD likely if extended
ENST00000418331.7	MANE_select
ENST00000440289.6	NP_001091973
ENST00000309562.3	MANE_select
ENST00000624868.1	LOF variant in other haplotypes
ENST00000320048.1	LOF variant in other haplotypes
ENST00000320048.1	MANE_select
ENST00000319988.1	MANE_select
ENST00000319856.5	MANE_select
ENST00000617704.1	MANE_select
ENST00000617704.1	confirm experimentally
ENST00000617704.1	not best-in-genome evidence
ENST00000256999.7	MANE_select
ENST00000555099.1	MANE_select
ENST00000335238.4	MANE_select
ENST00000661660.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660530.1	Assembled from SLRseq reads (SRP049776)
ENST00000319760.8	MANE_select
ENST00000328188.1	MANE_select
ENST00000417545.5	MANE_select
ENST00000641065.1	dllogan
ENST00000623907.1	LOF variant in other haplotypes
ENST00000623907.1	MANE_select
ENST00000641580.1	ENA ID EGAS00001001486
ENST00000641760.1	ENA ID EGAS00001001486
ENST00000641692.1	ENA ID EGAS00001001486
ENST00000641692.1	MANE_select
ENST00000314259.5	MANE_select
ENST00000314259.5	NCBI GEO ID GSE80249
ENST00000641440.1	ENA ID EGAS00001001486
ENST00000623930.1	LOF variant in other haplotypes
ENST00000623930.1	MANE_select
ENST00000335605.1	MANE_select
ENST00000625203.2	LOF variant in other haplotypes
ENST00000625203.2	MANE_select
ENST00000378397.1	MANE_select
ENST00000378396.1	MANE_select
ENST00000641564.1	ENA ID EGAS00001001486
ENST00000449290.6	MANE_select
ENST00000449290.6	NP_116070
ENST00000344514.1	MANE_select
ENST00000301532.3	MANE_select
ENST00000641071.2	dlogan
ENST00000278409.1	MANE_select
ENST00000641320.1	ENA ID EGAS00001001486
ENST00000641320.1	NCBI GEO ID GSE80249
ENST00000641257.1	ENA ID EGAS00001001486
ENST00000641818.1	ENA ID EGAS00001001486
ENST00000641168.1	ENA ID EGAS00001001486
ENST00000313503.2	ENA ID EGAS00001001486
ENST00000313503.2	MANE_select
ENST00000641311.1	ENA ID EGAS00001001486
ENST00000641311.1	alternative 5' UTR
ENST00000313472.3	MANE_select
ENST00000641489.1	ENA ID EGAS00001001486
ENST00000641913.1	ENA ID EGAS00001001486
ENST00000642058.1	ENA ID EGAS00001001486
ENST00000642058.1	MANE_select
ENST00000642058.1	alternative 5' UTR
ENST00000313447.1	MANE_select
ENST00000312298.1	MANE_select
ENST00000641465.1	ENA ID EGAS00001001486
ENST00000641661.1	ENA ID EGAS00001001486
ENST00000641661.1	NCBI GEO ID GSE80249
ENST00000641665.1	ENA ID EGAS00001001486
ENST00000641665.1	MANE_select
ENST00000641600.1	ENA ID EGAS00001001486
ENST00000641600.1	MANE_select
ENST00000641600.1	alternative 5' UTR
ENST00000641662.1	ENA ID EGAS00001001486
ENST00000641662.1	LOF variant in other haplotypes
ENST00000641689.1	ENA ID EGAS00001001486
ENST00000641689.1	LOF variant in other haplotypes
ENST00000641689.1	alternative 5' UTR
ENST00000302270.1	MANE_select
ENST00000623286.1	LOF variant in other haplotypes
ENST00000623286.1	MANE_select
ENST00000641310.1	ENA ID EGAS00001001486
ENST00000641599.1	ENA ID EGAS00001001486
ENST00000279791.1	MANE_select
ENST00000641993.1	ENA ID EGAS00001001486
ENST00000641993.1	MANE_select
ENST00000641241.1	ENA ID EGAS00001001486
ENST00000641241.1	NCBI GEO ID GSE80249
ENST00000641076.1	ENA ID EGAS00001001486
ENST00000641076.1	MANE_select
ENST00000641076.1	NCBI GEO ID GSE80249
ENST00000624596.1	LOF variant in other haplotypes
ENST00000641232.1	ENA ID EGAS00001001486
ENST00000642097.1	ENA ID EGAS00001001486
ENST00000641505.1	ENA ID EGAS00001001486
ENST00000641581.1	ENA ID EGAS00001001486
ENST00000641581.1	alternative 5' UTR
ENST00000641980.1	ENA ID EGAS00001001486
ENST00000641980.1	NAGNAG splice site
ENST00000641668.1	ENA ID EGAS00001001486
ENST00000635912.1	unitary_pseudogene
ENST00000497933.3	MANE_select
ENST00000528882.5	non canonical TEC
ENST00000358252.8	MANE_select
ENST00000532437.1	alternative 5' UTR
ENST00000530920.1	CAGE supported TSS
ENST00000527207.1	alternative 5' UTR
ENST00000278412.7	MANE_select
ENST00000263314.3	MANE_select
ENST00000287143.2	MANE_select
ENST00000311862.10	MANE_select
ENST00000525955.1	alternative 5' UTR
ENST00000395124.6	MANE_select
ENST00000395124.6	alternative 5' UTR
ENST00000529554.5	alternative 5' UTR
ENST00000530005.5	alternative 5' UTR
ENST00000525474.5	alternative 5' UTR
ENST00000529112.5	alternative 5' UTR
ENST00000529494.5	alternative 5' UTR
ENST00000533245.5	alternative 5' UTR
ENST00000533235.5	alternative 5' UTR
ENST00000524863.5	alternative 5' UTR
ENST00000532795.5	alternative 5' UTR
ENST00000533051.5	alternative 5' UTR
ENST00000529896.1	alternative 5' UTR
ENST00000526621.5	alternative 5' UTR
ENST00000530316.5	alternative 5' UTR
ENST00000529748.1	alternative 5' UTR
ENST00000532278.1	alternative 5' UTR
ENST00000335099.8	MANE_select
ENST00000278426.8	MANE_select
ENST00000528450.5	alternative 5' UTR
ENST00000533263.1	alternative 5' UTR
ENST00000257245.9	MANE_select
ENST00000525587.1	alternative 5' UTR
ENST00000525158.1	alternative 5' UTR
ENST00000287156.9	MANE_select
ENST00000527022.1	alternative 5' UTR
ENST00000405496.5	alternative 5' UTR
ENST00000278407.9	MANE_select
ENST00000676670.1	alternative 3' UTR
ENST00000670770.1	Assembled from SLRseq reads (SRP049776)
ENST00000300022.8	MANE_select
ENST00000534810.3	alternative 5' UTR
ENST00000524669.5	alternative 5' UTR
ENST00000534711.5	alternative 5' UTR
ENST00000681650.1	alternative 5' UTR
ENST00000533905.1	alternative 5' UTR
ENST00000525602.1	alternative 5' UTR
ENST00000533682.2	MANE_select
ENST00000287169.8	MANE_select
ENST00000337672.9	upstream ATG
ENST00000431606.4	upstream ATG
ENST00000278422.9	MANE_select
ENST00000534355.6	MANE_select
ENST00000388857.8	alternative 3' UTR
ENST00000528798.1	alternative 5' UTR
ENST00000527995.1	alternative 5' UTR
ENST00000358694.10	alternative 5' UTR
ENST00000529986.5	alternative 5' UTR
ENST00000532245.5	alternative 5' UTR
ENST00000532463.5	alternative 5' UTR
ENST00000534579.5	NAGNAG at exon 3
ENST00000399050.10	LR annotation
ENST00000399050.10	MANE_select
ENST00000673826.1	alternative 5' UTR
ENST00000673683.1	alternative 5' UTR
ENST00000674106.1	alternative 5' UTR
ENST00000641215.1	ENA ID EGAS00001001486
ENST00000335397.3	MANE_select
ENST00000526131.1	non canonical TEC
ENST00000641439.1	ENA ID EGAS00001001486
ENST00000641478.1	ENA ID EGAS00001001486
ENST00000641478.1	alternative 5' UTR
ENST00000641291.1	ENA ID EGAS00001001486
ENST00000641291.1	NCBI GEO ID GSE80249
ENST00000641544.1	ENA ID EGAS00001001486
ENST00000641544.1	LOF variant in other haplotypes
ENST00000316770.2	MANE_select
ENST00000395079.2	MANE_select
ENST00000357377.3	MANE_select
ENST00000641865.1	ENA ID EGAS00001001486
ENST00000641865.1	MANE_select
ENST00000641865.1	NCBI GEO ID GSE80249
ENST00000641342.2	ENA ID EGAS00001001486
ENST00000641342.2	MANE_select
ENST00000641342.2	alternative 5' UTR
ENST00000641921.1	ENA ID EGAS00001001486
ENST00000641921.1	alternative 5' UTR
ENST00000648438.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000395074.7	MANE_select
ENST00000316059.7	MANE_select
ENST00000361987.6	MANE_select
ENST00000344743.8	MANE_select
ENST00000344743.8	NP_964011
ENST00000529732.5	alternative 5' UTR
ENST00000287275.6	MANE_select
ENST00000532258.1	alternative 5' UTR
ENST00000525608.5	alternative 5' UTR
ENST00000532726.5	alternative 5' UTR
ENST00000663130.1	Assembled from SLRseq reads (SRP049776)
ENST00000527482.2	MANE_select
ENST00000534403.5	alternative 5' UTR
ENST00000343597.4	MANE_select
ENST00000532845.2	Assembled from SLRseq reads (SRP049776)
ENST00000658798.1	Assembled from SLRseq reads (SRP049776)
ENST00000528737.5	alternative 5' UTR
ENST00000675163.1	MANE_select
ENST00000675163.1	alternative 5' UTR
ENST00000675806.1	alternative 5' UTR
ENST00000529985.2	alternative 5' UTR
ENST00000527629.5	alternative 5' UTR
ENST00000531408.5	alternative 5' UTR
ENST00000533703.1	alternative 5' UTR
ENST00000531147.1	alternative 5' UTR
ENST00000227451.4	MANE_select
ENST00000361050.4	MANE_select
ENST00000641998.1	ENA ID EGAS00001001486
ENST00000641998.1	MANE_select
ENST00000641998.1	alternative 5' UTR
ENST00000641850.1	ENA ID EGAS00001001486
ENST00000641850.1	alternative 5' UTR
ENST00000641361.1	ENA ID EGAS00001001486
ENST00000641361.1	alternative 5' UTR
ENST00000641673.1	ENA ID EGAS00001001486
ENST00000641673.1	alternative 5' UTR
ENST00000302040.6	ENA ID EGAS00001001486
ENST00000302040.6	MANE_select
ENST00000641045.1	ENA ID EGAS00001001486
ENST00000641045.1	MANE_select
ENST00000530162.2	ENA ID EGAS00001001486
ENST00000313253.1	MANE_select
ENST00000641278.1	ENA ID EGAS00001001486
ENST00000641962.1	ENA ID EGAS00001001486
ENST00000641962.1	MANE_select
ENST00000641962.1	alternative 5' UTR
ENST00000659845.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661408.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661408.1	QC splicing correct
ENST00000533552.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661394.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653120.1	Assembled from SLRseq reads (SRP049776)
ENST00000263847.6	MANE_select
ENST00000300146.10	MANE_select
ENST00000307552.3	MANE_select
ENST00000337979.9	MANE_select
ENST00000529177.5	NP_001171511
ENST00000528805.1	confirm experimentally
ENST00000530221.1	alternative 3' UTR
ENST00000648249.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000300151.5	MANE_select
ENST00000257248.3	MANE_select
ENST00000257264.4	MANE_select
ENST00000278855.7	MANE_select
ENST00000395032.6	NP_001026836
ENST00000278865.8	MANE_select
ENST00000524868.1	alternative 5' UTR
ENST00000278888.8	MANE_select
ENST00000534596.5	alternative 5' UTR
ENST00000531531.1	alternative 5' UTR
ENST00000533409.1	alternative 5' UTR
ENST00000679385.1	alternative 5' UTR
ENST00000649552.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000681288.1	alternative 5' UTR
ENST00000681157.1	alternative 3' UTR
ENST00000337908.5	MANE_select
ENST00000651255.1	confirm experimentally
ENST00000425663.5	NMD likely if extended
ENST00000425663.5	confirm experimentally
ENST00000526086.5	NMD likely if extended
ENST00000526086.5	confirm experimentally
ENST00000528394.1	NMD likely if extended
ENST00000528394.1	confirm experimentally
ENST00000534016.5	NP_996823.1
ENST00000530614.5	alternative 5' UTR
ENST00000300184.8	MANE_select
ENST00000300187.11	MANE_select
ENST00000300190.7	MANE_select
ENST00000532491.5	alternative 5' UTR
ENST00000345732.9	MANE_select
ENST00000345732.9	alternative 5' UTR
ENST00000533306.6	upstream ATG
ENST00000016913.8	MANE_select
ENST00000530007.1	alternative 5' UTR
ENST00000378186.7	MANE_select
ENST00000300226.7	MANE_select
ENST00000529108.5	confirm experimentally
ENST00000529108.5	not best-in-genome evidence
ENST00000405633.4	MANE_select
ENST00000308287.2	MANE_select
ENST00000227520.10	MANE_select
ENST00000649393.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000332539.5	MANE_select
ENST00000278853.9	NP_997224.2
ENST00000227524.9	MANE_select
ENST00000227525.8	MANE_select
ENST00000536171.1	alternative 5' UTR
ENST00000543907.2	Assembled from SLRseq reads (SRP049776)
ENST00000453848.7	MANE_select
ENST00000453848.7	NAGNAG splice site
ENST00000005286.8	NAGNAG splice site
ENST00000536491.2	EnsCodingFull|3P|XLOC_012242|TCONS_00052096:31.155
ENST00000536784.6	EnsCodingFull|3P|XLOC_012242|TCONS_00052097:23.006
ENST00000538739.2	PLAR_transcripts
ENST00000681275.1	CHS.8864.6
ENST00000681882.1	HBMT00000247618.1:coding_mRNA
ENST00000681951.1	HBMT00000247619.1:coding_mRNA
ENST00000227880.8	MANE_select
ENST00000537307.1	not organism-supported
ENST00000681015.1	rgasp_Tho_hum_qbo_solid_GM12878
ENST00000313421.11	MANE_select
ENST00000664141.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659437.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000347785.8	MANE_select
ENST00000301765.10	MANE_select
ENST00000538036.1	alternative 5' UTR
ENST00000624057.1	confirm experimentally
ENST00000325558.11	MANE_select
ENST00000312403.10	MANE_select
ENST00000335613.10	MANE_select
ENST00000301764.12	MANE_select
ENST00000301764.12	non canonical U12
ENST00000681803.1	alternative 5' UTR
ENST00000451943.6	non canonical U12
ENST00000540166.5	non canonical U12
ENST00000538470.2	non canonical U12
ENST00000542337.5	alternative 5' UTR
ENST00000532173.6	alternative 5' UTR
ENST00000394900.8	MANE_select
ENST00000524968.1	alternative 5' UTR
ENST00000294072.9	MANE_select
ENST00000536915.5	alternative 5' UTR
ENST00000542361.5	alternative 5' UTR
ENST00000537364.5	alternative 5' UTR
ENST00000539128.5	alternative 5' UTR
ENST00000545361.5	alternative 5' UTR
ENST00000537680.5	alternative 5' UTR
ENST00000278826.11	MANE_select
ENST00000515837.7	MANE_select
ENST00000439958.8	MANE_select
ENST00000448745.5	alternative 5' UTR
ENST00000539952.5	alternative 5' UTR
ENST00000413232.5	alternative 5' UTR
ENST00000450000.5	alternative 5' UTR
ENST00000449811.5	alternative 5' UTR
ENST00000623232.1	confirm experimentally
ENST00000301761.7	MANE_select
ENST00000338608.7	MANE_select
ENST00000668526.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664822.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000378075.4	MANE_select
ENST00000539008.6	MANE_select
ENST00000623008.1	confirm experimentally
ENST00000667359.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669803.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664513.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658517.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669779.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000257215.10	MANE_select
ENST00000540717.1	not organism-supported
ENST00000278836.10	MANE_select
ENST00000278836.10	NAGNAG splice site
ENST00000537328.6	MANE_select
ENST00000305885.3	MANE_select
ENST00000535723.1	alternative 5' UTR
ENST00000574708.5	alternative 5' UTR
ENST00000278840.9	MANE_select
ENST00000350997.12	MANE_select
ENST00000278829.7	MANE_select
ENST00000531956.5	alternative 5' UTR
ENST00000534223.5	alternative 5' UTR
ENST00000394836.7	MANE_select
ENST00000378043.9	MANE_select
ENST00000273550.12	MANE_select
ENST00000529548.1	alternative 5' UTR
ENST00000658933.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658933.1	Assembled from SLRseq reads (SRP049776)
ENST00000649903.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000533896.5	alternative 5' UTR
ENST00000394818.8	MANE_select
ENST00000306238.3	MANE_select
ENST00000244930.6	MANE_select
ENST00000244926.4	MANE_select
ENST00000227918.3	MANE_select
ENST00000358585.3	MANE_select
ENST00000415229.6	MANE_select
ENST00000415229.6	alternative 5' UTR
ENST00000278282.3	MANE_select
ENST00000257247.11	NP_076965
ENST00000533365.5	alternative 5' UTR
ENST00000378024.9	MANE_select
ENST00000530285.5	alternative 5' UTR
ENST00000528508.5	alternative 5' UTR
ENST00000531324.1	alternative 5' UTR
ENST00000329251.5	MANE_select
ENST00000476907.6	MANE_select
ENST00000278823.7	MANE_select
ENST00000527204.5	alternative 5' UTR
ENST00000394773.7	MANE_select
ENST00000394773.7	NAGNAG splice site
ENST00000278845.8	NAGNAG splice site
ENST00000466886.5	alternative 5' UTR
ENST00000466671.5	alternative 5' UTR
ENST00000525801.1	alternative 5' UTR
ENST00000278833.4	MANE_select
ENST00000525947.1	alternative 5' UTR
ENST00000265471.10	MANE_select
ENST00000356638.8	MANE_select
ENST00000648273.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000330574.2	MANE_select
ENST00000524958.6	MANE_select
ENST00000354588.7	Lbh domain (PF15317): Cardiac transcription factor regulator, Developmental protein
ENST00000532208.5	Genoscope mRNA only
ENST00000532208.5	alternative 5' UTR
ENST00000528115.1	NMD likely if extended
ENST00000532971.2	MANE_select
ENST00000531323.1	upstream ATG
ENST00000377953.4	MANE_select
ENST00000377953.4	genebuild_only_MANE
ENST00000301935.10	MANE_select
ENST00000534176.1	alternative 5' UTR
ENST00000317449.5	MANE_select
ENST00000360796.10	CAGE supported TSS
ENST00000360796.10	MANE_select
ENST00000360796.10	NP_001116427
ENST00000679883.1	alternative 5' UTR
ENST00000407022.7	alternative 5' UTR
ENST00000421906.5	alternative 5' UTR
ENST00000448568.6	alternative 5' UTR
ENST00000524862.5	alternative 5' UTR
ENST00000533982.1	alternative 5' UTR
ENST00000532818.5	alternative 5' UTR
ENST00000464544.1	alternative 5' UTR
ENST00000530009.1	alternative 5' UTR
ENST00000528874.1	alternative 5' UTR
ENST00000294117.6	MANE_select
ENST00000301785.7	MANE_select
ENST00000530625.5	alternative 5' UTR
ENST00000316461.9	MANE_select
ENST00000532583.1	alternative 5' UTR
ENST00000532276.1	alternative 3' UTR
ENST00000530112.2	alternative 3' UTR
ENST00000394807.5	MANE_select
ENST00000394807.5	upstream ATG
ENST00000301788.12	MANE_select
ENST00000526261.1	alternative 5' UTR
ENST00000294168.8	MANE_select
ENST00000529509.1	alternative 5' UTR
ENST00000307366.8	MANE_select
ENST00000333449.9	MANE_select
ENST00000531709.6	NMD exception
ENST00000531709.6	NP_001074960.1
ENST00000294172.7	MANE_select
ENST00000294172.7	genebuild_only_MANE
ENST00000294179.8	MANE_select
ENST00000677401.1	align_id:3554692|asmbl_44857
ENST00000536401.1	alternative 3' UTR
ENST00000278856.9	MANE_select
ENST00000529106.5	alternative 5' UTR
ENST00000538098.2	alternative 5' UTR
ENST00000665371.1	Assembled from SLRseq reads (SRP049776)
ENST00000539921.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668048.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670323.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663967.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000537024.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000541578.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000541416.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000538654.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000540725.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658540.1	Assembled from SLRseq reads (SRP049776)
ENST00000661616.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661616.1	Assembled from SLRseq reads (SRP049776)
ENST00000660547.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670469.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670469.1	Assembled from SLRseq reads (SRP049776)
ENST00000664307.1	Assembled from SLRseq reads (SRP049776)
ENST00000655919.1	Assembled from SLRseq reads (SRP049776)
ENST00000671236.1	Assembled from SLRseq reads (SRP049776)
ENST00000544550.6	Assembled from SLRseq reads (SRP049776)
ENST00000660730.1	Assembled from SLRseq reads (SRP049776)
ENST00000660960.1	Assembled from SLRseq reads (SRP049776)
ENST00000662229.1	Assembled from SLRseq reads (SRP049776)
ENST00000670729.1	Assembled from SLRseq reads (SRP049776)
ENST00000663237.1	Assembled from SLRseq reads (SRP049776)
ENST00000535689.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000535689.6	Assembled from SLRseq reads (SRP049776)
ENST00000656268.1	Assembled from SLRseq reads (SRP049776)
ENST00000665512.1	Assembled from SLRseq reads (SRP049776)
ENST00000544983.2	Assembled from SLRseq reads (SRP049776)
ENST00000653690.1	Assembled from SLRseq reads (SRP049776)
ENST00000661936.1	Assembled from SLRseq reads (SRP049776)
ENST00000667655.1	Assembled from SLRseq reads (SRP049776)
ENST00000535076.6	Assembled from SLRseq reads (SRP049776)
ENST00000656240.1	Assembled from SLRseq reads (SRP049776)
ENST00000656589.1	Assembled from SLRseq reads (SRP049776)
ENST00000537965.6	Assembled from SLRseq reads (SRP049776)
ENST00000545920.2	Assembled from SLRseq reads (SRP049776)
ENST00000670502.1	Assembled from SLRseq reads (SRP049776)
ENST00000662400.1	Assembled from SLRseq reads (SRP049776)
ENST00000652879.1	Assembled from SLRseq reads (SRP049776)
ENST00000656241.1	Assembled from SLRseq reads (SRP049776)
ENST00000663092.1	Assembled from SLRseq reads (SRP049776)
ENST00000668309.1	Assembled from SLRseq reads (SRP049776)
ENST00000680729.1	align_id:3554755|asmbl_44920
ENST00000680002.1	align_id:3554773|asmbl_44938
ENST00000681467.1	align_id:3554747|asmbl_44912
ENST00000538084.2	align_id:3554751|asmbl_44916
ENST00000681569.1	align_id:3554745|asmbl_44910
ENST00000377891.6	NP_001012680.1
ENST00000680725.1	align_id:3554746|asmbl_44911
ENST00000681215.1	align_id:3554790|asmbl_44955
ENST00000544377.2	align_id:3554753|asmbl_44918
ENST00000544377.2	alternative 5' UTR
ENST00000680297.1	align_id:3554782|asmbl_44947
ENST00000680134.1	compmerge.1996.pooled.chr11
ENST00000680654.1	align_id:3554794|asmbl_44959
ENST00000681107.1	align_id:3554787|asmbl_44952
ENST00000338663.12	MANE_select
ENST00000681232.1	CAGE supported TSS
ENST00000681232.1	align_id:3554757|asmbl_44922
ENST00000541425.6	align_id:3554777|asmbl_44942
ENST00000536981.6	align_id:35547long_read_pipeline_2
ENST00000539891.6	align_id:3554769|asmbl_44934
ENST00000306960.4	MANE_select
ENST00000543973.1	alternative 5' UTR
ENST00000536524.1	alternative 5' UTR
ENST00000360421.9	MANE_select
ENST00000336232.7	MANE_select
ENST00000430500.6	alternative 5' UTR
ENST00000417740.5	non canonical polymorphism
ENST00000326192.5	non canonical polymorphism
ENST00000332793.11	MANE_select
ENST00000332793.11	NP_001034841.3
ENST00000279178.4	MANE_select
ENST00000540857.6	MANE_select
ENST00000655871.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000394618.9	MANE_select
ENST00000394618.9	upstream ATG
ENST00000340246.10	NAGNAG splice site
ENST00000340246.10	upstream ATG
ENST00000255688.8	MANE_select
ENST00000255695.2	MANE_select
ENST00000415826.3	MANE_select
ENST00000398868.8	MANE_select
ENST00000542238.5	262085  262212
ENST00000377819.10	MANE_select
ENST00000433688.2	MANE_select
ENST00000433688.2	Sw:C9JLR9.1 - is a Swiss-Prot isoform
ENST00000294244.9	MANE_select
ENST00000508192.5	NAGNAG splice site
ENST00000508192.5	NP_004945.4
ENST00000361128.9	NAGNAG splice site
ENST00000350490.11	NP_001156769
ENST00000402010.8	MANE_select
ENST00000502399.7	NP_059672
ENST00000543220.5	alternative 5' UTR
ENST00000540169.5	alternative 5' UTR
ENST00000509502.6	NP_059672
ENST00000301459.5	MANE_select
ENST00000377793.9	MANE_select
ENST00000314133.4	MANE_select
ENST00000428192.6	alternative 5' UTR
ENST00000538426.6	MANE_select
ENST00000255681.7	MANE_select
ENST00000305218.9	MANE_select
ENST00000345728.10	CAGE supported TSS
ENST00000345728.10	MANE_select
ENST00000317459.11	MANE_select
ENST00000546089.5	alternative 5' UTR
ENST00000539325.1	alternative 5' UTR
ENST00000279206.8	MANE_select
ENST00000279206.8	upstream ATG
ENST00000441250.6	NP_001122085
ENST00000441250.6	upstream ATG
ENST00000309422.7	MANE_select
ENST00000309366.9	MANE_select
ENST00000309366.9	alternative 5' UTR
ENST00000449942.6	alternative 5' UTR
ENST00000535135.7	CAGE supported TSS
ENST00000535135.7	alternative 5' UTR
ENST00000652094.1	CAGE supported TSS
ENST00000652762.2	MANE_select
ENST00000652762.2	NMD exception
ENST00000309318.8	MANE_select
ENST00000663760.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652899.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000279230.12	MANE_select
ENST00000540288.5	alternative 3' UTR
ENST00000394532.7	alternative 5' UTR
ENST00000309032.8	MANE_select
ENST00000493798.1	alternative 5' UTR
ENST00000538244.1	alternative 5' UTR
ENST00000539833.5	alternative 5' UTR
ENST00000535675.5	alternative 5' UTR
ENST00000543383.5	alternative 5' UTR
ENST00000538032.5	alternative 5' UTR
ENST00000438980.7	MANE_select
ENST00000540370.1	alternative 5' UTR
ENST00000422670.7	MANE_select
ENST00000394525.6	alternative 5' UTR
ENST00000539216.1	alternative 5' UTR
ENST00000328404.8	MANE_select
ENST00000328404.8	genebuild_only_MANE
ENST00000677967.1	NAGNAG splice site
ENST00000000442.11	MANE_select
ENST00000000442.11	NAGNAG splice site
ENST00000405666.5	NAGNAG splice site
ENST00000405666.5	alternative 5' UTR
ENST00000468670.2	alternative 5' UTR
ENST00000544844.6	MANE_select
ENST00000265462.9	MANE_select
ENST00000356786.10	MANE_select
ENST00000463837.5	novel transcript
ENST00000494080.5	novel transcript
ENST00000494566.5	FLJ37970
ENST00000494566.5	novel transcript
ENST00000492980.1	novel transcript
ENST00000479965.5	novel transcript
ENST00000473405.1	novel transcript
ENST00000472524.1	putaitve novel transcript
ENST00000334205.9	MANE_select
ENST00000666543.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000316124.3	FLJ37045
ENST00000670317.1	Assembled from SLRseq reads (SRP049776)
ENST00000444862.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000377585.7	FLJ26420
ENST00000301891.9	FLJ90743
ENST00000301891.9	MANE_select
ENST00000460745.1	FLJ90646
ENST00000377574.6	MANE_select
ENST00000473690.5	FLJ31175
ENST00000464307.5	FLJ40892
ENST00000377559.7	KIAA0921
ENST00000265459.11	MANE_select
ENST00000437746.1	not organism-supported
ENST00000464324.5	FLJ35533
ENST00000377494.5	FLJ35563
ENST00000377494.5	alternative 5' UTR
ENST00000421556.5	FLJ16161
ENST00000394432.8	MANE_select
ENST00000377497.7	alternative 5' UTR
ENST00000354024.7	alternative 5' UTR
ENST00000445445.5	non canonical conserved
ENST00000431822.5	alternative 5' UTR
ENST00000441258.5	non canonical conserved
ENST00000394430.5	FLJ42029
ENST00000483742.1	FLJ32985
ENST00000377432.7	FLJ32045
ENST00000164139.4	MANE_select
ENST00000377390.8	CAGE supported TSS
ENST00000377390.8	MANE_select
ENST00000681407.1	SRA:SRR9304713.181499.1
ENST00000633899.1	NMD likely if extended
ENST00000294066.7	MANE_select
ENST00000444560.1	NAGNAG splice site
ENST00000315422.9	alternative 5' UTR
ENST00000450708.7	MANE_select
ENST00000450708.7	alternative 5' UTR
ENST00000377326.7	alternative 5' UTR
ENST00000440873.6	alternative 5' UTR
ENST00000413626.1	alternative 5' UTR
ENST00000424912.1	alternative 5' UTR
ENST00000429702.5	alternative 5' UTR
ENST00000342711.6	MANE_select
ENST00000320631.8	MANE_select
ENST00000484846.1	FLJ44618
ENST00000359393.6	FLJ40523
ENST00000359393.6	alternative 5' UTR
ENST00000433803.1	alternative 5' UTR
ENST00000413053.2	FLJ35483
ENST00000377264.8	KIAA0404
ENST00000377264.8	MANE_select
ENST00000472525.1	novel transcript
ENST00000461701.5	novel transcript FLJ44193
ENST00000526559.5	alternative 5' UTR
ENST00000164133.7	MANE_select
ENST00000279168.7	MANE_select
ENST00000301896.6	MANE_select
ENST00000301887.9	MANE_select
ENST00000246747.9	MANE_select
ENST00000377244.8	MANE_select
ENST00000652489.1	MANE_select
ENST00000652489.1	genebuild_only_MANE
ENST00000358658.8	MANE_select
ENST00000355721.7	confirm experimentally
ENST00000356632.7	confirm experimentally
ENST00000525464.1	not organism-supported
ENST00000275517.8	MANE_select
ENST00000650243.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000294258.8	MANE_select
ENST00000526289.5	alternative 5' UTR
ENST00000526440.1	NMD likely if extended
ENST00000526334.5	alternative 5' UTR
ENST00000530719.6	MANE_select
ENST00000524603.1	not organism-supported
ENST00000528588.5	alternative 5' UTR
ENST00000279281.8	MANE_select
ENST00000530673.1	not organism-supported
ENST00000279263.14	MANE_select
ENST00000310597.6	MANE_select
ENST00000529639.6	MANE_select
ENST00000527548.5	alternative 5' UTR
ENST00000526555.5	alternative 5' UTR
ENST00000530451.1	not organism-supported
ENST00000377190.8	MANE_select
ENST00000526060.5	alternative 5' UTR
ENST00000279242.7	MANE_select
ENST00000528396.5	alternative 5' UTR
ENST00000529133.5	alternative 5' UTR
ENST00000527739.5	alternative 5' UTR
ENST00000526966.5	alternative 5' UTR
ENST00000533129.5	alternative 5' UTR
ENST00000524773.5	alternative 5' UTR
ENST00000279247.11	MANE_select
ENST00000279247.11	alternative 5' UTR
ENST00000532285.1	alternative 5' UTR
ENST00000527189.5	alternative 5' UTR
ENST00000531068.5	alternative 5' UTR
ENST00000527699.5	alternative 5' UTR
ENST00000533909.5	alternative 5' UTR
ENST00000527323.5	alternative 5' UTR
ENST00000655485.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000265465.8	MANE_select
ENST00000649896.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000652984.1	Assembled from SLRseq reads (SRP049776)
ENST00000666131.1	Assembled from SLRseq reads (SRP049776)
ENST00000279249.3	MANE_select
ENST00000533419.1	alternative 5' UTR
ENST00000528416.6	MANE_select
ENST00000309880.6	MANE_select
ENST00000526898.5	alternative 5' UTR
ENST00000533629.5	alternative 5' UTR
ENST00000530936.1	alternative 5' UTR
ENST00000529962.5	alternative 5' UTR
ENST00000524438.5	alternative 5' UTR
ENST00000317568.10	MANE_select
ENST00000525156.1	alternative 5' UTR
ENST00000501122.2	MIR612 host
ENST00000670617.1	Assembled from SLRseq reads (SRP049776)
ENST00000666139.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660598.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000622944.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650251.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650251.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000665037.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000270176.10	MANE_select
ENST00000420247.6	Isoform B
ENST00000301873.11	MANE_select
ENST00000309328.8	MANE_select
ENST00000449319.2	NP_001092254.1
ENST00000530349.2	MANE_select
ENST00000530349.2	NP_001092255.1
ENST00000533237.5	(Mus musculus)
ENST00000309295.9	MANE_select
ENST00000340313.5	MANE_select
ENST00000340313.5	NP_203133.1
ENST00000342202.8	NP_258416.1
ENST00000394217.6	NP_203134.1
ENST00000309100.8	MANE_select
ENST00000534313.6	MANE_select
ENST00000533361.1	alternative 5' UTR
ENST00000526137.1	alternative 5' UTR
ENST00000527525.5	alternative 5' UTR
ENST00000394224.3	alternative 5' UTR
ENST00000406246.8	MANE_select
ENST00000654110.1	Assembled from SLRseq reads (SRP049776)
ENST00000654031.1	Assembled from SLRseq reads (SRP049776)
ENST00000648185.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000341318.9	MANE_select
ENST00000534482.6	alternative 3' UTR
ENST00000308418.10	MANE_select
ENST00000644142.1	alternative 3' UTR
ENST00000532090.3	MANE_select
ENST00000335987.8	MANE_select
ENST00000525710.1	(Macaca mulatta)
ENST00000308162.10	MANE_select
ENST00000308162.10	genebuild_only_MANE
ENST00000531407.5	alternative 5' UTR
ENST00000524553.5	alternative 5' UTR
ENST00000532134.5	alternative 5' UTR
ENST00000530413.1	alternative 5' UTR
ENST00000534784.1	alternative 5' UTR
ENST00000526975.1	alternative 5' UTR
ENST00000308342.7	MANE_select
ENST00000308110.9	MANE_select
ENST00000307998.11	MANE_select
ENST00000526624.5	alternative 5' UTR
ENST00000527378.1	alternative 5' UTR
ENST00000307886.8	MANE_select
ENST00000357519.9	MANE_select
ENST00000312579.4	MANE_select
ENST00000312562.7	MANE_select
ENST00000438576.3	MANE_select
ENST00000438576.3	NP_001129107.1
ENST00000449692.3	NP_113638.2
ENST00000312515.7	MANE_select
ENST00000528573.1	NMD likely if extended
ENST00000312397.10	MANE_select
ENST00000526451.5	alternative 5' UTR
ENST00000533544.6	MANE_select
ENST00000533544.6	alternative 5' UTR
ENST00000529964.5	alternative 5' UTR
ENST00000527249.5	alternative 5' UTR
ENST00000530462.5	alternative 5' UTR
ENST00000532707.5	alternative 5' UTR
ENST00000527051.1	alternative 5' UTR
ENST00000445560.6	alternative 5' UTR
ENST00000530204.1	alternative 5' UTR
ENST00000312175.7	MANE_select
ENST00000533166.5	alternative 5' UTR
ENST00000527348.1	alternative 5' UTR
ENST00000312134.3	MANE_select
ENST00000312106.6	MANE_select
ENST00000312006.5	MANE_select
ENST00000527878.1	alternative 5' UTR
ENST00000659001.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000322535.11	MANE_select
ENST00000533421.2	NMD likely if extended
ENST00000320580.9	MANE_select
ENST00000531240.5	alternative 5' UTR
ENST00000526758.5	alternative 5' UTR
ENST00000440228.6	alternative 5' UTR
ENST00000394067.7	MANE_select
ENST00000394067.7	alternative 5' UTR
ENST00000461611.5	alternative 5' UTR
ENST00000475757.2	alternative 5' UTR
ENST00000394066.6	NP_001128246.1
ENST00000311481.11	MANE_select
ENST00000311445.7	MANE_select
ENST00000376901.9	MANE_select
ENST00000327259.5	MANE_select
ENST00000311330.4	MANE_select
ENST00000311320.9	MANE_select
ENST00000425825.6	NP_001020128.1
ENST00000359957.8	MANE_select
ENST00000530756.1	alternative 5' UTR
ENST00000311181.5	MANE_select
ENST00000649789.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000357440.7	MANE_select
ENST00000357440.7	alternative 5' UTR
ENST00000544554.5	alternative 5' UTR
ENST00000658173.1	Assembled from SLRseq reads (SRP049776)
ENST00000311034.7	MANE_select
ENST00000310999.11	MANE_select
ENST00000430466.6	NP_733934.1
ENST00000534488.5	NAGNAG splice site
ENST00000329819.4	NP_733935.1
ENST00000320740.12	MANE_select
ENST00000527230.1	alternative 5' UTR
ENST00000531863.5	NAGNAG splice site
ENST00000541961.5	CAGE supported TSS
ENST00000531272.6	CAGE supported TSS
ENST00000531272.6	NMD likely if extended
ENST00000532019.5	CAGE supported TSS
ENST00000526515.5	CAGE supported TSS
ENST00000526515.5	NAGNAG splice site
ENST00000530165.5	CAGE supported TSS
ENST00000533725.5	CAGE supported TSS
ENST00000544603.1	CAGE supported TSS
ENST00000544603.1	NMD likely if extended
ENST00000531314.1	alternative 5' UTR
ENST00000531354.2	alternative 5' UTR
ENST00000318312.12	MANE_select
ENST00000526035.5	NAGNAG splice site
ENST00000658548.1	Assembled from SLRseq reads (SRP049776)
ENST00000310442.5	MANE_select
ENST00000513398.2	MANE_select
ENST00000679160.1	NAGNAG splice site
ENST00000310325.10	MANE_select
ENST00000677005.1	NAGNAG splice site
ENST00000678154.1	Nanopore_NA12878: 44c2ab0a-2213-4e8b-b352-25920194c11c;
ENST00000678471.1	NAGNAG splice site
ENST00000524994.6	NAGNAG splice site
ENST00000679011.1	alternative 3' UTR
ENST00000679225.1	NAGNAG splice site
ENST00000677186.1	NMD likely if extended
ENST00000333861.5	MANE_select
ENST00000533244.6	MANE_select
ENST00000310137.5	MANE_select
ENST00000421355.1	There is support for this readthrough in PMID
ENST00000408993.6	alternative 5' UTR
ENST00000310092.12	MANE_select
ENST00000530235.1	alternative 5' UTR
ENST00000532968.1	alternative 5' UTR
ENST00000409406.1	alternative 5' UTR
ENST00000525754.5	alternative 5' UTR
ENST00000310046.9	MANE_select
ENST00000528106.2	QC splicing correct
ENST00000524637.1	not organism-supported
ENST00000533211.6	MANE_select
ENST00000527010.1	alternative 5' UTR
ENST00000651232.1	CAGE supported TSS
ENST00000540737.7	MANE_select
ENST00000525449.6	non canonical conserved
ENST00000309657.8	MANE_select
ENST00000525356.1	not organism-supported
ENST00000529047.6	alternative 5' UTR
ENST00000393960.7	MANE_select
ENST00000393960.7	alternative 5' UTR
ENST00000393955.6	alternative 5' UTR
ENST00000393958.7	CAGE supported TSS
ENST00000393958.7	LR annotation
ENST00000651036.1	alternative 5' UTR
ENST00000652125.1	alternative 5' UTR
ENST00000651854.1	alternative 5' UTR
ENST00000528224.2	alternative 5' UTR
ENST00000528403.6	alternative 5' UTR
ENST00000531614.6	alternative 5' UTR
ENST00000309602.5	MANE_select
ENST00000525457.5	alternative 5' UTR
ENST00000527043.6	MANE_select
ENST00000527043.6	alternative 5' UTR
ENST00000308831.7	MANE_select
ENST00000533360.2	NMD likely if extended
ENST00000529006.7	MANE_select
ENST00000652902.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000308595.10	MANE_select
ENST00000511455.7	MANE_select
ENST00000308127.9	MANE_select
ENST00000661765.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000307980.7	MANE_select
ENST00000312419.8	MANE_select
ENST00000312438.8	MANE_select
ENST00000376745.9	MANE_select
ENST00000677322.1	align_id:3556056|asmbl_46221
ENST00000677343.1	align_id:3556055|asmbl_46220
ENST00000679175.1	align_id:3556050|asmbl_46215
ENST00000527663.6	CAGE supported TSS
ENST00000532279.2	align_id:3556054|asmbl_46219
ENST00000526510.6	align_id:3556053|asmbl_46218
ENST00000542590.2	MANE_select
ENST00000556575.5	NAGNAG splice site
ENST00000524814.5	NMD likely if extended
ENST00000312629.10	MANE_select
ENST00000326294.4	MANE_select
ENST00000341356.10	MANE_select
ENST00000312457.2	MANE_select
ENST00000542233.1	QC splicing correct
ENST00000325656.7	MANE_select
ENST00000308022.7	MANE_select
ENST00000537601.5	CAGE supported TSS
ENST00000279146.8	MANE_select
ENST00000534749.5	alternative 5' UTR
ENST00000356404.8	MANE_select
ENST00000356404.8	genebuild_only_MANE
ENST00000301488.8	MANE_select
ENST00000294288.5	MANE_select
ENST00000398606.10	LR annotation
ENST00000398606.10	MANE_select
ENST00000446232.1	alternative 5' UTR
ENST00000647561.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000532303.5	alternative 5' UTR
ENST00000322776.11	MANE_select
ENST00000532343.5	alternative 5' UTR
ENST00000528314.1	alternative 5' UTR
ENST00000376693.3	MANE_select
ENST00000255082.8	MANE_select
ENST00000673966.1	alternative 5' UTR
ENST00000673966.1	non canonical polymorphism
ENST00000534425.6	non canonical polymorphism
ENST00000525827.6	alternative 5' UTR
ENST00000674110.1	alternative 5' UTR
ENST00000674110.1	non canonical polymorphism
ENST00000528756.5	alternative 5' UTR
ENST00000533962.2	alternative 5' UTR
ENST00000531881.6	alternative 5' UTR
ENST00000673873.1	alternative 5' UTR
ENST00000673873.1	non canonical polymorphism
ENST00000673808.1	non canonical polymorphism
ENST00000642027.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000227471.7	MANE_select
ENST00000610659.4	Known genomic sequence error (GRC ID HG-391) affecting CDS in exon 3. Missing C between -62347 & -62346 causing a frameshift
ENST00000342456.11	MANE_select
ENST00000453471.6	alternative 5' UTR
ENST00000313468.10	MANE_select
ENST00000526339.5	alternative 5' UTR
ENST00000525628.1	alternative 5' UTR
ENST00000265686.8	MANE_select
ENST00000529657.1	alternative 5' UTR
ENST00000265689.9	MANE_select
ENST00000530842.2	Assembled from SLRseq reads (SRP049776)
ENST00000304363.9	MANE_select
ENST00000401547.6	alternative 5' UTR
ENST00000453170.5	alternative 5' UTR
ENST00000434573.1	alternative 5' UTR
ENST00000304271.11	MANE_select
ENST00000527280.1	alternative 5' UTR
ENST00000668632.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000294304.12	MANE_select
ENST00000528635.5	alternative 5' UTR
ENST00000533127.5	alternative 5' UTR
ENST00000529344.5	alternative 5' UTR
ENST00000393800.7	MANE_select
ENST00000531244.1	alternative 5' UTR
ENST00000265643.4	MANE_select
ENST00000255087.10	MANE_select
ENST00000543240.1	alternative 3' UTR
ENST00000265641.10	MANE_select
ENST00000265641.10	alternative 5' UTR
ENST00000450904.6	NP_852616.1
ENST00000362034.7	MANE_select
ENST00000676228.1	Snaptron_GTEX
ENST00000676228.1	intropolis
ENST00000255078.8	MANE_select
ENST00000674955.1	SLR-seq_HsBN_lib6
ENST00000675142.1	PacBio_RACEseq
ENST00000674583.1	PacBio_RACEseq
ENST00000675873.1	PacBio_RACEseq
ENST00000675674.1	NMD likely if extended
ENST00000675674.1	pacbio_raceseq
ENST00000539224.2	Ensembl_RNAseq_introns
ENST00000539224.2	PacBio_RACEseq
ENST00000539224.2	Snaptroqn_GTEX
ENST00000675800.1	Snaptron_GTEX
ENST00000675800.1	intropolis_filtered
ENST00000674729.1	Snaptron_GTEX
ENST00000674729.1	intropolis_filtered
ENST00000674597.1	Snaptron_GTEX
ENST00000674597.1	intropolis_filtered
ENST00000675469.1	Snaptron_GTEX
ENST00000675469.1	intropolis_filtered
ENST00000675683.1	Snaptron_GTEX
ENST00000675683.1	intropolis_filtered
ENST00000675118.1	Nanopore_NA12878
ENST00000675118.1	Snaptron_GTEX
ENST00000675118.1	intropolis_filtered
ENST00000676239.1	Snaptron_GTEX
ENST00000675464.1	Snaptron_GTEX
ENST00000675464.1	intropolis_filtered
ENST00000675119.1	Snaptron_GTEX
ENST00000675305.1	intropolis_filtered
ENST00000675648.1	SLR-seq_HsBN_lib7
ENST00000675648.1	Snaptron_GTEX
ENST00000674775.1	Ensembl_RNAseq_introns_breast_brain
ENST00000675684.1	Ensembl_RNAseq_introns_testes
ENST00000675493.1	Snaptron_GTEX
ENST00000674745.1	Snaptron_GTEX
ENST00000674745.1	intropolis_filtered
ENST00000676400.1	Snaptron_GTEX
ENST00000676400.1	intropolis_filtered
ENST00000676240.1	Snaptron_GTEX
ENST00000676083.1	Snaptron_GTEX
ENST00000674698.1	Snaptron_GTEX
ENST00000675755.1	Snaptron_GTEX
ENST00000675755.1	intropolis_filtered
ENST00000675310.1	Snaptron_GTEX
ENST00000675310.1	intropolis_filtered
ENST00000676149.1	Snaptron_GTEX
ENST00000676149.1	intropolis_filtered
ENST00000536803.2	Snaptron_GTEX
ENST00000536803.2	intropolis_filtered
ENST00000675997.1	Snaptron_GTEX
ENST00000675205.1	Snaptron_GTEX
ENST00000674672.1	Snaptron_GTEX
ENST00000674672.1	intropolis_filtered
ENST00000675964.1	Snaptron_GTEX
ENST00000676182.1	Ensembl_RNAseq_introns_testes
ENST00000676182.1	Snaptron_GTEX
ENST00000676182.1	intropolis_filtered
ENST00000675389.1	Snaptron_GTEX
ENST00000674878.1	Snaptron_GTEX
ENST00000674878.1	intropolis_filtered
ENST00000674675.1	Snaptron_GTEX
ENST00000674675.1	intropolis_filtered
ENST00000675916.1	Nanopore_NA12878
ENST00000675916.1	Snaptron_GTEX
ENST00000675916.1	intropolis_filtered
ENST00000309106.3	MANE_select
ENST00000309099.7	MANE_select
ENST00000294309.8	MANE_select
ENST00000641568.1	NMD exception
ENST00000641280.1	CAGE supported TSS
ENST00000308946.3	alternative 5' UTR
ENST00000644563.1	CAGE supported TSS
ENST00000227507.3	MANE_select
ENST00000538554.6	non canonical TEC
ENST00000279147.9	MANE_select
ENST00000294312.4	MANE_select
ENST00000168712.3	MANE_select
ENST00000334134.4	CAGE supported TSS
ENST00000334134.4	LR annotation
ENST00000334134.4	MANE_select
ENST00000531300.1	QC splicing correct
ENST00000301838.5	MANE_select
ENST00000253925.12	MANE_select
ENST00000530746.1	alternative 5' UTR
ENST00000532024.1	alternative 5' UTR
ENST00000648755.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000346329.7	NP_612632.1
ENST00000301843.13	MANE_select
ENST00000527962.5	alternative 5' UTR
ENST00000601538.6	MANE_select
ENST00000659264.1	CAGE supported TSS
ENST00000445654.2	non canonical polymorphism
ENST00000460048.1	not organism-supported
ENST00000624018.1	confirm experimentally
ENST00000663650.1	Assembled from SLRseq reads (SRP049776)
ENST00000624943.1	confirm experimentally
ENST00000669066.1	Assembled from SLRseq reads (SRP049776)
ENST00000355527.8	MANE_select
ENST00000407721.6	alternative 5' UTR
ENST00000526780.5	alternative 5' UTR
ENST00000525346.5	alternative 5' UTR
ENST00000531364.5	alternative 5' UTR
ENST00000527452.1	alternative 5' UTR
ENST00000319023.7	MANE_select
ENST00000529840.5	alternative 5' UTR
ENST00000398536.6	MANE_select
ENST00000398534.4	MANE_select
ENST00000528743.4	MANE_select
ENST00000528743.4	upstream ATG
ENST00000661699.1	Assembled from SLRseq reads (SRP049776)
ENST00000398531.3	MANE_select
ENST00000398530.1	MANE_select
ENST00000664227.1	Assembled from SLRseq reads (SRP049776)
ENST00000657407.1	Assembled from SLRseq reads (SRP049776)
ENST00000665956.1	Assembled from SLRseq reads (SRP049776)
ENST00000670269.1	Assembled from SLRseq reads (SRP049776)
ENST00000661578.1	Assembled from SLRseq reads (SRP049776)
ENST00000648998.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000426628.6	NP_001093123.1
ENST00000525199.1	not best-in-genome evidence
ENST00000328698.2	MANE_select
ENST00000533047.5	alternative 5' UTR
ENST00000534704.5	alternative 5' UTR
ENST00000528184.1	alternative 5' UTR
ENST00000530210.1	MANE_select
ENST00000530210.1	not best-in-genome evidence
ENST00000361756.8	MANE_select
ENST00000393705.8	alternative 5' UTR
ENST00000393703.9	MANE_select
ENST00000337131.9	alternative 5' UTR
ENST00000393695.8	MANE_select
ENST00000542977.5	alternative 5' UTR
ENST00000537217.5	alternative 5' UTR
ENST00000544238.5	alternative 5' UTR
ENST00000543937.5	alternative 5' UTR
ENST00000543009.5	alternative 5' UTR
ENST00000537930.5	alternative 5' UTR
ENST00000544129.5	alternative 5' UTR
ENST00000535947.5	alternative 5' UTR
ENST00000535087.5	alternative 5' UTR
ENST00000368959.9	alternative 5' UTR
ENST00000541719.5	alternative 5' UTR
ENST00000366394.7	alternative 5' UTR
ENST00000541641.5	alternative 5' UTR
ENST00000535111.5	alternative 5' UTR
ENST00000535838.5	alternative 5' UTR
ENST00000546131.1	alternative 5' UTR
ENST00000538413.6	alternative 5' UTR
ENST00000642648.1	alternative 5' UTR
ENST00000642813.1	NAGNAG splice site
ENST00000642813.1	NMD likely if extended
ENST00000647530.1	alternative 5' UTR
ENST00000642510.1	alternative 5' UTR
ENST00000536917.2	alternative 5' UTR
ENST00000538478.5	alternative 5' UTR
ENST00000542846.5	alternative 5' UTR
ENST00000278671.10	MANE_select
ENST00000538117.5	NAGNAG splice site
ENST00000543587.5	NAGNAG splice site
ENST00000545680.5	alternative 5' UTR
ENST00000542531.5	NAGNAG splice site
ENST00000542531.5	alternative 5' UTR
ENST00000535234.5	alternative 5' UTR
ENST00000545944.5	alternative 5' UTR
ENST00000538393.5	NAGNAG splice site
ENST00000538393.5	alternative 5' UTR
ENST00000535503.5	NAGNAG splice site
ENST00000535503.5	alternative 5' UTR
ENST00000538919.5	alternative 5' UTR
ENST00000537644.5	NAGNAG splice site
ENST00000545333.5	alternative 5' UTR
ENST00000539395.1	NAGNAG splice site
ENST00000539395.1	alternative 5' UTR
ENST00000612844.4	upstream ATG
ENST00000611028.3	MANE_select
ENST00000611028.3	NP_000795.2
ENST00000393681.6	alternative 5' UTR
ENST00000675784.1	alternative 5' UTR
ENST00000393679.5	alternative 5' UTR
ENST00000393676.5	MANE_select
ENST00000393676.5	alternative 5' UTR
ENST00000539412.5	NAGNAG splice site
ENST00000298223.11	MANE_select
ENST00000535625.5	alternative 5' UTR
ENST00000321324.11	alternative 5' UTR
ENST00000540973.1	alternative 5' UTR
ENST00000543234.1	alternative 5' UTR
ENST00000298229.7	MANE_select
ENST00000537656.1	alternative 5' UTR
ENST00000298231.5	MANE_select
ENST00000650022.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000294053.9	CAGE supported TSS
ENST00000538039.6	CAGE supported TSS
ENST00000538039.6	LR annotation
ENST00000538039.6	MANE_select
ENST00000642288.1	CAGE supported TSS
ENST00000544683.5	CAGE supported TSS
ENST00000539148.3	CAGE supported TSS
ENST00000445069.4	NMD likely if extended
ENST00000334456.10	MANE_select
ENST00000544570.5	NP_001137311
ENST00000538749.5	alternative 5' UTR
ENST00000393609.8	MANE_select
ENST00000429686.5	NP_001128662
ENST00000427971.6	alternative 5' UTR
ENST00000669205.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000334805.11	MANE_select
ENST00000334805.11	alternative 5' UTR
ENST00000537947.5	alternative 5' UTR
ENST00000542989.5	alternative 5' UTR
ENST00000546314.5	alternative 5' UTR
ENST00000536290.5	alternative 5' UTR
ENST00000536377.5	NMD likely if extended
ENST00000540587.1	alternative 5' UTR
ENST00000321297.10	MANE_select
ENST00000409418.9	MANE_select
ENST00000432043.2	NAGNAG splice site
ENST00000660457.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000393597.7	MANE_select
ENST00000393597.7	alternative 5' UTR
ENST00000393596.2	alternative 5' UTR
ENST00000393592.7	alternative 5' UTR
ENST00000540342.6	alternative 5' UTR
ENST00000542092.5	alternative 5' UTR
ENST00000349767.6	alternative 5' UTR
ENST00000618468.5	alternative 5' UTR
ENST00000393591.5	alternative 5' UTR
ENST00000393590.3	alternative 5' UTR
ENST00000540124.6	MANE_select
ENST00000540124.6	alternative 5' UTR
ENST00000535931.2	alternative 5' UTR
ENST00000544437.6	alternative 5' UTR
ENST00000680955.1	alternative 5' UTR
ENST00000538328.2	alternative 5' UTR
ENST00000263674.4	MANE_select
ENST00000064780.7	MANE_select
ENST00000545687.5	alternative 5' UTR
ENST00000393580.2	alternative 5' UTR
ENST00000356467.5	MANE_select
ENST00000542598.5	QC splicing correct
ENST00000354190.10	MANE_select
ENST00000545798.5	alternative 5' UTR
ENST00000535582.5	alternative 5' UTR
ENST00000543524.5	alternative 5' UTR
ENST00000541597.5	alternative 5' UTR
ENST00000535129.5	alternative 5' UTR
ENST00000542389.5	alternative 5' UTR
ENST00000336083.8	MANE_select
ENST00000310614.12	MANE_select
ENST00000497094.6	alternative 5' UTR
ENST00000535277.5	alternative 5' UTR
ENST00000398483.7	alternative 5' UTR
ENST00000537007.5	alternative 5' UTR
ENST00000314282.7	alternative 5' UTR
ENST00000355693.5	MANE_select
ENST00000545127.1	alternative 5' UTR
ENST00000537289.1	alternative 5' UTR
ENST00000541951.5	alternative 5' UTR
ENST00000504441.6	alternative 5' UTR
ENST00000543814.5	alternative 5' UTR
ENST00000542293.5	NAGNAG splice site
ENST00000542293.5	alternative 5' UTR
ENST00000310571.8	MANE_select
ENST00000544552.5	NAGNAG splice site
ENST00000544552.5	alternative 5' UTR
ENST00000339764.6	MANE_select
ENST00000537753.5	alternative 5' UTR
ENST00000663595.2	MANE_select
ENST00000539764.1	alternative 5' UTR
ENST00000660751.1	CAGE supported TSS
ENST00000314032.9	MANE_select
ENST00000544614.1	alternative 5' UTR
ENST00000334126.12	CAGE supported TSS
ENST00000334126.12	MANE_select
ENST00000681291.1	alternative 3' UTR
ENST00000681385.1	alternative 3' UTR
ENST00000679415.1	alternative 3' UTR
ENST00000542710.3	non canonical U12
ENST00000328257.13	MANE_select
ENST00000328257.13	non canonical U12
ENST00000398427.6	non canonical U12
ENST00000544401.2	non canonical U12
ENST00000331597.9	MANE_select
ENST00000298198.5	MANE_select
ENST00000524441.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662095.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662095.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000310128.9	MANE_select
ENST00000525550.1	alternative 5' UTR
ENST00000532569.5	alternative 5' UTR
ENST00000531854.5	alternative 5' UTR
ENST00000529425.5	alternative 5' UTR
ENST00000526855.1	alternative 5' UTR
ENST00000310109.5	MANE_select
ENST00000528481.5	alternative 5' UTR
ENST00000263681.7	MANE_select
ENST00000530511.5	alternative 5' UTR
ENST00000531615.1	alternative 5' UTR
ENST00000376332.8	MANE_select
ENST00000299563.5	MANE_select
ENST00000527301.1	alternative 3' UTR
ENST00000525407.5	alternative 5' UTR
ENST00000528219.5	alternative 5' UTR
ENST00000531852.5	alternative 5' UTR
ENST00000649255.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000655254.1	Assembled from RACEseq reads
ENST00000263672.11	MANE_select
ENST00000263672.11	non-canonical splice sites between exons 3 and 4
ENST00000531509.5	alternative 5' UTR
ENST00000529024.1	alternative 3' UTR
ENST00000294064.9	MANE_select
ENST00000294064.9	NP_006647
ENST00000641383.1	dlogan
ENST00000647690.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000641541.1	ENA ID EGAS00001001486
ENST00000641593.1	ENA ID EGAS00001001486
ENST00000641593.1	alternative 5' UTR
ENST00000641504.1	ENA ID EGAS00001001486
ENST00000641504.1	alternative 5' UTR
ENST00000641931.1	ENA ID EGAS00001001486
ENST00000641931.1	alternative 5' UTR
ENST00000531713.5	alternative 5' UTR
ENST00000289575.10	MANE_select
ENST00000525650.5	NP_001138684
ENST00000530556.5	alternative 5' UTR
ENST00000534004.5	alternative 5' UTR
ENST00000527180.5	alternative 5' UTR
ENST00000525845.5	alternative 5' UTR
ENST00000534186.5	alternative 5' UTR
ENST00000428359.6	NP_001138683
ENST00000657165.1	Assembled from SLRseq reads (SRP049776)
ENST00000668494.1	Assembled from SLRseq reads (SRP049776)
ENST00000562197.3	MANE_select
ENST00000420843.7	MANE_select
ENST00000531188.6	MANE_select
ENST00000527446.5	alternative 3' UTR
ENST00000528847.1	alternative 5' UTR
ENST00000376292.8	CAGE supported TSS
ENST00000539798.2	Evidence: mouse AK013012.1, BQ573536.1 and Swiss-Prot isoform Q9CZ49.2; human Swiss-Prot isoform Q6PF15.3
ENST00000539798.2	NP_001034637.2
ENST00000539798.2	upstream ATG
ENST00000529721.5	alternative 5' UTR
ENST00000336898.8	MANE_select
ENST00000532435.5	alternative 5' UTR
ENST00000649490.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000526397.5	alternative 5' UTR
ENST00000529643.1	alternative 5' UTR
ENST00000358171.8	CAGE supported TSS
ENST00000358171.8	MANE_select
ENST00000358171.8	alternative 5' UTR
ENST00000532356.5	alternative 5' UTR
ENST00000524558.5	alternative 5' UTR
ENST00000533449.6	alternative 5' UTR
ENST00000528990.1	alternative 5' UTR
ENST00000525611.5	alternative 5' UTR
ENST00000528760.1	alternative 5' UTR
ENST00000304771.8	MANE_select
ENST00000198801.10	MANE_select
ENST00000604935.5	alternative 5' UTR
ENST00000228027.12	MANE_select
ENST00000605099.1	alternative 5' UTR
ENST00000653975.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000356136.8	MANE_select
ENST00000528264.1	alternative 5' UTR
ENST00000533454.5	alternative 5' UTR
ENST00000532130.1	alternative 5' UTR
ENST00000322563.8	MANE_select
ENST00000529461.1	alternative 5' UTR
ENST00000260045.8	MANE_select
ENST00000529331.2	MANE_select
ENST00000321844.6	NP_001269385.1
ENST00000658868.1	Assembled from SLRseq reads (SRP049776)
ENST00000663202.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663082.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656117.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000260061.9	MANE_select
ENST00000404995.5	alternative 3' UTR
ENST00000421973.1	alternative 5' UTR
ENST00000667039.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000533752.1	alternative 5' UTR
ENST00000333090.5	MANE_select
ENST00000525167.1	alternative 5' UTR
ENST00000527881.1	alternative 5' UTR
ENST00000532485.6	MANE_select
ENST00000528622.5	alternative 5' UTR
ENST00000622824.1	MANE_select
ENST00000527066.5	alternative 5' UTR
ENST00000648180.1	CAGE supported TSS
ENST00000648180.1	LR annotation
ENST00000648180.1	MANE_select
ENST00000529629.5	alternative 5' UTR
ENST00000529803.1	MANE_select
ENST00000409709.9	LR annotation
ENST00000409709.9	MANE_select
ENST00000409709.9	non canonical conserved
ENST00000458637.6	non canonical conserved
ENST00000409619.6	non canonical conserved
ENST00000660626.1	CAGE supported TSS
ENST00000670577.1	non canonical U12
ENST00000458169.2	non canonical conserved
ENST00000481328.7	non canonical conserved
ENST00000605744.1	non canonical conserved
ENST00000356341.8	MANE_select
ENST00000529248.5	alternative 5' UTR
ENST00000524847.5	alternative 5' UTR
ENST00000528592.5	alternative 5' UTR
ENST00000528633.1	alternative 5' UTR
ENST00000526968.1	alternative 5' UTR
ENST00000525428.6	MANE_select
ENST00000528364.1	alternative 3' UTR
ENST00000313578.4	MANE_select
ENST00000308488.10	CCDS8253.1
ENST00000467567.1	FLJ40811
ENST00000526415.5	alternative 5' UTR
ENST00000534064.6	MANE_select
ENST00000353172.6	MANE_select
ENST00000281030.2	MANE_select
ENST00000281031.5	MANE_select
ENST00000680761.1	align_id:3557725|asmbl_47890
ENST00000680761.1	alternative 5' UTR
ENST00000525783.6	align_id:3557730|asmbl_47895
ENST00000529139.6	align_id:3557768|asmbl_47933
ENST00000681489.1	align_id:3557771|asmbl_47936
ENST00000681853.1	align_id:3557731|asmbl_47896
ENST00000524925.2	align_id:3557781|asmbl_47946
ENST00000679581.1	align_id:3557777|asmbl_47942
ENST00000680329.1	align_id:3557732|asmbl_47897
ENST00000530910.6	align_id:3557718|asmbl_47883
ENST00000681417.1	align_id:3557733|asmbl_47898
ENST00000681225.1	align_id:3557728|asmbl_47893
ENST00000681765.1	align_id:3557773|asmbl_47938
ENST00000680063.1	align_id:3557742|asmbl_47907
ENST00000679986.1	align_id:3557741|asmbl_47906
ENST00000681699.1	align_id:3557756|asmbl_47921
ENST00000680459.1	align_id:3557743|asmbl_47908
ENST00000679685.1	align_id:3557783|asmbl_47948
ENST00000681384.1	align_id:3557774|asmbl_47939
ENST00000679874.1	align_id:3557782|asmbl_47947
ENST00000679444.1	align_id:3557726|asmbl_47891
ENST00000680142.1	align_id:3557786|asmbl_47951
ENST00000681723.1	align_id:3557722|asmbl_47887
ENST00000680797.1	align_id:3557779|asmbl_47944
ENST00000680256.1	NAGNAG splice site
ENST00000679697.1	align_id:3557778|asmbl_47943
ENST00000680580.1	align_id:3557724|asmbl_47889
ENST00000526849.6	align_id:1296993|asmbl_16896
ENST00000299626.10	MANE_select
ENST00000680467.1	align_id:3557769|asmbl_47934
ENST00000679497.1	align_id:3557719|asmbl_47884
ENST00000681351.1	align_id:3557770|asmbl_47935
ENST00000681575.1	align_id:3557723|asmbl_47888
ENST00000376156.7	NP_001007028
ENST00000680499.1	align_id:3557761|asmbl_47926
ENST00000680829.1	align_id:3557759|asmbl_47924
ENST00000680101.1	align_id:3557767|asmbl_47932
ENST00000679648.1	align_id:3557772|asmbl_47937
ENST00000680996.1	align_id:3557775|asmbl_47940
ENST00000680399.1	align_id:3557776|asmbl_47941
ENST00000680650.1	align_id:1297015|asmbl_16918
ENST00000662186.1	Assembled from SLRseq reads (SRP049776)
ENST00000530261.2	Assembled from SLRseq reads (SRP049776)
ENST00000667996.1	Assembled from SLRseq reads (SRP049776)
ENST00000663331.1	Assembled from SLRseq reads (SRP049776)
ENST00000340067.4	MANE_select
ENST00000526208.5	alternative 5' UTR
ENST00000525447.1	alternative 5' UTR
ENST00000529350.1	alternative 5' UTR
ENST00000530018.5	alternative 5' UTR
ENST00000528776.1	alternative 5' UTR
ENST00000529308.6	MANE_select
ENST00000529308.6	NP_065849
ENST00000361507.5	MANE_select
ENST00000528886.5	alternative 5' UTR
ENST00000530915.1	alternative 5' UTR
ENST00000656562.1	Assembled from SLRseq reads (SRP049776)
ENST00000660634.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664831.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000281038.10	MANE_select
ENST00000529571.1	alternative 5' UTR
ENST00000278550.12	MANE_select
ENST00000527736.5	alternative 5' UTR
ENST00000647625.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000671134.1	Assembled from SLRseq reads (SRP049776)
ENST00000671210.1	Assembled from SLRseq reads (SRP049776)
ENST00000659248.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653173.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667990.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671244.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000530896.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655084.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666803.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662673.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661273.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668951.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668723.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671287.1	Assembled from SLRseq reads (SRP049776)
ENST00000661021.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000527364.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000329203.5	MANE_select
ENST00000526305.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657980.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000313010.8	MANE_select
ENST00000681883.1	CAGE supported TSS
ENST00000680040.1	CAGE supported TSS
ENST00000681432.1	CAGE supported TSS
ENST00000679809.1	CAGE supported TSS
ENST00000680186.1	CAGE supported TSS
ENST00000681592.1	CAGE supported TSS
ENST00000534264.2	CAGE supported TSS
ENST00000534264.2	alternative 5' UTR
ENST00000679387.1	alternative 5' UTR
ENST00000531801.6	alternative 5' UTR
ENST00000393399.6	NP_955450
ENST00000528082.6	upstream ATG
ENST00000534631.5	alternative 5' UTR
ENST00000531128.5	alternative 5' UTR
ENST00000534396.5	alternative 5' UTR
ENST00000533126.1	alternative 5' UTR
ENST00000532277.5	alternative 5' UTR
ENST00000524921.5	alternative 5' UTR
ENST00000532589.5	alternative 5' UTR
ENST00000533655.6	MANE_select
ENST00000528262.5	alternative 5' UTR
ENST00000527633.6	MANE_select
ENST00000527633.6	alternative 5' UTR
ENST00000260056.6	alternative 5' UTR
ENST00000531021.5	alternative 5' UTR
ENST00000534301.5	alternative 5' UTR
ENST00000526205.5	alternative 5' UTR
ENST00000534103.5	alternative 5' UTR
ENST00000533276.6	alternative 5' UTR
ENST00000528379.1	alternative 5' UTR
ENST00000656330.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656330.1	Assembled from SLRseq reads (SRP049776)
ENST00000658004.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658004.1	Assembled from SLRseq reads (SRP049776)
ENST00000669459.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663168.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000501011.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655468.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669058.1	Assembled from SLRseq reads (SRP049776)
ENST00000658917.1	Assembled from SLRseq reads (SRP049776)
ENST00000669005.1	Assembled from SLRseq reads (SRP049776)
ENST00000665456.1	Assembled from SLRseq reads (SRP049776)
ENST00000602381.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665524.1	Assembled from SLRseq reads (SRP049776)
ENST00000624533.1	confirm experimentally
ENST00000533342.6	MANE_select
ENST00000525503.5	alternative 5' UTR
ENST00000671128.1	Assembled from SLRseq reads (SRP049776)
ENST00000376104.7	MANE_select
ENST00000426717.6	NP_001136174
ENST00000648622.1	CAGE supported TSS
ENST00000529399.1	alternative 5' UTR
ENST00000358867.11	MANE_select
ENST00000304511.7	MANE_select
ENST00000527447.2	MANE_select
ENST00000316398.5	MANE_select
ENST00000525702.5	alternative 5' UTR
ENST00000524452.5	confirm experimentally
ENST00000527794.5	alternative 5' UTR
ENST00000529534.5	alternative 5' UTR
ENST00000526999.5	alternative 5' UTR
ENST00000532221.5	alternative 5' UTR
ENST00000524911.5	alternative 5' UTR
ENST00000533577.1	alternative 5' UTR
ENST00000623909.1	CAGE supported TSS
ENST00000342404.8	MANE_select
ENST00000529676.2	not organism-supported
ENST00000393346.8	MANE_select
ENST00000263360.11	MANE_select
ENST00000673233.2	CAGE supported TSS
ENST00000673233.2	confirm experimentally
ENST00000278483.8	MANE_select
ENST00000445632.7	MANE_select
ENST00000624124.1	confirm experimentally
ENST00000543262.5	alternative 5' UTR
ENST00000530335.1	alternative 5' UTR
ENST00000532471.1	alternative 5' UTR
ENST00000526834.1	alternative 5' UTR
ENST00000526944.1	alternative 5' UTR
ENST00000669614.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000527521.1	alternative 5' UTR
ENST00000280258.6	MANE_select
ENST00000531380.2	MANE_select
ENST00000531380.2	upstream ATG
ENST00000499504.8	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662165.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000531827.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000305494.6	MANE_select
ENST00000649399.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000243662.11	MANE_select
ENST00000679224.1	EST evidence: AI800471.1
ENST00000678395.1	DNA evidence: BC008059.1 and BE274561.1
ENST00000227266.10	MANE_select
ENST00000677802.1	EST evidence: BM838080.1 and BG249206.1
ENST00000677661.1	alternative 5' UTR
ENST00000678520.1	alternative 3' UTR
ENST00000679199.1	EST evidence: CB127209.1 and T24650.1
ENST00000524463.6	EST evidence: HY164104.1
ENST00000524463.6	Swiss-Prot isoform: P53634-2.2
ENST00000529974.2	EST evidence: CD517472.1
ENST00000529974.2	Swiss-Prot isoform: P53634-3.2
ENST00000677976.1	EST evidence: BQ878138.1
ENST00000677796.1	alternative 3' UTR
ENST00000654676.1	Assembled from SLRseq reads (SRP049776)
ENST00000449371.6	QC splicing correct
ENST00000263321.6	MANE_select
ENST00000263317.9	MANE_select
ENST00000525540.1	alternative 5' UTR
ENST00000398290.7	MANE_select
ENST00000329758.5	MANE_select
ENST00000526396.3	not best-in-genome evidence
ENST00000533122.3	confirm experimentally
ENST00000448984.1	MANE_select
ENST00000530464.2	MANE_select
ENST00000530464.2	not best-in-genome evidence
ENST00000657257.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000525497.5	alternative 5' UTR
ENST00000534061.6	MANE_select
ENST00000320585.11	MANE_select
ENST00000649150.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000670926.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666286.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000526509.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655162.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661431.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671523.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000577699.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652881.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669697.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000525832.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000525166.6	MANE_select
ENST00000635432.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000257068.3	MANE_select
ENST00000326402.9	MANE_select
ENST00000530053.1	ORF was found but polya features were not found
ENST00000298050.9	MANE_select
ENST00000298050.9	NP_857596.2
ENST00000298050.9	Swiss-Prot : Q05D60.2
ENST00000532819.5	alternative 5' UTR
ENST00000525141.1	alternative 5' UTR
ENST00000527149.1	alternative 5' UTR
ENST00000529714.1	alternative 5' UTR
ENST00000526869.1	alternative 5' UTR
ENST00000325212.11	MANE_select
ENST00000448108.7	MANE_select
ENST00000527690.1	alternative 5' UTR
ENST00000533585.5	alternative 5' UTR
ENST00000528099.5	alternative 5' UTR
ENST00000530620.5	alternative 5' UTR
ENST00000354421.8	MANE_select
ENST00000527003.5	alternative 5' UTR
ENST00000530279.5	alternative 5' UTR
ENST00000527363.5	alternative 5' UTR
ENST00000526335.1	alternative 5' UTR
ENST00000639596.1	alternative 3' UTR
ENST00000251871.9	MANE_select
ENST00000525026.6	alternative 3' UTR
ENST00000639457.1	alternative 3' UTR
ENST00000638790.1	alternative 3' UTR
ENST00000409977.2	MANE_select
ENST00000315765.10	MANE_select
ENST00000227638.8	MANE_select
ENST00000227638.8	suspected genomic sequence error affecting exon 1
ENST00000655054.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657751.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663963.1	Assembled from SLRseq reads (SRP049776)
ENST00000655234.1	Assembled from SLRseq reads (SRP049776)
ENST00000660968.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000243673.7	MANE_select
ENST00000539203.2	(mouse)
ENST00000323929.8	MANE_select
ENST00000323929.8	alternative 5' UTR
ENST00000323977.7	alternative 5' UTR
ENST00000393241.8	NAGNAG splice site
ENST00000393241.8	alternative 5' UTR
ENST00000541157.5	NMD likely if extended
ENST00000536754.5	NAGNAG splice site
ENST00000536754.5	alternative 5' UTR
ENST00000538923.1	(in exon 2)
ENST00000538923.1	NAGNAG splice site
ENST00000538923.1	alternative 5' UTR
ENST00000544612.6	MANE_select
ENST00000302755.4	alternative 5' UTR
ENST00000542198.3	MANE_select
ENST00000542198.3	upstream ATG
ENST00000299001.11	MANE_select
ENST00000648581.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000540151.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000433060.3	MANE_select
ENST00000279839.8	MANE_select
ENST00000335080.6	MANE_select
ENST00000536741.1	alternative 5' UTR
ENST00000450979.2	MANE_select
ENST00000587424.3	MANE_select
ENST00000278505.5	MANE_select
ENST00000534864.6	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000663579.1	Assembled from SLRseq reads (SRP049776)
ENST00000657854.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000534891.6	Assembled from SLRseq reads (SRP049776)
ENST00000665652.1	Assembled from SLRseq reads (SRP049776)
ENST00000670623.1	Assembled from SLRseq reads (SRP049776)
ENST00000543150.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668554.1	Assembled from SLRseq reads (SRP049776)
ENST00000536441.7	MANE_select
ENST00000648353.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000358780.10	MANE_select
ENST00000536839.1	not organism-supported
ENST00000542135.5	alternative 5' UTR
ENST00000537749.1	alternative 5' UTR
ENST00000325542.10	MANE_select
ENST00000541365.5	alternative 5' UTR
ENST00000675896.1	align_id:3559033|asmbl_49198
ENST00000346299.10	MANE_select
ENST00000674610.1	align_id:3558953|asmbl_49118
ENST00000675660.1	align_id:3558961|asmbl_49126
ENST00000675413.1	align_id:3558971|asmbl_49136
ENST00000675933.1	align_id:3558949|asmbl_49114
ENST00000675034.1	align_id:3558965|asmbl_49130
ENST00000676393.1	align_id:3558969|asmbl_49134
ENST00000674901.1	align_id:3558970|asmbl_49135
ENST00000675237.1	align_id:3558967|asmbl_49132
ENST00000674528.1	align_id:3558937|asmbl_49102
ENST00000675477.1	align_id:3558945|asmbl_49110
ENST00000675636.1	CAGE supported TSS
ENST00000675636.1	align_id:3558932|asmbl_49097
ENST00000676378.1	align_id:3558948|asmbl_49113
ENST00000675454.1	align_id:3558938|asmbl_49103
ENST00000675981.1	align_id:3558936|asmbl_49101
ENST00000674924.1	align_id:3558947|asmbl_49112
ENST00000676166.1	align_id:3558934|asmbl_49099
ENST00000676440.1	align_id:3558944|asmbl_49109
ENST00000675957.1	align_id:3558972|asmbl_49137
ENST00000675196.1	align_id:3558943|asmbl_49108
ENST00000676027.1	align_id:3558958|asmbl_49123
ENST00000676432.1	align_id:3558966|asmbl_49131
ENST00000675767.1	align_id:3558973|asmbl_49138
ENST00000675024.1	align_id:3558968|asmbl_49133
ENST00000676272.1	align_id:3558942|asmbl_49107
ENST00000675910.1	align_id:3558950|asmbl_49115
ENST00000393223.8	align_id:3558935|asmbl_49100
ENST00000676177.1	align_id:3558930|asmbl_49095
ENST00000675362.1	align_id:3558946|asmbl_49111
ENST00000674974.1	align_id:3558939|asmbl_49104
ENST00000675320.1	align_id:3558931|asmbl_49096
ENST00000675174.1	align_id:3558952|asmbl_49117
ENST00000674950.1	align_id:3558978|asmbl_49143
ENST00000674989.1	align_id:3558954|asmbl_49119
ENST00000675030.1	align_id:3558959|asmbl_49124
ENST00000676388.1	align_id:3558960|asmbl_49125
ENST00000675848.1	align_id:3558956|asmbl_49121
ENST00000675652.1	align_id:3558951|asmbl_49116
ENST00000676146.1	align_id:3558976|asmbl_49141
ENST00000675922.1	align_id:3558955|asmbl_49120
ENST00000676268.1	align_id:3558975|asmbl_49140
ENST00000675495.1	align_id:3558964|asmbl_49129
ENST00000444541.7	alternative 5' UTR
ENST00000484818.6	upstream ATG
ENST00000524717.6	MANE_select
ENST00000648443.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000646818.2	MANE_select
ENST00000646818.2	alternative 5' UTR
ENST00000645439.1	alternative 5' UTR
ENST00000645439.1	upstream uORF
ENST00000644686.1	alternative 5' UTR
ENST00000646638.1	alternative 5' UTR
ENST00000645366.1	alternative 5' UTR
ENST00000645500.1	alternative 5' UTR
ENST00000423339.2	alternative 5' UTR
ENST00000538597.1	alternative 5' UTR
ENST00000332349.5	MANE_select
ENST00000661755.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000667368.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653025.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667954.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665262.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667244.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000524871.6	MANE_select
ENST00000528682.5	alternative 5' UTR
ENST00000298815.13	MANE_select
ENST00000298815.13	genebuild_only_MANE
ENST00000325455.10	MANE_select
ENST00000344327.8	MANE_select
ENST00000334289.7	MANE_select
ENST00000263468.13	MANE_select
ENST00000434758.7	MANE_select
ENST00000282441.10	MANE_select
ENST00000527309.2	upstream ATG
ENST00000263464.9	CAGE supported TSS
ENST00000263464.9	LR annotation
ENST00000263464.9	MANE_select
ENST00000263464.9	alternative 5' UTR
ENST00000527465.1	alternative 5' UTR
ENST00000398136.7	MANE_select
ENST00000528969.5	alternative 5' UTR
ENST00000531103.5	alternative 5' UTR
ENST00000260227.5	MANE_select
ENST00000260228.3	LR annotation
ENST00000260228.3	MANE_select
ENST00000260229.5	MANE_select
ENST00000236826.8	MANE_select
ENST00000279441.9	MANE_select
ENST00000681445.1	align_id:1297606|asmbl_17509
ENST00000680179.1	align_id:1297607|asmbl_17510
ENST00000315274.7	Interstitial collagenase precursor (EC 3.4.24.7) (M atrix metalloproteinase-1) (MMP-1) (Fibroblast collagenase)
ENST00000315274.7	MANE_select
ENST00000299855.10	MANE_select
ENST00000571244.3	MANE_select
ENST00000260302.8	MANE_select
ENST00000260247.10	MANE_select
ENST00000531543.1	not organism-supported
ENST00000375735.7	LR annotation
ENST00000375735.7	MANE_select
ENST00000650373.1	CAGE supported TSS
ENST00000650373.1	LR annotation
ENST00000393158.7	MANE_select
ENST00000302259.5	MANE_select
ENST00000658775.1	Assembled from SLRseq reads (SRP049776)
ENST00000659889.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000538641.2	Assembled from SLRseq reads (SRP049776)
ENST00000661353.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000661353.1	Assembled from SLRseq reads (SRP049776)
ENST00000653654.1	Assembled from SLRseq reads (SRP049776)
ENST00000670931.1	Assembled from SLRseq reads (SRP049776)
ENST00000668287.1	Assembled from SLRseq reads (SRP049776)
ENST00000659828.1	Assembled from SLRseq reads (SRP049776)
ENST00000670375.1	Assembled from SLRseq reads (SRP049776)
ENST00000669770.1	Assembled from SLRseq reads (SRP049776)
ENST00000653969.1	Assembled from SLRseq reads (SRP049776)
ENST00000655712.1	Assembled from SLRseq reads (SRP049776)
ENST00000658606.1	Assembled from SLRseq reads (SRP049776)
ENST00000662458.1	Assembled from SLRseq reads (SRP049776)
ENST00000667686.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660494.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665834.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666753.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662800.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664290.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653300.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658586.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000545630.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664724.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000417998.5	non canonical polymorphism
ENST00000508062.1	non canonical genome sequence error
ENST00000444739.7	MANE_select
ENST00000417440.2	alternative 5' UTR
ENST00000438448.6	alternative 3' UTR
ENST00000260315.8	MANE_select
ENST00000533400.6	MANE_select
ENST00000533400.6	alternative 3' UTR
ENST00000530950.2	MANE_select
ENST00000649856.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000527177.5	alternative 5' UTR
ENST00000531986.5	alternative 5' UTR
ENST00000282499.10	MANE_select
ENST00000282499.10	genebuild_only_MANE
ENST00000428631.6	alternative 5' UTR
ENST00000649670.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000301919.9	MANE_select
ENST00000530788.1	alternative 5' UTR
ENST00000534458.1	alternative 5' UTR
ENST00000530108.1	alternative 5' UTR
ENST00000531837.2	MANE_select
ENST00000531837.2	alternative 5' UTR
ENST00000532662.1	alternative 5' UTR
ENST00000533423.5	alternative 5' UTR
ENST00000278618.9	MANE_select
ENST00000657948.1	Assembled from SLRseq reads (SRP049776)
ENST00000654142.1	Assembled from SLRseq reads (SRP049776)
ENST00000526355.7	MANE_select
ENST00000282251.9	NM_152434.2
ENST00000428149.7	MANE_select
ENST00000389568.7	alternative 5' UTR
ENST00000265840.12	MANE_select
ENST00000305991.3	MANE_select
ENST00000305991.3	genebuild_only_MANE
ENST00000525934.1	alternative 5' UTR
ENST00000525815.6	MANE_select
ENST00000532513.2	not organism-supported
ENST00000320578.3	MANE_select
ENST00000660738.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000393094.7	MANE_select
ENST00000265838.9	CAGE supported TSS
ENST00000265838.9	LR annotation
ENST00000265838.9	MANE_select
ENST00000649165.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000278612.9	MANE_select
ENST00000610253.5	non canonical TEC
ENST00000675843.1	MANE_select
ENST00000675843.1	alternative 5' UTR
ENST00000532931.5	alternative 5' UTR
ENST00000639953.1	alternative 5' UTR
ENST00000640388.1	alternative 5' UTR
ENST00000639240.1	alternative 5' UTR
ENST00000601453.2	alternative 5' UTR
ENST00000525012.5	NMD likely if extended
ENST00000533526.1	NMD likely if extended
ENST00000419286.2	NMD likely if extended
ENST00000393084.6	MANE_select
ENST00000393084.6	genebuild_only_MANE
ENST00000323468.10	MANE_select
ENST00000265843.9	MANE_select
ENST00000531386.1	alternative 5' UTR
ENST00000648124.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000322536.8	MANE_select
ENST00000615020.1	confirm experimentally
ENST00000327419.7	MANE_select
ENST00000667432.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662064.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000528498.5	alternative 3' UTR
ENST00000645312.1	alternative 3' UTR
ENST00000647231.1	LR annotation
ENST00000645495.2	LR annotation
ENST00000645495.2	MANE_select
ENST00000534683.1	alternative 5' UTR
ENST00000532118.5	alternative 5' UTR
ENST00000663040.1	Assembled from SLRseq reads (SRP049776)
ENST00000278590.8	MANE_select
ENST00000526605.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662858.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661010.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000526703.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655839.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655432.1	Assembled from SLRseq reads (SRP049776)
ENST00000260270.3	MANE_select
ENST00000528829.5	alternative 5' UTR
ENST00000660486.1	Assembled from SLRseq reads (SRP049776)
ENST00000659487.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000280325.6	downstream ATG
ENST00000355430.4	alternative 5' UTR
ENST00000669257.1	Assembled from SLRseq reads (SRP049776)
ENST00000526150.1	alternative 5' UTR
ENST00000528846.5	alternative 5' UTR
ENST00000526216.1	alternative 5' UTR
ENST00000657425.1	Assembled from SLRseq reads (SRP049776)
ENST00000668383.1	Assembled from SLRseq reads (SRP049776)
ENST00000393067.8	MANE_select
ENST00000456861.2	alternative 5' UTR
ENST00000533999.5	alternative 5' UTR
ENST00000375614.7	MANE_select
ENST00000304987.4	MANE_select
ENST00000527614.6	MANE_select
ENST00000532425.6	confirm experimentally
ENST00000616540.5	MANE_select
ENST00000526587.2	not organism-supported
ENST00000260257.9	MANE_select
ENST00000260276.8	MANE_select
ENST00000650687.2	CAGE supported TSS
ENST00000650687.2	MANE_select
ENST00000527950.5	CAGE supported TSS
ENST00000527950.5	alternative 5' UTR
ENST00000616970.5	alternative 5' UTR
ENST00000651650.1	upstream ATG
ENST00000533475.6	alternative 5' UTR
ENST00000527899.6	alternative 5' UTR
ENST00000227251.7	alternative 5' UTR
ENST00000531198.5	alternative 5' UTR
ENST00000529647.5	alternative 5' UTR
ENST00000304298.4	MANE_select
ENST00000529342.5	alternative 5' UTR
ENST00000278601.6	MANE_select
ENST00000440460.7	MANE_select
ENST00000280346.11	MANE_select
ENST00000680411.1	CAGE supported TSS
ENST00000528775.6	NP_001076088.1
ENST00000431456.6	alternative 5' UTR
ENST00000280350.10	MANE_select
ENST00000280350.10	alternative 5' UTR
ENST00000420986.6	alternative 5' UTR
ENST00000393047.8	MANE_select
ENST00000526879.5	alternative 5' UTR
ENST00000525785.5	alternative 5' UTR
ENST00000531378.1	not organism-supported
ENST00000504148.3	MANE_select
ENST00000504148.3	upstream ATG
ENST00000375549.8	CAGE supported TSS
ENST00000375549.8	LR annotation
ENST00000375549.8	MANE_select
ENST00000280357.12	MANE_select
ENST00000528832.1	alternative 5' UTR
ENST00000530752.5	alternative 5' UTR
ENST00000280358.5	MANE_select
ENST00000357685.11	MANE_select
ENST00000531169.5	alternative 3' UTR
ENST00000530677.1	QC splicing correct
ENST00000280362.8	MANE_select
ENST00000338832.4	MANE_select
ENST00000419895.4	Assembled from SLRseq reads (SRP049776)
ENST00000529938.2	Assembled from SLRseq reads (SRP049776)
ENST00000666993.1	Assembled from SLRseq reads (SRP049776)
ENST00000665326.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671165.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671165.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000648201.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000661772.1	Assembled from SLRseq reads (SRP049776)
ENST00000662440.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669768.1	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000532002.2	Assembled from SLRseq reads (SRP049776)
ENST00000654875.1	Assembled from SLRseq reads (SRP049776)
ENST00000649843.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000621128.4	QC splicing correct
ENST00000316851.12	MANE_select
ENST00000662696.1	Assembled from SLRseq reads (SRP049776)
ENST00000533638.2	Assembled from SLRseq reads (SRP049776)
ENST00000661168.1	Assembled from SLRseq reads (SRP049776)
ENST00000526487.6	Assembled from SLRseq reads (SRP049776)
ENST00000529221.6	MANE_select
ENST00000393020.5	QC splicing correct
ENST00000303941.4	MANE_select
ENST00000362072.8	MANE_select
ENST00000542968.5	alternative 5' UTR
ENST00000542616.1	alternative 5' UTR
ENST00000299882.11	LR annotation
ENST00000299882.11	MANE_select
ENST00000539732.5	alternative 5' UTR
ENST00000538770.1	alternative 5' UTR
ENST00000200135.8	MANE_select
ENST00000453129.2	NP_001094859
ENST00000540438.5	NAGNAG splice site
ENST00000545608.5	NAGNAG splice site
ENST00000544750.1	alternative 5' UTR
ENST00000504030.6	upstream ATG
ENST00000335953.9	MANE_select
ENST00000544220.1	alternative 5' UTR
ENST00000535700.1	alternative 5' UTR
ENST00000392996.2	alternative 5' UTR
ENST00000669692.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000299964.4	MANE_select
ENST00000299964.4	alternative 5' UTR
ENST00000541754.1	alternative 5' UTR
ENST00000545255.1	alternative 5' UTR
ENST00000658199.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000623205.2	MANE_select
ENST00000540163.5	NAGNAG splice site
ENST00000541475.5	NAGNAG splice site
ENST00000542140.5	NAGNAG splice site
ENST00000375490.10	MANE_select
ENST00000544582.1	NAGNAG splice site
ENST00000265881.10	MANE_select
ENST00000534921.2	alternative 5' UTR
ENST00000539878.5	alternative 5' UTR
ENST00000375478.4	MANE_select
ENST00000389586.6	MANE_select
ENST00000331581.11	MANE_select
ENST00000661109.1	Assembled from RACEseq reads
ENST00000564619.1	confirm experimentally
ENST00000623333.1	confirm experimentally
ENST00000623807.1	confirm experimentally
ENST00000670874.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666130.1	Assembled from SLRseq reads (SRP049776)
ENST00000654271.1	Assembled from SLRseq reads (SRP049776)
ENST00000657395.1	Assembled from SLRseq reads (SRP049776)
ENST00000653265.1	Assembled from SLRseq reads (SRP049776)
ENST00000653503.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669244.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439483.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665087.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419189.1	not organism-supported
ENST00000260210.5	MANE_select
ENST00000227322.8	MANE_select
ENST00000431973.5	GENCODE experimental pipeline
ENST00000227665.9	CAGE supported TSS
ENST00000227665.9	MANE_select
ENST00000357780.5	MANE_select
ENST00000227667.8	MANE_select
ENST00000375320.5	alternative 5' UTR
ENST00000359492.6	alternative 5' UTR
ENST00000375323.5	alternative 5' UTR
ENST00000236850.5	MANE_select
ENST00000669664.1	Assembled from SLRseq reads (SRP049776)
ENST00000375300.6	KIAA0999
ENST00000527958.6	MANE_select
ENST00000532960.5	alternative 5' UTR
ENST00000324225.9	MANE_select
ENST00000278951.11	NMD exception
ENST00000392951.9	MANE_select
ENST00000525531.5	alternative 5' UTR
ENST00000278968.10	alternative 5' UTR
ENST00000529792.5	alternative 5' UTR
ENST00000533863.1	alternative 5' UTR
ENST00000530649.5	alternative 5' UTR
ENST00000532870.5	alternative 5' UTR
ENST00000320934.8	MANE_select
ENST00000524507.6	alternative 5' UTR
ENST00000676339.1	alternative 5' UTR
ENST00000532301.5	alternative 5' UTR
ENST00000530269.1	alternative 5' UTR
ENST00000534428.5	alternative 5' UTR
ENST00000300650.9	MANE_select
ENST00000300650.9	genebuild_only_MANE
ENST00000530849.1	not organism-supported
ENST00000680971.1	align_id:3560381|asmbl_50546
ENST00000680971.1	alternative 5' UTR
ENST00000679585.1	align_id:3560386|asmbl_50551
ENST00000680271.1	align_id:3560378|asmbl_50543
ENST00000680800.1	align_id:3560379|asmbl_50544
ENST00000392937.10	NP_001193977.1
ENST00000680681.1	align_id:3560390|asmbl_50555
ENST00000510915.6	align_id:3560391|asmbl_50556
ENST00000510630.5	NP_001193978.1
ENST00000649580.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000525734.5	alternative 5' UTR
ENST00000278935.8	MANE_select
ENST00000527609.5	alternative 5' UTR
ENST00000533570.1	alternative 5' UTR
ENST00000651296.2	CAGE supported TSS
ENST00000651296.2	MANE_select
ENST00000292079.7	MANE_select
ENST00000528014.5	alternative 5' UTR
ENST00000260282.8	alternative 5' UTR
ENST00000526014.6	MANE_select
ENST00000526014.6	alternative 5' UTR
ENST00000524656.5	alternative 5' UTR
ENST00000524993.6	MANE_select
ENST00000227752.8	MANE_select
ENST00000636151.1	NMD exception
ENST00000437212.8	MANE_select
ENST00000437212.8	non canonical polymorphism
ENST00000522824.5	non canonical polymorphism
ENST00000324727.9	MANE_select
ENST00000278947.6	CAGE supported TSS
ENST00000278947.6	LR annotation
ENST00000278947.6	MANE_select
ENST00000356289.10	MANE_select
ENST00000525565.1	alternative 5' UTR
ENST00000278949.9	MANE_select
ENST00000278937.7	MANE_select
ENST00000361763.9	MANE_select
ENST00000300692.9	MANE_select
ENST00000532917.3	CAGE supported TSS
ENST00000532917.3	LR annotation
ENST00000532917.3	MANE_select
ENST00000252108.8	MANE_select
ENST00000300688.8	MANE_select
ENST00000534358.8	CAGE supported TSS
ENST00000534358.8	LR annotation
ENST00000534358.8	MANE_select
ENST00000649699.1	confirm experimentally
ENST00000532204.5	alternative 3' UTR
ENST00000420751.3	NMD likely if extended
ENST00000532597.6	Assembled from SLRseq reads (SRP049776)
ENST00000302783.10	MANE_select
ENST00000313236.10	MANE_select
ENST00000524725.5	alternative 5' UTR
ENST00000532749.1	alternative 5' UTR
ENST00000672656.2	CAGE supported TSS
ENST00000264021.8	MANE_select
ENST00000264028.5	MANE_select
ENST00000600882.6	MANE_select
ENST00000600882.6	alternative 5' UTR
ENST00000528594.5	alternative 5' UTR
ENST00000264029.9	MANE_select
ENST00000646572.1	CAGE supported TSS
ENST00000664961.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000534980.7	MANE_select
ENST00000526070.2	alternative 5' UTR
ENST00000292174.5	MANE_select
ENST00000527266.1	NMD likely if extended
ENST00000532899.2	alternative 5' UTR
ENST00000264031.3	MANE_select
ENST00000317011.8	MANE_select
ENST00000334418.6	MANE_select
ENST00000527673.2	MANE_select
ENST00000533632.6	MANE_select
ENST00000525102.5	sequence error
ENST00000526275.5	sequence error
ENST00000532085.1	sequence error
ENST00000650539.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000527992.5	sequence error
ENST00000527992.5	suspected genome sequencing error affecting CDS in exon 4
ENST00000638925.1	sequence error
ENST00000638360.1	sequence error
ENST00000638186.1	sequence error
ENST00000530407.5	sequence error
ENST00000525372.5	sequence error
ENST00000524428.5	sequence error
ENST00000525039.5	sequence error
ENST00000529510.5	sequence error
ENST00000532888.6	sequence error
ENST00000526626.6	sequence error
ENST00000525787.1	sequence error
ENST00000534384.1	sequence error
ENST00000617285.5	MANE_select
ENST00000612687.4	alternative 5' UTR
ENST00000621959.4	alternative 5' UTR
ENST00000530473.5	alternative 5' UTR
ENST00000534233.5	alternative 5' UTR
ENST00000526656.5	alternative 5' UTR
ENST00000532421.5	alternative 5' UTR
ENST00000527038.6	alternative 5' UTR
ENST00000530467.5	alternative 5' UTR
ENST00000610597.1	alternative 5' UTR
ENST00000621676.5	MANE_select
ENST00000621676.5	non canonical U12
ENST00000614944.4	alternative 5' UTR
ENST00000622309.4	non canonical U12
ENST00000534551.2	NMD likely if extended
ENST00000652429.1	LR annotation
ENST00000652429.1	MANE_select
ENST00000536813.6	alternative 5' UTR
ENST00000650101.1	alternative 5' UTR
ENST00000535253.5	alternative 5' UTR
ENST00000392841.1	LR annotation
ENST00000392841.1	alternative 5' UTR
ENST00000648374.1	alternative 5' UTR
ENST00000409993.6	alternative 5' UTR
ENST00000354202.9	MANE_select
ENST00000648610.2	MANE_select
ENST00000648610.2	NAGNAG splice site
ENST00000350777.7	MANE_select
ENST00000619701.5	MANE_select
ENST00000524604.5	alternative 5' UTR
ENST00000615496.4	alternative 5' UTR
ENST00000454811.5	alternative 5' UTR
ENST00000449394.5	alternative 5' UTR
ENST00000422249.5	alternative 5' UTR
ENST00000409109.6	MANE_select
ENST00000409109.6	alternative 5' UTR
ENST00000409991.5	alternative 5' UTR
ENST00000355547.10	MANE_select
ENST00000503566.6	confirm experimentally
ENST00000264033.6	MANE_select
ENST00000264036.6	MANE_select
ENST00000311413.5	MANE_select
ENST00000528368.3	CAGE supported TSS
ENST00000528368.3	MANE_select
ENST00000530681.2	CAGE supported TSS
ENST00000530681.2	alternative 5' UTR
ENST00000634633.1	CAGE supported TSS
ENST00000619721.6	MANE_select
ENST00000619721.6	NMD exception
ENST00000360167.4	SW:Q9BY79-2.1 is supposed to be 461aa
ENST00000260187.7	MANE_select
ENST00000531070.1	alternative 5' UTR
ENST00000668377.1	Assembled from SLRseq reads (SRP049776)
ENST00000659432.1	Assembled from SLRseq reads (SRP049776)
ENST00000668500.1	Assembled from SLRseq reads (SRP049776)
ENST00000669703.1	Assembled from SLRseq reads (SRP049776)
ENST00000498979.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656292.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664208.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656105.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660630.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660630.1	Assembled from SLRseq reads (SRP049776)
ENST00000670603.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000284240.10	MANE_select
ENST00000528522.5	alternative 5' UTR
ENST00000524970.5	alternative 5' UTR
ENST00000524659.1	alternative 5' UTR
ENST00000658767.1	Assembled from SLRseq reads (SRP049776)
ENST00000264025.8	MANE_select
ENST00000658360.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662653.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664971.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000534055.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662076.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667462.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662013.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658666.1	Assembled from SLRseq reads (SRP049776)
ENST00000652852.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000341846.10	MANE_select
ENST00000526881.1	CAGE supported TSS
ENST00000529011.1	alternative 5' UTR
ENST00000529495.1	alternative 5' UTR
ENST00000532833.1	alternative 5' UTR
ENST00000529040.1	alternative 5' UTR
ENST00000530303.5	alternative 5' UTR
ENST00000328965.9	MANE_select
ENST00000260264.8	11:120107335-120107353(+)__11110
ENST00000543440.7	MANE_select
ENST00000375095.3	MANE_select
ENST00000397843.7	MANE_select
ENST00000638419.1	NAGNAG splice site
ENST00000638419.1	alternative 5' UTR
ENST00000527524.8	MANE_select
ENST00000438375.2	alternative 5' UTR
ENST00000533291.5	alternative 5' UTR
ENST00000533291.5	has ORF but no polyA features
ENST00000529397.5	alternative 5' UTR
ENST00000528512.5	alternative 5' UTR
ENST00000524726.1	alternative 5' UTR
ENST00000392793.6	MANE_select
ENST00000264027.9	MANE_select
ENST00000392789.2	alternative 5' UTR
ENST00000260197.12	MANE_select
ENST00000664032.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660311.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667484.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661432.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000665519.1	Assembled from SLRseq reads (SRP049776)
ENST00000653565.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660148.1	Assembled from SLRseq reads (SRP049776)
ENST00000669306.1	Assembled from SLRseq reads (SRP049776)
ENST00000657554.1	Assembled from SLRseq reads (SRP049776)
ENST00000655232.1	Assembled from SLRseq reads (SRP049776)
ENST00000531470.3	Assembled from SLRseq reads (SRP049776)
ENST00000670198.1	Assembled from SLRseq reads (SRP049776)
ENST00000666485.1	Assembled from SLRseq reads (SRP049776)
ENST00000656226.1	Assembled from SLRseq reads (SRP049776)
ENST00000656682.1	Assembled from SLRseq reads (SRP049776)
ENST00000659296.1	Assembled from SLRseq reads (SRP049776)
ENST00000530072.6	Assembled from SLRseq reads (SRP049776)
ENST00000654519.1	Assembled from SLRseq reads (SRP049776)
ENST00000532890.6	Assembled from SLRseq reads (SRP049776)
ENST00000528986.2	Assembled from SLRseq reads (SRP049776)
ENST00000531071.6	Assembled from SLRseq reads (SRP049776)
ENST00000665673.1	Assembled from SLRseq reads (SRP049776)
ENST00000662950.1	Assembled from SLRseq reads (SRP049776)
ENST00000664908.1	Assembled from SLRseq reads (SRP049776)
ENST00000670396.1	Assembled from SLRseq reads (SRP049776)
ENST00000656793.1	Assembled from SLRseq reads (SRP049776)
ENST00000663296.1	Assembled from SLRseq reads (SRP049776)
ENST00000661848.1	Assembled from SLRseq reads (SRP049776)
ENST00000655138.1	Assembled from SLRseq reads (SRP049776)
ENST00000653167.1	Assembled from SLRseq reads (SRP049776)
ENST00000658364.1	Assembled from SLRseq reads (SRP049776)
ENST00000669472.1	Assembled from SLRseq reads (SRP049776)
ENST00000660603.1	Assembled from SLRseq reads (SRP049776)
ENST00000668776.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668776.1	Assembled from SLRseq reads (SRP049776)
ENST00000655814.1	Assembled from SLRseq reads (SRP049776)
ENST00000654629.1	Assembled from SLRseq reads (SRP049776)
ENST00000666085.1	Assembled from SLRseq reads (SRP049776)
ENST00000534782.4	Assembled from SLRseq reads (SRP049776)
ENST00000532350.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000532350.6	Assembled from SLRseq reads (SRP049776)
ENST00000657990.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658183.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670951.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665305.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654571.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660329.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656387.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661695.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670843.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658452.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659378.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670520.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655288.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666347.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663802.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665051.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656868.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670374.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669993.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000560104.2	MANE_select
ENST00000284273.6	MANE_select
ENST00000665104.1	Assembled from SLRseq reads (SRP049776)
ENST00000649590.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000227348.9	MANE_select
ENST00000227349.7	MANE_select
ENST00000227349.7	alternative 5' UTR
ENST00000343035.3	MANE_select
ENST00000532636.5	alternative 5' UTR
ENST00000534624.6	MANE_select
ENST00000227378.7	alternative 5' UTR
ENST00000227378.7	chimeric clone used as the evidence
ENST00000533238.5	has ORF
ENST00000527983.5	has ORF
ENST00000532780.5	has ORF
ENST00000532167.5	has ORF
ENST00000525624.5	alternative 5' UTR
ENST00000527387.5	alternative 5' UTR
ENST00000524590.5	alternative 5' UTR
ENST00000531063.1	has ORF
ENST00000660892.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000448775.4	MANE_select
ENST00000531681.2	Assembled from SLRseq reads (SRP049776)
ENST00000657363.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664077.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657507.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000633646.1	alternative 5' UTR
ENST00000638086.1	upstream ATG
ENST00000632815.1	CAGE supported TSS
ENST00000632815.1	alternative 5' UTR
ENST00000646146.1	CAGE supported TSS
ENST00000299333.8	CAGE supported TSS
ENST00000299333.8	MANE_select
ENST00000299333.8	alternative 5' UTR
ENST00000657191.1	alternative 5' UTR
ENST00000532961.2	Assembled from SLRseq reads (SRP049776)
ENST00000530393.6	MANE_select
ENST00000530393.6	alternative 5' UTR
ENST00000529691.1	alternative 5' UTR
ENST00000528306.5	alternative 5' UTR
ENST00000526252.5	alternative 5' UTR
ENST00000641780.1	ENA ID EGAS00001001486
ENST00000375026.7	MANE_select
ENST00000641687.1	ENA ID EGAS00001001486
ENST00000641687.1	MANE_select
ENST00000641687.1	NCBI GEO ID GSE80249
ENST00000641687.1	alternative 5' UTR
ENST00000307002.3	MANE_select
ENST00000641521.1	ENA ID EGAS00001001486
ENST00000641521.1	alternative 5' UTR
ENST00000641722.1	ENA ID EGAS00001001486
ENST00000641722.1	MANE_select
ENST00000375024.1	MANE_select
ENST00000641224.2	ENA ID EGAS00001001486
ENST00000641224.2	MANE_select
ENST00000641224.2	alternative 5' UTR
ENST00000641585.1	ENA ID EGAS00001001486
ENST00000641585.1	MANE_select
ENST00000641519.1	ENA ID EGAS00001001486
ENST00000641736.1	ENA ID EGAS00001001486
ENST00000456829.7	MANE_select
ENST00000641351.2	ENA ID EGAS00001001486
ENST00000641351.2	alternative 5' UTR
ENST00000641546.1	ENA ID EGAS00001001486
ENST00000641546.1	alternative 5' UTR
ENST00000641572.1	ENA ID EGAS00001001486
ENST00000641848.1	ENA ID EGAS00001001486
ENST00000641848.1	alternative 5' UTR
ENST00000641972.1	ENA ID EGAS00001001486
ENST00000641992.1	ENA ID EGAS00001001486
ENST00000641992.1	alternative 5' UTR
ENST00000641015.1	ENA ID EGAS00001001486
ENST00000641015.1	MANE_select
ENST00000641015.1	alternative 5' UTR
ENST00000641897.1	ENA ID EGAS00001001486
ENST00000641897.1	alternative 5' UTR
ENST00000624618.1	LOF variant in other haplotypes
ENST00000641132.1	NCBI GEO ID GSE80249
ENST00000641451.2	ENA ID EGAS00001001486
ENST00000641451.2	MANE_select
ENST00000641139.1	ENA ID EGAS00001001486
ENST00000641139.1	MANE_select
ENST00000647864.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000642064.1	ENA ID EGAS00001001486
ENST00000642064.1	MANE_select
ENST00000642064.1	alternative 5' UTR
ENST00000642028.1	ENA ID EGAS00001001486
ENST00000641958.1	ENA ID EGAS00001001486
ENST00000641670.1	ENA ID EGAS00001001486
ENST00000641670.1	alternative 5' UTR
ENST00000284287.6	MANE_select
ENST00000284288.3	MANE_select
ENST00000441174.8	MANE_select
ENST00000441174.8	NP_116200.2
ENST00000452080.5	NMD likely if extended
ENST00000263593.8	MANE_select
ENST00000227135.7	MANE_select
ENST00000227135.7	alternative 5' UTR
ENST00000284292.11	MANE_select
ENST00000412681.2	alternative 3' UTR
ENST00000326621.10	MANE_select
ENST00000278927.10	MANE_select
ENST00000653370.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000374979.8	MANE_select
ENST00000239614.8	CAGE supported TSS
ENST00000650095.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000634413.1	NMD likely if extended
ENST00000653593.1	Assembled from SLRseq reads (SRP049776)
ENST00000656769.1	Assembled from SLRseq reads (SRP049776)
ENST00000653170.1	Assembled from SLRseq reads (SRP049776)
ENST00000664095.1	Assembled from SLRseq reads (SRP049776)
ENST00000667918.1	Assembled from SLRseq reads (SRP049776)
ENST00000665706.1	Assembled from SLRseq reads (SRP049776)
ENST00000661455.1	Assembled from SLRseq reads (SRP049776)
ENST00000657666.1	Assembled from SLRseq reads (SRP049776)
ENST00000666874.1	Assembled from SLRseq reads (SRP049776)
ENST00000658998.1	Assembled from SLRseq reads (SRP049776)
ENST00000655101.1	Assembled from SLRseq reads (SRP049776)
ENST00000662980.1	Assembled from SLRseq reads (SRP049776)
ENST00000666933.1	Assembled from SLRseq reads (SRP049776)
ENST00000657884.1	Assembled from SLRseq reads (SRP049776)
ENST00000397801.6	MANE_select
ENST00000306534.8	MANE_select
ENST00000298251.5	MANE_select
ENST00000655771.1	Assembled from SLRseq reads (SRP049776)
ENST00000667169.1	Assembled from SLRseq reads (SRP049776)
ENST00000649496.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000344762.6	MANE_select
ENST00000403796.7	MANE_select
ENST00000532407.5	alternative 5' UTR
ENST00000279968.8	alternative 5' UTR
ENST00000526175.5	alternative 5' UTR
ENST00000527271.5	alternative 5' UTR
ENST00000559662.5	NMD likely if extended
ENST00000557814.5	NMD likely if extended
ENST00000527238.5	alternative 5' UTR
ENST00000531212.5	alternative 5' UTR
ENST00000558729.5	NMD likely if extended
ENST00000558729.5	alternative 5' UTR
ENST00000558705.1	alternative 5' UTR
ENST00000278919.8	MANE_select
ENST00000648911.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000366139.3	alternative 5' UTR
ENST00000527534.1	alternative 5' UTR
ENST00000529812.5	alternative 5' UTR
ENST00000524723.5	alternative 5' UTR
ENST00000620753.4	alternative 5' UTR
ENST00000527842.6	alternative 5' UTR
ENST00000278903.11	MANE_select
ENST00000527520.6	alternative 5' UTR
ENST00000527131.2	alternative 5' UTR
ENST00000527606.5	alternative 5' UTR
ENST00000529196.5	alternative 5' UTR
ENST00000392708.9	MANE_select
ENST00000649491.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000525652.5	alternative 5' UTR
ENST00000525396.5	alternative 5' UTR
ENST00000427383.6	CAGE supported TSS
ENST00000427383.6	overlapping uORF
ENST00000428830.6	CAGE supported TSS
ENST00000428830.6	alternative 3' UTR
ENST00000428830.6	alternative 5' UTR
ENST00000438015.6	CAGE supported TSS
ENST00000438015.6	LR annotation
ENST00000544373.5	CAGE supported TSS
ENST00000527013.6	CAGE supported TSS
ENST00000526937.5	CAGE supported TSS
ENST00000534685.5	CAGE supported TSS
ENST00000534685.5	alternative 5' UTR
ENST00000532449.6	alternative 5' UTR
ENST00000533904.6	MANE_select
ENST00000305738.10	MANE_select
ENST00000358524.8	MANE_select
ENST00000445202.2	MANE_select
ENST00000457514.3	MANE_select
ENST00000425380.7	MANE_select
ENST00000425380.7	alternative 5' UTR
ENST00000526028.1	alternative 5' UTR
ENST00000227474.8	MANE_select
ENST00000227474.8	genebuild_only_MANE
ENST00000534158.5	alternative 5' UTR
ENST00000529801.1	alternative 5' UTR
ENST00000263576.11	MANE_select
ENST00000526875.1	not organism-supported
ENST00000531738.6	CAGE supported TSS
ENST00000531738.6	MANE_select
ENST00000531738.6	alternative 5' UTR
ENST00000534818.1	alternative 5' UTR
ENST00000659151.1	Assembled from SLRseq reads (SRP049776)
ENST00000298317.9	MANE_select
ENST00000528985.5	upstream_ATG-4
ENST00000530043.5	alternative 5' UTR
ENST00000533050.6	MANE_select
ENST00000332118.11	MANE_select
ENST00000263578.10	MANE_select
ENST00000392679.6	MANE_select
ENST00000392680.6	alternative 5' UTR
ENST00000263579.5	MANE_select
ENST00000648516.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000648516.1	CAGE supported TSS
ENST00000676545.1	align_id:3561957|asmbl_52122
ENST00000676867.1	align_id:3561934|asmbl_52099
ENST00000678865.1	align_id:3561940|asmbl_52105
ENST00000444328.7	MANE_select
ENST00000677503.1	align_id:3561961|asmbl_52126
ENST00000677721.1	long_read_pipeline_2
ENST00000526311.5	alternative 5' UTR
ENST00000528858.5	alternative 5' UTR
ENST00000534452.5	alternative 5' UTR
ENST00000392669.6	alternative 5' UTR
ENST00000526727.5	alternative 5' UTR
ENST00000525144.7	MANE_select
ENST00000532988.1	CAGE supported TSS
ENST00000654691.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665827.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665385.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671008.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666795.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663235.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671272.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654648.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654637.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654157.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666557.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666590.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656864.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667649.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655623.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654651.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656048.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668017.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667463.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664558.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670481.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658423.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658423.1	Assembled from SLRseq reads (SRP049776)
ENST00000527317.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657763.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655277.1	Assembled from RACEseq reads
ENST00000608214.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608214.2	CAGE supported TSS
ENST00000670942.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654938.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664091.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671140.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665260.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649115.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000650607.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000609260.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667926.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000392668.8	MANE_select
ENST00000526145.6	pig
ENST00000527767.7	alternative 5' UTR
ENST00000527786.7	MANE_select
ENST00000534087.3	alternative 5' UTR
ENST00000392665.6	alternative 5' UTR
ENST00000392666.6	MANE_select
ENST00000392666.6	alternative 5' UTR
ENST00000529694.6	MANE_select
ENST00000338350.4	alternative 5' UTR
ENST00000533599.1	alternative 5' UTR
ENST00000524878.1	alternative 5' UTR
ENST00000531399.6	MANE_select
ENST00000281437.6	MANE_select
ENST00000656097.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000281441.8	MANE_select
ENST00000524567.1	alternative 5' UTR
ENST00000524746.5	alternative 5' UTR
ENST00000531755.5	alternative 5' UTR
ENST00000532225.5	alternative 5' UTR
ENST00000526884.1	alternative 5' UTR
ENST00000531318.1	alternative 5' UTR
ENST00000360871.8	MANE_select
ENST00000650012.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000650012.1	alternative 5' UTR
ENST00000338167.10	MANE_select
ENST00000278742.6	MANE_select
ENST00000357899.9	MANE_select
ENST00000649867.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000257359.7	MANE_select
ENST00000653403.1	Assembled from SLRseq reads (SRP049776)
ENST00000265909.9	MANE_select
ENST00000530356.5	alternative 5' UTR
ENST00000443319.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658604.1	Assembled from SLRseq reads (SRP049776)
ENST00000648604.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000663555.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000663344.1	Assembled from SLRseq reads (SRP049776)
ENST00000299140.8	MANE_select
ENST00000532889.1	alternative 3' UTR
ENST00000533871.8	MANE_select
ENST00000661634.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664263.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647888.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000660021.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667347.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000532706.2	Assembled from SLRseq reads (SRP049776)
ENST00000533922.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000533922.6	Assembled from SLRseq reads (SRP049776)
ENST00000662879.1	Assembled from SLRseq reads (SRP049776)
ENST00000662392.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000655895.1	Assembled from SLRseq reads (SRP049776)
ENST00000299106.9	MANE_select
ENST00000534548.7	MANE_select
ENST00000525485.5	alternative 5' UTR
ENST00000534227.5	alternative 5' UTR
ENST00000281187.10	MANE_select
ENST00000392595.6	alternative 5' UTR
ENST00000392594.7	alternative 5' UTR
ENST00000341541.8	MANE_select
ENST00000281182.9	MANE_select
ENST00000431683.7	MANE_select
ENST00000486034.5	QC splicing correct
ENST00000455971.6	QC splicing correct
ENST00000535456.7	MANE_select
ENST00000312527.9	MANE_select
ENST00000524765.1	alternative 3' UTR
ENST00000524765.1	alternative 5' UTR
ENST00000657630.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661684.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000531319.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000533390.6	Assembled from SLRseq reads (SRP049776)
ENST00000653028.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663285.1	Assembled from SLRseq reads (SRP049776)
ENST00000650618.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000670056.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656029.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653881.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663685.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658317.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650337.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000652919.1	Assembled from SLRseq reads (SRP049776)
ENST00000657926.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000538872.6	MANE_select
ENST00000359674.8	corf
ENST00000424061.6	alternative 5' UTR
ENST00000536824.5	alternative 5' UTR
ENST00000537793.1	alternative 5' UTR
ENST00000343164.9	MANE_select
ENST00000399788.7	MANE_select
ENST00000540180.5	alternative 5' UTR
ENST00000535052.5	alternative 5' UTR
ENST00000543504.5	alternative 5' UTR
ENST00000412006.6	NP_001123618
ENST00000239830.9	MANE_select
ENST00000266383.10	MANE_select
ENST00000647602.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000305108.9	corf
ENST00000666212.1	Assembled from SLRseq reads (SRP049776)
ENST00000543884.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655409.1	Assembled from SLRseq reads (SRP049776)
ENST00000670735.1	Assembled from SLRseq reads (SRP049776)
ENST00000662519.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000315939.11	MANE_select
ENST00000315939.11	corf
ENST00000675631.1	CAGE supported TSS
ENST00000574679.1	not organism-supported
ENST00000648642.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000358495.8	MANE_select
ENST00000358495.8	corf
ENST00000430095.6	alternative 5' UTR
ENST00000545318.2	alternative 5' UTR
ENST00000360905.9	MANE_select
ENST00000589132.1	alternative 5' UTR
ENST00000513082.2	QC splicing correct
ENST00000537031.5	alternative 5' UTR
ENST00000310594.7	alternative 5' UTR
ENST00000397196.7	MANE_select
ENST00000397196.7	corf
ENST00000339235.4	MANE_select
ENST00000357103.5	MANE_select
ENST00000650086.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000537784.5	non canonical U12
ENST00000382722.10	MANE_select
ENST00000382722.10	non canonical U12
ENST00000280663.12	QC splicing correct
ENST00000280663.12	non canonical U12
ENST00000444595.6	non canonical U12
ENST00000545595.6	non canonical U12
ENST00000538450.5	non canonical U12
ENST00000587995.5	non canonical U12
ENST00000585385.5	non canonical U12
ENST00000541444.5	non canonical U12
ENST00000588077.5	PMID 12181424, Qin N. et al. (2002) Mol. Pharmacol. 62:485-496
ENST00000588077.5	confirm experimentally
ENST00000588077.5	non canonical U12
ENST00000538027.6	non canonical U12
ENST00000536846.6	non canonical U12
ENST00000543405.1	non canonical U12
ENST00000586184.5	PMID 12181424, Qin N. et al. (2002) Mol. Pharmacol. 62:485-496
ENST00000586184.5	confirm experimentally
ENST00000586184.5	non canonical U12
ENST00000588896.1	non canonical U12
ENST00000585708.5	PMID 12181424, Qin N. et al. (2002) Mol. Pharmacol. 62:485-496
ENST00000585708.5	confirm experimentally
ENST00000585708.5	non canonical U12
ENST00000537923.5	alternative 3' UTR
ENST00000539048.2	NMD likely if extended
ENST00000668721.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000299194.6	MANE_select
ENST00000280665.11	MANE_select
ENST00000541700.5	QC splicing correct
ENST00000399655.6	CAGE supported TSS
ENST00000399655.6	LR annotation
ENST00000399655.6	MANE_select
ENST00000399655.6	non canonical conserved
ENST00000399641.6	CAGE supported TSS
ENST00000399641.6	LR annotation
ENST00000399641.6	non canonical conserved
ENST00000399603.6	CAGE supported TSS
ENST00000399603.6	LR annotation
ENST00000399603.6	non canonical conserved
ENST00000347598.9	CAGE supported TSS
ENST00000347598.9	LR annotation
ENST00000347598.9	non canonical conserved
ENST00000327702.12	CAGE supported TSS
ENST00000327702.12	LR annotation
ENST00000327702.12	non canonical conserved
ENST00000335762.9	non canonical conserved
ENST00000480911.6	non canonical conserved
ENST00000399595.5	non canonical conserved
ENST00000399644.5	non canonical conserved
ENST00000399638.5	non canonical conserved
ENST00000399597.5	non canonical conserved
ENST00000399621.5	non canonical conserved
ENST00000399637.5	non canonical conserved
ENST00000399591.5	non canonical conserved
ENST00000399606.5	non canonical conserved
ENST00000399601.5	non canonical conserved
ENST00000344100.7	non canonical conserved
ENST00000399629.5	non canonical conserved
ENST00000399649.5	non canonical conserved
ENST00000402845.7	non canonical conserved
ENST00000399634.5	non canonical conserved
ENST00000399617.5	non canonical conserved
ENST00000406454.7	non canonical conserved
ENST00000491104.1	NMD likely if extended
ENST00000491104.1	QC splicing correct
ENST00000669813.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648763.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000649808.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000543559.1	QC splicing correct
ENST00000613818.2	Assembled from SLRseq reads (SRP049776)
ENST00000670289.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000001008.6	MANE_select
ENST00000001008.6	corf
ENST00000543769.1	non canonical TEC
ENST00000540260.1	non canonical TEC
ENST00000538622.1	QC splicing correct
ENST00000228799.7	MANE_select
ENST00000228799.7	corf
ENST00000337508.9	MANE_select
ENST00000637658.2	LOC101929469
ENST00000637658.2	MANE_select
ENST00000359843.8	MANE_select
ENST00000535350.1	NAGNAG splice site
ENST00000538636.5	alternative 5' UTR
ENST00000366285.5	alternative 5' UTR
ENST00000538700.2	alternative 5' UTR
ENST00000489288.7	MANE_select
ENST00000448120.7	MANE_select
ENST00000359864.8	MANE_select
ENST00000540314.2	alternative 5' UTR
ENST00000536826.2	alternative 5' UTR
ENST00000543035.6	alternative 5' UTR
ENST00000011898.10	MANE_select
ENST00000649909.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000662026.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000382622.4	MANE_select
ENST00000656838.1	Assembled from SLRseq reads (SRP049776)
ENST00000668740.1	Assembled from SLRseq reads (SRP049776)
ENST00000333750.9	NAGNAG splice site
ENST00000440314.7	MANE_select
ENST00000624384.1	confirm experimentally
ENST00000637958.1	CAGE supported TSS
ENST00000427057.6	alternative 5' UTR
ENST00000228820.9	MANE_select
ENST00000228820.9	NP_065100.2
ENST00000453942.2	NAGNAG splice site
ENST00000450737.2	alternative 5' UTR
ENST00000663241.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649371.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000654573.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668261.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669712.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654858.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656828.1	Assembled from SLRseq reads (SRP049776)
ENST00000663068.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000676411.1	CAGE supported TSS
ENST00000676279.1	12:4273254:4274000:1:canonical
ENST00000676279.1	RNASEQT00000094221
ENST00000676279.1	upstream ATG
ENST00000536537.2	QC splicing correct
ENST00000261254.8	MANE_select
ENST00000675468.1	PB.1893.4|chr12:4275115-4305349(+)|i8HQ_Alz|c14537/f3p45/6193
ENST00000675468.1	PacBio_Alzheimer_Brain
ENST00000674624.1	align_id:3562949|asmbl_53114
ENST00000179259.6	MANE_select
ENST00000649073.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000237837.2	MANE_select
ENST00000648269.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000261250.8	MANE_select
ENST00000545746.5	alternative 5' UTR
ENST00000352618.9	MANE_select
ENST00000545571.5	NAGNAG splice site
ENST00000228850.6	MANE_select
ENST00000228850.6	genebuild_only_MANE
ENST00000540967.5	alternative 5' UTR
ENST00000536414.3	alternative 5' UTR
ENST00000544636.1	QC splicing correct
ENST00000266544.10	MANE_select
ENST00000252318.7	MANE_select
ENST00000648865.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000664363.1	Assembled from SLRseq reads (SRP049776)
ENST00000662877.1	Assembled from SLRseq reads (SRP049776)
ENST00000658418.1	Assembled from SLRseq reads (SRP049776)
ENST00000668182.1	Assembled from SLRseq reads (SRP049776)
ENST00000640128.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000639700.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000639114.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000382545.5	CAGE supported TSS
ENST00000382545.5	LR annotation
ENST00000382545.5	MANE_select
ENST00000252321.5	MANE_select
ENST00000648143.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000669681.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654905.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669073.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652862.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000544717.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663953.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663953.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000664597.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655694.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000540237.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662631.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671564.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654414.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660094.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000537714.1	QC splicing correct
ENST00000538430.1	QC splicing correct
ENST00000423158.4	MANE_select
ENST00000356134.9	QC splicing correct
ENST00000261405.10	MANE_select
ENST00000538635.5	QC splicing correct
ENST00000540192.1	QC splicing correct
ENST00000382518.6	CD9 antigen (27 kDa diphtheria toxin receptor-associated protein) (DRAP27)
ENST00000382518.6	alternative 5' UTR
ENST00000642746.1	alternative 5' UTR
ENST00000538834.6	alternative 5' UTR
ENST00000610354.5	pacbio_capture_seq_compmerge_hsAll
ENST00000009180.10	CAGE supported TSS
ENST00000009180.10	LR annotation
ENST00000009180.10	MANE_select
ENST00000382515.7	CD9 antigen (27 kDa diphtheria toxin receptor-associated protein) (DRAP27)
ENST00000646407.1	alternative 5' UTR
ENST00000162749.7	MANE_select
ENST00000543995.5	QC splicing correct
ENST00000543048.5	QC splicing correct
ENST00000228916.7	MANE_select
ENST00000396966.6	QC splicing correct
ENST00000366131.6	QC splicing correct
ENST00000228918.9	MANE_select
ENST00000663143.1	Assembled from RACEseq reads
ENST00000541888.2	QC splicing correct
ENST00000669354.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659820.1	Assembled from SLRseq reads (SRP049776)
ENST00000655473.1	Assembled from SLRseq reads (SRP049776)
ENST00000670713.1	Assembled from SLRseq reads (SRP049776)
ENST00000537003.2	Assembled from SLRseq reads (SRP049776)
ENST00000653829.1	Assembled from SLRseq reads (SRP049776)
ENST00000667738.1	Assembled from SLRseq reads (SRP049776)
ENST00000659623.1	Assembled from SLRseq reads (SRP049776)
ENST00000266557.4	MANE_select
ENST00000266556.8	MANE_select
ENST00000361716.8	CAGE supported TSS
ENST00000396308.4	CAGE supported TSS
ENST00000396308.4	MANE_select
ENST00000229238.5	MANE_select
ENST00000537701.5	alternative 5' UTR
ENST00000543164.5	alternative 5' UTR
ENST00000543703.1	overlapping uORF
ENST00000543959.5	alternative 5' UTR
ENST00000540949.1	alternative 5' UTR
ENST00000541399.1	QC splicing correct
ENST00000315579.10	MANE_select
ENST00000229239.10	MANE_select
ENST00000619571.5	CAGE supported TSS
ENST00000619571.5	MANE_select
ENST00000356896.8	NAGNAG splice site
ENST00000356896.8	NP_001032759
ENST00000537442.5	alternative 5' UTR
ENST00000537442.5	non canonical U12
ENST00000382421.7	non canonical U12
ENST00000545200.5	non canonical U12
ENST00000399466.6	alternative 5' UTR
ENST00000399466.6	non canonical U12
ENST00000322166.10	MANE_select
ENST00000322166.10	non canonical U12
ENST00000541778.5	non canonical U12
ENST00000542944.5	non canonical U12
ENST00000542867.5	non canonical U12
ENST00000644480.2	non canonical U12
ENST00000646322.1	non canonical U12
ENST00000544040.7	MANE_select
ENST00000645022.1	NP_001284482.1
ENST00000643815.1	NAGNAG splice site
ENST00000643335.1	NAGNAG splice site
ENST00000646462.1	NAGNAG splice site
ENST00000645095.1	confirm experimentally
ENST00000647483.1	NAGNAG splice site
ENST00000646608.1	NAGNAG splice site
ENST00000646070.1	NMD likely if extended
ENST00000545942.6	alternative 5' UTR
ENST00000545584.2	alternative 5' UTR
ENST00000644132.1	alternative 5' UTR
ENST00000645265.1	CAGE supported TSS
ENST00000645265.1	confirm experimentally
ENST00000647426.1	CAGE supported TSS
ENST00000647426.1	confirm experimentally
ENST00000646787.1	CAGE supported TSS
ENST00000646787.1	confirm experimentally
ENST00000329858.9	MANE_select
ENST00000540335.1	QC splicing correct
ENST00000229243.7	MANE_select
ENST00000341550.9	MANE_select
ENST00000444704.5	NP_001121057.1
ENST00000467678.5	QC splicing correct
ENST00000417772.7	QC splicing correct
ENST00000534837.6	MANE_select
ENST00000540656.5	alternative 5' UTR
ENST00000543155.6	MANE_select
ENST00000229251.7	alternative 5' UTR
ENST00000539735.5	alternative 5' UTR
ENST00000534947.5	alternative 5' UTR
ENST00000534877.5	alternative 5' UTR
ENST00000543537.5	downstream ATG
ENST00000203630.10	CAGE supported TSS
ENST00000203630.10	MANE_select
ENST00000435120.5	align_id:3563413|asmbl_53578
ENST00000539187.5	alternative 5' UTR
ENST00000309083.8	MANE_select
ENST00000203629.3	MANE_select
ENST00000011653.9	MANE_select
ENST00000311268.8	MANE_select
ENST00000290510.10	MANE_select
ENST00000544813.5	QC splicing correct
ENST00000675241.1	alternative 5' UTR
ENST00000229264.8	CAGE supported TSS
ENST00000229264.8	MANE_select
ENST00000537035.1	QC splicing correct
ENST00000538862.7	MANE_select
ENST00000229268.13	MANE_select
ENST00000396705.10	CAGE supported TSS
ENST00000396705.10	LR annotation
ENST00000396705.10	MANE_select
ENST00000523102.5	alternative 5' UTR
ENST00000524270.6	MANE_select
ENST00000432205.5	alternative 5' UTR
ENST00000443597.7	MANE_select
ENST00000443597.7	alternative 5' UTR
ENST00000415834.5	alternative 5' UTR
ENST00000541477.5	alternative 5' UTR
ENST00000229277.6	MANE_select
ENST00000229277.6	genebuild_only_MANE
ENST00000545045.6	QC splicing correct
ENST00000396684.3	MANE_select
ENST00000396684.3	alternative 5' UTR
ENST00000229281.6	MANE_select
ENST00000318974.14	MANE_select
ENST00000537269.1	CAGE supported TSS
ENST00000535923.6	MANE_select
ENST00000677354.1	compmerge.9603.pooled.chr12
ENST00000399433.7	CHS.10830.2
ENST00000676496.1	CHS.10830.3
ENST00000545555.2	QC splicing correct
ENST00000678983.1	long_read_pipeline_2
ENST00000676893.1	long_read_pipeline_2
ENST00000536316.3	CHS.10830.14
ENST00000544134.5	NMD likely if extended
ENST00000599672.6	MANE_select
ENST00000261407.9	MANE_select
ENST00000328916.7	alternative 5' UTR
ENST00000360817.10	MANE_select
ENST00000360817.10	alternative 5' UTR
ENST00000423384.5	alternative 5' UTR
ENST00000413211.5	alternative 5' UTR
ENST00000403949.5	alternative 5' UTR
ENST00000602480.1	gene fragments AC154092.1-004, up to AC154092.4-005 are part of the same gene; an assembly gap between them contains one or more exons
ENST00000602286.1	gene fragments AC154092.1-003 and  AC154092.4-001 are part of the same gene; an assembly gap between them contains one or more exons
ENST00000602298.1	gene fragments AC154092.2-001 and AC154092.4-003 are part of the same gene; an assembly gap between them contains one or more exons
ENST00000536053.2	gene fragments AC154092.1-004, up to AC154092.4-005 are part of the same gene; an assembly gap between them contains one or more exons
ENST00000540394.2	gene fragments AC154092.1-002 and AC154092.4-002 are part of the same gene; an assembly gap between them contains one or more exons
ENST00000535233.2	gene fragments AC154092.1-003 and  AC154092.4-001 are part of the same gene; an assembly gap between them contains one or more exons
ENST00000542220.2	gene fragments AC154092.1-001 and AC154092.4-004 are part of the same gene; an assembly gap between them contains one or more exons
ENST00000543362.1	gene fragments AC154092.1-001, up to AC154092.1-014 are part of the same gene; an assembly gap between them contains one or more exons
ENST00000543835.1	gene fragments AC154092.1-001, up to AC154092.1-014 are part of the same gene; an assembly gap between them contains one or more exons
ENST00000541042.1	alternative 5' UTR
ENST00000541042.1	gene fragments AC154092.1-001, up to AC154092.1-014 are part of the same gene; an assembly gap between them contains one or more exons
ENST00000543851.1	gene fragments AC154092.1-001, up to AC154092.1-014 are part of the same gene; an assembly gap between them contains one or more exons
ENST00000540242.1	gene fragments AC154092.1-001, up to AC154092.1-014 are part of the same gene; an assembly gap between them contains one or more exons
ENST00000538050.1	alternative 5' UTR
ENST00000538050.1	gene fragments AC154092.1-001, up to AC154092.1-014 are part of the same gene; an assembly gap between them contains one or more exons
ENST00000545466.1	gene fragments AC154092.1-001, up to AC154092.1-014 are part of the same gene; an assembly gap between them contains one or more exons
ENST00000536092.1	gene fragments AC154092.1-001, up to AC154092.1-014 are part of the same gene; an assembly gap between them contains one or more exons
ENST00000266542.9	MANE_select
ENST00000619522.2	non canonical TEC
ENST00000266560.8	MANE_select
ENST00000541953.5	alternative 5' UTR
ENST00000266546.11	MANE_select
ENST00000535452.5	alternative 5' UTR
ENST00000534830.5	QC splicing correct
ENST00000534830.5	alternative 5' UTR
ENST00000535313.2	CAGE supported TSS
ENST00000649358.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000542539.5	alternative 5' UTR
ENST00000540398.5	alternative 5' UTR
ENST00000543974.5	QC splicing correct
ENST00000543974.5	alternative 5' UTR
ENST00000675855.1	CAGE supported TSS
ENST00000675855.1	MANE_select
ENST00000434354.6	NP_001124495
ENST00000544456.5	alternative 5' UTR
ENST00000420616.6	alternative 5' UTR
ENST00000396637.7	alternative 5' UTR
ENST00000536841.5	alternative 5' UTR
ENST00000545845.1	alternative 5' UTR
ENST00000399422.4	not organism-supported
ENST00000539726.5	alternative 3' UTR
ENST00000313599.8	MANE_select
ENST00000432237.3	MANE_select
ENST00000229304.5	MANE_select
ENST00000329913.4	MANE_select
ENST00000345088.3	MANE_select
ENST00000360345.8	MANE_select
ENST00000360345.8	alternative 5' UTR
ENST00000382119.1	MANE_select
ENST00000541267.5	QC splicing correct
ENST00000229307.9	MANE_select
ENST00000526434.2	NMD likely if extended
ENST00000340749.9	alternative 5' UTR
ENST00000431042.7	MANE_select
ENST00000396589.6	alternative 5' UTR
ENST00000546234.5	alternative 5' UTR
ENST00000542782.5	alternative 5' UTR
ENST00000535344.5	alternative 5' UTR
ENST00000537557.5	alternative 5' UTR
ENST00000535266.5	alternative 5' UTR
ENST00000542916.5	alternative 5' UTR
ENST00000535383.5	alternative 5' UTR
ENST00000535587.5	alternative 5' UTR
ENST00000667941.1	Assembled from SLRseq reads (SRP049776)
ENST00000075120.12	MANE_select
ENST00000661633.1	Assembled from SLRseq reads (SRP049776)
ENST00000162391.8	MANE_select
ENST00000307637.5	MANE_select
ENST00000546241.1	alternative 5' UTR
ENST00000339754.11	MANE_select
ENST00000339754.11	genebuild_only_MANE
ENST00000546339.2	NMD likely if extended
ENST00000229332.12	MANE_select
ENST00000396570.7	alternative 5' UTR
ENST00000653230.1	Assembled from SLRseq reads (SRP049776)
ENST00000538603.6	MANE_select
ENST00000538603.6	alternative 5' UTR
ENST00000442295.2	alternative 5' UTR
ENST00000427893.2	QC splicing correct
ENST00000666548.1	Assembled from SLRseq reads (SRP049776)
ENST00000669735.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656887.1	Assembled from SLRseq reads (SRP049776)
ENST00000535746.5	QC splicing correct
ENST00000382073.4	MANE_select
ENST00000382064.6	alternative 5' UTR
ENST00000299665.3	MANE_select
ENST00000299663.8	MANE_select
ENST00000229335.11	MANE_select
ENST00000359478.7	MANE_select
ENST00000544889.1	alternative 5' UTR
ENST00000541044.5	alternative 5' UTR
ENST00000539923.5	alternative 5' UTR
ENST00000535829.6	MANE_select
ENST00000656408.1	Assembled from SLRseq reads (SRP049776)
ENST00000654855.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000514568.2	QC splicing correct
ENST00000394240.3	QC splicing correct
ENST00000299698.12	MANE_select
ENST00000541459.5	alternative 3' UTR
ENST00000540049.1	upstream uORF
ENST00000631830.1	CAGE supported TSS
ENST00000538657.5	alternative 5' UTR
ENST00000544916.6	MANE_select
ENST00000544916.6	alternative 5' UTR
ENST00000542346.1	QC splicing correct
ENST00000541507.1	not organism-supported
ENST00000543845.1	alternative 5' UTR
ENST00000543159.1	alternative 5' UTR
ENST00000356986.8	MANE_select
ENST00000667950.1	Assembled from SLRseq reads (SRP049776)
ENST00000670582.1	Assembled from SLRseq reads (SRP049776)
ENST00000648157.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000543436.2	QC splicing correct
ENST00000318602.12	MANE_select
ENST00000404455.2	alternative 5' UTR
ENST00000261336.7	MANE_select
ENST00000540995.5	NAGNAG splice site
ENST00000538219.1	QC splicing correct
ENST00000647751.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000659900.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652834.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664173.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663918.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670355.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656801.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668237.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657625.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656726.1	Assembled from SLRseq reads (SRP049776)
ENST00000662934.1	Assembled from RACEseq reads
ENST00000652814.1	Assembled from RACEseq reads
ENST00000659516.1	Assembled from SLRseq reads (SRP049776)
ENST00000229402.4	MANE_select
ENST00000653830.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671276.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000290855.11	MANE_select
ENST00000228434.7	MANE_select
ENST00000617889.5	MANE_select
ENST00000228438.3	MANE_select
ENST00000535540.1	MANE_select
ENST00000455827.2	MANE_select
ENST00000667501.1	Assembled from SLRseq reads (SRP049776)
ENST00000663603.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000655933.1	Assembled from SLRseq reads (SRP049776)
ENST00000670937.1	Assembled from SLRseq reads (SRP049776)
ENST00000304361.9	MANE_select
ENST00000396507.7	QC splicing correct
ENST00000396507.7	alternative 5' UTR
ENST00000355819.6	MANE_select
ENST00000315330.8	MANE_select
ENST00000414501.2	alternative 5' UTR
ENST00000304084.13	MANE_select
ENST00000310002.4	NP_922945
ENST00000309539.8	MANE_select
ENST00000544577.5	QC splicing correct
ENST00000543484.1	alternative 5' UTR
ENST00000539408.5	QC splicing correct
ENST00000545859.5	QC splicing correct
ENST00000545859.5	alternative 5' UTR
ENST00000266458.10	MANE_select
ENST00000545887.1	alternative 5' UTR
ENST00000539170.5	alternative 5' UTR
ENST00000544747.5	alternative 5' UTR
ENST00000336164.9	MANE_select
ENST00000336164.9	genebuild_only_MANE
ENST00000539374.1	QC splicing correct
ENST00000539792.1	QC splicing correct
ENST00000663376.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665123.1	Assembled from SLRseq reads (SRP049776)
ENST00000666750.1	Assembled from SLRseq reads (SRP049776)
ENST00000654540.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671087.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000240618.11	MANE_select
ENST00000540818.5	alternative 5' UTR
ENST00000543572.6	alternative 3' UTR
ENST00000543812.5	alternative 3' UTR
ENST00000585711.5	alternative 3' UTR
ENST00000586581.5	alternative 3' UTR
ENST00000591546.5	alternative 3' UTR
ENST00000591546.5	alternative 5' UTR
ENST00000590131.5	alternative 3' UTR
ENST00000588263.5	alternative 3' UTR
ENST00000588263.5	alternative 5' UTR
ENST00000590323.5	alternative 3' UTR
ENST00000590323.5	alternative 5' UTR
ENST00000585507.5	alternative 3' UTR
ENST00000591937.1	alternative 3' UTR
ENST00000591937.1	alternative 5' UTR
ENST00000396439.7	MANE_select
ENST00000381902.7	MANE_select
ENST00000536833.6	QC splicing correct
ENST00000359151.8	MANE_select
ENST00000347831.9	alternative 5' UTR
ENST00000538173.1	not best-in-genome evidence
ENST00000652990.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000510134.6	QC splicing correct
ENST00000320756.7	MANE_select
ENST00000075503.8	MANE_select
ENST00000542562.5	alternative 5' UTR
ENST00000538867.5	alternative 5' UTR
ENST00000535345.5	alternative 5' UTR
ENST00000541561.1	alternative 5' UTR
ENST00000228251.9	MANE_select
ENST00000540188.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000540188.2	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000541949.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656813.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660451.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667977.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000544815.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656609.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669563.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656544.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668788.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665090.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000240687.2	MANE_select
ENST00000240615.3	MANE_select
ENST00000240691.4	MANE_select
ENST00000538332.2	alternative 3' UTR
ENST00000228811.8	MANE_select
ENST00000390677.2	MANE_select
ENST00000396400.4	MANE_select
ENST00000537503.2	upstream ATG
ENST00000506868.1	MANE_select
ENST00000390673.2	MANE_select
ENST00000390675.2	MANE_select
ENST00000533467.1	MANE_select
ENST00000531678.1	MANE_select
ENST00000622602.2	MANE_select
ENST00000334266.1	MANE_select
ENST00000538488.2	QC splicing correct
ENST00000279575.7	MANE_select
ENST00000279575.7	NP_002714.2
ENST00000545626.5	NP_955386.1
ENST00000240636.10	confirm experimentally
ENST00000500254.6	NP_955385.1
ENST00000389362.6	MANE_select
ENST00000389362.6	NP_006239.3
ENST00000539178.5	QC splicing correct
ENST00000653546.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665563.1	Assembled from RACEseq reads
ENST00000545239.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667189.1	Assembled from SLRseq reads (SRP049776)
ENST00000396373.9	MANE_select
ENST00000589718.5	alternative 5' UTR
ENST00000464885.6	alternative 5' UTR
ENST00000308721.9	MANE_select
ENST00000396367.5	alternative 5' UTR
ENST00000266434.8	NMD exception
ENST00000588270.1	alternative 5' UTR
ENST00000261349.9	MANE_select
ENST00000540415.1	NMD likely if extended
ENST00000540415.1	QC splicing correct
ENST00000535902.6	MANE_select
ENST00000545735.1	alternative 5' UTR
ENST00000543314.1	alternative 5' UTR
ENST00000314565.9	MANE_select
ENST00000298573.9	MANE_select
ENST00000539940.1	alternative 5' UTR
ENST00000541207.1	alternative 5' UTR
ENST00000228865.3	MANE_select
ENST00000651487.1	MANE_select
ENST00000651487.1	genebuild_only_MANE
ENST00000540796.5	alternative 5' UTR
ENST00000228872.9	MANE_select
ENST00000442489.1	QC splicing correct
ENST00000534843.1	alternative 3' UTR
ENST00000356591.5	MANE_select
ENST00000358007.7	MANE_select
ENST00000014914.6	MANE_select
ENST00000534831.1	alternative 5' UTR
ENST00000648791.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000660059.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000543515.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000542078.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000396333.3	QC splicing correct
ENST00000014930.9	MANE_select
ENST00000647702.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000197268.13	MANE_select
ENST00000651961.1	MANE_select
ENST00000542474.5	alternative 5' UTR
ENST00000256951.10	MANE_select
ENST00000664966.1	Assembled from SLRseq reads (SRP049776)
ENST00000609686.4	CAGE supported TSS
ENST00000609686.4	MANE_select
ENST00000630791.2	alternative 5' UTR
ENST00000627535.2	alternative 5' UTR
ENST00000652867.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000536444.5	NAGNAG splice site
ENST00000542967.1	alternative 5' UTR
ENST00000534828.1	alternative 5' UTR
ENST00000535132.1	alternative 5' UTR
ENST00000542991.1	alternative 5' UTR
ENST00000541056.1	alternative 5' UTR
ENST00000539057.1	alternative 5' UTR
ENST00000545769.1	alternative 5' UTR
ENST00000428217.6	alternative 5' UTR
ENST00000396279.2	alternative 5' UTR
ENST00000542514.5	QC splicing correct
ENST00000542514.5	alternative 5' UTR
ENST00000536279.1	alternative 5' UTR
ENST00000542508.1	alternative 5' UTR
ENST00000240617.10	MANE_select
ENST00000655882.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000542401.2	Assembled from SLRseq reads (SRP049776)
ENST00000660979.1	Assembled from SLRseq reads (SRP049776)
ENST00000261170.5	MANE_select
ENST00000537096.1	QC splicing correct
ENST00000261167.7	MANE_select
ENST00000535638.5	QC splicing correct
ENST00000535328.1	alternative 5' UTR
ENST00000648334.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000330828.3	MANE_select
ENST00000527783.1	QC splicing correct
ENST00000316048.2	MANE_select
ENST00000651868.1	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000228936.6	MANE_select
ENST00000539261.6	MANE_select
ENST00000266397.7	MANE_select
ENST00000228945.9	MANE_select
ENST00000541644.5	alternative 5' UTR
ENST00000541546.5	alternative 5' UTR
ENST00000545895.5	alternative 5' UTR
ENST00000542276.1	alternative 5' UTR
ENST00000266395.3	MANE_select
ENST00000542689.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000256953.6	MANE_select
ENST00000538313.5	alternative 5' UTR
ENST00000536465.5	alternative 5' UTR
ENST00000393736.3	alternative 5' UTR
ENST00000674316.1	alternative 3' UTR
ENST00000281171.9	MANE_select
ENST00000674261.1	alternative 3' UTR
ENST00000545023.1	QC splicing correct
ENST00000674286.1	CAGE supported TSS
ENST00000674388.1	CAGE supported TSS
ENST00000542557.5	CAGE supported TSS
ENST00000445537.6	CAGE supported TSS
ENST00000445537.6	alternative 3' UTR
ENST00000544244.5	CAGE supported TSS
ENST00000544244.5	alternative 3' UTR
ENST00000442921.7	CAGE supported TSS
ENST00000442921.7	alternative 5' UTR
ENST00000544706.2	CAGE supported TSS
ENST00000544706.2	alternative 3' UTR
ENST00000674220.1	CAGE supported TSS
ENST00000281172.10	CAGE supported TSS
ENST00000281172.10	LR annotation
ENST00000281172.10	MANE_select
ENST00000543523.5	alternative 5' UTR
ENST00000644374.1	LR annotation
ENST00000646918.1	alternative 5' UTR
ENST00000642939.1	upstream ATG
ENST00000645775.1	alternative 5' UTR
ENST00000645775.1	upstream ATG
ENST00000646828.1	alternative 5' UTR
ENST00000646828.1	upstream ATG
ENST00000647224.1	alternative 5' UTR
ENST00000647224.1	upstream ATG
ENST00000642278.1	alternative 5' UTR
ENST00000647087.1	alternative 5' UTR
ENST00000647087.1	upstream ATG
ENST00000543612.5	alternative 5' UTR
ENST00000546311.5	alternative 5' UTR
ENST00000535752.5	alternative 5' UTR
ENST00000543363.5	alternative 5' UTR
ENST00000536793.5	alternative 5' UTR
ENST00000544064.1	alternative 5' UTR
ENST00000419869.7	MANE_select
ENST00000524480.5	alternative 5' UTR
ENST00000428559.7	MANE_select
ENST00000533447.5	alternative 5' UTR
ENST00000344941.3	MANE_select
ENST00000344941.3	QC splicing correct
ENST00000536371.5	alternative 5' UTR
ENST00000396210.8	MANE_select
ENST00000540126.5	alternative 5' UTR
ENST00000538885.5	alternative 5' UTR
ENST00000396207.1	alternative 5' UTR
ENST00000624056.1	confirm experimentally
ENST00000667547.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000537304.6	MANE_select
ENST00000537304.6	alternative 5' UTR
ENST00000441439.6	alternative 5' UTR
ENST00000447609.5	alternative 5' UTR
ENST00000320122.10	alternative 5' UTR
ENST00000535535.5	alternative 5' UTR
ENST00000534946.5	alternative 5' UTR
ENST00000541846.5	alternative 5' UTR
ENST00000544754.1	not organism-supported
ENST00000539534.5	alternative 5' UTR
ENST00000546281.5	alternative 5' UTR
ENST00000537757.5	alternative 5' UTR
ENST00000546279.5	alternative 5' UTR
ENST00000538051.5	alternative 5' UTR
ENST00000545436.5	alternative 5' UTR
ENST00000540590.1	alternative 5' UTR
ENST00000538020.1	alternative 5' UTR
ENST00000418574.3	QC splicing correct
ENST00000671332.1	Assembled from SLRseq reads (SRP049776)
ENST00000667066.1	Assembled from SLRseq reads (SRP049776)
ENST00000649143.1	non canonical U12
ENST00000671686.1	Assembled from SLRseq reads (SRP049776)
ENST00000655998.1	Assembled from SLRseq reads (SRP049776)
ENST00000669683.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654525.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658328.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663525.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660415.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671474.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000540399.1	QC splicing correct
ENST00000657845.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664390.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653611.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000538724.6	MANE_select
ENST00000535651.5	QC splicing correct
ENST00000538779.6	MANE_select
ENST00000648272.1	non canonical U12
ENST00000318197.10	NAGNAG splice site
ENST00000318197.10	non canonical conserved
ENST00000266505.12	MANE_select
ENST00000266505.12	NAGNAG at exon 4
ENST00000266505.12	NAGNAG splice site
ENST00000266505.12	non canonical conserved
ENST00000539875.5	non canonical conserved
ENST00000539207.5	NAGNAG splice site
ENST00000539207.5	non canonical conserved
ENST00000535429.1	non canonical conserved
ENST00000541966.5	NAGNAG splice site
ENST00000541109.1	NAGNAG splice site
ENST00000544849.1	non canonical conserved
ENST00000317658.5	MANE_select
ENST00000429027.7	MANE_select
ENST00000538714.5	NP_001137293.2
ENST00000538305.5	alternative 5' UTR
ENST00000501211.2	non canonical TEC
ENST00000266508.14	MANE_select
ENST00000669833.1	Assembled from SLRseq reads (SRP049776)
ENST00000654522.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665730.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659620.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659346.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656578.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655208.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665410.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670447.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655042.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670018.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670792.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000359062.4	MANE_select
ENST00000266509.7	MANE_select
ENST00000381545.8	MANE_select
ENST00000381545.8	upstream ATG
ENST00000545880.1	QC splicing correct
ENST00000256958.3	MANE_select
ENST00000413682.5	alternative 5' UTR
ENST00000422327.5	alternative 5' UTR
ENST00000453443.5	alternative 5' UTR
ENST00000473830.5	Exon structure found using dotter
ENST00000421294.5	alternative 5' UTR
ENST00000450590.5	alternative 5' UTR
ENST00000435179.5	alternative 5' UTR
ENST00000445053.1	using parent gene object as TSS, protein is 34 aa long. Re-initiation occurs
ENST00000421287.5	alternative 5' UTR
ENST00000416627.1	alternative 5' UTR
ENST00000430803.1	alternative 5' UTR
ENST00000539393.5	alternative 5' UTR
ENST00000240652.8	CCDS8688
ENST00000240652.8	MANE_select
ENST00000537593.1	alternative 5' UTR
ENST00000535428.1	QC splicing correct
ENST00000240651.14	MANE_select
ENST00000444129.7	MANE_select
ENST00000421138.6	alternative 5' UTR
ENST00000396093.7	alternative 5' UTR
ENST00000314748.10	alternative 5' UTR
ENST00000542432.5	alternative 5' UTR
ENST00000536240.5	alternative 5' UTR
ENST00000536964.5	alternative 5' UTR
ENST00000539672.1	alternative 5' UTR
ENST00000229314.10	MANE_select
ENST00000256969.7	MANE_select
ENST00000535033.5	CAGE supported TSS
ENST00000546199.1	CAGE supported TSS
ENST00000261195.3	LR annotation
ENST00000261195.3	MANE_select
ENST00000648372.1	NMD likely if extended
ENST00000396076.5	alternative 5' UTR
ENST00000350669.5	MANE_select
ENST00000396075.5	alternative 5' UTR
ENST00000450584.5	alternative 5' UTR
ENST00000539782.1	alternative 5' UTR
ENST00000240662.3	LR annotation
ENST00000240662.3	MANE_select
ENST00000665145.1	alternative 5' UTR
ENST00000667884.1	alternative 5' UTR
ENST00000537950.1	alternative 5' UTR
ENST00000261200.9	CAGE supported TSS
ENST00000544039.5	QC splicing correct
ENST00000229329.7	MANE_select
ENST00000535610.5	QC splicing correct
ENST00000544732.5	QC splicing correct
ENST00000396037.9	MANE_select
ENST00000661495.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000508615.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658064.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670175.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670175.1	QC splicing correct
ENST00000446597.5	alternative 5' UTR
ENST00000539615.1	QC splicing correct
ENST00000542683.1	QC splicing correct
ENST00000540703.1	not organism-supported
ENST00000543604.1	non canonical TEC
ENST00000335148.8	NP_001034570
ENST00000335148.8	upstream ATG
ENST00000266517.9	LR annotation
ENST00000266517.9	MANE_select
ENST00000266517.9	upstream ATG
ENST00000538218.2	alternative 3' UTR
ENST00000538317.6	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000540895.6	Assembled from SLRseq reads (SRP049776)
ENST00000660841.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651851.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000625240.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451604.7	MANE_select
ENST00000446891.7	QC splicing correct
ENST00000536850.1	QC splicing correct
ENST00000546118.1	QC splicing correct
ENST00000670751.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657983.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662250.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662250.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000666329.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655279.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668226.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662701.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665959.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656072.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668312.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668875.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654390.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000539583.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665769.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659871.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661840.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660859.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653796.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661451.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660002.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666550.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669229.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654709.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666553.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000261192.12	MANE_select
ENST00000261192.12	upstream uORF
ENST00000555165.1	QC splicing correct
ENST00000555165.1	confirm experimentally
ENST00000557489.5	alternative 5' UTR
ENST00000354454.7	alternative 5' UTR
ENST00000556887.5	alternative 5' UTR
ENST00000554942.5	alternative 5' UTR
ENST00000547044.5	alternative 5' UTR
ENST00000395987.8	FLJ35783
ENST00000395987.8	MANE_select
ENST00000556006.6	QC splicing correct
ENST00000554347.1	alternative 5' UTR
ENST00000555240.1	QC splicing correct
ENST00000381356.9	MANE_select
ENST00000381356.9	alternative 5' UTR
ENST00000556351.6	alternative 5' UTR
ENST00000556927.6	alternative 5' UTR
ENST00000556402.6	alternative 5' UTR
ENST00000556198.2	alternative 5' UTR
ENST00000256078.10	LR annotation
ENST00000311936.8	LR annotation
ENST00000311936.8	MANE_select
ENST00000557334.5	QC splicing correct
ENST00000543629.5	alternative 3' UTR
ENST00000539523.1	alternative 3' UTR
ENST00000545729.6	Assembled from SLRseq reads (SRP049776)
ENST00000671391.1	Assembled from SLRseq reads (SRP049776)
ENST00000658700.1	Assembled from SLRseq reads (SRP049776)
ENST00000663439.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000665934.1	Assembled from SLRseq reads (SRP049776)
ENST00000660703.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660703.1	Assembled from SLRseq reads (SRP049776)
ENST00000657944.1	Assembled from SLRseq reads (SRP049776)
ENST00000670839.1	Assembled from SLRseq reads (SRP049776)
ENST00000669929.1	Assembled from SLRseq reads (SRP049776)
ENST00000537801.2	Assembled from SLRseq reads (SRP049776)
ENST00000663256.1	Assembled from SLRseq reads (SRP049776)
ENST00000671454.1	Assembled from SLRseq reads (SRP049776)
ENST00000546134.5	QC splicing correct
ENST00000656802.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000535907.5	alternative 5' UTR
ENST00000542865.5	alternative 5' UTR
ENST00000542004.5	alternative 5' UTR
ENST00000542315.5	alternative 5' UTR
ENST00000537946.5	alternative 5' UTR
ENST00000541218.5	alternative 5' UTR
ENST00000282884.13	alternative 5' UTR
ENST00000545413.1	alternative 5' UTR
ENST00000242728.5	MANE_select
ENST00000538142.5	alternative 5' UTR
ENST00000540266.5	alternative 5' UTR
ENST00000242729.7	MANE_select
ENST00000671460.1	Assembled from SLRseq reads (SRP049776)
ENST00000537525.6	Assembled from SLRseq reads (SRP049776)
ENST00000659327.1	Assembled from SLRseq reads (SRP049776)
ENST00000539552.1	QC splicing correct
ENST00000381340.8	MANE_select
ENST00000261191.12	MANE_select
ENST00000542392.4	QC splicing correct
ENST00000544548.5	alternative 5' UTR
ENST00000537336.1	alternative 5' UTR
ENST00000229395.8	MANE_select
ENST00000544111.5	alternative 5' UTR
ENST00000343028.9	MANE_select
ENST00000545600.1	alternative 5' UTR
ENST00000500632.1	QC splicing correct
ENST00000282892.4	MANE_select
ENST00000429849.3	MANE_select
ENST00000429849.3	NP_001073875
ENST00000541191.5	alternative 5' UTR
ENST00000389032.8	MANE_select
ENST00000540996.5	alternative 5' UTR
ENST00000543246.5	alternative 5' UTR
ENST00000544969.5	alternative 5' UTR
ENST00000457040.6	non canonical TEC
ENST00000457040.6	rs71541524, SNP at C in TC non canonical
ENST00000298876.8	QC splicing correct
ENST00000538433.5	alternative 5' UTR
ENST00000228425.11	MANE_select
ENST00000535575.1	alternative 5' UTR
ENST00000536317.5	non canonical polymorphism
ENST00000656583.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000536922.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000542660.1	non canonical polymorphism
ENST00000310791.4	MANE_select
ENST00000081029.8	MANE_select
ENST00000381273.4	MANE_select
ENST00000381271.7	MANE_select
ENST00000543527.1	QC splicing correct
ENST00000545234.6	MANE_select
ENST00000539239.5	alternative 5' UTR
ENST00000542963.1	QC splicing correct
ENST00000542963.1	alternative 5' UTR
ENST00000534890.1	not organism-supported
ENST00000538586.5	alternative 5' UTR
ENST00000543534.5	alternative 5' UTR
ENST00000662829.1	Assembled from SLRseq reads (SRP049776)
ENST00000536681.8	MANE_select
ENST00000182377.8	alternative 5' UTR
ENST00000547759.1	not organism-supported
ENST00000655500.1	Assembled from SLRseq reads (SRP049776)
ENST00000360150.9	MANE_select
ENST00000549182.1	QC splicing correct
ENST00000546839.5	alternative 5' UTR
ENST00000552132.5	alternative 5' UTR
ENST00000548441.1	alternative 5' UTR
ENST00000550906.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000318184.9	non canonical TEC
ENST00000539277.6	MANE_select
ENST00000552618.5	QC splicing correct
ENST00000549070.1	non canonical TEC
ENST00000653361.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000552182.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666420.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660164.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663022.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655472.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000256079.9	MANE_select
ENST00000540979.1	not organism-supported
ENST00000548676.5	NAGNAG splice site
ENST00000537108.5	non canonical TEC
ENST00000546076.6	MANE_select
ENST00000261177.10	alternative 5' UTR
ENST00000537555.1	QC splicing correct
ENST00000669174.1	Assembled from SLRseq reads (SRP049776)
ENST00000542838.6	MANE_select
ENST00000435753.6	QC splicing correct
ENST00000539049.5	QC splicing correct
ENST00000415475.6	alternative 5' UTR
ENST00000542244.5	QC splicing correct
ENST00000535317.5	downstream ATG
ENST00000544652.1	NMD likely if extended
ENST00000544652.1	QC splicing correct
ENST00000538345.1	QC splicing correct
ENST00000542661.1	QC splicing correct
ENST00000539702.1	QC splicing correct
ENST00000391394.4	CAGE supported TSS
ENST00000337682.9	MANE_select
ENST00000454658.6	alternative 5' UTR
ENST00000539004.5	alternative 5' UTR
ENST00000543615.1	alternative 5' UTR
ENST00000389082.10	MANE_select
ENST00000659799.1	Assembled from SLRseq reads (SRP049776)
ENST00000412352.6	alternative 5' UTR
ENST00000538463.5	alternative 5' UTR
ENST00000357721.3	MANE_select
ENST00000357721.3	alternative 5' UTR
ENST00000539633.1	alternative 5' UTR
ENST00000281471.11	MANE_select
ENST00000537562.5	alternative 5' UTR
ENST00000537562.5	upstream uORF
ENST00000536761.5	upstream uORF
ENST00000542781.5	upstream uORF
ENST00000535408.5	alternative 5' UTR
ENST00000537960.5	QC splicing correct
ENST00000537960.5	alternative 5' UTR
ENST00000340398.5	MANE_select
ENST00000662662.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000540924.5	alternative 5' UTR
ENST00000312561.9	MANE_select
ENST00000381054.3	alternative 5' UTR
ENST00000652176.1	MANE_select
ENST00000534526.7	CAGE supported TSS
ENST00000534526.7	MANE_select
ENST00000550091.5	NMD likely if extended
ENST00000531134.6	CAGE supported TSS
ENST00000472289.5	alternative 5' UTR
ENST00000551984.5	QC splicing correct
ENST00000583694.1	alternative 5' UTR
ENST00000525053.6	upstream ATG
ENST00000452533.6	upstream ATG
ENST00000549701.6	MANE_select
ENST00000546757.5	QC splicing correct
ENST00000324868.13	MANE_select
ENST00000548490.1	not organism-supported
ENST00000666291.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000340811.9	MANE_select
ENST00000228567.7	MANE_select
ENST00000567656.1	QC splicing correct
ENST00000538927.1	QC splicing correct
ENST00000266483.7	MANE_select
ENST00000664027.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664027.1	Assembled from SLRseq reads (SRP049776)
ENST00000537655.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656327.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662756.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660987.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666454.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671057.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000308742.9	MANE_select
ENST00000331366.10	MANE_select
ENST00000662938.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659930.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000668449.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000361418.10	MANE_select
ENST00000636569.1	NAGNAG splice site
ENST00000661347.1	Assembled from SLRseq reads (SRP049776)
ENST00000308666.4	MANE_select
ENST00000650487.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000405531.7	There is upstream N-terminal sequence additional to that in Tr:Q8IXY6 , but start not found
ENST00000324616.9	MANE_select
ENST00000324616.9	There is upstream N-terminal sequence additional to that in Tr:Q86WS4 , but start not found
ENST00000280871.9	MANE_select
ENST00000465517.1	FLJ20175
ENST00000669755.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661406.1	Assembled from SLRseq reads (SRP049776)
ENST00000298910.12	MANE_select
ENST00000343742.6	FLJ45829
ENST00000479187.5	DKFZp686E15222
ENST00000479187.5	FLJ16068
ENST00000479187.5	FLJ16769
ENST00000552757.1	QC splicing correct
ENST00000551295.7	MANE_select
ENST00000551424.5	alternative 5' UTR
ENST00000548005.5	alternative 5' UTR
ENST00000552248.5	alternative 5' UTR
ENST00000547849.5	alternative 5' UTR
ENST00000552913.5	alternative 5' UTR
ENST00000548481.1	QC splicing correct
ENST00000402685.7	MANE_select
ENST00000649474.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000667995.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671469.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000552712.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659353.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653328.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000548210.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657863.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666044.1	Assembled from SLRseq reads (SRP049776)
ENST00000662480.1	Assembled from SLRseq reads (SRP049776)
ENST00000398675.8	MANE_select
ENST00000534854.7	MANE_select
ENST00000358314.12	MANE_select
ENST00000266529.8	MANE_select
ENST00000345127.9	MANE_select
ENST00000639589.1	alternative 5' UTR
ENST00000445766.7	alternative 5' UTR
ENST00000640132.1	alternative 5' UTR
ENST00000455697.6	alternative 5' UTR
ENST00000640055.1	NAGNAG splice site
ENST00000640055.1	alternative 5' UTR
ENST00000639958.1	NAGNAG splice site
ENST00000639958.1	alternative 5' UTR
ENST00000548696.6	NAGNAG splice site
ENST00000548696.6	alternative 5' UTR
ENST00000639566.1	alternative 5' UTR
ENST00000552240.6	alternative 5' UTR
ENST00000552108.6	alternative 5' UTR
ENST00000640801.1	alternative 5' UTR
ENST00000551050.6	alternative 5' UTR
ENST00000547113.1	alternative 5' UTR
ENST00000640646.1	alternative 5' UTR
ENST00000660165.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000550337.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662847.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660815.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662561.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000660010.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667161.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655825.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655248.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000389420.8	MANE_select
ENST00000344862.10	MANE_select
ENST00000416848.6	alternative 5' UTR
ENST00000551923.5	alternative 5' UTR
ENST00000550784.5	alternative 5' UTR
ENST00000547156.1	alternative 5' UTR
ENST00000549868.1	alternative 5' UTR
ENST00000550616.5	alternative 5' UTR
ENST00000613694.5	MANE_select
ENST00000551736.5	alternative 5' UTR
ENST00000395510.7	MANE_select
ENST00000395510.7	upstream ATG
ENST00000548403.1	QC splicing correct
ENST00000266534.8	MANE_select
ENST00000550495.1	QC splicing correct
ENST00000669912.1	Assembled from SLRseq reads (SRP049776)
ENST00000429094.7	MANE_select
ENST00000452445.6	alternative 5' UTR
ENST00000333837.8	downstream ATG
ENST00000552993.5	QC splicing correct
ENST00000552993.5	alternative 5' UTR
ENST00000548531.1	alternative 5' UTR
ENST00000551949.1	alternative 5' UTR
ENST00000332700.6	MANE_select
ENST00000548424.1	QC splicing correct
ENST00000661467.1	Assembled from SLRseq reads (SRP049776)
ENST00000680498.1	align_id:3566542|asmbl_56707
ENST00000320560.13	MANE_select
ENST00000680201.1	align_id:3566541|asmbl_56706
ENST00000681156.1	align_id:3566540|asmbl_56705
ENST00000680371.1	align_id:3566544|asmbl_56709
ENST00000679761.1	align_id:3566543|asmbl_56708
ENST00000681817.1	align_id:3566539|asmbl_56704
ENST00000679426.1	align_id:3566538|asmbl_56703
ENST00000551229.3	Assembled from RACEseq reads
ENST00000609803.2	CAGE supported TSS
ENST00000334344.11	MANE_select
ENST00000427628.5	QC splicing correct
ENST00000479608.5	DKFZp686M229
ENST00000480128.1	FLJ30619
ENST00000369367.8	MANE_select
ENST00000398637.10	MANE_select
ENST00000549049.5	alternative 5' UTR
ENST00000439706.5	alternative 5' UTR
ENST00000546893.5	alternative 5' UTR
ENST00000256689.10	MANE_select
ENST00000667191.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663959.1	Assembled from SLRseq reads (SRP049776)
ENST00000666025.1	Assembled from SLRseq reads (SRP049776)
ENST00000666942.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000611243.2	Assembled from SLRseq reads (SRP049776)
ENST00000653856.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657145.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000266579.9	MANE_select
ENST00000266579.9	alternative 5' UTR
ENST00000547477.5	alternative 5' UTR
ENST00000546940.1	alternative 5' UTR
ENST00000266581.4	alternative 5' UTR
ENST00000550413.2	MANE_select
ENST00000550413.2	alternative 5' UTR
ENST00000546455.6	MANE_select
ENST00000549500.1	alternative 5' UTR
ENST00000549630.1	alternative 5' UTR
ENST00000551777.1	alternative 5' UTR
ENST00000547626.6	Assembled from SLRseq reads (SRP049776)
ENST00000663937.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659658.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660395.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659201.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648410.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000654817.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659511.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660540.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654304.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662412.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653282.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656812.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000005386.8	MANE_select
ENST00000653286.1	Assembled from SLRseq reads (SRP049776)
ENST00000667854.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000663280.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663280.1	Assembled from SLRseq reads (SRP049776)
ENST00000659426.1	Assembled from SLRseq reads (SRP049776)
ENST00000553045.2	Assembled from RACEseq reads
ENST00000422538.8	MANE_select
ENST00000449771.7	AT-AC splicing between exons 13 and 14
ENST00000449771.7	MANE_select
ENST00000449771.7	non canonical U12
ENST00000547856.5	non canonical U12
ENST00000549151.5	non canonical U12
ENST00000549151.5	upstream ATG
ENST00000482843.5	AT-AC splicing between exons 12 and 13
ENST00000482843.5	non canonical U12
ENST00000479866.5	AT-AC splicing between exons 11 and 12
ENST00000479866.5	non canonical U12
ENST00000389212.7	alternative 5' UTR
ENST00000389212.7	non canonical TEC
ENST00000389212.7	non canonical U12
ENST00000548919.5	AT-AC splicing between exons 13 and 14
ENST00000548919.5	non canonical U12
ENST00000548919.5	upstream ATG
ENST00000395358.7	non canonical U12
ENST00000495465.6	non canonical U12
ENST00000466322.5	alternative 5' UTR
ENST00000495953.2	alternative 5' UTR
ENST00000548498.5	alternative 5' UTR
ENST00000547002.5	alternative 5' UTR
ENST00000549243.5	alternative 5' UTR
ENST00000551301.1	non canonical TEC
ENST00000442218.3	MANE_select
ENST00000080059.12	MANE_select
ENST00000548080.5	QC splicing correct
ENST00000380610.8	non canonical TEC
ENST00000427332.6	confirm experimentally
ENST00000488927.2	QC splicing correct
ENST00000422254.5	alternative 5' UTR
ENST00000447463.5	alternative 5' UTR
ENST00000421231.5	alternative 5' UTR
ENST00000450805.5	alternative 5' UTR
ENST00000417902.5	alternative 5' UTR
ENST00000433685.5	alternative 5' UTR
ENST00000417107.5	alternative 5' UTR
ENST00000445237.2	alternative 5' UTR
ENST00000549336.6	MANE_select
ENST00000395324.6	alternative 5' UTR
ENST00000546653.5	alternative 5' UTR
ENST00000550314.5	alternative 5' UTR
ENST00000548664.1	alternative 5' UTR
ENST00000429772.7	MANE_select
ENST00000552561.5	alternative 5' UTR
ENST00000552546.5	non canonical conserved
ENST00000449758.6	alternative 5' UTR
ENST00000548640.5	non canonical conserved
ENST00000380518.8	MANE_select
ENST00000546738.1	QC splicing correct
ENST00000546738.1	non canonical TEC
ENST00000549518.6	MANE_select
ENST00000549518.6	alternative 5' UTR
ENST00000551798.1	QC splicing correct
ENST00000550345.6	alternative 5' UTR
ENST00000549003.5	alternative 5' UTR
ENST00000550924.6	alternative 5' UTR
ENST00000549941.7	upstream ATG
ENST00000550257.6	upstream ATG
ENST00000340802.12	CAGE supported TSS
ENST00000340802.12	LR annotation
ENST00000340802.12	downstream ATG
ENST00000546755.5	alternative 5' UTR
ENST00000546755.5	downstream ATG
ENST00000549366.5	downstream ATG
ENST00000552792.5	alternative 5' UTR
ENST00000552792.5	downstream ATG
ENST00000548288.5	alternative 5' UTR
ENST00000548288.5	downstream ATG
ENST00000551339.6	alternative 5' UTR
ENST00000552989.5	QC splicing correct
ENST00000359794.11	CAGE supported TSS
ENST00000359794.11	LR annotation
ENST00000359794.11	MANE_select
ENST00000549022.5	alternative 5' UTR
ENST00000547587.5	alternative 5' UTR
ENST00000546465.1	QC splicing correct
ENST00000317697.8	MANE_select
ENST00000536549.5	alternative 5' UTR
ENST00000537754.1	QC splicing correct
ENST00000536953.5	alternative 5' UTR
ENST00000539503.5	alternative 5' UTR
ENST00000545791.5	alternative 5' UTR
ENST00000540212.5	alternative 5' UTR
ENST00000540782.1	alternative 5' UTR
ENST00000548228.1	alternative 5' UTR
ENST00000316554.5	MANE_select
ENST00000647575.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000595310.1	CAGE supported TSS
ENST00000654485.1	Assembled from SLRseq reads (SRP049776)
ENST00000335017.1	MANE_select
ENST00000547026.6	MANE_select
ENST00000547026.6	NP_001166152
ENST00000448928.7	NP_001166153
ENST00000549125.5	QC splicing correct
ENST00000548932.5	QC splicing correct
ENST00000548932.5	alternative 5' UTR
ENST00000550181.5	alternative 5' UTR
ENST00000550342.1	alternative 5' UTR
ENST00000266594.4	MANE_select
ENST00000548364.7	CAGE supported TSS
ENST00000548364.7	MANE_select
ENST00000548364.7	non canonical polymorphism
ENST00000380491.7	non canonical polymorphism
ENST00000548913.1	QC splicing correct
ENST00000549398.5	non canonical polymorphism
ENST00000551266.1	non canonical polymorphism
ENST00000301046.6	MANE_select
ENST00000549817.1	not organism-supported
ENST00000420613.7	MANE_select
ENST00000550347.5	downstream ATG
ENST00000549463.5	QC splicing correct
ENST00000553086.5	QC splicing correct
ENST00000550870.1	alternative 5' UTR
ENST00000548304.1	alternative 5' UTR
ENST00000261900.8	MANE_select
ENST00000548380.6	MANE_select
ENST00000357869.8	alternative 5' UTR
ENST00000548351.1	NMD likely if extended
ENST00000552090.1	NMD likely if extended
ENST00000301050.7	MANE_select
ENST00000547392.5	QC splicing correct
ENST00000548279.5	NAGNAG splice site
ENST00000551544.5	QC splicing correct
ENST00000552812.1	non-splicing mRNA
ENST00000550483.5	QC splicing correct
ENST00000308025.8	MANE_select
ENST00000550834.1	not organism-supported
ENST00000552512.5	alternative 5' UTR
ENST00000551468.1	alternative 5' UTR
ENST00000550607.5	non canonical TEC
ENST00000309739.6	MANE_select
ENST00000649147.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000552942.5	QC splicing correct
ENST00000547861.5	NAGNAG splice site
ENST00000547861.5	QC splicing correct
ENST00000320516.5	MANE_select
ENST00000550765.6	MANE_select
ENST00000256682.9	MANE_select
ENST00000541959.5	alternative 5' UTR
ENST00000541236.5	alternative 5' UTR
ENST00000539611.1	alternative 5' UTR
ENST00000545855.1	alternative 5' UTR
ENST00000472621.1	QC splicing correct
ENST00000301061.9	MANE_select
ENST00000403957.5	QC splicing correct
ENST00000420388.1	alternative 5' UTR
ENST00000293549.4	MANE_select
ENST00000421952.3	MANE_select
ENST00000421952.3	NP_055901.2
ENST00000548362.5	non canonical TEC
ENST00000548065.7	MANE_select
ENST00000548950.5	QC splicing correct
ENST00000551121.5	QC splicing correct
ENST00000547125.1	QC splicing correct
ENST00000301067.12	MANE_select
ENST00000301068.11	MANE_select
ENST00000550675.1	not organism-supported
ENST00000649637.2	LR annotation
ENST00000649637.2	MANE_select
ENST00000417750.5	FLJ10494
ENST00000552577.5	non canonical TEC
ENST00000267102.13	MANE_select
ENST00000547670.5	non canonical TEC
ENST00000549296.1	QC splicing correct
ENST00000551782.5	alternative 5' UTR
ENST00000336023.9	MANE_select
ENST00000656133.1	Assembled from SLRseq reads (SRP049776)
ENST00000665211.1	Assembled from SLRseq reads (SRP049776)
ENST00000664160.1	Assembled from SLRseq reads (SRP049776)
ENST00000667827.1	Assembled from SLRseq reads (SRP049776)
ENST00000547939.6	CAGE supported TSS
ENST00000301071.12	MANE_select
ENST00000301072.11	MANE_select
ENST00000550468.2	QC splicing correct
ENST00000257860.9	MANE_select
ENST00000451891.4	QC splicing correct
ENST00000532332.2	NAGNAG splice site
ENST00000380327.9	NP_001094090
ENST00000257909.8	MANE_select
ENST00000547807.5	QC splicing correct
ENST00000551567.1	alternative 5' UTR
ENST00000334221.5	MANE_select
ENST00000549441.7	MANE_select
ENST00000549441.7	alternative 5' UTR
ENST00000647553.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000550997.5	alternative 5' UTR
ENST00000549538.5	alternative 5' UTR
ENST00000548654.5	alternative 5' UTR
ENST00000550643.5	alternative 5' UTR
ENST00000548710.5	alternative 5' UTR
ENST00000549179.5	alternative 5' UTR
ENST00000548377.5	alternative 5' UTR
ENST00000549298.5	alternative 5' UTR
ENST00000552918.6	MANE_select
ENST00000552918.6	alternative 5' UTR
ENST00000553127.5	alternative 5' UTR
ENST00000551540.5	alternative 5' UTR
ENST00000548777.5	alternative 5' UTR
ENST00000552171.1	alternative 5' UTR
ENST00000257981.7	MANE_select
ENST00000649994.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000343810.9	MANE_select
ENST00000550165.5	alternative 5' UTR
ENST00000548334.5	alternative 5' UTR
ENST00000548596.5	alternative 5' UTR
ENST00000549528.1	alternative 5' UTR
ENST00000551063.5	alternative 5' UTR
ENST00000548825.7	MANE_select
ENST00000532262.5	alternative 3' UTR
ENST00000257894.2	MANE_select
ENST00000335154.10	MANE_select
ENST00000550488.5	NAGNAG splice site
ENST00000550488.5	QC splicing correct
ENST00000549137.1	NAGNAG splice site
ENST00000549137.1	QC splicing correct
ENST00000548809.5	alternative 5' UTR
ENST00000551154.5	alternative 5' UTR
ENST00000546796.5	alternative 5' UTR
ENST00000549966.5	QC splicing correct
ENST00000549966.5	alternative 5' UTR
ENST00000547832.5	alternative 5' UTR
ENST00000547187.5	alternative 5' UTR
ENST00000548894.5	alternative 5' UTR
ENST00000546914.5	alternative 5' UTR
ENST00000552699.5	NP_001092046
ENST00000267115.10	MANE_select
ENST00000549445.5	alternative 5' UTR
ENST00000550951.5	alternative 5' UTR
ENST00000549385.5	QC splicing correct
ENST00000549385.5	alternative 5' UTR
ENST00000548713.5	alternative 5' UTR
ENST00000548201.5	alternative 5' UTR
ENST00000550445.5	alternative 5' UTR
ENST00000549130.5	alternative 5' UTR
ENST00000552370.5	alternative 5' UTR
ENST00000395006.8	alternative 5' UTR
ENST00000335999.7	MANE_select
ENST00000670504.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653240.1	Assembled from SLRseq reads (SRP049776)
ENST00000333924.6	MANE_select
ENST00000550861.1	QC splicing correct
ENST00000547902.2	QC splicing correct
ENST00000320634.8	MANE_select
ENST00000550635.6	alternative 5' UTR
ENST00000657051.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663839.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656471.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667803.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659762.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000547954.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670752.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663722.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655869.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665234.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664245.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000551539.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664985.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658656.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670552.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654198.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655893.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669303.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670836.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669495.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665167.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665167.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000669550.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670334.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654781.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657679.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664524.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666165.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663596.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656286.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668699.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657128.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661879.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659513.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653208.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660860.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653417.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670201.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667611.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667671.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669347.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663037.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664860.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655750.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666502.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657295.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658365.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658170.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662801.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668877.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664040.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668476.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667663.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661149.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656507.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670023.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665771.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662741.1	Assembled from SLRseq reads (SRP049776)
ENST00000199280.4	MANE_select
ENST00000551526.5	QC splicing correct
ENST00000550862.1	QC splicing correct
ENST00000552806.1	QC splicing correct
ENST00000293599.7	MANE_select
ENST00000551733.5	upstream ATG
ENST00000315520.10	MANE_select
ENST00000427314.6	alternative 5' UTR
ENST00000312377.10	MANE_select
ENST00000454520.6	alternative 5' UTR
ENST00000551016.5	alternative 5' UTR
ENST00000547905.5	alternative 5' UTR
ENST00000552310.5	alternative 5' UTR
ENST00000548824.5	alternative 5' UTR
ENST00000548644.5	downstream ATG
ENST00000546723.5	alternative 5' UTR
ENST00000552921.5	alternative 5' UTR
ENST00000546764.5	alternative 5' UTR
ENST00000551876.5	alternative 5' UTR
ENST00000549777.5	alternative 5' UTR
ENST00000550651.5	alternative 5' UTR
ENST00000552004.2	alternative 5' UTR
ENST00000447966.7	MANE_select
ENST00000552633.2	NMD exception
ENST00000552633.2	QC splicing correct
ENST00000394963.9	MANE_select
ENST00000549526.1	QC splicing correct
ENST00000547190.5	QC splicing correct
ENST00000301149.8	MANE_select
ENST00000317943.6	alternative 5' UTR
ENST00000550654.1	alternative 5' UTR
ENST00000550487.6	MANE_select
ENST00000548985.1	alternative 5' UTR
ENST00000317551.12	MANE_select
ENST00000549942.1	NMD likely if extended
ENST00000552491.5	NAGNAG splice site
ENST00000547825.5	NAGNAG splice site
ENST00000552823.5	NAGNAG splice site
ENST00000394943.7	NAGNAG splice site
ENST00000341247.8	NAGNAG splice site
ENST00000552783.5	NAGNAG splice site
ENST00000552783.5	NP_001107019
ENST00000552909.5	NAGNAG splice site
ENST00000552720.5	NAGNAG splice site
ENST00000552338.5	NAGNAG splice site
ENST00000551691.5	alternative 5' UTR
ENST00000550592.1	alternative 5' UTR
ENST00000543111.5	confirm experimentally
ENST00000539751.1	QC splicing correct
ENST00000327337.6	MANE_select
ENST00000327337.6	confirm experimentally
ENST00000550522.5	alternative 5' UTR
ENST00000398473.7	MANE_select
ENST00000548697.5	QC splicing correct
ENST00000548697.5	alternative 5' UTR
ENST00000548993.5	alternative 5' UTR
ENST00000518444.5	NAGNAG splice site
ENST00000551886.5	NAGNAG splice site
ENST00000523389.5	alternative 5' UTR
ENST00000347328.9	NP_954660.1
ENST00000550260.1	NAGNAG splice site
ENST00000517559.5	alternative 5' UTR
ENST00000552445.1	alternative 5' UTR
ENST00000301180.10	MANE_select
ENST00000552510.5	alternative 5' UTR
ENST00000262053.8	MANE_select
ENST00000552487.1	QC splicing correct
ENST00000552487.1	alternative 5' UTR
ENST00000398458.4	MANE_select
ENST00000550502.1	alternative 5' UTR
ENST00000332160.5	MANE_select
ENST00000332160.5	genebuild_only_MANE
ENST00000550097.1	QC splicing correct
ENST00000644495.1	CAGE supported TSS
ENST00000644495.1	LR annotation
ENST00000547688.7	CAGE supported TSS
ENST00000262052.9	CAGE supported TSS
ENST00000262052.9	LR annotation
ENST00000262052.9	MANE_select
ENST00000394904.9	CAGE supported TSS
ENST00000541174.6	alternative 5' UTR
ENST00000545993.7	CAGE supported TSS
ENST00000646988.1	alternative 5' UTR
ENST00000549625.1	QC splicing correct
ENST00000549193.5	NMD likely if extended
ENST00000681324.1	alternative 5' UTR
ENST00000550995.5	NMD likely if extended
ENST00000262055.9	MANE_select
ENST00000547877.5	QC splicing correct
ENST00000228515.6	MANE_select
ENST00000548981.5	alternative 5' UTR
ENST00000552899.5	alternative 5' UTR
ENST00000552899.5	non canonical TEC
ENST00000546935.5	alternative 5' UTR
ENST00000550461.1	QC splicing correct
ENST00000257915.10	MANE_select
ENST00000548115.5	NAGNAG splice site
ENST00000636068.1	alternative 5' UTR
ENST00000636119.1	alternative 5' UTR
ENST00000547855.1	NMD likely if extended
ENST00000547855.1	QC splicing correct
ENST00000547855.1	alternative 5' UTR
ENST00000549555.5	QC splicing correct
ENST00000412716.8	MANE_select
ENST00000549732.6	NP_001136267.1
ENST00000436900.2	QC splicing correct
ENST00000603798.6	MANE_select
ENST00000398453.7	alternative 5' UTR
ENST00000603864.5	alternative 5' UTR
ENST00000605426.5	alternative 5' UTR
ENST00000603838.5	alternative 5' UTR
ENST00000615107.6	MANE_select
ENST00000615107.6	NP_057377.3|
ENST00000293636.2	MANE_select
ENST00000543196.6	alternative 5' UTR
ENST00000356317.8	MANE_select
ENST00000604381.5	alternative 5' UTR
ENST00000604847.5	alternative 5' UTR
ENST00000604426.5	alternative 5' UTR
ENST00000605617.5	alternative 5' UTR
ENST00000603188.5	alternative 5' UTR
ENST00000605138.5	alternative 5' UTR
ENST00000604506.5	alternative 5' UTR
ENST00000605055.5	alternative 5' UTR
ENST00000535225.6	alternative 5' UTR
ENST00000453097.7	MANE_select
ENST00000546961.1	alternative 5' UTR
ENST00000642069.1	CAGE supported TSS
ENST00000562343.2	QC splicing correct
ENST00000618634.3	MANE_select
ENST00000301190.11	MANE_select
ENST00000551576.5	alternative 5' UTR
ENST00000388922.9	MANE_select
ENST00000550683.5	QC splicing correct
ENST00000257963.9	MANE_select
ENST00000541224.5	NP_064733.3
ENST00000536420.5	alternative 5' UTR
ENST00000542485.1	NP_064732.3
ENST00000293662.9	MANE_select
ENST00000548977.5	alternative 5' UTR
ENST00000546842.5	alternative 5' UTR
ENST00000546842.5	upstream ATG
ENST00000553200.1	alternative 5' UTR
ENST00000553200.1	upstream ATG
ENST00000394825.6	MANE_select
ENST00000394825.6	genebuild_only_MANE
ENST00000394824.2	QC splicing correct
ENST00000564201.1	QC splicing correct
ENST00000550604.1	alternative 5' UTR
ENST00000553049.5	alternative 5' UTR
ENST00000548915.1	alternative 5' UTR
ENST00000546390.2	MANE_select
ENST00000546390.2	NMD exception
ENST00000667981.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653127.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658977.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663735.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669936.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669247.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668114.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656394.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656951.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667021.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665995.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668621.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661213.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000394815.3	MANE_select
ENST00000665543.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656354.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000551894.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000331817.6	MANE_select
ENST00000553310.6	alternative 5' UTR
ENST00000423955.7	MANE_select
ENST00000327741.9	MANE_select
ENST00000664686.1	Assembled from SLRseq reads (SRP049776)
ENST00000293670.3	CAGE supported TSS
ENST00000293670.3	LR annotation
ENST00000293670.3	MANE_select
ENST00000257901.7	MANE_select
ENST00000257951.3	MANE_select
ENST00000257974.3	MANE_select
ENST00000252245.6	MANE_select
ENST00000252252.4	MANE_select
ENST00000252250.7	MANE_select
ENST00000330722.7	LR annotation
ENST00000330722.7	MANE_select
ENST00000252242.9	MANE_select
ENST00000252242.9	overlapping uORF
ENST00000549420.1	QC splicing correct
ENST00000546577.1	alternative 5' UTR
ENST00000267119.6	MANE_select
ENST00000305620.3	MANE_select
ENST00000293745.7	MANE_select
ENST00000293745.7	genebuild_only_MANE
ENST00000305748.7	MANE_select
ENST00000309680.4	MANE_select
ENST00000252244.3	MANE_select
ENST00000341809.8	MANE_select
ENST00000332411.2	MANE_select
ENST00000417996.2	MANE_select
ENST00000551956.2	MANE_select
ENST00000551956.2	upstream ATG
ENST00000330553.6	MANE_select
ENST00000304620.5	MANE_select
ENST00000552551.5	alternative 5' UTR
ENST00000552551.5	overlapping uORF
ENST00000546897.5	alternative 5' UTR
ENST00000546826.5	alternative 5' UTR
ENST00000546826.5	overlapping uORF
ENST00000546542.1	upstream uORF
ENST00000550600.5	overlapping uORF
ENST00000388835.4	MANE_select
ENST00000262056.14	MANE_select
ENST00000552905.6	Assembled from SLRseq reads (SRP049776)
ENST00000546566.6	Assembled from SLRseq reads (SRP049776)
ENST00000668380.1	Assembled from SLRseq reads (SRP049776)
ENST00000667771.1	Assembled from SLRseq reads (SRP049776)
ENST00000666649.1	Assembled from SLRseq reads (SRP049776)
ENST00000663863.1	Assembled from SLRseq reads (SRP049776)
ENST00000653826.1	Assembled from SLRseq reads (SRP049776)
ENST00000657514.1	Assembled from SLRseq reads (SRP049776)
ENST00000662901.1	Assembled from SLRseq reads (SRP049776)
ENST00000670565.1	Assembled from SLRseq reads (SRP049776)
ENST00000662887.1	Assembled from SLRseq reads (SRP049776)
ENST00000660006.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660006.1	Assembled from SLRseq reads (SRP049776)
ENST00000662446.1	Assembled from SLRseq reads (SRP049776)
ENST00000657729.1	Assembled from SLRseq reads (SRP049776)
ENST00000669379.1	Assembled from SLRseq reads (SRP049776)
ENST00000654457.1	Assembled from SLRseq reads (SRP049776)
ENST00000656120.1	Assembled from SLRseq reads (SRP049776)
ENST00000658354.1	Assembled from SLRseq reads (SRP049776)
ENST00000379902.7	upstream ATG
ENST00000549311.7	QC splicing correct
ENST00000314250.11	MANE_select
ENST00000546602.5	confirm experimentally
ENST00000552570.5	confirm experimentally
ENST00000301463.9	MANE_select
ENST00000548547.5	QC splicing correct
ENST00000301464.4	MANE_select
ENST00000650247.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000650247.1	CAGE supported TSS
ENST00000549628.1	CAGE supported TSS
ENST00000301466.8	MANE_select
ENST00000267085.8	NP_057073.4
ENST00000444623.6	MANE_select
ENST00000475890.5	Cysteine sulfinic acid decarboxylase-related protein
ENST00000379846.5	QC splicing correct
ENST00000453446.6	QC splicing correct
ENST00000454442.5	NMD likely if extended
ENST00000416904.5	MANE_select
ENST00000267082.10	MANE_select
ENST00000422257.7	alternative 5' UTR
ENST00000550743.6	confirm experimentally
ENST00000552972.5	alternative 5' UTR
ENST00000552935.5	alternative 5' UTR
ENST00000549086.2	alternative 5' UTR
ENST00000425354.7	MANE_select
ENST00000425354.7	Retinoic acid receptor, gamma
ENST00000329548.5	MANE_select
ENST00000257934.9	CAGE supported TSS
ENST00000257934.9	MANE_select
ENST00000334478.9	MANE_select
ENST00000547228.1	QC splicing correct
ENST00000267103.10	MANE_select
ENST00000209873.9	LR annotation
ENST00000209873.9	MANE_select
ENST00000536324.4	MANE_select
ENST00000536324.4	Sw:Q8TDD2.1
ENST00000303846.3	alternative 5' UTR
ENST00000327443.9	MANE_select
ENST00000257863.9	MANE_select
ENST00000552233.5	NAGNAG splice site
ENST00000549924.5	alternative 5' UTR
ENST00000429243.7	MANE_select
ENST00000547368.5	downstream ATG
ENST00000551945.5	alternative 5' UTR
ENST00000549135.1	alternative 5' UTR
ENST00000546463.6	MANE_select
ENST00000546463.6	NP_114366.1
ENST00000549863.5	non canonical conserved
ENST00000359462.9	non canonical conserved
ENST00000552296.6	NAGNAG splice site
ENST00000552819.5	non canonical conserved
ENST00000439930.7	NAGNAG splice site
ENST00000439930.7	QC splicing correct
ENST00000439930.7	confirm experimentally
ENST00000439930.7	non canonical conserved
ENST00000548933.5	QC splicing correct
ENST00000548933.5	non canonical conserved
ENST00000546652.6	NMD likely if extended
ENST00000562264.5	NAGNAG splice site
ENST00000562264.5	non canonical conserved
ENST00000550585.5	non canonical conserved
ENST00000547987.2	QC splicing correct
ENST00000547987.2	non canonical conserved
ENST00000634357.1	transcribed ultraconserved RNA; KF041153
ENST00000547488.6	MANE_select
ENST00000547151.1	NMD likely if extended
ENST00000266987.7	MANE_select
ENST00000591834.1	not organism-supported
ENST00000548446.6	NMD exception
ENST00000420353.7	MANE_select
ENST00000456903.8	alternative 5' UTR
ENST00000588232.5	alternative 5' UTR
ENST00000551480.2	QC splicing correct
ENST00000588078.5	alternative 5' UTR
ENST00000548118.6	alternative 5' UTR
ENST00000550373.2	QC splicing correct
ENST00000548347.2	Assembled from SLRseq reads (SRP049776)
ENST00000648881.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000394349.9	CAGE supported TSS
ENST00000394349.9	MANE_select
ENST00000394349.9	upstream ATG
ENST00000338662.6	upstream ATG
ENST00000549748.2	CAGE supported TSS
ENST00000550804.6	MANE_select
ENST00000430117.6	QC splicing correct
ENST00000547949.6	NMD likely if extended
ENST00000547949.6	QC splicing correct
ENST00000663306.1	Assembled from SLRseq reads (SRP049776)
ENST00000654713.1	Assembled from SLRseq reads (SRP049776)
ENST00000656247.1	Assembled from SLRseq reads (SRP049776)
ENST00000663667.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669269.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000570015.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000566418.1	QC splicing correct
ENST00000243056.5	MANE_select
ENST00000243103.4	MANE_select
ENST00000546378.1	MANE_select
ENST00000303460.5	MANE_select
ENST00000504315.1	alternative 5' UTR
ENST00000509328.1	alternative 5' UTR
ENST00000243108.5	MANE_select
ENST00000508190.1	alternative 5' UTR
ENST00000303450.5	MANE_select
ENST00000512427.5	QC splicing correct
ENST00000040584.6	MANE_select
ENST00000303406.4	alternative 5' UTR
ENST00000430889.3	MANE_select
ENST00000312492.3	MANE_select
ENST00000659052.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666027.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669366.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652824.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656116.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659851.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000508763.1	QC splicing correct
ENST00000508763.1	not best-in-genome evidence
ENST00000506595.5	alternative 5' UTR
ENST00000514685.5	alternative 5' UTR
ENST00000337581.7	alternative 5' UTR
ENST00000243112.9	alternative 5' UTR
ENST00000401977.6	alternative 5' UTR
ENST00000504338.5	alternative 5' UTR
ENST00000507904.5	alternative 5' UTR
ENST00000504797.1	alternative 5' UTR
ENST00000506169.5	alternative 5' UTR
ENST00000503306.5	alternative 5' UTR
ENST00000505597.1	QC splicing correct
ENST00000660808.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000551732.1	QC splicing correct
ENST00000209875.9	MANE_select
ENST00000550411.5	alternative 5' UTR
ENST00000552562.1	alternative 5' UTR
ENST00000553061.1	QC splicing correct
ENST00000677375.1	SLRseq_PASA_cluster_4973_align_id:3568690|asmbl_58855
ENST00000677375.1	intropolis_filtered
ENST00000677210.1	SLRseq_PASA_cluster_4973_align_id:3568694|asmbl_58859
ENST00000677385.1	SLRseq_PASA_cluster_4973_align_id:3568695|asmbl_58860
ENST00000677249.1	SLRseq_PASA_cluster_5153_align_id:1301019|asmbl_20922
ENST00000677249.1	intropolis_filtered
ENST00000678418.1	SLRseq_PASA_cluster_4973_align_id:3568691|asmbl_58856
ENST00000676725.1	SLRseq_PASA_cluster_4973_align_id:3568688|asmbl_58853
ENST00000550482.2	SLR-seq_TB0000032
ENST00000550482.2	alternative 3' UTR
ENST00000679101.1	Snaptron_GTEX
ENST00000679101.1	alternative 5' UTR
ENST00000679101.1	intropolis_filtered
ENST00000340913.11	MANE_select
ENST00000679228.1	SLRseq_PASA_cluster_5153_align_id:1301017|asmbl_20920
ENST00000547870.2	SLRseq_PASA_cluster_5153_align_id:1301024|asmbl_20927
ENST00000676794.1	Snaptron_GTEX
ENST00000678365.1	intropolis_filtered
ENST00000678690.1	Snaptron_GTEX
ENST00000678690.1	intropolis_filtered
ENST00000678919.1	intropolis_filtered
ENST00000677220.1	Snaptron_GTEX
ENST00000678077.1	SLRseq_PASA_cluster_4973_align_id:3568684|asmbl_58849
ENST00000676842.1	intropolis_filtered
ENST00000550994.2	intropolis_filtered
ENST00000679273.1	intropolis_filtered
ENST00000678448.1	intropolis_filtered
ENST00000677291.1	Snaptron_GTEX
ENST00000677291.1	intropolis_filtered
ENST00000677645.1	intropolis_filtered
ENST00000677636.1	Snaptron_GTEX
ENST00000677636.1	intropolis_filtered
ENST00000678347.1	intropolis_filtered
ENST00000678876.1	Snaptron_GTEX
ENST00000677945.1	Snaptron_GTEX
ENST00000678934.1	Snaptron_GTEX
ENST00000678597.1	intropolis_filtered
ENST00000678873.1	intropolis_filtered
ENST00000679319.1	intropolis_filtered
ENST00000677224.1	Snaptron_GTEX
ENST00000677224.1	intropolis_filtered
ENST00000677279.1	intropolis_filtered
ENST00000678513.1	intropolis_filtered
ENST00000676707.1	intropolis_filtered
ENST00000679063.1	intropolis_filtered
ENST00000678279.1	Snaptron_GTEX
ENST00000677539.1	Snaptron_GTEX
ENST00000677191.1	intropolis_filtered
ENST00000678456.1	intropolis_filtered
ENST00000676572.1	intropolis_filtered
ENST00000679344.1	intropolis_filtered
ENST00000678212.1	intropolis_filtered
ENST00000677778.1	intropolis_filtered
ENST00000677488.1	intropolis_filtered
ENST00000678947.1	intropolis_filtered
ENST00000676472.1	intropolis_filtered
ENST00000678611.1	intropolis_filtered
ENST00000676951.1	intropolis_filtered
ENST00000676853.1	intropolis_filtered
ENST00000678424.1	intropolis_filtered
ENST00000678581.1	intropolis_filtered
ENST00000678970.1	Ensembl_RNAseq_introns
ENST00000676886.1	intropolis_filtered
ENST00000678412.1	intropolis_filtered
ENST00000679079.1	Snaptron_GTEX
ENST00000677518.1	intropolis_filtered
ENST00000677847.1	Snaptron_GTEX
ENST00000679026.1	Snaptron_GTEX
ENST00000679026.1	intropolis_filtered
ENST00000677840.1	Snaptron_GTEX
ENST00000677840.1	intropolis_filtered
ENST00000678093.1	Snaptron_GTEX
ENST00000679251.1	Snaptron_GTEX
ENST00000679251.1	intropolis_filtered
ENST00000678199.1	intropolis_filtered
ENST00000676925.1	intropolis_filtered
ENST00000677832.1	intropolis_filtered
ENST00000677666.1	Snaptron_GTEX
ENST00000677666.1	alternative 3' UTR
ENST00000677666.1	intropolis_filtered
ENST00000677061.1	Snaptron_GTEX
ENST00000677061.1	alternative 3' UTR
ENST00000677061.1	intropolis_filtered
ENST00000677072.1	intropolis_filtered
ENST00000676661.1	intropolis_filtered
ENST00000678687.1	intropolis_filtered
ENST00000676528.1	intropolis_filtered
ENST00000676855.1	Snaptron_GTEX
ENST00000676855.1	intropolis_filtered
ENST00000678103.1	Snaptron_GTEX
ENST00000678900.1	Snaptron_GTEX
ENST00000678900.1	intropolis_filtered
ENST00000312156.8	alternative 5' UTR
ENST00000435572.7	MANE_select
ENST00000540264.2	alternative 5' UTR
ENST00000553070.5	alternative 5' UTR
ENST00000553198.1	not organism-supported
ENST00000552848.5	alternative 5' UTR
ENST00000552218.5	QC splicing correct
ENST00000262061.7	MANE_select
ENST00000267015.4	MANE_select
ENST00000551809.1	alternative 5' UTR
ENST00000394313.7	MANE_select
ENST00000546919.5	QC splicing correct
ENST00000293379.9	MANE_select
ENST00000552397.5	alternative 5' UTR
ENST00000305879.8	MANE_select
ENST00000293373.11	MANE_select
ENST00000552211.5	QC splicing correct
ENST00000243052.8	MANE_select
ENST00000547431.5	QC splicing correct
ENST00000257905.13	MANE_select
ENST00000547826.2	QC splicing correct
ENST00000257867.5	MANE_select
ENST00000293371.11	MANE_select
ENST00000308796.11	MANE_select
ENST00000449076.6	MANE_select
ENST00000532804.5	alternative 5' UTR
ENST00000316577.12	alternative 5' UTR
ENST00000531122.5	alternative 5' UTR
ENST00000526532.5	alternative 5' UTR
ENST00000533446.5	alternative 5' UTR
ENST00000524668.5	alternative 5' UTR
ENST00000533607.1	alternative 5' UTR
ENST00000242994.4	MANE_select
ENST00000641111.1	ENA ID EGAS00001001486
ENST00000641111.1	NCBI GEO ID GSE80249
ENST00000641329.1	ENA ID EGAS00001001486
ENST00000641329.1	MANE_select
ENST00000641329.1	NCBI GEO ID GSE80249
ENST00000641329.1	alternative 5' UTR
ENST00000641353.1	ENA ID EGAS00001001486
ENST00000641982.1	ENA ID EGAS00001001486
ENST00000326258.1	MANE_select
ENST00000358433.3	ENA ID EGAS00001001486
ENST00000358433.3	MANE_select
ENST00000642104.1	ENA ID EGAS00001001486
ENST00000642104.1	alternative 5' UTR
ENST00000641364.1	ENA ID EGAS00001001486
ENST00000641740.1	ENA ID EGAS00001001486
ENST00000641740.1	alternative 5' UTR
ENST00000641576.1	ENA ID EGAS00001001486
ENST00000641576.1	MANE_select
ENST00000641576.1	NCBI GEO ID GSE80249
ENST00000641678.1	NCBI GEO ID GSE80249
ENST00000641988.1	ENA ID EGAS00001001486
ENST00000641886.1	ENA ID EGAS00001001486
ENST00000641886.1	NCBI GEO ID GSE80249
ENST00000641469.1	NCBI GEO ID GSE80249
ENST00000641301.1	ENA ID EGAS00001001486
ENST00000328314.3	MANE_select
ENST00000641516.1	ENA ID EGAS00001001486
ENST00000641202.1	ENA ID EGAS00001001486
ENST00000641202.1	MANE_select
ENST00000641202.1	alternative 5' UTR
ENST00000327335.4	MANE_select
ENST00000548615.1	MANE_select
ENST00000641569.1	ENA ID EGAS00001001486
ENST00000641569.1	alternative 5' UTR
ENST00000641851.1	ENA ID EGAS00001001486
ENST00000641851.1	alternative 5' UTR
ENST00000641114.1	ENA ID EGAS00001001486
ENST00000641114.1	MANE_select
ENST00000641684.1	NCBI GEO ID GSE80249
ENST00000394252.4	MANE_select
ENST00000257879.11	MANE_select
ENST00000548925.5	downstream ATG
ENST00000548556.1	alternative 5' UTR
ENST00000552930.5	alternative 5' UTR
ENST00000257895.10	MANE_select
ENST00000548082.1	alternative 5' UTR
ENST00000257857.9	MANE_select
ENST00000257857.9	alternative 5' UTR
ENST00000552067.5	non canonical TEC
ENST00000548160.5	alternative 5' UTR
ENST00000552692.5	alternative 5' UTR
ENST00000550050.5	QC splicing correct
ENST00000550050.5	non canonical TEC
ENST00000550776.5	alternative 5' UTR
ENST00000552164.5	alternative 5' UTR
ENST00000551173.5	alternative 5' UTR
ENST00000546457.1	alternative 5' UTR
ENST00000257868.10	MANE_select
ENST00000546799.1	alternative 3' UTR
ENST00000336133.8	MANE_select
ENST00000243045.10	MANE_select
ENST00000548974.1	alternative 5' UTR
ENST00000357606.7	alternative 5' UTR
ENST00000678005.2	align_id:3568842|asmbl_59007
ENST00000546957.2	align_id:3568843|asmbl_59008
ENST00000546957.2	alternative 5' UTR
ENST00000547445.2	align_id:3568844|asmbl_59009
ENST00000547445.2	alternative 5' UTR
ENST00000322569.9	MANE_select
ENST00000408946.7	MANE_select
ENST00000398213.4	CAGE supported TSS
ENST00000302533.6	CAGE supported TSS
ENST00000549939.1	QC splicing correct
ENST00000546878.5	alternative 5' UTR
ENST00000547015.5	alternative 5' UTR
ENST00000555090.5	alternative 5' UTR
ENST00000331886.10	MANE_select
ENST00000549368.5	alternative 5' UTR
ENST00000555025.5	alternative 5' UTR
ENST00000551156.5	alternative 5' UTR
ENST00000553783.5	alternative 5' UTR
ENST00000557080.5	alternative 5' UTR
ENST00000432422.7	alternative 5' UTR
ENST00000556001.5	alternative 5' UTR
ENST00000551707.5	alternative 5' UTR
ENST00000552478.5	QC splicing correct
ENST00000549079.6	QC splicing correct
ENST00000551739.5	QC splicing correct
ENST00000554434.6	QC splicing correct
ENST00000548747.6	MANE_select
ENST00000552882.5	alternative 5' UTR
ENST00000548493.5	alternative 5' UTR
ENST00000549564.1	QC splicing correct
ENST00000549418.5	alternative 5' UTR
ENST00000549233.2	QC splicing correct
ENST00000266970.9	MANE_select
ENST00000555357.1	not organism-supported
ENST00000354056.4	NP_439892
ENST00000554545.1	not organism-supported
ENST00000553116.5	alternative 5' UTR
ENST00000360299.10	MANE_select
ENST00000548068.5	alternative 5' UTR
ENST00000551459.5	alternative 5' UTR
ENST00000356124.8	alternative 5' UTR
ENST00000266971.8	MANE_select
ENST00000266971.8	alternative 5' UTR
ENST00000394115.6	alternative 5' UTR
ENST00000547586.5	alternative 5' UTR
ENST00000548274.5	alternative 5' UTR
ENST00000546833.5	alternative 5' UTR
ENST00000550065.1	not organism-supported
ENST00000552689.1	alternative 5' UTR
ENST00000547167.6	MANE_select
ENST00000547167.6	alternative 5' UTR
ENST00000552361.1	QC splicing correct
ENST00000552361.1	alternative 5' UTR
ENST00000646449.2	CAGE supported TSS
ENST00000646449.2	LR annotation
ENST00000646449.2	MANE_select
ENST00000646449.2	alternative 5' UTR
ENST00000549282.5	alternative 5' UTR
ENST00000267101.8	MANE_select
ENST00000550070.6	QC splicing correct
ENST00000548861.2	QC splicing correct
ENST00000303305.11	MANE_select
ENST00000548595.1	QC splicing correct
ENST00000501597.3	NP_066927.1
ENST00000546591.6	MANE_select
ENST00000546591.6	alternative 5' UTR
ENST00000394048.10	MANE_select
ENST00000552345.1	alternative 5' UTR
ENST00000257940.7	MANE_select
ENST00000551880.1	alternative 5' UTR
ENST00000546903.1	alternative 5' UTR
ENST00000550840.1	QC splicing correct
ENST00000553066.5	alternative 5' UTR
ENST00000551834.5	alternative 5' UTR
ENST00000548580.5	NAGNAG splice site
ENST00000293422.9	NAGNAG splice site
ENST00000348108.8	NAGNAG splice site
ENST00000550697.6	MANE_select
ENST00000550697.6	NAGNAG splice site
ENST00000547649.5	NAGNAG splice site
ENST00000547408.5	NAGNAG splice site
ENST00000551589.5	NAGNAG splice site
ENST00000549392.5	NAGNAG splice site
ENST00000548400.5	NAGNAG splice site
ENST00000548293.5	NAGNAG splice site
ENST00000548293.5	alternative 3' UTR
ENST00000550164.6	MANE_select
ENST00000394023.7	NP_001123892
ENST00000345093.9	MANE_select
ENST00000394013.6	NP_919339
ENST00000552656.5	alternative 5' UTR
ENST00000551711.5	QC splicing correct
ENST00000551711.5	alternative 5' UTR
ENST00000552244.5	alternative 5' UTR
ENST00000549038.5	alternative 5' UTR
ENST00000548225.1	QC splicing correct
ENST00000447747.5	alternative 5' UTR
ENST00000399713.6	alternative 5' UTR
ENST00000267023.9	MANE_select
ENST00000380198.6	alternative 5' UTR
ENST00000341463.5	alternative 5' UTR
ENST00000424625.5	alternative 5' UTR
ENST00000419753.5	alternative 5' UTR
ENST00000454355.7	MANE_select
ENST00000454355.7	NP_001128667
ENST00000266980.8	alternative 5' UTR
ENST00000437277.1	alternative 5' UTR
ENST00000447080.1	QC splicing correct
ENST00000267116.8	MANE_select
ENST00000308197.10	MANE_select
ENST00000433805.6	NP_001092807
ENST00000551814.1	alternative 3' UTR
ENST00000351328.8	MANE_select
ENST00000548746.5	QC splicing correct
ENST00000550734.5	alternative 5' UTR
ENST00000551253.5	alternative 5' UTR
ENST00000550655.5	alternative 5' UTR
ENST00000549565.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660360.1	Assembled from SLRseq reads (SRP049776)
ENST00000273308.9	MANE_select
ENST00000551475.5	alternative 5' UTR
ENST00000551359.5	QC splicing correct
ENST00000425394.7	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000425394.7	alternative 5' UTR
ENST00000548043.5	QC splicing correct
ENST00000228534.6	MANE_select
ENST00000314128.9	CAGE supported TSS
ENST00000314128.9	LR annotation
ENST00000314128.9	MANE_select
ENST00000556140.6	HsBN_lib6:Read_164148-Barcode%3DBC308:length%3D4417
ENST00000557417.5	non canonical TEC
ENST00000398189.4	MANE_select
ENST00000553532.6	MANE_select
ENST00000652304.1	CAGE supported TSS
ENST00000652304.1	LR annotation
ENST00000652304.1	MANE_select
ENST00000338146.7	MANE_select
ENST00000311966.9	MANE_select
ENST00000262031.10	MANE_select
ENST00000552247.6	QC splicing correct
ENST00000549945.5	QC splicing correct
ENST00000549884.6	MANE_select
ENST00000546695.5	alternative 5' UTR
ENST00000549506.5	alternative 5' UTR
ENST00000262030.8	MANE_select
ENST00000262030.8	genebuild_only_MANE
ENST00000547808.5	non canonical TEC
ENST00000547250.5	non canonical other
ENST00000548647.1	non canonical TEC
ENST00000262033.11	MANE_select
ENST00000456859.2	non canonical TEC
ENST00000678066.1	upstream ATG
ENST00000678416.1	overlapping uORF
ENST00000546862.6	alternative 5' UTR
ENST00000679092.1	alternative 5' UTR
ENST00000454682.6	MANE_select
ENST00000678376.1	alternative 5' UTR
ENST00000678376.1	overlapping uORF
ENST00000552540.5	alternative 5' UTR
ENST00000393891.8	alternative 5' UTR
ENST00000546392.6	alternative 5' UTR
ENST00000547914.5	non canonical TEC
ENST00000549259.5	alternative 5' UTR
ENST00000549855.5	QC splicing correct
ENST00000338193.11	MANE_select
ENST00000555159.5	alternative 5' UTR
ENST00000555805.5	alternative 5' UTR
ENST00000554643.5	alternative 5' UTR
ENST00000556650.5	alternative 5' UTR
ENST00000554150.5	alternative 5' UTR
ENST00000554155.1	alternative 5' UTR
ENST00000322165.1	MANE_select
ENST00000322165.1	alternative 5' UTR
ENST00000293502.2	MANE_select
ENST00000398138.5	MANE_select
ENST00000670536.1	Assembled from SLRseq reads (SRP049776)
ENST00000300098.3	MANE_select
ENST00000300101.3	MANE_select
ENST00000458521.7	MANE_select
ENST00000379411.6	QC splicing correct
ENST00000379411.6	non canonical conserved
ENST00000393867.5	QC splicing correct
ENST00000393867.5	non canonical conserved
ENST00000300108.7	QC splicing correct
ENST00000300108.7	non canonical conserved
ENST00000415231.1	alternative 5' UTR
ENST00000300119.8	MANE_select
ENST00000442789.6	alternative 5' UTR
ENST00000554234.5	QC splicing correct
ENST00000433964.5	alternative 5' UTR
ENST00000300128.9	MANE_select
ENST00000342556.6	not organism-supported
ENST00000300131.8	MANE_select
ENST00000554718.1	NAGNAG splice site
ENST00000300134.8	CAGE supported TSS
ENST00000300134.8	LR annotation
ENST00000300134.8	MANE_select
ENST00000543873.6	alternative 5' UTR
ENST00000556155.5	alternative 5' UTR
ENST00000454075.7	alternative 5' UTR
ENST00000640254.2	alternative 5' UTR
ENST00000555318.1	NAGNAG splice site
ENST00000555849.5	alternative 5' UTR
ENST00000553499.5	alternative 5' UTR
ENST00000553397.5	alternative 5' UTR
ENST00000554663.5	alternative 5' UTR
ENST00000557635.5	alternative 5' UTR
ENST00000553275.1	alternative 5' UTR
ENST00000243077.8	MANE_select
ENST00000243077.8	QC splicing correct
ENST00000349394.6	MANE_select
ENST00000328923.8	MANE_select
ENST00000332782.7	MANE_select
ENST00000553489.1	alternative 5' UTR
ENST00000547262.1	not organism-supported
ENST00000448732.1	alternative 5' UTR
ENST00000309668.3	MANE_select
ENST00000266646.3	MANE_select
ENST00000656936.1	Assembled from SLRseq reads (SRP049776)
ENST00000228682.7	MANE_select
ENST00000532291.5	NP_001153517.1
ENST00000528432.1	alternative 5' UTR
ENST00000528467.1	NP_001161081.1
ENST00000393797.7	upstream ATG
ENST00000550288.6	QC splicing correct
ENST00000550288.6	upstream ATG
ENST00000393791.8	MANE_select
ENST00000550130.1	QC splicing correct
ENST00000262027.10	MANE_select
ENST00000548887.5	alternative 5' UTR
ENST00000546805.5	alternative 5' UTR
ENST00000355673.8	MANE_select
ENST00000546632.1	alternative 5' UTR
ENST00000552255.5	alternative 5' UTR
ENST00000548550.1	NAGNAG splice site
ENST00000552163.1	NAGNAG splice site
ENST00000551142.2	align_id:3569882|asmbl_60047
ENST00000679307.1	long_read_pipeline_2
ENST00000676646.1	QC splicing correct
ENST00000676646.1	long_read_pipeline_2
ENST00000548249.6	MANE_select
ENST00000550988.6	align_id:3569892|asmbl_60057
ENST00000678505.1	long_read_pipeline_2
ENST00000676956.1	align_id:3569902|asmbl_60067
ENST00000552390.6	long_read_pipeline_2
ENST00000678653.1	upstream ATG
ENST00000543672.6	compmerge.7652.pooled.chr12
ENST00000434715.7	QC splicing correct
ENST00000551611.6	long_realign_id:1301361|asmbl_21264
ENST00000550750.2	align_id:1301359|asmbl_21262
ENST00000678990.1	align_id:3569903|asmbl_60068
ENST00000676250.1	CAGE supported TSS
ENST00000676250.1	intropolis_filtered
ENST00000674619.1	SLR-seq_TB0000033
ENST00000674619.1	Snaptron_GTEX
ENST00000675023.1	Snaptron_GTEX
ENST00000675216.1	Snaptron_GTEX
ENST00000676359.1	intropolis_filtered
ENST00000455537.7	MANE_select
ENST00000676457.1	SLR-seq_HsBN_lib10
ENST00000676457.1	Snaptron_GTEX
ENST00000676081.1	SLR-seq_HsBN_lib12
ENST00000675882.1	SLR-seq_HsBN_lib8
ENST00000674653.1	Snaptron_GTEX
ENST00000674653.1	intropolis_filtered
ENST00000675984.1	SLR-seq_TB0000034
ENST00000676242.1	Snaptron_GTEX
ENST00000676242.1	intropolis_filtered
ENST00000676352.1	Snaptron_GTEX
ENST00000675929.1	SLR-seq_HsBN_lib12
ENST00000675929.1	SLR-seq_TB0000034
ENST00000675629.1	Snaptron_GTEX
ENST00000675629.1	intropolis_filtered
ENST00000675299.1	Snaptron_GTEX
ENST00000675907.1	Snaptron_GTEX
ENST00000674776.1	Snaptron_GTEX
ENST00000674776.1	intropolis_filtered
ENST00000675634.1	Snaptron_GTEX
ENST00000675634.1	intropolis_filtered
ENST00000675737.1	SLR-seq_HsBN_lib8
ENST00000676055.1	Snaptron_GTEX
ENST00000675697.1	intropolis_filtered
ENST00000676437.1	SLR-seq_HsBN_lib10
ENST00000675201.1	NMD likely if extended
ENST00000675201.1	Snaptron_GTEX
ENST00000675201.1	intropolis_filtered
ENST00000676265.1	NMD likely if extended
ENST00000676265.1	Snaptron_GTEX
ENST00000676265.1	intropolis_filtered
ENST00000675866.1	Snaptron_GTEX
ENST00000674858.1	Snaptron_GTEX
ENST00000674858.1	alternative 3' UTR
ENST00000675433.1	Snaptron_GTEX
ENST00000675433.1	alternative 3' UTR
ENST00000674980.1	Snaptron_GTEX
ENST00000674980.1	alternative 3' UTR
ENST00000354947.10	MANE_select
ENST00000551835.5	alternative 5' UTR
ENST00000337737.8	MANE_select
ENST00000337737.8	alternative 5' UTR
ENST00000548198.5	alternative 5' UTR
ENST00000333972.11	NP_001104740
ENST00000286494.9	MANE_select
ENST00000356672.3	QC splicing correct
ENST00000610219.1	454 RNA-Seq supported
ENST00000341156.9	MANE_select
ENST00000552798.5	QC splicing correct
ENST00000548888.5	alternative 5' UTR
ENST00000551220.1	alternative 5' UTR
ENST00000315970.12	MANE_select
ENST00000551035.5	NAGNAG splice site
ENST00000257966.12	NAGNAG splice site
ENST00000435406.6	QC splicing correct
ENST00000257910.8	MANE_select
ENST00000257904.11	MANE_select
ENST00000551888.5	NMD likely if extended
ENST00000550419.5	QC splicing correct
ENST00000551800.5	QC splicing correct
ENST00000552254.5	alternative 5' UTR
ENST00000552388.1	alternative 5' UTR
ENST00000552862.1	alternative 5' UTR
ENST00000547853.1	alternative 5' UTR
ENST00000266643.6	MANE_select
ENST00000228606.9	MANE_select
ENST00000324871.12	MANE_select
ENST00000324871.12	upstream ATG
ENST00000300209.13	MANE_select
ENST00000652027.2	CAGE supported TSS
ENST00000652027.2	LR annotation
ENST00000652027.2	MANE_select
ENST00000549994.1	alternative 5' UTR
ENST00000398073.7	MANE_select
ENST00000661247.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000661970.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664926.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664759.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656548.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667373.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659761.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661434.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667552.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647763.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000300145.4	MANE_select
ENST00000549257.5	QC splicing correct
ENST00000659090.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659090.1	Assembled from SLRseq reads (SRP049776)
ENST00000656617.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655884.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653595.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668073.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000668073.1	Assembled from SLRseq reads (SRP049776)
ENST00000664635.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667438.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000546580.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655210.1	Assembled from SLRseq reads (SRP049776)
ENST00000660297.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000648243.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000654861.1	Assembled from RACEseq reads
ENST00000668012.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670826.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000320743.8	MANE_select
ENST00000657355.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661804.1	Assembled from SLRseq reads (SRP049776)
ENST00000547379.6	MANE_select
ENST00000547379.6	alternative 5' UTR
ENST00000552432.5	alternative 5' UTR
ENST00000552024.5	alternative 5' UTR
ENST00000548610.5	alternative 5' UTR
ENST00000663023.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000668912.1	Assembled from SLRseq reads (SRP049776)
ENST00000551619.5	alternative 5' UTR
ENST00000549379.5	alternative 5' UTR
ENST00000280377.10	MANE_select
ENST00000393630.8	MANE_select
ENST00000393630.8	NP_055841.2
ENST00000549286.1	QC splicing correct
ENST00000550290.2	CAGE supported TSS
ENST00000619323.1	CAGE supported TSS
ENST00000228705.7	MANE_select
ENST00000299178.4	MANE_select
ENST00000324472.9	MANE_select
ENST00000542209.1	alternative 5' UTR
ENST00000509615.2	QC splicing correct
ENST00000541353.2	NMD likely if extended
ENST00000541353.2	QC splicing correct
ENST00000261234.11	MANE_select
ENST00000649287.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000355086.8	MANE_select
ENST00000658485.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000536455.1	QC splicing correct
ENST00000398055.8	MANE_select
ENST00000543942.7	MANE_select
ENST00000543942.7	QC splicing correct
ENST00000332707.10	MANE_select
ENST00000540203.5	alternative 5' UTR
ENST00000400935.2	alternative 5' UTR
ENST00000676654.1	SLRseq_align_id:3570461|asmbl_60626_PASA_cluster_5102
ENST00000677641.1	SLRseq_align_id:3570465|asmbl_60630_PASA_cluster_5102
ENST00000677641.1	Snaptron_GTEX
ENST00000677641.1	intropolis_filtered
ENST00000677499.1	SLRseq_align_id:3570471|asmbl_60636_PASA_cluster_5102
ENST00000676684.1	SLRseq_align_id:3570464|asmbl_60629_PASA_cluster_5102
ENST00000676809.1	pacbio_align_id:1301487|asmbl_21390_PASA_cluster_5275
ENST00000650790.1	alternative 5' UTR
ENST00000676912.1	SLRseq_align_id:3570460|asmbl_60625_PASA_cluster_5102
ENST00000676912.1	Snaptron_GTEX
ENST00000676912.1	alternative 5' UTR
ENST00000676912.1	intropolis_filtered
ENST00000677686.1	SLRseq_align_id:3570477|asmbl_60642_PASA_cluster_5102
ENST00000677545.1	alternative 5' UTR
ENST00000677545.1	intropolis_filtered
ENST00000678430.1	pacbio_align_id:1301488|asmbl_21391_PASA_cluster_5275
ENST00000676551.1	SLRseq_align_id:3570481|asmbl_60646_PASA_cluster_5102
ENST00000677632.1	SLRseq_align_id:3570470|asmbl_60635_PASA_cluster_5102
ENST00000677632.1	Snaptron_GTEX
ENST00000677632.1	intropolis_filtered
ENST00000331710.10	CAGE supported TSS
ENST00000331710.10	LR annotation
ENST00000331710.10	MANE_select
ENST00000678180.1	SLRseq_align_id:3570460|asmbl_60625_PASA_cluster_5102
ENST00000678180.1	Snaptron_GTEX
ENST00000678180.1	intropolis_filtered
ENST00000679065.1	pacbio_align_id:1301489|asmbl_21392_PASA_cluster_5275
ENST00000676930.1	SLRseq_align_id:3570475|asmbl_60640_PASA_cluster_5102
ENST00000676930.1	intropolis_filtered
ENST00000677831.1	SLRseq_align_id:3570460|asmbl_60625_PASA_cluster_5102
ENST00000651014.1	alternative 5' UTR
ENST00000677549.1	SLRseq_align_id:3570486|asmbl_60651_PASA_cluster_5102
ENST00000538890.5	alternative 5' UTR
ENST00000540417.1	alternative 5' UTR
ENST00000678368.1	Snaptron_GTEX
ENST00000678368.1	alternative 5' UTR
ENST00000676469.1	Snaptron_GTEX
ENST00000676469.1	intropolis_filtered
ENST00000678197.1	pacbio_align_id:1301486|asmbl_21389_PASA_cluster_5275
ENST00000679050.1	intropolis_filtered
ENST00000676901.1	Snaptron_GTEX
ENST00000676901.1	intropolis_filtered
ENST00000678079.1	Snaptron_GTEX
ENST00000678079.1	intropolis_filtered
ENST00000677759.1	Snaptron_GTEX
ENST00000677759.1	intropolis_filtered
ENST00000679302.1	Snaptron_GTEX
ENST00000679302.1	intropolis_filtered
ENST00000678808.1	Snaptron_GTEX
ENST00000678808.1	intropolis_filtered
ENST00000677112.1	Snaptron_GTEX
ENST00000677112.1	intropolis_filtered
ENST00000678738.1	Snaptron_GTEX
ENST00000678738.1	intropolis_filtered
ENST00000677016.1	Snaptron_GTEX
ENST00000677016.1	intropolis_filtered
ENST00000677973.1	Snaptron_GTEX
ENST00000677973.1	intropolis_filtered
ENST00000677242.1	Snaptron_GTEX
ENST00000677242.1	intropolis_filtered
ENST00000678718.1	Snaptron_GTEX
ENST00000678718.1	intropolis_filtered
ENST00000676983.1	Snaptron_GTEX
ENST00000676983.1	intropolis_filtered
ENST00000677670.1	Snaptron_GTEX
ENST00000677670.1	intropolis_filtered
ENST00000678235.1	Snaptron_GTEX
ENST00000678235.1	intropolis_filtered
ENST00000545025.2	Snaptron_GTEX
ENST00000545025.2	intropolis_filtered
ENST00000677858.1	Snaptron_GTEX
ENST00000677858.1	intropolis_filtered
ENST00000676490.1	Snaptron_GTEX
ENST00000676490.1	intropolis_filtered
ENST00000676539.1	Snaptron_GTEX
ENST00000676539.1	intropolis_filtered
ENST00000676774.1	SLRseq_align_id:3570488|asmbl_60653_PASA_cluster_5102
ENST00000678582.1	Snaptron_GTEX
ENST00000678582.1	intropolis_filtered
ENST00000679010.1	pacbio_align_id:1301490|asmbl_21393_PASA_cluster_5275
ENST00000677435.1	Snaptron_GTEX
ENST00000677435.1	intropolis_filtered
ENST00000678567.1	Snaptron_GTEX
ENST00000678567.1	intropolis_filtered
ENST00000676587.1	Snaptron_GTEX
ENST00000676587.1	intropolis_filtered
ENST00000677714.1	Snaptron_GTEX
ENST00000677714.1	intropolis_filtered
ENST00000541805.2	SLR-seq_HsBN_lib12
ENST00000545392.2	SLRseq_align_id:3570482|asmbl_60647_PASA_cluster_5102
ENST00000678996.1	Snaptron_GTEX
ENST00000678996.1	intropolis_filtered
ENST00000676521.1	Snaptron_GTEX
ENST00000676521.1	intropolis_filtered
ENST00000678125.1	Snaptron_GTEX
ENST00000678125.1	intropolis_filtered
ENST00000676593.1	Snaptron_GTEX
ENST00000676593.1	intropolis_filtered
ENST00000677313.1	Snaptron_GTEX
ENST00000677313.1	intropolis_filtered
ENST00000678992.1	Snaptron_GTEX
ENST00000677093.1	CAGE supported TSS
ENST00000677093.1	Snaptron_GTEX
ENST00000677093.1	intropolis_filtered
ENST00000542104.6	MANE_select
ENST00000540088.1	QC splicing correct
ENST00000545821.1	QC splicing correct
ENST00000258145.8	MANE_select
ENST00000434563.3	QC splicing correct
ENST00000542120.6	CAGE supported TSS
ENST00000539867.6	MANE_select
ENST00000539120.1	alternative 5' UTR
ENST00000665042.1	Assembled from SLRseq reads (SRP049776)
ENST00000661071.1	Assembled from SLRseq reads (SRP049776)
ENST00000655129.1	Assembled from SLRseq reads (SRP049776)
ENST00000662789.1	Assembled from SLRseq reads (SRP049776)
ENST00000667999.1	Assembled from SLRseq reads (SRP049776)
ENST00000653818.1	Assembled from SLRseq reads (SRP049776)
ENST00000665647.1	Assembled from SLRseq reads (SRP049776)
ENST00000671328.1	Assembled from SLRseq reads (SRP049776)
ENST00000649369.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000653132.1	Assembled from SLRseq reads (SRP049776)
ENST00000661511.1	Assembled from SLRseq reads (SRP049776)
ENST00000654555.1	Assembled from RACEseq reads
ENST00000653464.1	Assembled from SLRseq reads (SRP049776)
ENST00000286574.9	MANE_select
ENST00000308330.3	MANE_select
ENST00000308259.10	MANE_select
ENST00000535664.5	alternative 5' UTR
ENST00000538045.5	alternative 5' UTR
ENST00000642411.1	alternative 5' UTR
ENST00000535239.5	alternative 5' UTR
ENST00000646299.1	alternative 5' UTR
ENST00000642404.1	alternative 5' UTR
ENST00000545709.1	QC splicing correct
ENST00000538294.1	QC splicing correct
ENST00000668827.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000545750.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000545750.2	QC splicing correct
ENST00000657815.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670328.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662138.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000354636.7	NP_003475
ENST00000403681.7	MANE_select
ENST00000266604.7	MANE_select
ENST00000446587.2	alternative 5' UTR
ENST00000358230.8	MANE_select
ENST00000261233.9	MANE_select
ENST00000457197.2	NP_001135995
ENST00000247815.9	MANE_select
ENST00000398016.7	NP_066973
ENST00000359742.9	CAGE supported TSS
ENST00000359742.9	MANE_select
ENST00000542021.1	QC splicing correct
ENST00000543172.5	NAGNAG splice site
ENST00000542309.5	alternative 5' UTR
ENST00000539540.5	alternative 5' UTR
ENST00000541947.1	downstream ATG
ENST00000538373.1	alternative 5' UTR
ENST00000652412.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000535917.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000538008.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661528.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659421.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000545606.6	MANE_select
ENST00000658010.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000650195.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000543747.1	alternative 5' UTR
ENST00000344096.4	MANE_select
ENST00000319833.6	alternative 5' UTR
ENST00000229135.4	MANE_select
ENST00000229134.5	MANE_select
ENST00000538666.6	CAGE supported TSS
ENST00000538666.6	LR annotation
ENST00000538666.6	MANE_select
ENST00000328087.6	alternative 5' UTR
ENST00000653144.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000441255.7	Assembled from SLRseq reads (SRP049776)
ENST00000393436.9	alternative 5' UTR
ENST00000250559.14	MANE_select
ENST00000489473.6	alternative 5' UTR
ENST00000422358.6	NAGNAG splice site
ENST00000422358.6	alternative 5' UTR
ENST00000541167.5	alternative 5' UTR
ENST00000538283.5	alternative 5' UTR
ENST00000341355.9	NAGNAG splice site
ENST00000341355.9	alternative 5' UTR
ENST00000537460.5	QC splicing correct
ENST00000537460.5	alternative 5' UTR
ENST00000463493.5	non canonical TEC
ENST00000545270.5	alternative 5' UTR
ENST00000542018.5	alternative 5' UTR
ENST00000534899.5	NAGNAG splice site
ENST00000534899.5	alternative 5' UTR
ENST00000453560.6	NAGNAG splice site
ENST00000453560.6	alternative 5' UTR
ENST00000540781.5	alternative 5' UTR
ENST00000535492.5	NAGNAG splice site
ENST00000535492.5	alternative 5' UTR
ENST00000485252.6	alternative 5' UTR
ENST00000541386.5	alternative 5' UTR
ENST00000538877.5	alternative 5' UTR
ENST00000545720.6	QC splicing correct
ENST00000545720.6	alternative 5' UTR
ENST00000500695.2	QC splicing correct
ENST00000229179.9	MANE_select
ENST00000401003.3	QC splicing correct
ENST00000398004.4	MANE_select
ENST00000258149.10	LR annotation
ENST00000258149.10	downstream ATG
ENST00000258148.11	downstream ATG
ENST00000481186.6	QC splicing correct
ENST00000546048.5	QC splicing correct
ENST00000544710.1	QC splicing correct
ENST00000551568.6	MANE_select
ENST00000546373.5	alternative 5' UTR
ENST00000548954.5	alternative 5' UTR
ENST00000547924.1	NAGNAG splice site
ENST00000548262.5	alternative 5' UTR
ENST00000549781.1	NAGNAG splice site
ENST00000650080.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000435070.7	MANE_select
ENST00000456847.7	QC splicing correct
ENST00000650046.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000261267.7	MANE_select
ENST00000247843.7	MANE_select
ENST00000547219.5	alternative 5' UTR
ENST00000550316.5	QC splicing correct
ENST00000550316.5	alternative 5' UTR
ENST00000548154.5	alternative 5' UTR
ENST00000549921.6	MANE_select
ENST00000549921.6	alternative 5' UTR
ENST00000550937.5	alternative 5' UTR
ENST00000549092.5	alternative 5' UTR
ENST00000550169.5	alternative 5' UTR
ENST00000551325.1	alternative 5' UTR
ENST00000299300.11	MANE_select
ENST00000550010.5	Genoscope mRNA only
ENST00000361484.5	MANE_select
ENST00000547208.5	NAGNAG splice site
ENST00000488961.5	NP_689652.2
ENST00000330891.10	MANE_select
ENST00000551160.5	alternative 5' UTR
ENST00000501387.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661191.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000247833.12	MANE_select
ENST00000549760.1	alternative 5' UTR
ENST00000553099.5	alternative 5' UTR
ENST00000552032.7	MANE_select
ENST00000547771.6	QC splicing correct
ENST00000549419.6	Assembled from SLRseq reads (SRP049776)
ENST00000668518.1	Assembled from SLRseq reads (SRP049776)
ENST00000552998.2	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000656495.1	Assembled from SLRseq reads (SRP049776)
ENST00000670041.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664048.1	Assembled from SLRseq reads (SRP049776)
ENST00000547780.5	QC splicing correct
ENST00000547780.5	alternative 5' UTR
ENST00000550641.6	alternative 5' UTR
ENST00000229195.8	MANE_select
ENST00000229195.8	alternative 5' UTR
ENST00000552483.5	QC splicing correct
ENST00000549750.5	alternative 5' UTR
ENST00000551043.5	alternative 5' UTR
ENST00000547867.5	alternative 5' UTR
ENST00000549947.1	QC splicing correct
ENST00000258111.5	MANE_select
ENST00000667427.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000667308.1	Assembled from SLRseq reads (SRP049776)
ENST00000334414.11	MANE_select
ENST00000551525.5	NAGNAG splice site
ENST00000440835.6	alternative 5' UTR
ENST00000283228.7	MANE_select
ENST00000549308.5	upstream ATG
ENST00000550661.1	alternative 5' UTR
ENST00000549357.1	QC splicing correct
ENST00000247829.8	MANE_select
ENST00000247829.8	alternative 5' UTR
ENST00000546561.2	alternative 5' UTR
ENST00000266674.10	MANE_select
ENST00000378743.9	MANE_select
ENST00000308086.3	MANE_select
ENST00000551238.1	alternative 5' UTR
ENST00000266673.10	MANE_select
ENST00000550524.5	alternative 5' UTR
ENST00000550787.1	alternative 3' UTR
ENST00000261263.5	MANE_select
ENST00000482439.6	alternative 5' UTR
ENST00000485960.7	MANE_select
ENST00000333850.4	MANE_select
ENST00000546576.1	QC splicing correct
ENST00000550403.5	QC splicing correct
ENST00000667465.1	Assembled from SLRseq reads (SRP049776)
ENST00000663992.1	Assembled from SLRseq reads (SRP049776)
ENST00000663541.1	Assembled from SLRseq reads (SRP049776)
ENST00000663541.1	FLJ37837
ENST00000663575.1	Assembled from SLRseq reads (SRP049776)
ENST00000435350.2	Assembled from SLRseq reads (SRP049776)
ENST00000659498.1	Assembled from SLRseq reads (SRP049776)
ENST00000662127.1	Assembled from SLRseq reads (SRP049776)
ENST00000655350.1	Assembled from SLRseq reads (SRP049776)
ENST00000653894.1	Assembled from SLRseq reads (SRP049776)
ENST00000668786.1	Assembled from SLRseq reads (SRP049776)
ENST00000426250.4	Assembled from SLRseq reads (SRP049776)
ENST00000668395.1	Assembled from SLRseq reads (SRP049776)
ENST00000671462.1	Assembled from SLRseq reads (SRP049776)
ENST00000667301.1	Assembled from SLRseq reads (SRP049776)
ENST00000667144.1	Assembled from SLRseq reads (SRP049776)
ENST00000663532.1	Assembled from SLRseq reads (SRP049776)
ENST00000658779.1	Assembled from SLRseq reads (SRP049776)
ENST00000663912.1	Assembled from SLRseq reads (SRP049776)
ENST00000661366.1	Assembled from SLRseq reads (SRP049776)
ENST00000550334.2	Assembled from SLRseq reads (SRP049776)
ENST00000656147.1	Assembled from SLRseq reads (SRP049776)
ENST00000655489.1	Assembled from SLRseq reads (SRP049776)
ENST00000665830.1	Assembled from SLRseq reads (SRP049776)
ENST00000664550.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000551387.1	QC splicing correct
ENST00000663261.1	Assembled from SLRseq reads (SRP049776)
ENST00000665907.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669556.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653134.1	Assembled from SLRseq reads (SRP049776)
ENST00000662107.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000515416.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658833.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670573.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000551726.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656876.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668228.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665895.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668997.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658677.1	Assembled from SLRseq reads (SRP049776)
ENST00000670471.1	Assembled from SLRseq reads (SRP049776)
ENST00000668665.1	Assembled from SLRseq reads (SRP049776)
ENST00000548427.1	TEC
ENST00000549140.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647598.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000519948.4	MANE_select
ENST00000519948.4	This is effectively a transcribed pseudogene. The CDS is very well conserved in mouse. Even the two polyA signals are conserved. The parent protein aligns with many frameshifts and in-frame stop codons 3' of this CDS
ENST00000549446.6	MANE_select
ENST00000647764.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000546456.1	QC splicing correct
ENST00000549953.1	QC splicing correct
ENST00000378695.9	MANE_select
ENST00000548623.1	CAGE supported TSS
ENST00000547144.1	CAGE supported TSS
ENST00000550916.6	MANE_select
ENST00000547164.1	confirm experimentally
ENST00000266659.8	MANE_select
ENST00000547326.2	QC splicing correct
ENST00000229214.9	MANE_select
ENST00000651075.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000602540.5	CAGE supported TSS
ENST00000618691.5	MANE_select
ENST00000552056.5	alternative 3' UTR
ENST00000393263.7	alternative 3' UTR
ENST00000552147.5	NAGNAG splice site
ENST00000542344.5	NAGNAG splice site
ENST00000547529.6	QC splicing correct
ENST00000551992.5	alternative 5' UTR
ENST00000548273.5	alternative 5' UTR
ENST00000551524.5	alternative 5' UTR
ENST00000553247.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000550380.6	Assembled from SLRseq reads (SRP049776)
ENST00000650064.2	LR annotation
ENST00000650064.2	MANE_select
ENST00000393249.6	NP_001003712
ENST00000261183.8	MANE_select
ENST00000393250.8	NAGNAG splice site
ENST00000393250.8	alternative 5' UTR
ENST00000547540.5	Putative until annotated as biotype NSD (Non-stop decay)
ENST00000553139.5	alternative 5' UTR
ENST00000549570.5	alternative 5' UTR
ENST00000551927.5	alternative 5' UTR
ENST00000547544.5	NAGNAG splice site
ENST00000547544.5	alternative 5' UTR
ENST00000670736.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426126.7	MANE_select
ENST00000426126.7	non canonical U12
ENST00000311083.10	MANE_select
ENST00000546966.5	alternative 5' UTR
ENST00000322886.12	MANE_select
ENST00000550669.5	temporarily annotated as putative cds until annotated as NSD (non-stop decay)
ENST00000547316.1	alternative 5' UTR
ENST00000667988.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000552060.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000397909.7	MANE_select
ENST00000549464.5	temporarily this is putative cds until annotated as NSD (non-stop decay)-gdr
ENST00000547725.1	QC splicing correct
ENST00000552736.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000552736.2	QC splicing correct
ENST00000654030.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662391.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658392.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660149.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671062.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669513.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656363.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000546563.1	QC splicing correct
ENST00000656800.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000393240.7	alternative 5' UTR
ENST00000261205.9	MANE_select
ENST00000457153.6	NAGNAG splice site
ENST00000552074.5	alternative 5' UTR
ENST00000547046.5	alternative 5' UTR
ENST00000549671.5	alternative 5' UTR
ENST00000551304.5	QC splicing correct
ENST00000551304.5	alternative 5' UTR
ENST00000552744.5	alternative 5' UTR
ENST00000552624.5	NAGNAG splice site
ENST00000552624.5	alternative 5' UTR
ENST00000446242.3	alternative 5' UTR
ENST00000328827.9	MANE_select
ENST00000549050.1	QC splicing correct
ENST00000548426.1	alternative 5' UTR
ENST00000552637.1	alternative 5' UTR
ENST00000450142.7	MANE_select
ENST00000546762.5	QC splicing correct
ENST00000634739.1	alternative 3' UTR
ENST00000546369.5	NP_001137358
ENST00000646859.1	CAGE supported TSS
ENST00000646859.1	upstream ATG
ENST00000547103.7	CAGE supported TSS
ENST00000547103.7	LR annotation
ENST00000551042.1	reevaluated feb092011: RP11-272K23.1 and RP11-272K23.2 and all their variants are part of the same gene; found no assembly gap, but the missing 3 exons (in between RP11-272K23.1 and RP11-272K23.2) were assembled in the reversed orientation; this might be an assembly error.  the 3 exons on the reversed strand is in gene fragment RP11-288D9.1-001 (gdr)
ENST00000526956.2	The last three exons may be misassembled
ENST00000526956.2	not organism-supported
ENST00000526956.2	reevaluated feb092011: RP11-272K23.1 and RP11-272K23.2 and all their variants are part of the same gene; found no assembly gap, but the missing 3 exons (in between RP11-272K23.1 and RP11-272K23.2) were assembled in the reversed orientation; this might be an assembly error.  the 3 exons on the reversed strand is in gene fragment RP11-288D9.1-001 (gdr)
ENST00000550634.1	QC splicing correct
ENST00000228641.4	MANE_select
ENST00000228644.4	MANE_select
ENST00000655211.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669331.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663278.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663278.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000653991.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653130.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658715.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668136.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656352.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664923.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000552864.6	MANE_select
ENST00000651903.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000548058.6	MANE_select
ENST00000653205.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000549396.6	MANE_select
ENST00000549396.6	QC splicing correct
ENST00000549325.5	QC splicing correct
ENST00000541570.6	QC splicing correct
ENST00000550359.6	QC splicing correct
ENST00000407050.8	QC splicing correct
ENST00000548586.5	QC splicing correct
ENST00000443686.7	QC splicing correct
ENST00000552948.5	QC splicing correct
ENST00000548670.1	alternative 5' UTR
ENST00000547623.5	alternative 5' UTR
ENST00000654866.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000666472.1	Assembled from SLRseq reads (SRP049776)
ENST00000652105.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000671127.1	Assembled from SLRseq reads (SRP049776)
ENST00000665004.1	Assembled from SLRseq reads (SRP049776)
ENST00000656478.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669351.1	Assembled from SLRseq reads (SRP049776)
ENST00000550506.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660121.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000552377.5	QC splicing correct
ENST00000256151.8	MANE_select
ENST00000248306.8	MANE_select
ENST00000548200.5	temporarily putative cds, until annotated as NSD (non-stop decay)-gdr
ENST00000550058.1	QC splicing correct
ENST00000552532.1	QC splicing correct
ENST00000548575.1	TEC
ENST00000651263.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000321196.8	MANE_select
ENST00000266682.10	MANE_select
ENST00000681939.1	slrseq_align_id:3571961|asmbl_62126_PASA_cluster_5207
ENST00000548267.2	slrseq_align_id:3571960|asmbl_62125_PASA_cluster_5207
ENST00000680963.1	alternative 5' UTR
ENST00000680963.1	slrseq_merged_align_id:3571940|asmbl_62105_PASA_cluster_5207
ENST00000680207.1	_PASA_cluster_5207
ENST00000680207.1	slrseq_align_align_id:3571951|asmbl_62116
ENST00000681418.1	slrseq_align_id:3571950|asmbl_62115_PASA_cluster_5207
ENST00000680892.1	slrseq_align_id:3571946|asmbl_62111_PASA_cluster_5207
ENST00000681953.1	slrseq_align_id:3571952|asmbl_62117_PASA_cluster_5207
ENST00000680780.1	slrseq_merged_align_id:3571948|asmbl_62113_PASA_cluster_5207
ENST00000679430.1	slrseq_align_align_id:3571953|asmbl_62118_PASA_cluster_5207
ENST00000681220.1	slrseq_align_id:3571956|asmbl_62121_PASA_cluster_5207
ENST00000680187.1	slrseq_align_id:3571959|asmbl_62124_PASA_cluster_5207
ENST00000680469.1	slrseq_align_id:3571944|asmbl_62109_PASA_cluster_5207
ENST00000679920.1	slrseq_align_id:3571945|asmbl_62110_PASA_cluster_5207
ENST00000681106.1	alternative 5' UTR
ENST00000681106.1	slrseq_align_id:3571938|asmbl_62103_PASA_cluster_5207
ENST00000681721.1	alternative 5' UTR
ENST00000681721.1	slrseq_align_id:3571937|asmbl_62102_PASA_cluster_5207
ENST00000679989.1	slrseq_align_id:3571949|asmbl_62114_PASA_cluster_5207
ENST00000309283.12	QC splicing correct
ENST00000680379.1	SLR-seq_HsBN_lib7
ENST00000679363.1	Snaptron_GTEX
ENST00000679363.1	intropolis_filtered
ENST00000679679.1	Snaptron_GTEX
ENST00000679956.1	slrseq_align_id:3571958|asmbl_62123_PASA_cluster_5207
ENST00000679414.1	slrseq_align_id:3571963|asmbl_62128_PASA_cluster_5207
ENST00000680676.1	slrseq_align_id:3571967|asmbl_62132_PASA_cluster_5207
ENST00000681453.1	Snaptron_GTEX
ENST00000679652.1	slrseq_align_id:3571962|asmbl_62127_PASA_cluster_5207
ENST00000679681.1	intropolis_filtered
ENST00000681688.1	alternative 5' UTR
ENST00000681688.1	slrseq_align_id:3571957|asmbl_62122_PASA_cluster_5207
ENST00000680714.1	SLR-seq_HsBN_lib7
ENST00000679453.1	slrseq_align_id:3571966|asmbl_62131_PASA_cluster_5207
ENST00000681281.1	slrseq_align_id:3571965|asmbl_62130_PASA_cluster_5207
ENST00000680901.1	intropolis_filtered
ENST00000681628.1	slrseq_align_id:3571964|asmbl_62129_PASA_cluster_5207
ENST00000679933.1	Snaptron_GTEX
ENST00000679933.1	alternative 5' UTR
ENST00000679933.1	intropolis_filtered
ENST00000680260.1	alternative 5' UTR
ENST00000680260.1	intropolis_filtered
ENST00000551010.2	alternative 5' UTR
ENST00000551010.2	intropolis_filtered
ENST00000549540.1	alternative 5' UTR
ENST00000680067.1	slrseq_align_id:3571971|asmbl_62136_PASA_cluster_5207
ENST00000681582.1	intropolis_filtered
ENST00000551612.6	intropolis_filtered
ENST00000532498.7	MANE_select
ENST00000547836.1	alternative 5' UTR
ENST00000393212.7	alternative 5' UTR
ENST00000393217.7	MANE_select
ENST00000528777.3	QC splicing correct
ENST00000316824.4	MANE_select
ENST00000361228.5	MANE_select
ENST00000256010.7	MANE_select
ENST00000620241.4	alternative 5' UTR
ENST00000621808.4	alternative 5' UTR
ENST00000552808.6	alternative 5' UTR
ENST00000547225.5	alternative 5' UTR
ENST00000602941.6	QC splicing correct
ENST00000602941.6	alternative 5' UTR
ENST00000298699.7	MANE_select
ENST00000551163.2	alternative 5' UTR
ENST00000549345.6	QC splicing correct
ENST00000356891.4	MANE_select
ENST00000453037.7	QC splicing correct
ENST00000674712.1	align_id:3572029|asmbl_62194
ENST00000671777.2	align_id:1302057|asmbl_21960
ENST00000671777.2	s
ENST00000674889.1	align_id:3572021|asmbl_62186
ENST00000676190.1	align_id:3572023|asmbl_62188
ENST00000675894.1	align_id:3572005|asmbl_62170
ENST00000676181.1	align_id:3572014|asmbl_62179
ENST00000676363.1	align_id:3572003|asmbl_62168
ENST00000552810.6	MANE_select
ENST00000674971.1	align_id:3572006|asmbl_62171
ENST00000672414.2	align_id:3572011|asmbl_62176
ENST00000673058.2	align_id:3572009|asmbl_62174
ENST00000675794.1	align_id:3572004|asmbl_62169
ENST00000676074.1	align_id:3572010|asmbl_62175
ENST00000675408.1	align_id:3572008|asmbl_62173
ENST00000675230.1	align_id:3572002|asmbl_62167
ENST00000675628.1	align_id:3572007|asmbl_62172
ENST00000547926.7	align_id:3572022|asmbl_62187
ENST00000671822.2	align_id:3572027|asmbl_62192
ENST00000676351.1	align_id:3572033|asmbl_62198
ENST00000675559.1	align_id:3572025|asmbl_62190
ENST00000676418.1	NMD likely if extended
ENST00000676418.1	align_id:3572026|asmbl_62191
ENST00000676331.1	align_id:3572037|asmbl_62202
ENST00000552770.3	align_id:3572031|asmbl_62196
ENST00000550962.6	align_id:1302066|asmbl_21969
ENST00000550962.6	pacbio_cs_merged_multi
ENST00000675361.1	align_id:1302065|asmbl_21968
ENST00000675361.1	pacbio_cs_merged_multi
ENST00000549011.5	alternative 5' UTR
ENST00000266712.11	MANE_select
ENST00000644744.1	CAGE supported TSS
ENST00000644744.1	LR annotation
ENST00000644744.1	MANE_select
ENST00000670029.1	Assembled from SLRseq reads (SRP049776)
ENST00000549278.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000279488.8	MANE_select
ENST00000548755.1	alternative 5' UTR
ENST00000657284.1	Assembled from SLRseq reads (SRP049776)
ENST00000313546.8	MANE_select
ENST00000529983.3	MANE_select
ENST00000605233.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655646.1	Assembled from SLRseq reads (SRP049776)
ENST00000428670.8	MANE_select
ENST00000551310.1	alternative 5' UTR
ENST00000651272.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000652964.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658748.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658788.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670390.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661507.1	Assembled from SLRseq reads (SRP049776)
ENST00000652014.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000667911.1	Assembled from SLRseq reads (SRP049776)
ENST00000671090.1	Assembled from SLRseq reads (SRP049776)
ENST00000668008.1	Assembled from SLRseq reads (SRP049776)
ENST00000658113.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661184.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662811.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000358859.3	MANE_select
ENST00000261172.8	MANE_select
ENST00000551767.1	alternative 5' UTR
ENST00000266719.4	MANE_select
ENST00000266718.5	MANE_select
ENST00000052754.10	MANE_select
ENST00000552962.5	alternative 5' UTR
ENST00000420120.6	NP_598011.1
ENST00000547568.6	NP_598012.1
ENST00000546391.5	alternative 5' UTR
ENST00000456569.2	NP_598014.1
ENST00000547937.5	alternative 5' UTR
ENST00000552145.5	alternative 5' UTR
ENST00000550563.5	alternative 5' UTR
ENST00000549513.5	alternative 5' UTR
ENST00000661839.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669621.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660548.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651000.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000667542.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657916.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652653.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000617041.1	CAGE supported TSS
ENST00000668890.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000546710.2	QC splicing correct
ENST00000664336.1	Assembled from SLRseq reads (SRP049776)
ENST00000671521.1	Assembled from SLRseq reads (SRP049776)
ENST00000551563.6	QC splicing correct
ENST00000548552.2	QC splicing correct
ENST00000656874.1	Assembled from SLRseq reads (SRP049776)
ENST00000653601.1	Assembled from SLRseq reads (SRP049776)
ENST00000667437.1	Assembled from SLRseq reads (SRP049776)
ENST00000663764.1	Assembled from SLRseq reads (SRP049776)
ENST00000256015.5	CAGE supported TSS
ENST00000256015.5	LR annotation
ENST00000256015.5	MANE_select
ENST00000665784.1	Assembled from SLRseq reads (SRP049776)
ENST00000654992.1	Assembled from SLRseq reads (SRP049776)
ENST00000615716.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000378485.1	NMD exception
ENST00000322349.13	MANE_select
ENST00000418984.7	QC splicing correct
ENST00000552353.2	QC splicing correct
ENST00000552451.1	QC splicing correct
ENST00000669608.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652973.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657309.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665612.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660842.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665146.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665173.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000655403.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000552584.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653145.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000548890.2	Assembled from SLRseq reads (SRP049776)
ENST00000415493.7	MANE_select
ENST00000318066.7	MANE_select
ENST00000549982.6	MANE_select
ENST00000500986.6	Assembled from SLRseq reads (SRP049776)
ENST00000668485.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000662875.1	Assembled from SLRseq reads (SRP049776)
ENST00000549206.5	alternative 5' UTR
ENST00000536696.6	alternative 5' UTR
ENST00000548091.5	alternative 5' UTR
ENST00000549122.5	alternative 5' UTR
ENST00000549887.1	alternative 5' UTR
ENST00000551556.2	MANE_select
ENST00000551556.2	alternative 5' UTR
ENST00000332896.8	MANE_select
ENST00000542893.2	alternative 5' UTR
ENST00000258526.9	MANE_select
ENST00000546733.1	confirm experimentally
ENST00000669622.1	Assembled from SLRseq reads (SRP049776)
ENST00000551029.1	QC splicing correct
ENST00000659763.1	Assembled from SLRseq reads (SRP049776)
ENST00000670207.1	Assembled from SLRseq reads (SRP049776)
ENST00000397809.10	MANE_select
ENST00000397809.10	alternative 5' UTR
ENST00000547232.5	alternative 5' UTR
ENST00000547575.5	alternative 5' UTR
ENST00000546527.1	alternative 5' UTR
ENST00000549532.1	QC splicing correct
ENST00000261226.9	MANE_select
ENST00000327772.7	MANE_select
ENST00000546788.1	not organism-supported
ENST00000333003.10	MANE_select
ENST00000551647.5	QC splicing correct
ENST00000547594.5	QC splicing correct
ENST00000547469.1	alternative 5' UTR
ENST00000343958.9	MANE_select
ENST00000436874.6	MANE_select
ENST00000323666.10	MANE_select
ENST00000550777.5	QC splicing correct
ENST00000551840.5	NAGNAG splice site
ENST00000258499.8	MANE_select
ENST00000393091.6	alternative 5' UTR
ENST00000552440.5	QC splicing correct
ENST00000537435.2	alternative 5' UTR
ENST00000551837.1	alternative 5' UTR
ENST00000549639.1	alternative 5' UTR
ENST00000343702.9	MANE_select
ENST00000344911.8	QC splicing correct
ENST00000344911.8	alternative 5' UTR
ENST00000674345.1	Assembled from SLRseq reads (SRP049776)
ENST00000552603.1	not organism-supported
ENST00000547980.1	alternative 5' UTR
ENST00000674466.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000670743.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000344280.8	MANE_select
ENST00000266736.7	MANE_select
ENST00000261208.8	MANE_select
ENST00000228740.7	MANE_select
ENST00000228741.8	MANE_select
ENST00000547249.1	alternative 5' UTR
ENST00000552142.5	QC splicing correct
ENST00000547860.1	alternative 5' UTR
ENST00000669020.1	Assembled from SLRseq reads (SRP049776)
ENST00000671546.1	Assembled from SLRseq reads (SRP049776)
ENST00000664308.1	Assembled from SLRseq reads (SRP049776)
ENST00000261211.8	MANE_select
ENST00000551816.5	alternative 5' UTR
ENST00000552496.5	alternative 5' UTR
ENST00000552262.1	alternative 5' UTR
ENST00000524981.9	MANE_select
ENST00000429527.6	alternative 5' UTR
ENST00000554226.5	alternative 5' UTR
ENST00000557478.5	alternative 5' UTR
ENST00000266742.9	MANE_select
ENST00000457368.2	alternative 5' UTR
ENST00000549896.1	QC splicing correct
ENST00000668647.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666269.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659208.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655366.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667306.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665975.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654331.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670745.1	Assembled from SLRseq reads (SRP049776)
ENST00000652810.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657936.1	Assembled from SLRseq reads (SRP049776)
ENST00000661686.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658877.1	Assembled from SLRseq reads (SRP049776)
ENST00000662330.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664685.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662772.1	Assembled from SLRseq reads (SRP049776)
ENST00000660138.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660138.1	Assembled from SLRseq reads (SRP049776)
ENST00000663509.1	Assembled from SLRseq reads (SRP049776)
ENST00000670160.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666798.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000548886.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662502.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656448.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664656.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000666664.1	Assembled from SLRseq reads (SRP049776)
ENST00000656458.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000547996.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667445.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663659.1	Assembled from SLRseq reads (SRP049776)
ENST00000663411.1	Assembled from SLRseq reads (SRP049776)
ENST00000552411.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650941.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000548911.1	QC splicing correct
ENST00000556029.6	CAGE supported TSS
ENST00000556029.6	MANE_select
ENST00000546828.6	NAGNAG splice site
ENST00000556678.1	not organism-supported
ENST00000188376.9	alternative 5' UTR
ENST00000552981.6	MANE_select
ENST00000552981.6	alternative 5' UTR
ENST00000549338.5	alternative 5' UTR
ENST00000548847.1	QC splicing correct
ENST00000299157.5	MANE_select
ENST00000551964.6	MANE_select
ENST00000547666.1	QC splicing correct
ENST00000547362.5	QC splicing correct
ENST00000546364.7	QC splicing correct
ENST00000324341.2	MANE_select
ENST00000670484.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000279907.12	MANE_select
ENST00000548404.6	QC splicing correct
ENST00000188312.7	MANE_select
ENST00000378244.6	QC splicing correct
ENST00000549687.5	alternative 5' UTR
ENST00000360820.7	MANE_select
ENST00000323346.10	MANE_select
ENST00000392986.8	MANE_select
ENST00000649582.1	QC splicing correct
ENST00000649582.1	upstream uORF
ENST00000648861.1	alternative 5' UTR
ENST00000648861.1	upstream uORF
ENST00000266754.9	alternative 5' UTR
ENST00000547754.6	MANE_select
ENST00000550295.1	alternative 5' UTR
ENST00000549155.6	upstream ATG
ENST00000392977.8	MANE_select
ENST00000546991.1	alternative 5' UTR
ENST00000552332.1	AA912113
ENST00000536262.3	MANE_select
ENST00000261637.5	MANE_select
ENST00000261636.13	MANE_select
ENST00000551828.5	alternative 5' UTR
ENST00000551828.5	upstream uORF
ENST00000548070.1	alternative 5' UTR
ENST00000547360.1	QC splicing correct
ENST00000551346.2	MANE_select
ENST00000550514.5	alternative 5' UTR
ENST00000550501.3	non canonical TEC
ENST00000361466.7	MANE_select
ENST00000551300.5	non canonical polymorphism
ENST00000551300.5	upstream uORF
ENST00000549608.1	CAGE supported TSS
ENST00000229266.8	MANE_select
ENST00000549128.5	Genoscope mRNA only
ENST00000266743.6	alternative 5' UTR
ENST00000266743.6	upstream ATG
ENST00000392924.2	MANE_select
ENST00000392924.2	upstream ATG
ENST00000392927.7	alternative 5' UTR
ENST00000392927.7	upstream ATG
ENST00000299314.12	MANE_select
ENST00000258534.13	MANE_select
ENST00000549365.1	non canonical TEC
ENST00000655973.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000240079.11	MANE_select
ENST00000552283.6	MANE_select
ENST00000551744.2	QC splicing correct
ENST00000550459.1	alternative 5' UTR
ENST00000327680.7	MANE_select
ENST00000327680.7	NP_060385.3
ENST00000329406.5	MANE_select
ENST00000337514.11	MANE_select
ENST00000392904.5	QC splicing correct
ENST00000644491.1	alternative 5' UTR
ENST00000424202.6	CAGE supported TSS
ENST00000392905.7	NP_001104753.1
ENST00000553106.6	MANE_select
ENST00000551988.5	NMD likely if extended
ENST00000551337.5	alternative 5' UTR
ENST00000546844.1	alternative 5' UTR
ENST00000548677.2	QC splicing correct
ENST00000546708.5	QC splicing correct
ENST00000266744.4	MANE_select
ENST00000661816.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000548415.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660834.1	Assembled from SLRseq reads (SRP049776)
ENST00000548594.6	Assembled from SLRseq reads (SRP049776)
ENST00000667540.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652849.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658970.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669766.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660400.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000552578.1	alternative 5' UTR
ENST00000650784.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000666854.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654623.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658835.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669702.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667724.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666598.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664661.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661990.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661201.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667519.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657489.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663320.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664607.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000388887.7	MANE_select
ENST00000392876.8	MANE_select
ENST00000548527.5	QC splicing correct
ENST00000548520.1	QC splicing correct
ENST00000681941.1	NAGNAG splice site
ENST00000299767.10	MANE_select
ENST00000651157.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000378090.9	MANE_select
ENST00000549478.1	alternative 5' UTR
ENST00000549478.1	upstream uORF
ENST00000553183.5	alternative 5' UTR
ENST00000547945.5	alternative 5' UTR
ENST00000552940.1	alternative 5' UTR
ENST00000392872.8	MANE_select
ENST00000360814.9	MANE_select
ENST00000546436.5	alternative 5' UTR
ENST00000548660.5	alternative 5' UTR
ENST00000548660.5	upstream uORF
ENST00000229330.9	MANE_select
ENST00000550444.1	upstream uORF
ENST00000550335.5	QC splicing correct
ENST00000240055.8	MANE_select
ENST00000551446.6	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000551727.5	alternative 5' UTR
ENST00000551727.5	upstream uORF
ENST00000547554.1	QC splicing correct
ENST00000652438.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000525566.6	MANE_select
ENST00000526266.5	alternative 5' UTR
ENST00000531691.5	alternative 5' UTR
ENST00000531689.5	alternative 5' UTR
ENST00000528079.6	QC splicing correct
ENST00000528079.6	alternative 5' UTR
ENST00000526580.5	alternative 5' UTR
ENST00000529784.5	alternative 5' UTR
ENST00000527879.2	MANE_select
ENST00000303694.6	MANE_select
ENST00000549260.5	NP_001167453.1
ENST00000415674.1	alternative 5' UTR
ENST00000411411.1	alternative 5' UTR
ENST00000449866.2	alternative 5' UTR
ENST00000433540.5	alternative 5' UTR
ENST00000424946.1	alternative 5' UTR
ENST00000417469.6	alternative 5' UTR
ENST00000432951.1	alternative 5' UTR
ENST00000671114.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000552951.7	MANE_select
ENST00000258494.14	MANE_select
ENST00000652515.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000652515.1	CAGE supported TSS
ENST00000552270.1	NAGNAG splice site
ENST00000311317.8	confirm experimentally
ENST00000332180.10	MANE_select
ENST00000620430.5	NAGNAG splice site
ENST00000547404.1	QC splicing correct
ENST00000258530.8	MANE_select
ENST00000547809.5	confirm experimentally
ENST00000443585.6	MANE_select
ENST00000657795.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653672.1	Assembled from RACEseq reads
ENST00000656319.1	Assembled from SLRseq reads (SRP049776)
ENST00000670167.1	Assembled from SLRseq reads (SRP049776)
ENST00000261402.7	MANE_select
ENST00000378026.5	MANE_select
ENST00000553143.5	alternative 5' UTR
ENST00000299045.8	MANE_select
ENST00000551802.5	alternative 5' UTR
ENST00000548428.1	alternative 5' UTR
ENST00000551228.1	alternative 5' UTR
ENST00000228347.9	MANE_select
ENST00000652234.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000392842.6	MANE_select
ENST00000539967.6	QC splicing correct
ENST00000655603.1	Assembled from RACEseq reads
ENST00000547531.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656627.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000548914.5	QC splicing correct
ENST00000392837.9	MANE_select
ENST00000658571.1	Assembled from RACEseq reads
ENST00000550344.5	alternative 5' UTR
ENST00000280756.9	MANE_select
ENST00000280756.9	alternative 5' UTR
ENST00000547081.1	alternative 5' UTR
ENST00000551813.1	alternative 5' UTR
ENST00000240050.9	MANE_select
ENST00000392830.6	alternative 5' UTR
ENST00000552029.1	alternative 5' UTR
ENST00000548101.1	alternative 5' UTR
ENST00000550736.1	alternative 5' UTR
ENST00000550496.1	alternative 5' UTR
ENST00000008527.10	MANE_select
ENST00000549356.1	alternative 3' UTR
ENST00000661116.1	Assembled from SLRseq reads (SRP049776)
ENST00000280758.10	MANE_select
ENST00000412830.8	MANE_select
ENST00000228437.10	MANE_select
ENST00000547268.1	QC splicing correct
ENST00000547188.1	alternative 5' UTR
ENST00000546829.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000664947.1	Assembled from SLRseq reads (SRP049776)
ENST00000651741.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000656276.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656276.1	Assembled from SLRseq reads (SRP049776)
ENST00000551629.2	QC splicing correct
ENST00000547525.6	MANE_select
ENST00000332082.8	alternative 5' UTR
ENST00000547185.1	QC splicing correct
ENST00000550402.6	MANE_select
ENST00000550402.6	alternative 5' UTR
ENST00000550573.5	alternative 5' UTR
ENST00000549466.1	alternative 5' UTR
ENST00000670674.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000552695.6	MANE_select
ENST00000546815.6	CAGE supported TSS
ENST00000546815.6	LR annotation
ENST00000546815.6	MANE_select
ENST00000662962.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000311893.14	CAGE supported TSS
ENST00000311893.14	MANE_select
ENST00000392806.4	MANE_select
ENST00000549031.1	alternative 5' UTR
ENST00000549447.1	alternative 5' UTR
ENST00000547567.1	alternative 5' UTR
ENST00000550948.2	MANE_select
ENST00000664158.1	Assembled from SLRseq reads (SRP049776)
ENST00000261401.8	MANE_select
ENST00000541050.5	alternative 5' UTR
ENST00000549384.5	QC splicing correct
ENST00000550542.5	QC splicing correct
ENST00000547294.5	QC splicing correct
ENST00000547294.5	alternative 5' UTR
ENST00000550032.5	alternative 5' UTR
ENST00000551550.5	alternative 5' UTR
ENST00000551044.1	alternative 5' UTR
ENST00000326495.10	MANE_select
ENST00000547862.6	QC splicing correct
ENST00000228476.8	MANE_select
ENST00000549215.5	QC splicing correct
ENST00000547166.1	alternative 5' UTR
ENST00000610966.5	MANE_select
ENST00000551683.2	confirm experimentally
ENST00000257548.10	MANE_select
ENST00000470117.2	QC splicing correct
ENST00000429722.3	MANE_select
ENST00000429722.3	alternative 5' UTR
ENST00000536242.1	alternative 5' UTR
ENST00000536358.1	alternative 5' UTR
ENST00000242576.7	MANE_select
ENST00000539287.5	QC splicing correct
ENST00000539864.1	alternative 5' UTR
ENST00000299162.10	MANE_select
ENST00000310903.9	QC splicing correct
ENST00000228495.11	MANE_select
ENST00000540355.5	QC splicing correct
ENST00000434735.6	alternative 5' UTR
ENST00000342494.8	MANE_select
ENST00000539599.5	alternative 5' UTR
ENST00000340074.9	alternative 5' UTR
ENST00000449510.6	non canonical TEC
ENST00000545712.7	MANE_select
ENST00000539335.5	alternative 5' UTR
ENST00000546277.5	alternative 5' UTR
ENST00000228510.8	MANE_select
ENST00000539696.5	QC splicing correct
ENST00000538780.2	MANE_select
ENST00000358906.3	alternative 5' UTR
ENST00000358906.3	non canonical TEC
ENST00000541460.2	Assembled from SLRseq reads (SRP049776)
ENST00000418703.7	alternative 5' UTR
ENST00000674908.1	CHESS_transcripts
ENST00000674908.1	CHS.12734.13
ENST00000674908.1	rgasp_Tho_hum_qbo_solid_GM12878
ENST00000675670.1	CHESS_transcripts
ENST00000675670.1	CHS.12734.11
ENST00000675670.1	rgasp_Tho_hum_qbo_solid_GM12878
ENST00000261740.7	MANE_select
ENST00000675533.1	CHS.12734.14
ENST00000675533.1	NMD likely if extended
ENST00000675533.1	rgasp_Tho_hum_qbo_solid_GM12878
ENST00000676376.1	CHS.12734.15
ENST00000676376.1	NMD likely if extended
ENST00000676376.1	rgasp_Tho_hum_qbo_solid_GM12878
ENST00000318348.9	MANE_select
ENST00000405876.9	MANE_select
ENST00000312777.9	alternative 5' UTR
ENST00000536408.2	alternative 5' UTR
ENST00000355312.8	MANE_select
ENST00000551209.5	QC splicing correct
ENST00000550186.5	upstream ATG
ENST00000320063.10	QC splicing correct
ENST00000261739.9	MANE_select
ENST00000547419.6	QC splicing correct
ENST00000549724.2	CAGE supported TSS
ENST00000242591.10	MANE_select
ENST00000242591.10	alternative 5' UTR
ENST00000549009.1	QC splicing correct
ENST00000539276.7	MANE_select
ENST00000377685.9	QC splicing correct
ENST00000377685.9	confirm experimentally
ENST00000455511.8	upstream ATG
ENST00000450008.3	upstream ATG
ENST00000547199.3	QC splicing correct
ENST00000228825.12	MANE_select
ENST00000549408.1	QC splicing correct
ENST00000228827.8	MANE_select
ENST00000377673.10	MANE_select
ENST00000549578.6	MANE_select
ENST00000360579.11	QC splicing correct
ENST00000409425.5	alternative 5' UTR
ENST00000409300.6	MANE_select
ENST00000447044.1	NMD likely if extended
ENST00000354300.5	MANE_select
ENST00000551590.5	non canonical conserved
ENST00000397656.8	non canonical conserved
ENST00000495659.6	SMINT2004583
ENST00000495659.6	non canonical conserved
ENST00000397655.7	non canonical conserved
ENST00000397659.9	MANE_select
ENST00000397659.9	non canonical conserved
ENST00000480648.5	non canonical conserved
ENST00000552762.5	NMD likely if extended
ENST00000242607.13	MANE_select
ENST00000242607.13	alternative 5' UTR
ENST00000549442.5	alternative 5' UTR
ENST00000546713.5	alternative 5' UTR
ENST00000335007.10	MANE_select
ENST00000550261.5	non canonical TEC
ENST00000308208.10	MANE_select
ENST00000228841.15	LR annotation
ENST00000228841.15	MANE_select
ENST00000658431.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652865.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654512.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000553177.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658709.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000548368.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657482.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666099.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659394.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654505.1	Assembled from SLRseq reads (SRP049776)
ENST00000666565.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000261726.11	MANE_select
ENST00000547838.2	alternative 5' UTR
ENST00000548163.1	alternative 5' UTR
ENST00000547710.1	alternative 5' UTR
ENST00000549321.1	QC splicing correct
ENST00000549321.1	alternative 5' UTR
ENST00000552663.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000341259.7	MANE_select
ENST00000550925.2	QC splicing correct
ENST00000538307.1	QC splicing correct
ENST00000643669.2	CAGE supported TSS
ENST00000643669.2	LR annotation
ENST00000673436.1	CAGE supported TSS
ENST00000673436.1	MANE_select
ENST00000672613.1	upstream ATG
ENST00000608853.5	CAGE supported TSS
ENST00000645162.1	NMD likely if extended
ENST00000481331.1	NMD likely if extended
ENST00000419234.9	MANE_select
ENST00000313698.9	MANE_select
ENST00000514615.5	alternative 5' UTR
ENST00000455480.6	NP_001130010.1
ENST00000505487.5	NMD likely if extended
ENST00000550198.5	NMD likely if extended
ENST00000261733.7	MANE_select
ENST00000442119.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652940.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656227.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000590479.5	not best-in-genome evidence
ENST00000671444.1	Assembled from SLRseq reads (SRP049776)
ENST00000656209.1	Assembled from SLRseq reads (SRP049776)
ENST00000550735.7	MANE_select
ENST00000550735.7	QC splicing correct
ENST00000546394.1	NMD likely if extended
ENST00000551404.6	QC splicing correct
ENST00000552374.7	MANE_select
ENST00000550037.5	alternative 5' UTR
ENST00000546537.6	QC splicing correct
ENST00000549425.5	alternative 5' UTR
ENST00000546962.5	alternative 5' UTR
ENST00000550233.1	alternative 5' UTR
ENST00000261735.4	MANE_select
ENST00000261745.9	MANE_select
ENST00000549358.5	alternative 5' UTR
ENST00000412615.7	MANE_select
ENST00000552896.1	alternative 5' UTR
ENST00000651701.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000202773.14	MANE_select
ENST00000424576.6	alternative 5' UTR
ENST00000550238.1	QC splicing correct
ENST00000550566.6	alternative 5' UTR
ENST00000549847.5	alternative 5' UTR
ENST00000551291.6	alternative 5' UTR
ENST00000553213.2	alternative 5' UTR
ENST00000548343.1	alternative 5' UTR
ENST00000351677.7	MANE_select
ENST00000635625.1	confirm experimentally
ENST00000635625.1	non canonical conserved
ENST00000635652.1	non canonical TEC
ENST00000549736.5	alternative 5' UTR
ENST00000548197.5	alternative 5' UTR
ENST00000547686.5	alternative 5' UTR
ENST00000543106.6	alternative 5' UTR
ENST00000551593.5	alternative 5' UTR
ENST00000546426.5	alternative 5' UTR
ENST00000551748.5	alternative 5' UTR
ENST00000546703.5	alternative 5' UTR
ENST00000547840.5	alternative 5' UTR
ENST00000547728.5	alternative 5' UTR
ENST00000549769.5	alternative 5' UTR
ENST00000552667.5	alternative 5' UTR
ENST00000389385.9	MANE_select
ENST00000551198.5	alternative 5' UTR
ENST00000415485.7	alternative 5' UTR
ENST00000552679.6	QC splicing correct
ENST00000553114.5	alternative 5' UTR
ENST00000549913.6	QC splicing correct
ENST00000680189.1	alternative 5' UTR
ENST00000202917.10	MANE_select
ENST00000681505.1	alternative 3' UTR
ENST00000681934.1	alternative 3' UTR
ENST00000551241.6	NP_001307080.1
ENST00000680230.1	alternative 3' UTR
ENST00000679505.1	alternative 3' UTR
ENST00000228928.12	MANE_select
ENST00000681134.1	alternative 3' UTR
ENST00000681147.1	alternative 3' UTR
ENST00000680293.1	alternative 3' UTR
ENST00000449768.2	NP_001027903.1
ENST00000392583.7	MANE_select
ENST00000680514.1	alternative 3' UTR
ENST00000546530.5	NAGNAG splice site
ENST00000546530.5	alternative 5' UTR
ENST00000446861.7	alternative 5' UTR
ENST00000548055.1	NAGNAG splice site
ENST00000551051.5	NAGNAG splice site
ENST00000546727.5	NAGNAG splice site
ENST00000335621.10	NP_001138344.1
ENST00000306014.10	MANE_select
ENST00000306014.10	NAGNAG splice site
ENST00000549271.1	NAGNAG splice site
ENST00000549621.5	alternative 5' UTR
ENST00000548278.2	MANE_select
ENST00000416617.3	MANE_select
ENST00000550873.5	alternative 5' UTR
ENST00000551099.5	alternative 5' UTR
ENST00000550785.5	NP_001137291.1
ENST00000335509.11	MANE_select
ENST00000548465.1	alternative 5' UTR
ENST00000552014.5	non canonical U12
ENST00000680972.1	MANE_select
ENST00000680972.1	non canonical U12
ENST00000550672.5	QC splicing correct
ENST00000550672.5	non canonical U12
ENST00000546737.5	QC splicing correct
ENST00000546737.5	non canonical U12
ENST00000553238.5	QC splicing correct
ENST00000553238.5	non canonical U12
ENST00000549181.5	QC splicing correct
ENST00000549181.5	alternative 5' UTR
ENST00000549181.5	non canonical U12
ENST00000549605.5	QC splicing correct
ENST00000549605.5	alternative 5' UTR
ENST00000549605.5	non canonical U12
ENST00000548186.5	alternative 5' UTR
ENST00000549372.1	alternative 5' UTR
ENST00000280800.5	MANE_select
ENST00000547163.1	QC splicing correct
ENST00000257549.9	MANE_select
ENST00000547342.1	QC splicing correct
ENST00000403593.9	MANE_select
ENST00000403593.9	alternative 5' UTR
ENST00000345635.8	QC splicing correct
ENST00000547802.1	alternative 5' UTR
ENST00000261731.4	MANE_select
ENST00000661760.1	Assembled from SLRseq reads (SRP049776)
ENST00000663699.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669504.1	Assembled from SLRseq reads (SRP049776)
ENST00000661033.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669851.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655514.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655514.1	Assembled from SLRseq reads (SRP049776)
ENST00000662465.1	Assembled from SLRseq reads (SRP049776)
ENST00000659032.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653736.1	Assembled from SLRseq reads (SRP049776)
ENST00000550223.6	Assembled from SLRseq reads (SRP049776)
ENST00000657279.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654810.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000510694.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662051.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000545145.6	alternative 3' UTR
ENST00000392561.7	alternative 3' UTR
ENST00000261741.10	MANE_select
ENST00000671241.1	Assembled from SLRseq reads (SRP049776)
ENST00000405440.7	MANE_select
ENST00000405440.7	alternative 5' UTR
ENST00000349716.9	NP_542448.1
ENST00000349155.7	MANE_select
ENST00000660721.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653540.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671588.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667467.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669628.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662786.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664799.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650643.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000666363.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000281928.9	MANE_select
ENST00000649607.1	NAGNAG splice site
ENST00000647567.1	NAGNAG splice site
ENST00000549373.1	QC splicing correct
ENST00000666828.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659057.1	Assembled from SLRseq reads (SRP049776)
ENST00000659479.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000556529.4	MANE_select
ENST00000261318.5	MANE_select
ENST00000392549.7	alternative 3' UTR
ENST00000407967.7	NP_116203
ENST00000257575.9	CAGE supported TSS
ENST00000257575.9	MANE_select
ENST00000257575.9	NP_001103373
ENST00000677328.1	CAGE supported TSS
ENST00000257572.5	MANE_select
ENST00000257572.5	NMD exception
ENST00000550505.5	NMD exception
ENST00000550505.5	QC splicing correct
ENST00000652555.1	MANE_select
ENST00000309909.10	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000309909.10	CAGE supported TSS
ENST00000335209.12	MANE_select
ENST00000622495.5	MANE_select
ENST00000317775.11	MANE_select
ENST00000339824.7	MANE_select
ENST00000339824.7	QC splicing correct
ENST00000339824.7	non canonical conserved
ENST00000545002.1	non canonical conserved
ENST00000454402.7	MANE_select
ENST00000420967.5	alternative 5' UTR
ENST00000392542.6	NP_853556.2
ENST00000535092.1	alternative 5' UTR
ENST00000315436.8	MANE_select
ENST00000537945.1	alternative 5' UTR
ENST00000359236.10	MANE_select
ENST00000612851.1	non canonical other
ENST00000321694.5	QC splicing correct
ENST00000261313.3	MANE_select
ENST00000419821.6	alternative 5' UTR
ENST00000392533.8	MANE_select
ENST00000538601.1	QC splicing correct
ENST00000535570.5	alternative 5' UTR
ENST00000541186.5	alternative 5' UTR
ENST00000541878.5	alternative 5' UTR
ENST00000542902.5	alternative 5' UTR
ENST00000542532.5	alternative 5' UTR
ENST00000541786.5	alternative 5' UTR
ENST00000539872.5	alternative 5' UTR
ENST00000543473.2	MANE_select
ENST00000543473.2	non canonical conserved
ENST00000360286.2	QC splicing correct
ENST00000655557.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000542577.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668907.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664005.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000267260.5	MANE_select
ENST00000651431.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000651189.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000676008.1	Ensembl_RNAseq_introns_testes
ENST00000676008.1	intropolis_filtered
ENST00000281938.7	MANE_select
ENST00000676071.1	PacBio_RACEseq_UKGTN_Liver_reads
ENST00000675900.1	Ensembl_RNAseq_introns_thyroid
ENST00000674715.1	PacBio_RACEseq_UKGTN_Liver_reads
ENST00000675211.1	intropolis_filtered
ENST00000675110.1	intropolis_filtered
ENST00000674763.1	intropolis_filtered
ENST00000674852.1	intropolis_filtered
ENST00000675573.1	Ensembl_RNAseq_introns
ENST00000327554.3	MANE_select
ENST00000327554.3	NP_848594.2
ENST00000665601.1	Assembled from SLRseq reads (SRP049776)
ENST00000426426.3	MANE_select
ENST00000426426.3	NP_001130006.1
ENST00000541640.5	alternative 5' UTR
ENST00000229328.10	MANE_select
ENST00000392521.7	MANE_select
ENST00000677993.1	CAGE supported TSS
ENST00000392520.2	not organism-supported
ENST00000229340.10	MANE_select
ENST00000611079.1	CAGE supported TSS
ENST00000300648.7	MANE_select
ENST00000551150.5	alternative 5' UTR
ENST00000392514.9	MANE_select
ENST00000546564.5	alternative 5' UTR
ENST00000552902.5	alternative 5' UTR
ENST00000550423.5	alternative 5' UTR
ENST00000551783.1	alternative 5' UTR
ENST00000551336.1	alternative 5' UTR
ENST00000542265.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664264.1	Assembled from SLRseq reads (SRP049776)
ENST00000667017.1	Assembled from SLRseq reads (SRP049776)
ENST00000667721.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000539446.6	Assembled from SLRseq reads (SRP049776)
ENST00000620336.1	CAGE supported TSS
ENST00000458477.6	NP_079433.3
ENST00000637617.2	MANE_select
ENST00000651205.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000617183.1	CAGE supported TSS
ENST00000202967.4	MANE_select
ENST00000308366.9	MANE_select
ENST00000257552.7	MANE_select
ENST00000662509.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000229379.3	MANE_select
ENST00000546954.2	MANE_select
ENST00000551765.6	MANE_select
ENST00000229390.8	MANE_select
ENST00000603963.1	not organism-supported
ENST00000392509.6	alternative 5' UTR
ENST00000549649.5	QC splicing correct
ENST00000549649.5	alternative 5' UTR
ENST00000548342.5	alternative 5' UTR
ENST00000548214.1	alternative 5' UTR
ENST00000392508.2	alternative 5' UTR
ENST00000550178.1	alternative 5' UTR
ENST00000550845.5	alternative 5' UTR
ENST00000549989.1	alternative 5' UTR
ENST00000242577.11	MANE_select
ENST00000669580.1	Assembled from SLRseq reads (SRP049776)
ENST00000668253.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000288532.11	MANE_select
ENST00000539486.1	alternative 5' UTR
ENST00000325954.9	MANE_select
ENST00000551139.6	QC splicing correct
ENST00000341039.6	NP_937845.1
ENST00000357500.5	MANE_select
ENST00000667391.1	Assembled from SLRseq reads (SRP049776)
ENST00000288616.7	NP_112482.1
ENST00000453000.1	upstream uORF
ENST00000228506.8	MANE_select
ENST00000535720.1	QC splicing correct
ENST00000344651.5	MANE_select
ENST00000242592.9	MANE_select
ENST00000353487.7	MANE_select
ENST00000353487.7	NP_620584.2
ENST00000662810.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000257555.11	MANE_select
ENST00000535955.5	NMD likely if extended
ENST00000538626.2	NMD likely if extended
ENST00000288757.7	MANE_select
ENST00000681590.1	alternative 3' UTR
ENST00000680485.1	alternative 3' UTR
ENST00000543677.2	alternative 3' UTR
ENST00000328963.10	MANE_select
ENST00000535250.5	QC splicing correct
ENST00000652651.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000619282.1	CAGE supported TSS
ENST00000337233.9	MANE_select
ENST00000652382.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000652382.1	alternative 5' UTR
ENST00000404169.8	MANE_select
ENST00000404169.8	alternative 5' UTR
ENST00000412367.6	alternative 5' UTR
ENST00000402834.8	QC splicing correct
ENST00000402834.8	alternative 5' UTR
ENST00000543477.1	alternative 5' UTR
ENST00000544485.1	alternative 5' UTR
ENST00000261819.8	MANE_select
ENST00000538223.1	QC splicing correct
ENST00000536837.1	alternative 5' UTR
ENST00000392465.7	NP_097402.2
ENST00000554868.1	alternative 5' UTR
ENST00000557402.1	alternative 5' UTR
ENST00000377071.9	MANE_select
ENST00000377071.9	QC splicing correct
ENST00000377069.8	QC splicing correct
ENST00000538503.5	QC splicing correct
ENST00000543025.5	QC splicing correct
ENST00000446152.6	QC splicing correct
ENST00000539394.5	QC splicing correct
ENST00000646827.1	sequence error
ENST00000611718.1	sequence error
ENST00000355329.7	MANE_select
ENST00000661592.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449592.7	MANE_select
ENST00000267205.7	MANE_select
ENST00000535560.1	alternative 5' UTR
ENST00000604567.6	MANE_select
ENST00000604567.6	non canonical U12
ENST00000542440.5	non canonical U12
ENST00000289004.8	MANE_select
ENST00000653866.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000541212.6	MANE_select
ENST00000546333.1	QC splicing correct
ENST00000288912.9	MANE_select
ENST00000261822.5	MANE_select
ENST00000538790.1	CAGE supported TSS
ENST00000660647.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653475.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000339777.5	MANE_select
ENST00000377035.2	MANE_select
ENST00000324189.5	MANE_select
ENST00000535274.1	alternative 5' UTR
ENST00000464942.7	CAGE supported TSS
ENST00000464942.7	LR annotation
ENST00000464942.7	MANE_select
ENST00000650715.1	genebuild_only_MANE
ENST00000353548.11	NP_001265271.1
ENST00000267199.9	MANE_select
ENST00000543633.5	QC splicing correct
ENST00000361654.8	QC splicing correct
ENST00000620786.5	MANE_select
ENST00000535290.5	alternative 5' UTR
ENST00000539080.1	alternative 5' UTR
ENST00000633063.3	MANE_select
ENST00000633063.3	non canonical U12
ENST00000536306.5	alternative 5' UTR
ENST00000540586.1	alternative 5' UTR
ENST00000331738.12	MANE_select
ENST00000531389.2	QC splicing correct
ENST00000527399.3	QC splicing correct
ENST00000333479.12	MANE_select
ENST00000545065.1	QC splicing correct
ENST00000545293.1	QC splicing correct
ENST00000328880.6	MANE_select
ENST00000528880.3	MANE_select
ENST00000432564.3	MANE_select
ENST00000280557.11	MANE_select
ENST00000392441.8	NP_115962.2
ENST00000253079.11	MANE_select
ENST00000253083.9	MANE_select
ENST00000267202.7	MANE_select
ENST00000537827.2	QC splicing correct
ENST00000623210.1	confirm experimentally
ENST00000280560.13	MANE_select
ENST00000280560.13	alternative 5' UTR
ENST00000392439.7	alternative 5' UTR
ENST00000542210.1	alternative 5' UTR
ENST00000541244.1	alternative 5' UTR
ENST00000624878.1	confirm experimentally
ENST00000606320.6	MANE_select
ENST00000539639.5	NMD likely if extended
ENST00000538169.5	NMD likely if extended
ENST00000545406.1	alternative 5' UTR
ENST00000625082.1	confirm experimentally
ENST00000425637.3	alternative 3' UTR
ENST00000680325.1	alternative 3' UTR
ENST00000253233.6	MANE_select
ENST00000366329.7	alternative 5' UTR
ENST00000536130.2	alternative 5' UTR
ENST00000679849.1	CAGE supported TSS
ENST00000679849.1	alternative 5' UTR
ENST00000543139.2	alternative 5' UTR
ENST00000429587.2	alternative 5' UTR
ENST00000652466.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000261692.7	MANE_select
ENST00000535796.1	alternative 5' UTR
ENST00000602398.3	MANE_select
ENST00000402868.8	MANE_select
ENST00000485469.1	QC splicing correct
ENST00000280571.10	MANE_select
ENST00000526639.3	MANE_select
ENST00000350887.5	alternative 5' UTR
ENST00000376874.9	MANE_select
ENST00000262225.8	MANE_select
ENST00000238146.9	MANE_select
ENST00000538744.5	QC splicing correct
ENST00000424014.7	MANE_select
ENST00000539951.5	QC splicing correct
ENST00000543341.7	MANE_select
ENST00000623229.1	confirm experimentally
ENST00000623811.1	confirm experimentally
ENST00000303372.7	MANE_select
ENST00000330342.8	MANE_select
ENST00000652313.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000623681.1	confirm experimentally
ENST00000673944.1	MANE_select
ENST00000467219.5	QC splicing correct
ENST00000447853.2	QC splicing correct
ENST00000540041.2	CAGE supported TSS
ENST00000238156.8	MANE_select
ENST00000539761.5	alternative 5' UTR
ENST00000539551.5	alternative 5' UTR
ENST00000545037.1	alternative 5' UTR
ENST00000537532.5	alternative 5' UTR
ENST00000539644.5	alternative 5' UTR
ENST00000392404.7	alternative 5' UTR
ENST00000541448.5	alternative 5' UTR
ENST00000337815.9	MANE_select
ENST00000337815.9	alternative 5' UTR
ENST00000543017.5	alternative 5' UTR
ENST00000546098.5	alternative 5' UTR
ENST00000539501.1	alternative 5' UTR
ENST00000389727.8	alternative 5' UTR
ENST00000546355.4	MANE_select
ENST00000546355.4	alternative 5' UTR
ENST00000338359.4	alternative 5' UTR
ENST00000461081.2	FLJ45889
ENST00000667910.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000623659.1	confirm experimentally
ENST00000625118.1	confirm experimentally
ENST00000624885.1	confirm experimentally
ENST00000624854.1	confirm experimentally
ENST00000624271.1	confirm experimentally
ENST00000624126.1	confirm experimentally
ENST00000623062.1	confirm experimentally
ENST00000624789.1	confirm experimentally
ENST00000623827.1	confirm experimentally
ENST00000261693.11	MANE_select
ENST00000681788.1	align_id:3576668|asmbl_66833
ENST00000681555.1	align_id:3576663|asmbl_66828
ENST00000680596.1	align_id:3576665|asmbl_66830
ENST00000680982.1	QC splicing correct
ENST00000680982.1	align_id:3576655|asmbl_66820
ENST00000680926.1	align_id:3576659|asmbl_66824
ENST00000681686.1	align_id:3576657|asmbl_66822
ENST00000679605.1	align_id:3576667|asmbl_66832
ENST00000681499.1	align_id:3576658|asmbl_66823
ENST00000679955.1	align_id:3576672|asmbl_66837
ENST00000539320.3	long_read_pipeline_2
ENST00000545493.1	alternative 5' UTR
ENST00000657226.1	Assembled from SLRseq reads (SRP049776)
ENST00000536769.1	alternative 5' UTR
ENST00000339647.6	MANE_select
ENST00000339647.6	NP_066289.2
ENST00000541272.1	alternative 5' UTR
ENST00000540351.1	alternative 5' UTR
ENST00000541645.1	alternative 5' UTR
ENST00000535131.1	alternative 5' UTR
ENST00000546271.1	alternative 5' UTR
ENST00000540700.1	alternative 5' UTR
ENST00000535859.1	alternative 5' UTR
ENST00000542416.1	alternative 5' UTR
ENST00000308736.7	MANE_select
ENST00000341446.9	MANE_select
ENST00000316519.11	MANE_select
ENST00000623804.1	alternative 5' UTR
ENST00000662486.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000623279.1	confirm experimentally
ENST00000622998.1	confirm experimentally
ENST00000624630.1	confirm experimentally
ENST00000623855.1	confirm experimentally
ENST00000604518.1	LOC100419701 CTAGE family, member 9 pseudogene
ENST00000604518.1	weak homology
ENST00000545784.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000507313.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668374.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653452.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660252.1	Assembled from RACEseq reads
ENST00000665464.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653418.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665882.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668594.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653364.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659525.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661236.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664730.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668523.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656734.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662894.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654753.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653935.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658727.1	Assembled from SLRseq reads (SRP049776)
ENST00000656545.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653111.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666372.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663226.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654535.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000624756.1	confirm experimentally
ENST00000623191.1	confirm experimentally
ENST00000624721.1	confirm experimentally
ENST00000667795.1	Assembled from SLRseq reads (SRP049776)
ENST00000636944.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662644.1	Assembled from SLRseq reads (SRP049776)
ENST00000650732.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000670916.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670226.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654221.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661190.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653244.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663607.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656915.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665686.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655151.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654279.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657054.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663153.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655565.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664729.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664858.1	Assembled from SLRseq reads (SRP049776)
ENST00000665178.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661524.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653837.1	Assembled from SLRseq reads (SRP049776)
ENST00000668646.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668022.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662173.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663560.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000623427.1	confirm experimentally
ENST00000625201.1	confirm experimentally
ENST00000656606.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667303.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000545535.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653913.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653842.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667256.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667312.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658458.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670225.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665976.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665976.1	Assembled from SLRseq reads (SRP049776)
ENST00000653920.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661264.1	Assembled from SLRseq reads (SRP049776)
ENST00000665993.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656138.1	Assembled from SLRseq reads (SRP049776)
ENST00000540250.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662118.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670324.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665222.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667490.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663771.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665641.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659340.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659587.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660082.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000535118.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655433.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669417.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661435.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668231.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659292.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670760.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669542.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656659.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665789.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660709.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654123.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668611.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662520.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656166.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654173.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663365.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664572.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667375.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659485.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660396.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661679.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656695.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665596.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669031.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662393.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666484.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654558.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000541359.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000616373.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659004.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670633.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656536.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666903.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655370.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660736.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000546117.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656909.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665131.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661743.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671627.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654541.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665986.1	Assembled from RACEseq reads
ENST00000659581.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665130.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000545508.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662540.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664274.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654468.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667878.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000544727.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000541348.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000507482.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658204.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664901.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657593.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662031.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660214.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651439.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651439.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000662160.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656033.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669743.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656597.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665379.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671361.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656788.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000540244.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000546062.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658026.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660588.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000650869.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000664581.1	Assembled from SLRseq reads (SRP049776)
ENST00000658388.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670342.1	Assembled from SLRseq reads (SRP049776)
ENST00000667353.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000617117.1	confirm experimentally
ENST00000671545.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660334.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670647.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000545739.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657634.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660421.1	Assembled from SLRseq reads (SRP049776)
ENST00000623908.1	confirm experimentally
ENST00000661170.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000653590.1	Assembled from SLRseq reads (SRP049776)
ENST00000660759.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669225.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668337.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666224.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000544251.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663397.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670083.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667656.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659673.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662161.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670513.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670939.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656677.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000540490.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000546180.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668325.1	Assembled from SLRseq reads (SRP049776)
ENST00000665028.1	Assembled from SLRseq reads (SRP049776)
ENST00000653056.1	Assembled from SLRseq reads (SRP049776)
ENST00000654876.1	Assembled from SLRseq reads (SRP049776)
ENST00000656884.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662498.1	Assembled from SLRseq reads (SRP049776)
ENST00000614177.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653435.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653237.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653237.1	Assembled from SLRseq reads (SRP049776)
ENST00000662793.1	Assembled from SLRseq reads (SRP049776)
ENST00000654827.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000542089.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000542089.2	Assembled from SLRseq reads (SRP049776)
ENST00000657270.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657270.1	Assembled from SLRseq reads (SRP049776)
ENST00000670551.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670753.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671300.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670359.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667075.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668801.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668801.1	Assembled from SLRseq reads (SRP049776)
ENST00000664297.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670020.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656740.1	Assembled from SLRseq reads (SRP049776)
ENST00000657939.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000544645.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000540882.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666805.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670117.1	Assembled from SLRseq reads (SRP049776)
ENST00000658578.1	Assembled from SLRseq reads (SRP049776)
ENST00000657743.1	Assembled from SLRseq reads (SRP049776)
ENST00000662200.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656701.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668140.1	Assembled from RACEseq reads
ENST00000659821.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653038.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666596.1	Assembled from SLRseq reads (SRP049776)
ENST00000658069.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665677.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000540745.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664800.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662704.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659735.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656374.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664832.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658374.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670798.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665570.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000541258.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662521.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653338.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654850.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668356.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669336.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658110.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000624053.1	confirm experimentally
ENST00000266771.10	MANE_select
ENST00000623017.1	confirm experimentally
ENST00000281703.11	MANE_select
ENST00000422113.7	MANE_select
ENST00000510001.6	QC splicing correct
ENST00000651191.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000657209.1	Assembled from SLRseq reads (SRP049776)
ENST00000622967.1	confirm experimentally
ENST00000660273.1	Assembled from SLRseq reads (SRP049776)
ENST00000536512.1	QC splicing correct
ENST00000624565.1	confirm experimentally
ENST00000611525.1	confirm experimentally
ENST00000624455.1	confirm experimentally
ENST00000245255.7	MANE_select
ENST00000546060.5	alternative 5' UTR
ENST00000539400.5	alternative 5' UTR
ENST00000539995.5	alternative 5' UTR
ENST00000535956.5	alternative 5' UTR
ENST00000542723.1	alternative 5' UTR
ENST00000624997.1	confirm experimentally
ENST00000623293.1	confirm experimentally
ENST00000624734.1	confirm experimentally
ENST00000623766.1	alternative 5' UTR
ENST00000666231.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000443685.4	nested 454 RNA-Seq supported
ENST00000624414.1	confirm experimentally
ENST00000392373.7	MANE_select
ENST00000543796.6	MANE_select
ENST00000392369.6	alternative 5' UTR
ENST00000541679.7	non canonical TEC
ENST00000261654.10	MANE_select
ENST00000624129.1	confirm experimentally
ENST00000624013.1	confirm experimentally
ENST00000623434.1	confirm experimentally
ENST00000668353.1	Assembled from SLRseq reads (SRP049776)
ENST00000654133.1	Assembled from SLRseq reads (SRP049776)
ENST00000536191.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668817.1	Assembled from SLRseq reads (SRP049776)
ENST00000653253.1	Assembled from SLRseq reads (SRP049776)
ENST00000623821.1	alternative 5' UTR
ENST00000666848.1	Assembled from SLRseq reads (SRP049776)
ENST00000428272.4	QC splicing correct
ENST00000659569.1	Assembled from SLRseq reads (SRP049776)
ENST00000623945.1	confirm experimentally
ENST00000657937.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669418.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669418.1	QC splicing correct
ENST00000669538.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000535133.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658806.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653719.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656260.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000624926.1	confirm experimentally
ENST00000537280.2	Assembled from SLRseq reads (SRP049776)
ENST00000654549.1	Assembled from SLRseq reads (SRP049776)
ENST00000623233.1	confirm experimentally
ENST00000508145.2	QC splicing correct
ENST00000261674.9	MANE_select
ENST00000360564.5	MANE_select
ENST00000321867.6	MANE_select
ENST00000624048.1	confirm experimentally
ENST00000322060.9	alternative 5' UTR
ENST00000542167.2	QC splicing correct
ENST00000376649.8	MANE_select
ENST00000538037.5	alternative 5' UTR
ENST00000535067.5	upstream_ATG-40
ENST00000389561.7	CAGE supported TSS
ENST00000389561.7	MANE_select
ENST00000446190.5	FLJ44224
ENST00000454179.6	alternative 5' UTR
ENST00000392352.5	FLJ33291
ENST00000392352.5	alternative 5' UTR
ENST00000407361.7	alternative 5' UTR
ENST00000539205.5	alternative 5' UTR
ENST00000332441.7	FLJ33915
ENST00000475841.2	FLJ46340
ENST00000624002.1	confirm experimentally
ENST00000397333.4	MANE_select
ENST00000330579.6	MANE_select
ENST00000541995.1	alternative 5' UTR
ENST00000538356.1	alternative 5' UTR
ENST00000542942.1	alternative 5' UTR
ENST00000623965.1	confirm experimentally
ENST00000625164.1	confirm experimentally
ENST00000613430.1	confirm experimentally
ENST00000623871.1	confirm experimentally
ENST00000651513.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000624298.1	confirm experimentally
ENST00000680143.1	HBMT00000321769.1:coding_mRNA
ENST00000680143.1	MANE_select
ENST00000624087.1	confirm experimentally
ENST00000622917.1	confirm experimentally
ENST00000376608.9	MANE_select
ENST00000376608.9	NP_001182449.1
ENST00000643471.2	LR annotation
ENST00000643471.2	MANE_select
ENST00000623606.1	confirm experimentally
ENST00000320574.10	MANE_select
ENST00000539215.5	NMD likely if extended
ENST00000317479.8	MANE_select
ENST00000498926.7	MANE_select
ENST00000357997.10	MANE_select
ENST00000539605.5	alternative 5' UTR
ENST00000204726.8	CAGE supported TSS
ENST00000541341.5	alternative 3' UTR
ENST00000450056.7	MANE_select
ENST00000315585.11	QC splicing correct
ENST00000315585.11	non canonical polymorphism
ENST00000511001.2	QC splicing correct
ENST00000540963.1	alternative 5' UTR
ENST00000623177.1	confirm experimentally
ENST00000360187.9	MANE_select
ENST00000328654.10	MANE_select
ENST00000543758.5	NAGNAG splice site
ENST00000543758.5	QC splicing correct
ENST00000543758.5	alternative 5' UTR
ENST00000438628.6	alternative 5' UTR
ENST00000539354.6	MANE_select
ENST00000539354.6	alternative 5' UTR
ENST00000536123.5	QC splicing correct
ENST00000536123.5	alternative 5' UTR
ENST00000543310.5	alternative 5' UTR
ENST00000545299.1	alternative 5' UTR
ENST00000356456.9	alternative 5' UTR
ENST00000355557.7	MANE_select
ENST00000537226.3	MANE_select
ENST00000650709.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000538918.5	alternative 5' UTR
ENST00000540609.5	alternative 5' UTR
ENST00000536877.5	alternative 5' UTR
ENST00000426665.6	alternative 5' UTR
ENST00000248211.11	MANE_select
ENST00000228289.9	alternative 5' UTR
ENST00000541211.6	NP_001159357.1
ENST00000546126.7	Extended 3' end with assembled from SLRseq reads (ENA:SRP049776)
ENST00000536435.7	MANE_select
ENST00000500625.7	NP_001159354.1
ENST00000539248.6	NP_001159355.1
ENST00000542711.6	NP_001159358.1
ENST00000536899.6	NP_001159356.2
ENST00000541975.2	alternative 5' UTR
ENST00000541009.6	NP_694422.2
ENST00000592241.5	NP_001159359.1
ENST00000545940.6	MANE_select
ENST00000443465.1	novel zinc finger protein pseudogene
ENST00000652806.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448748.1	QC splicing correct
ENST00000448748.1	putative novel transcript
ENST00000439212.1	novel pseudogene
ENST00000412714.1	QC splicing correct
ENST00000412714.1	not best-in-genome evidence
ENST00000412714.1	putative novel transcript
ENST00000443167.1	feminization 1 homolog a (FEM1A) (KIAA1785) pseudogene
ENST00000422609.1	QC splicing correct
ENST00000422609.1	not best-in-genome evidence
ENST00000422609.1	putative novel transcript
ENST00000477545.1	telomeric repeat binding factor (NIMA-interacting) 1 (TERF1) (TRF, PIN2, TRF1, TRBF1, hTRF1-AS) pseudogene
ENST00000447172.1	chromosome 21 open reading frame 70 (C21orf70) pseudogene
ENST00000444605.1	not best-in-genome evidence
ENST00000444605.1	putative novel transcript
ENST00000446657.2	novel pseudogene
ENST00000330492.4	calponin 3, acidic (CNN3) pseudogene
ENST00000432501.1	zinc finger protein 267 (ZNF267) pseudogene
ENST00000436585.1	melanoma antigen pseudogene
ENST00000457997.1	novel pseudogene
ENST00000418741.1	not best-in-genome evidence
ENST00000418741.1	putative novel transcript
ENST00000452841.1	KIAA0254 gene product pseudogene
ENST00000653982.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663325.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671023.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668892.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660513.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000447784.1	novel transcript
ENST00000664751.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663692.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663501.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669381.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665951.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000422082.4	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000422082.4	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000444553.5	FSH primary response (LRPR1 homolog,rat) 1 (FSHPRH1) pseudogene
ENST00000444553.5	PHD finger protein 2 (PHF2) (GRC5) pseudogene
ENST00000647583.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000456737.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000428086.2	novel transcript
ENST00000670804.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659140.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000450212.1	putative novel transcript
ENST00000657315.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425713.1	FSH primary response (LRPR1 homolog,rat) 1 (FSHPRH1) pseudogene
ENST00000433721.1	novel pseudogene similar to FLJ33047
ENST00000400113.8	MANE_select
ENST00000400113.8	not best-in-genome evidence
ENST00000382988.3	QC splicing correct
ENST00000442352.1	paraspeckle protein 1 alpha pseudogene
ENST00000428785.1	novel transcript
ENST00000437057.1	novel transcript
ENST00000670590.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670590.1	ID: compmerge.3114.pooled.chr13
ENST00000670590.1	pacbio_capture_seq_hsTestes : m150426_180445_42137_c100813572550000001823175210081507_s1_p0_134633_ccs ;
ENST00000454044.2	KIAA1074 protein pseudogene
ENST00000413833.1	putative novel transcript
ENST00000443554.1	QC splicing correct
ENST00000443554.1	not best-in-genome evidence
ENST00000382978.5	TPTE and PTEN homologous inositol lipid phosphatase (TPIP)
ENST00000440548.1	cytochrome c (HCS) pseudogene
ENST00000648281.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000670337.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668715.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438640.1	confirm experimentally
ENST00000361479.10	MANE_select
ENST00000423023.2	confirm experimentally
ENST00000497722.2	putative novel transcript
ENST00000471658.5	paraspeckle protein 1 (PSP1) (FLJ10955)
ENST00000492741.5	paraspeckle protein 1 (PSP1) (FLJ10955)
ENST00000338910.9	MANE_select
ENST00000338910.9	paraspeckle protein 1 (PSP1) (FLJ10955)
ENST00000427943.1	alternative 5' UTR
ENST00000427943.1	paraspeckle protein 1 (PSP1) (FLJ10955)
ENST00000435385.1	sialyltransferase 7D ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetygalactosaminide alpha-2,6-sialyltransferase) (SIAT7D) pseudogene
ENST00000382909.5	translation different to that published in Em:AF161535
ENST00000337963.9	MANE_select
ENST00000337963.9	genebuild_only_MANE
ENST00000620617.1	CAGE supported TSS
ENST00000610343.5	MANE_select
ENST00000382871.3	alternative 5' UTR
ENST00000620447.1	alternative 5' UTR
ENST00000620447.1	upstream ATG
ENST00000494061.6	QC splicing correct
ENST00000419430.1	HIV-1 rev binding protein 2 (HRB2) (RIP-1)pseudogene
ENST00000455848.1	putative novel transcript
ENST00000241125.4	MANE_select
ENST00000241125.4	NP_068773.2
ENST00000458378.1	peptidylpropyl isomerase D (cylophilin D) (PPID) pseudogene
ENST00000382848.5	LR annotation
ENST00000382848.5	MANE_select
ENST00000647029.1	CAGE supported TSS
ENST00000647029.1	LR annotation
ENST00000647029.1	MANE_select
ENST00000643121.1	alternative 5' UTR
ENST00000400066.8	alternative 5' UTR
ENST00000643211.1	alternative 5' UTR
ENST00000647243.1	alternative 5' UTR
ENST00000636852.1	alternative 5' UTR
ENST00000644667.1	alternative 5' UTR
ENST00000644236.1	alternative 5' UTR
ENST00000645654.1	alternative 5' UTR
ENST00000646108.1	alternative 5' UTR
ENST00000642251.1	alternative 5' UTR
ENST00000298248.12	LR annotation
ENST00000298248.12	MANE_select
ENST00000382812.5	protein translation is different to that published in Sw:Q9Y2S2 due to frame shift, with a resulting loss of 12 residues
ENST00000643750.1	alternative 5' UTR
ENST00000351808.10	MANE_select
ENST00000389373.3	alternative 5' UTR
ENST00000389373.3	alternatively spliced 5' UTR, shares CDS with bA476H16.2.1
ENST00000461115.5	non canonical TEC
ENST00000419313.1	novel pseudogene (FLJ124251 and FLJ14793)
ENST00000498088.1	alternative 5' UTR
ENST00000498088.1	interleukin 17D
ENST00000304920.3	interleukin 17D
ENST00000468605.1	interleukin 17D
ENST00000382758.6	MANE_select
ENST00000382758.6	alternative 5' UTR
ENST00000444720.1	RAN, member RAS oncogene family (RAN) pseudogene
ENST00000255305.10	QC splicing correct
ENST00000255305.10	non canonical U12
ENST00000255305.10	non canonical conserved
ENST00000490513.1	likely ortholog of mouse exportin 4 (XPO4)
ENST00000465018.1	likely ortholog of mouse exportin 4 (XPO4)
ENST00000417432.1	CCR4-NOT transcription complex, subunit 4  (CNOT4)(NOT4, NOT4H, CLONE243) pseudogene
ENST00000440699.1	heterogeneous nuclear ribonucleoprotein A1 (HNRPA1)(HNRNPA1) pseudogene
ENST00000454001.1	Laminin receptor 1 (67kD, ribosomal protein SA)(LAMR1)(LRP, p40, RPSA, 37LRP, LAMBR) pseudogene
ENST00000382592.5	MANE_select
ENST00000472754.1	LATS, large tumor suppressor, homolog 2 (LATS (large tumor suppressor, Drosophila) homolog 2) (LATS2)
ENST00000422510.1	QC splicing correct
ENST00000422510.1	putative novel transcript
ENST00000419579.2	ribosomal protein S12 (RPS12) pseudogene
ENST00000422501.1	chromosome 9 open reading frame 12 (C9orf12) (INSP5K2, FLJ1316) pseudogene
ENST00000607003.5	CAGE supported TSS
ENST00000471009.1	sin3-associated polypeptide, 18kD (SAP18)(SAP18p)
ENST00000314759.6	MANE_select
ENST00000309594.5	MANE_select
ENST00000653059.1	Assembled from SLRseq reads (SRP049776)
ENST00000443719.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000443719.2	putative novel transcript
ENST00000427890.3	Based on 1 EST, dotter shows final exon which can splice canonically but with 1 bp difference. Additional support for this splice junction from RNA-seq/Bodymap data. ROUGHT00000289092 ensembl_bodymap_testes
ENST00000418437.1	estrogen-related receptor alpha (ESRRA) pseudogene (ERR1, ERRa, ESRL1, NR3B1,ERRalpha)
ENST00000453309.3	QC splicing correct
ENST00000667082.1	Assembled from SLRseq reads (SRP049776)
ENST00000661286.1	Assembled from SLRseq reads (SRP049776)
ENST00000661173.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661173.1	Assembled from SLRseq reads (SRP049776)
ENST00000664989.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659153.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655569.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670912.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657403.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608957.5	novel transcript
ENST00000664392.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423575.5	novel transcript
ENST00000411525.1	novel transcript
ENST00000659380.1	Assembled from SLRseq reads (SRP049776)
ENST00000400595.3	G protein-coupled receptor kinase 6 (GPRK6)(GRK6) pseudogene
ENST00000449535.2	glyceraldehyde-3-phosphate dehydrogenase (GAPD)(GAPDH) pseudogene
ENST00000400590.8	MANE_select
ENST00000400590.8	novel protein
ENST00000464055.5	novel protein
ENST00000477811.5	novel protein
ENST00000494731.5	novel protein
ENST00000484277.1	novel protein
ENST00000419683.1	H2B histone family, member H (H2BFH)(H2B.h, H2B/h, dJ221C16.8) pseudogene
ENST00000382374.9	MANE_select
ENST00000468222.2	non canonical TEC
ENST00000430308.1	farnesyltransferase, CAAX box, alpha (FNTA)(FPTA, PGGT1A) pseudogene
ENST00000464254.1	ribosomal protein S7 (40S ribosomal protein S7) (RPS7) pseudogene
ENST00000382353.6	MANE_select
ENST00000461657.1	QC splicing correct
ENST00000461657.1	fibroblast growth factor 9 (glia-activating factor) (FGF9)(GAF, HBFG-9)
ENST00000478546.1	fibroblast growth factor 9 (glia-activating factor) (FGF9)(GAF, HBFG-9)
ENST00000653691.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663265.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413124.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669854.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654346.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657205.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659301.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655363.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658741.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656522.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420914.1	non-metastatic cells 1, protein (NM23A) expressed in (NME1)(NM23, NM23-H1) pseudogene
ENST00000671380.1	Assembled from SLRseq reads (SRP049776)
ENST00000450676.1	ferritin, heavy polypeptide 1 (FTH1) pseudogene
ENST00000445147.1	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 39 (DDX39) (DDXL, MGC8471, MGC8203) pseudogene
ENST00000413490.1	ribosomal protein L7a (RPL7A) pseudogene.
ENST00000668623.1	Assembled from SLRseq reads (SRP049776)
ENST00000663150.1	Assembled from SLRseq reads (SRP049776)
ENST00000669934.1	Assembled from SLRseq reads (SRP049776)
ENST00000658532.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000577004.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430708.1	brain abundant, membrane attached signal protein 1 (BASP1) pseudogene
ENST00000575845.1	QC splicing correct
ENST00000575845.1	not best-in-genome evidence
ENST00000418454.2	High-mobility group (nonhistone chromosomal) protein pseudogene
ENST00000414345.2	QC splicing correct
ENST00000414345.2	putative novel transcript
ENST00000218867.4	MANE_select
ENST00000452855.1	novel pseudogene
ENST00000418445.1	novel FLJ10498 pseudogene
ENST00000382292.9	MANE_select
ENST00000382292.9	NM_014363.4
ENST00000382292.9	QC splicing correct
ENST00000476776.1	novel protein
ENST00000434567.2	ribosomal protein, large, P1 (RPLP1) pseudogene
ENST00000671576.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656862.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655268.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661061.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000661061.1	Assembled from SLRseq reads (SRP049776)
ENST00000443778.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658244.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425800.1	putative novel transcript
ENST00000248484.9	MANE_select
ENST00000382172.4	MANE_select
ENST00000382133.9	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000382133.9	novel transcript
ENST00000663394.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000417034.1	novel transcript
ENST00000655811.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000424834.6	upstream uORF
ENST00000382108.8	MANE_select
ENST00000382108.8	genebuild_only_MANE
ENST00000494772.5	alternative 5' UTR
ENST00000439928.2	QC splicing correct
ENST00000430733.1	putative novel transcript
ENST00000382071.6	alternative 5' UTR
ENST00000449656.1	QC splicing correct
ENST00000449656.1	not best-in-genome evidence
ENST00000449656.1	novel transcript
ENST00000423502.1	novel pseudogene
ENST00000440905.5	novel transcript similar to TPTE and PTEN homologous inositol lipid phosphatase (TPIP)
ENST00000440905.5	possibly expresed pseudogene
ENST00000450973.1	novel transcript similar to TPTE and PTEN homologous inositol lipid phosphatase (TPIP)
ENST00000450973.1	possibly a pseudogene
ENST00000381989.4	MANE_select
ENST00000668417.1	Assembled from SLRseq reads (SRP049776)
ENST00000657093.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000455130.1	Paraspeckle protein 1 alpha isoform pseudogene
ENST00000453498.1	novel transcript (DKFZp434M082),similar to TPTE and PTEN homologous inositol lipid phosphatase (TPIP)
ENST00000381946.5	MANE_select
ENST00000431005.2	ribosomal protein L26 (RPL26) pseudogene
ENST00000649394.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000662637.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000457591.1	novel pseudogene
ENST00000255324.10	MANE_select
ENST00000255326.4	QC splicing correct
ENST00000418120.5	novel protein
ENST00000381884.9	MANE_select
ENST00000471870.1	centromere protein J (LAP, CPAP, LIP1, BM032)
ENST00000493190.1	centromere protein J (LAP, CPAP, LIP1, BM032)
ENST00000418179.1	centromere protein J (LAP, CPAP, LIP1, BM032)
ENST00000649209.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000505530.1	pseudogene similar to part of solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 (SLC25A15)
ENST00000428810.1	60S ribisomal protein L34 (RPL34) pseudogene
ENST00000281589.5	MANE_select
ENST00000515384.2	MANE_select
ENST00000656176.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000457628.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000457628.2	novel transcript
ENST00000413501.1	novel transcript
ENST00000657426.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000669952.1	Assembled from SLRseq reads (SRP049776)
ENST00000435725.2	putative novel transcript
ENST00000431134.2	60S ribosomal protein L23a (RPL23A) pseudogene
ENST00000381801.6	MANE_select
ENST00000482345.1	myotubularin related protein 6
ENST00000381736.8	MANE_select
ENST00000466694.5	QC splicing correct
ENST00000381718.7	NP_001008564.1
ENST00000495460.1	QC splicing correct
ENST00000477876.1	novel transcript
ENST00000447693.1	transcription elongation factor B (SIII), polypeptide 2 (18kD, elongin B) (TCEB2) (LOC246717) pseudogene
ENST00000381655.7	MANE_select
ENST00000381648.7	ATPase, aminophospholipid transporter-like, Class I, type 8A, member 2 (ML-1 protein)(IB, ATP, ML-1, ATPIB, DKFZP434B1913)
ENST00000381648.7	QC splicing correct
ENST00000447435.1	novel pseudogene
ENST00000319420.4	MANE_select
ENST00000439079.1	putative novel transcript
ENST00000425846.1	TcD37 homolog (HTCD37) pseudogene
ENST00000346166.7	ring finger protein (C3H2C3 type) 6 (RNF6)
ENST00000381570.7	ring finger protein (C3H2C3 type) 6 (RNF6)
ENST00000381588.9	MANE_select
ENST00000498039.5	ring finger protein (C3H2C3 type) 6 (RNF6)
ENST00000476347.1	ring finger protein (C3H2C3 type) 6 (RNF6)
ENST00000474280.1	ring finger protein (C3H2C3 type) 6 (RNF6)
ENST00000431978.1	protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)(PRKRIR) pseudogene
ENST00000381527.8	MANE_select
ENST00000381527.8	cyclin-dependent kinase 8 (CDK8)
ENST00000477277.5	cyclin-dependent kinase 8 (CDK8)
ENST00000480323.1	cyclin-dependent kinase 8 (CDK8)
ENST00000649055.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000335327.6	MANE_select
ENST00000496788.1	WAS protein family, member 3 (WASP family Verprolin-homologous protein 3) (WASF3)(SCAR3, Scar3, WAVE3, KIAA0900)
ENST00000425466.1	ribosomal protein S3A (RPS3A)(FTE1) pseudogene
ENST00000669581.1	Assembled from RACEseq reads
ENST00000413063.5	putative novel transcript
ENST00000650558.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000405846.5	MANE_select
ENST00000405846.5	alternative 5' UTR
ENST00000395943.3	novel pseudogene similar to HSPC123
ENST00000413365.1	ribosomal protein S21 (RPS21) pseudogene
ENST00000456044.1	ribosomal protein S20 (RPS20) pseudogene
ENST00000282344.11	MANE_select
ENST00000440657.1	putative novel transcript
ENST00000452222.1	putative novel transcript
ENST00000620494.1	CAGE supported TSS
ENST00000444744.1	putative novel transcript
ENST00000667032.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000473558.5	ribosomal protein L21 (60S ribosomal protein L21) (RPL21)(L21)
ENST00000272274.8	ribosomal protein L21 (60S ribosomal protein L21) (RPL21)(L21)
ENST00000319826.8	ribosomal protein L21 (60S ribosomal protein L21) (RPL21)(L21)
ENST00000326092.8	ribosomal protein L21 (60S ribosomal protein L21) (RPL21)(L21)
ENST00000493317.1	alternative 5' UTR
ENST00000493317.1	ribosomal protein L21 (60S ribosomal protein L21) (RPL21)(L21)
ENST00000466550.1	ribosomal protein L21 (60S ribosomal protein L21) (RPL21)(L21)
ENST00000483765.5	ribosomal protein L21 (60S ribosomal protein L21) (RPL21)(L21)
ENST00000485756.1	ribosomal protein L21 (60S ribosomal protein L21) (RPL21)(L21)
ENST00000241463.5	MANE_select
ENST00000475647.1	QC splicing correct
ENST00000431171.1	putative novel transcript
ENST00000381140.10	MANE_select
ENST00000381140.10	NP_002088
ENST00000381120.8	MANE_select
ENST00000316334.5	MANE_select
ENST00000649248.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000627604.1	alternative 5' UTR
ENST00000627604.1	upstream uORF
ENST00000637180.1	alternative 5' UTR
ENST00000621089.2	NP_001193488.1
ENST00000399697.7	LR annotation
ENST00000630983.1	QC splicing correct
ENST00000302979.5	LR annotation
ENST00000302979.5	MANE_select
ENST00000637071.1	alternative 5' UTR
ENST00000611364.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000414095.1	nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1) pseudogene
ENST00000302945.3	MANE_select
ENST00000381033.5	MANE_select
ENST00000381026.4	not best-in-genome evidence
ENST00000381020.8	MANE_select
ENST00000332715.6	MANE_select
ENST00000241453.12	MANE_select
ENST00000241453.12	fms-related tyrosine kinase 3
ENST00000429873.1	novel pseudogene
ENST00000380958.8	MANE_select
ENST00000380958.8	NP_787050.6
ENST00000282397.9	MANE_select
ENST00000421800.1	Eukaryotic initiation factor 4A (eIF4A) pseudogene
ENST00000460403.1	novel transcript
ENST00000380842.5	MANE_select
ENST00000475385.1	novel transcript
ENST00000266943.11	MANE_select
ENST00000419457.1	cytochrome P450, 51 (lanosterol 14-alpha-demethylase) (CYP51) pseudogene
ENST00000422362.1	novel pseudogene
ENST00000612955.6	MANE_select
ENST00000612955.6	upstream ATG
ENST00000380808.6	novel protein (KIAA0774)
ENST00000434779.5	novel transcript
ENST00000417624.5	novel transcript
ENST00000452602.1	novel transcript
ENST00000380752.10	MANE_select
ENST00000450494.1	alternative 5' UTR
ENST00000450494.1	alternatively spliced 5' UTR, shares CDS with bA274A8.3.1
ENST00000380680.5	MANE_select
ENST00000452384.1	translocase of inner mitochondrial membrane 8 homolog B (yeast) (TIMM8B) pseudogene
ENST00000662443.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656266.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658535.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000481738.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660467.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432770.1	putative novel transcript
ENST00000660539.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435044.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435044.2	putative novel transcript
ENST00000380615.8	MANE_select
ENST00000380615.8	alternative 5' UTR
ENST00000380615.8	alternative 5' UTR; shares CDS with RP11-374F3.1-002 and RP11-374F3.1-003
ENST00000380617.7	alternative 5' UTR
ENST00000380617.7	alternative 5' UTR; shares CDS with RP11-374F3.1-001 and RP11-374F3.1-003
ENST00000441394.1	alternative 5' UTR
ENST00000441394.1	alternative 5' UTR; shares CDS with RP11-374F3.1-001 and RP11-374F3.1-002
ENST00000420210.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657545.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654979.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654979.1	Assembled from SLRseq reads (SRP049776)
ENST00000655621.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000429808.5	QC splicing correct
ENST00000416261.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648879.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000635918.2	MANE_select
ENST00000341423.10	MANE_select
ENST00000326004.4	high mobility group box 1 (HMG1, HMG3)
ENST00000490788.1	high mobility group box 1 (HMG1, HMG3)
ENST00000490788.1	this variant and variants 2 and 4 could be part of the same variant
ENST00000468384.1	high mobility group box 1 (HMG1, HMG3)
ENST00000468384.1	this variant and variant 5 could be part of the same variant
ENST00000648233.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000648233.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000393978.2	novel pseudogene
ENST00000442257.1	microfibrillar-associated protein 1 (MFAP1) pseudogene
ENST00000433704.1	protein tyrosine phosphatase, non-receptor type 2 (PTPN2) pseudogene
ENST00000255304.9	MANE_select
ENST00000380490.5	MANE_select
ENST00000479597.1	arachidonate 5-lipoxygenase-activating protein (FLAP)
ENST00000414407.1	putative novel transcript
ENST00000665143.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440633.1	putative novel transcript
ENST00000585870.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000588726.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664586.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000591300.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000380482.9	FLJ31073
ENST00000380482.9	MANE_select
ENST00000428944.1	not organism-supported
ENST00000380473.8	MANE_select
ENST00000433788.1	novel transcript
ENST00000415283.1	putative novel transcript
ENST00000668092.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000320027.10	MANE_select
ENST00000602786.5	non canonical TEC
ENST00000602786.5	novel protein
ENST00000343307.5	MANE_select
ENST00000298386.7	MANE_select
ENST00000652992.1	Assembled from SLRseq reads (SRP049776)
ENST00000647500.1	CAGE supported TSS
ENST00000463566.1	novel transcript
ENST00000542859.6	MANE_select
ENST00000436046.1	CAGE supported TSS
ENST00000380217.1	hypothetical protein CG003 (13CDNA73)
ENST00000418076.1	putative novel transcript
ENST00000428419.1	novel transcript
ENST00000533490.7	CAGE supported TSS
ENST00000533490.7	MANE_select
ENST00000544455.6	CAGE supported TSS
ENST00000530893.6	non canonical TEC
ENST00000380152.8	CAGE supported TSS
ENST00000380152.8	MANE_select
ENST00000680887.1	CAGE supported TSS
ENST00000614259.2	non canonical TEC
ENST00000400497.2	interferon-induced protein with tetratricopeptide repeats 1 (IFIT1) pseudogene
ENST00000380130.7	MANE_select
ENST00000380130.7	genebuild_only_MANE
ENST00000503296.6	QC splicing correct
ENST00000509076.1	QC splicing correct
ENST00000674456.1	Assembled from SLRseq reads (SRP049776)
ENST00000674346.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674161.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000674161.1	NMD likely if extended
ENST00000674279.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674272.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000674422.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000674422.1	alternative 5' UTR
ENST00000674452.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000674384.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674219.1	Assembled from SLRseq reads (SRP049776)
ENST00000674349.1	Assembled from SLRseq reads (SRP049776)
ENST00000674349.1	alternative 5' UTR
ENST00000674428.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000503814.2	Assembled from RACEseq reads
ENST00000503814.2	Assembled from SLRseq reads (SRP049776)
ENST00000674421.1	Assembled from SLRseq reads (SRP049776)
ENST00000674421.1	alternative 5' UTR
ENST00000674465.1	Assembled from SLRseq reads (SRP049776)
ENST00000674465.1	alternative 5' UTR
ENST00000674297.1	Assembled from SLRseq reads (SRP049776)
ENST00000674297.1	upstream uORF
ENST00000674180.1	Assembled from SLRseq reads (SRP049776)
ENST00000674293.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674293.1	Assembled from SLRseq reads (SRP049776)
ENST00000674480.1	Assembled from SLRseq reads (SRP049776)
ENST00000674377.1	Assembled from SLRseq reads (SRP049776)
ENST00000674437.1	Assembled from SLRseq reads (SRP049776)
ENST00000674327.1	Assembled from SLRseq reads (SRP049776)
ENST00000674196.1	Assembled from SLRseq reads (SRP049776)
ENST00000674399.1	Assembled from SLRseq reads (SRP049776)
ENST00000674399.1	alternative 5' UTR
ENST00000674163.1	Assembled from SLRseq reads (SRP049776)
ENST00000674484.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000674484.1	alternative 5' UTR
ENST00000475731.1	QC splicing correct
ENST00000674433.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674433.1	Assembled from SLRseq reads (SRP049776)
ENST00000674408.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674494.1	Assembled from SLRseq reads (SRP049776)
ENST00000512755.2	Assembled from SLRseq reads (SRP049776)
ENST00000674276.1	Assembled from SLRseq reads (SRP049776)
ENST00000674369.1	Assembled from SLRseq reads (SRP049776)
ENST00000674462.1	Assembled from SLRseq reads (SRP049776)
ENST00000483088.2	Assembled from SLRseq reads (SRP049776)
ENST00000437678.1	ATPase pseudogene
ENST00000315596.15	MANE_select
ENST00000421002.1	novel transcript
ENST00000380099.4	MANE_select
ENST00000336934.10	MANE_select
ENST00000399365.7	NP_443083.1
ENST00000498019.2	QC splicing correct
ENST00000456087.1	confirm experimentally
ENST00000608205.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000588660.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608175.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000589122.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658512.1	Assembled from SLRseq reads (SRP049776)
ENST00000660406.1	Assembled from RACEseq reads
ENST00000648376.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000454681.2	novel transcript
ENST00000437698.1	novel transcript
ENST00000655117.1	Assembled from SLRseq reads (SRP049776)
ENST00000654283.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000653421.1	Assembled from SLRseq reads (SRP049776)
ENST00000445227.1	novel transcript
ENST00000660048.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000442716.1	QC splicing correct
ENST00000442716.1	putative novel transcript
ENST00000452207.1	novel transcript
ENST00000667510.1	Assembled from SLRseq reads (SRP049776)
ENST00000380071.8	MANE_select
ENST00000451853.1	voltage dependent anion channel protein pseudogene
ENST00000664334.1	Assembled from SLRseq reads (SRP049776)
ENST00000664114.1	Assembled from SLRseq reads (SRP049776)
ENST00000660916.1	Assembled from SLRseq reads (SRP049776)
ENST00000664537.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000379939.7	CAGE supported TSS
ENST00000379939.7	MANE_select
ENST00000497540.1	neurobeachin (BCL8B, FLJ10197, KIAA1544)
ENST00000629018.3	neurobeachin (BCL8B, FLJ10197, KIAA1544)
ENST00000379922.3	neurobeachin (BCL8B, FLJ10197, KIAA1544)
ENST00000461581.1	neurobeachin (BCL8B, FLJ10197, KIAA1544)
ENST00000453244.1	prohibitin (PHB) pseudogene
ENST00000379919.6	MANE_select
ENST00000379919.6	mab-21-like 1 (C. elegans) (CAGR1)
ENST00000664772.1	Assembled from SLRseq reads (SRP049776)
ENST00000656633.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670790.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456848.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456848.2	putative novel transcript
ENST00000422430.1	putative novel transcript
ENST00000655817.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000360631.8	MANE_select
ENST00000379893.5	doublecortin and CaM kinase-like 1 (DCLK, KIAA0369)
ENST00000477664.1	doublecortin and CaM kinase-like 1 (DCLK, KIAA0369)
ENST00000486239.1	doublecortin and CaM kinase-like 1 (DCLK, KIAA0369)
ENST00000460982.1	doublecortin and CaM kinase-like 1 (DCLK, KIAA0369)
ENST00000379892.4	doublecortin and CaM kinase-like 1 (DCLK, KIAA0369)
ENST00000379881.8	FLJ20449
ENST00000379881.8	MANE_select
ENST00000239859.8	MANE_select
ENST00000510088.5	novel protein
ENST00000471781.5	novel transcript
ENST00000486683.5	novel protein
ENST00000477250.1	novel protein
ENST00000485600.1	novel transcript
ENST00000438666.7	MANE_select
ENST00000650221.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000494062.2	alternative 5' UTR
ENST00000494062.2	novel transcript
ENST00000491805.5	novel transcript
ENST00000460126.5	novel transcript
ENST00000475603.5	novel transcript
ENST00000482146.1	novel transcript
ENST00000495510.1	KIAA0610 protein
ENST00000494703.1	novel transcript
ENST00000476377.1	novel transcript
ENST00000655398.1	Assembled from RACEseq reads
ENST00000630422.2	alternative 5' UTR
ENST00000255465.7	MANE_select
ENST00000625767.1	NAGNAG splice site
ENST00000448609.1	histone pseudogene
ENST00000315190.4	MANE_select
ENST00000432112.2	glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudogene
ENST00000453620.1	novel pseudogene
ENST00000421226.2	similar to binder of Arl Two (Bart1)
ENST00000255476.3	MANE_select
ENST00000472888.1	regulatory factor X-associated protein
ENST00000379826.5	CAGE supported TSS
ENST00000379826.5	MANE_select
ENST00000437983.2	QC splicing correct
ENST00000437983.2	putative novel transcript
ENST00000428620.1	MAP2K1IP1(mitogen-activated protein kinase kinase 1 interacting protein 1) pseudogene
ENST00000428062.1	Eukaryotic initiation factor pseudogene
ENST00000239891.4	MANE_select
ENST00000681893.1	align_id:1304818|asmbl_24721
ENST00000681016.1	align_id:1304816|asmbl_24719
ENST00000680949.1	align_id:1304844|asmbl_24747
ENST00000486410.2	novel transcript
ENST00000680795.1	align_id:1304828|asmbl_24731
ENST00000680671.1	align_id:1304842|asmbl_24745
ENST00000681151.1	align_id:3578871|asmbl_69036
ENST00000680012.1	align_id:3578874|asmbl_69039
ENST00000681553.1	align_id:3578864|asmbl_69029
ENST00000679760.1	align_id:3578866|asmbl_69031
ENST00000681214.1	align_id:3578878|asmbl_69043
ENST00000679572.1	align_id:3578868|asmbl_69033
ENST00000679837.1	align_id:1304835|asmbl_24738
ENST00000460230.1	novel transcript
ENST00000680127.1	align_id:3578870|asmbl_69035
ENST00000681110.1	align_id:3578872|asmbl_69037
ENST00000681892.1	align_id:3578867|asmbl_69032
ENST00000681727.1	align_id:1304839|asmbl_24742
ENST00000679397.1	align_id:3578873|asmbl_69038
ENST00000389704.4	MANE_select
ENST00000470423.1	Opa-interacting protein 2 (OIP2)
ENST00000470423.1	QC splicing correct
ENST00000350612.11	MANE_select
ENST00000356185.7	alternative 5' UTR
ENST00000464744.5	alternative 5' UTR
ENST00000379800.4	MANE_select
ENST00000412619.1	ribosomal protein S12 (RPS12) pseudogene
ENST00000414480.1	novel transcript
ENST00000379747.9	MANE_select
ENST00000497145.1	novel transcript
ENST00000379705.8	MANE_select
ENST00000488717.5	transient receptor potential cation channel, subfamily C, member 4
ENST00000379673.2	transient receptor potential cation channel, subfamily C, member 4
ENST00000494529.1	transient receptor potential cation channel, subfamily C, member 4
ENST00000660705.1	Assembled from SLRseq reads (SRP049776)
ENST00000666031.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000617568.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657277.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667295.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670194.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664606.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420325.1	heat shock 60kD protein 1 (chaperonin) (HSPD1) pseudogene
ENST00000434565.5	novel transcript
ENST00000454060.1	novel transcript
ENST00000451826.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451826.2	novel transcript
ENST00000239878.9	MANE_select
ENST00000414161.1	putative novel transcript
ENST00000653597.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657759.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664797.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000441430.1	novel transcript
ENST00000447765.1	peroxiredoxin 3 (PRDX3) pseudogene
ENST00000280481.9	MANE_select
ENST00000448887.1	putative novel transcript
ENST00000424744.1	phospholipase A2, group XII (PLA2G12) pseudogene
ENST00000445530.1	novel KIAA0565, KIAA1074 and breast cancer antigen NY-BR-1 containing pseudogene
ENST00000379631.9	MANE_select
ENST00000352251.8	MANE_select
ENST00000484434.3	non canonical TEC
ENST00000379599.6	NP_001017370.1
ENST00000379600.8	MANE_select
ENST00000663484.1	Assembled from SLRseq reads (SRP049776)
ENST00000618106.5	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000618106.5	Assembled from SLRseq reads (SRP049776)
ENST00000655935.1	Assembled from SLRseq reads (SRP049776)
ENST00000661973.1	Assembled from SLRseq reads (SRP049776)
ENST00000654394.1	Assembled from SLRseq reads (SRP049776)
ENST00000668183.1	Assembled from SLRseq reads (SRP049776)
ENST00000655342.1	Assembled from SLRseq reads (SRP049776)
ENST00000458481.1	NTF2-like export factor 1 (NXT1) pseudogene
ENST00000648377.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000379589.4	MANE_select
ENST00000495922.1	QC splicing correct
ENST00000495922.1	lipoma HMGIC fusion partner
ENST00000455146.8	MANE_select
ENST00000465775.1	component of oligomeric golgi complex 6 (KIAA1134, COD2)
ENST00000460701.1	component of oligomeric golgi complex 6 (KIAA1134, COD2)
ENST00000418361.2	novel protein similar to RIKEN cDNA A430101B06 gene (MGC1307) pseudogene
ENST00000658497.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653296.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654662.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670910.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000636192.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667216.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000667316.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661694.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663730.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000400430.6	novel transcript
ENST00000400431.2	novel transcript
ENST00000455241.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000455241.2	novel transcript
ENST00000662208.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000379561.6	LR annotation
ENST00000379561.6	MANE_select
ENST00000473775.1	forkhead box O1A (rhabdomyosarcoma)
ENST00000339626.5	ring finger protein 12 (RNF12) pseudogene
ENST00000323563.8	MANE_select
ENST00000498078.1	mitochondrial ribosomal protein S31
ENST00000461675.1	mitochondrial ribosomal protein S31
ENST00000435009.2	mitochondrial ribosomal protein S31
ENST00000478827.1	solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 (ORNT1)
ENST00000338625.9	MANE_select
ENST00000470509.1	not organism-supported
ENST00000652519.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000458118.5	TPTE and PTEN homologous inositol lipid phosphatase (TPIP) pseudogene
ENST00000432905.5	novel transcript similar to TPTE and PTEN homologous inositol lipid phosphatase (TPIP)
ENST00000379515.3	novel transcript similar to TPTE and PTEN homologous inositol lipid phosphatase (TPIP)
ENST00000660894.1	Assembled from SLRseq reads (SRP049776)
ENST00000239882.7	MANE_select
ENST00000498824.4	novel transcript
ENST00000405737.2	alternative 5' UTR
ENST00000379487.5	FLJ10695
ENST00000379487.5	MANE_select
ENST00000379485.2	FLJ30271
ENST00000379485.2	MANE_select
ENST00000660769.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661006.1	Assembled from SLRseq reads (SRP049776)
ENST00000400429.3	calmodulin pseudogene
ENST00000379483.4	FLJ34025
ENST00000379483.4	MANE_select
ENST00000450245.1	MORF-related gene 15 (MRG15) pseudogene
ENST00000379480.9	MANE_select
ENST00000473492.1	mitochondrial translational release factor 1 (RF1, MTTRF1)
ENST00000379477.5	alternative 5' UTR
ENST00000239852.10	novel transcript
ENST00000480434.5	mitochondrial translational release factor 1 (RF1, MTTRF1)
ENST00000497679.6	non canonical TEC
ENST00000497679.6	novel transcript
ENST00000492827.1	mitochondrial translational release factor 1 (RF1, MTTRF1)
ENST00000498245.1	mitochondrial translational release factor 1 (RF1, MTTRF1)
ENST00000416129.2	ras homolog gene family, member G (rho G) (ARHG) pseudogene
ENST00000379406.8	MANE_select
ENST00000477452.1	QC splicing correct
ENST00000454403.1	Tubulin beta-chain pseudogene
ENST00000421076.2	olfactory receptor pseudogene
ENST00000379359.4	MANE_select
ENST00000379359.4	novel protein (RGC32)
ENST00000379359.4	translation different to that published in Em:AF036549
ENST00000487837.1	novel protein (RGC32)
ENST00000379310.8	MANE_select
ENST00000451871.1	lysyl-tRNA synthetase (KARS) pseudogene
ENST00000435020.1	ribosomal protein S28 (RPS28) pseudogene
ENST00000337343.9	MANE_select
ENST00000489851.1	diacylglycerol kinase, eta
ENST00000413246.1	putative novel transcript
ENST00000403865.2	mitogen-activated protein kinase 6 (MAPK6) pseudogene
ENST00000442741.1	fumarate hydratase (FH) pseudogene
ENST00000025301.4	MANE_select
ENST00000453169.2	fatty acid binding protein 3, pseudogene 2 (FABP3P, FABP3-PS)
ENST00000398795.7	MANE_select
ENST00000313851.3	FLJ40919
ENST00000313851.3	MANE_select
ENST00000604485.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000415620.1	putative novel transcript
ENST00000313624.12	MANE_select
ENST00000396712.2	novel pseudogene
ENST00000379221.4	MANE_select
ENST00000425609.1	putative novel transcript
ENST00000482207.1	novel transcript
ENST00000430744.1	ribosomal protein L36 (RPL36) pseudogene
ENST00000444442.1	putative novel transcript
ENST00000658176.1	Assembled from RACEseq reads
ENST00000655032.1	Assembled from SLRseq reads (SRP049776)
ENST00000470137.5	novel transcript
ENST00000444614.8	MANE_select
ENST00000476570.2	QC splicing correct
ENST00000425906.1	alternative 5' UTR
ENST00000325686.7	FLJ38725
ENST00000325686.7	MANE_select
ENST00000439707.6	novel transcript
ENST00000423211.1	novel transcript
ENST00000378718.2	diacylglycerol kinase pseudogene
ENST00000662947.1	Assembled from SLRseq reads (SRP049776)
ENST00000667227.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664794.1	Assembled from SLRseq reads (SRP049776)
ENST00000661100.1	Assembled from SLRseq reads (SRP049776)
ENST00000655583.1	Assembled from SLRseq reads (SRP049776)
ENST00000654658.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432331.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432331.2	novel transcript
ENST00000654757.1	Assembled from SLRseq reads (SRP049776)
ENST00000437867.6	Assembled from SLRseq reads (SRP049776)
ENST00000437867.6	QC splicing correct
ENST00000659169.1	Assembled from SLRseq reads (SRP049776)
ENST00000666499.1	Assembled from SLRseq reads (SRP049776)
ENST00000400419.2	MANE_select
ENST00000400419.2	novel protein
ENST00000415082.1	novel transcript
ENST00000668811.1	Assembled from SLRseq reads (SRP049776)
ENST00000474333.5	QC splicing correct
ENST00000379179.8	MANE_select
ENST00000379179.8	similar to ribosome associated membrane protein 4 (LOC253406)
ENST00000493476.1	similar to ribosome associated membrane protein 4 (LOC253406)
ENST00000432701.2	putative novel transcript
ENST00000660135.1	Assembled from SLRseq reads (SRP049776)
ENST00000458659.3	MANE_select
ENST00000472477.1	alternative 5' UTR
ENST00000493016.1	alternative 5' UTR
ENST00000647828.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000422303.1	downregulated in ovarian cancer 1 (DOC-1) pseudogene
ENST00000656799.1	Assembled from SLRseq reads (SRP049776)
ENST00000426509.1	confirm experimentally
ENST00000414562.1	novel transcript
ENST00000379161.5	MANE_select
ENST00000437748.2	QC splicing correct
ENST00000437748.2	putative novel transcript
ENST00000379151.9	MANE_select
ENST00000479068.1	lipopolysaccharide specific response-7 protein (LSR7)
ENST00000473119.1	lipopolysaccharide specific response-7 protein (LSR7)
ENST00000340473.8	MANE_select
ENST00000530705.6	FLJ27337
ENST00000530705.6	MANE_select
ENST00000379055.5	alternative 5' UTR
ENST00000379055.5	alternatively spliced 5' UTR, shares CDS with bA290D2.2.2
ENST00000517509.5	QC splicing correct
ENST00000655984.1	Assembled from SLRseq reads (SRP049776)
ENST00000661180.1	Assembled from SLRseq reads (SRP049776)
ENST00000653307.1	Assembled from SLRseq reads (SRP049776)
ENST00000658870.1	Assembled from SLRseq reads (SRP049776)
ENST00000654229.1	Assembled from SLRseq reads (SRP049776)
ENST00000519454.6	Assembled from SLRseq reads (SRP049776)
ENST00000665586.1	Assembled from SLRseq reads (SRP049776)
ENST00000520590.5	non canonical TEC
ENST00000521336.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655666.1	Assembled from SLRseq reads (SRP049776)
ENST00000669281.1	Assembled from SLRseq reads (SRP049776)
ENST00000520622.6	Assembled from SLRseq reads (SRP049776)
ENST00000659577.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657761.1	Assembled from SLRseq reads (SRP049776)
ENST00000668209.1	Assembled from SLRseq reads (SRP049776)
ENST00000523506.6	Assembled from SLRseq reads (SRP049776)
ENST00000661291.1	Assembled from SLRseq reads (SRP049776)
ENST00000655385.1	Assembled from SLRseq reads (SRP049776)
ENST00000652823.1	Assembled from SLRseq reads (SRP049776)
ENST00000662212.1	Assembled from SLRseq reads (SRP049776)
ENST00000655124.1	Assembled from SLRseq reads (SRP049776)
ENST00000669627.1	Assembled from SLRseq reads (SRP049776)
ENST00000664881.1	Assembled from SLRseq reads (SRP049776)
ENST00000665079.1	Assembled from SLRseq reads (SRP049776)
ENST00000660680.1	Assembled from SLRseq reads (SRP049776)
ENST00000654626.1	Assembled from SLRseq reads (SRP049776)
ENST00000668256.1	Assembled from SLRseq reads (SRP049776)
ENST00000667948.1	Assembled from SLRseq reads (SRP049776)
ENST00000520310.6	Assembled from SLRseq reads (SRP049776)
ENST00000662614.1	Assembled from SLRseq reads (SRP049776)
ENST00000434849.3	Assembled from SLRseq reads (SRP049776)
ENST00000663584.1	Assembled from SLRseq reads (SRP049776)
ENST00000670765.1	Assembled from SLRseq reads (SRP049776)
ENST00000658500.1	Assembled from SLRseq reads (SRP049776)
ENST00000522673.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000520585.5	non canonical TEC
ENST00000665962.1	Assembled from SLRseq reads (SRP049776)
ENST00000330825.4	Assembled from SLRseq reads (SRP049776)
ENST00000379050.3	Assembled from SLRseq reads (SRP049776)
ENST00000398357.2	calumenin (CALU) pseudogene
ENST00000519676.6	MANE_select
ENST00000420177.1	cyclophilin pseudogene
ENST00000349995.10	MANE_select
ENST00000476702.1	component of oligomeric golgi complex 3
ENST00000465942.1	component of oligomeric golgi complex 3
ENST00000298738.3	MANE_select
ENST00000428659.1	translocase of inner mitochondrial membrane 9 homolog (yeast) (TIMM9) pseudogene
ENST00000447446.1	cytochrome c oxidase subunit IV pseudogene
ENST00000426552.1	aldo-keto reductase family 1, member B10 (aldose reductase) (AKR1B10) pseudogene
ENST00000310521.6	FLJ35810
ENST00000310521.6	MANE_select
ENST00000400405.4	MANE_select
ENST00000679008.1	MANE_select
ENST00000679008.1	align_id:3579695|asmbl_69860
ENST00000428921.1	alternative 5' UTR
ENST00000663159.1	Assembled from SLRseq reads (SRP049776)
ENST00000606991.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000606991.6	Assembled from SLRseq reads (SRP049776)
ENST00000659354.1	Assembled from SLRseq reads (SRP049776)
ENST00000606243.6	Assembled from SLRseq reads (SRP049776)
ENST00000415033.3	Assembled from SLRseq reads (SRP049776)
ENST00000415033.3	novel transcript
ENST00000663015.1	Assembled from SLRseq reads (SRP049776)
ENST00000664417.1	Assembled from SLRseq reads (SRP049776)
ENST00000658197.1	Assembled from SLRseq reads (SRP049776)
ENST00000624622.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000671398.1	Assembled from SLRseq reads (SRP049776)
ENST00000667034.1	Assembled from SLRseq reads (SRP049776)
ENST00000669053.1	Assembled from SLRseq reads (SRP049776)
ENST00000659168.1	Assembled from SLRseq reads (SRP049776)
ENST00000665492.1	Assembled from SLRseq reads (SRP049776)
ENST00000667409.1	Assembled from SLRseq reads (SRP049776)
ENST00000662364.1	Assembled from SLRseq reads (SRP049776)
ENST00000653655.1	Assembled from SLRseq reads (SRP049776)
ENST00000181383.10	LR annotation
ENST00000181383.10	MANE_select
ENST00000439329.5	NP_001265470.1
ENST00000323076.7	MANE_select
ENST00000323076.7	genebuild_only_MANE
ENST00000469227.5	lymphocyte cytosolic protein 1 (L-plastin)
ENST00000494531.1	lymphocyte cytosolic protein 1 (L-plastin)
ENST00000416500.5	alternative 5' UTR
ENST00000442275.1	alternative 5' UTR
ENST00000460190.1	lymphocyte cytosolic protein 1 (L-plastin)
ENST00000446175.6	CAGE supported TSS
ENST00000510179.1	novel pseudogene
ENST00000657876.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000429979.6	MANE_select
ENST00000676084.1	NMD likely if extended
ENST00000389908.7	NP_079389
ENST00000676051.1	alternative 5' UTR
ENST00000378787.7	FLJ21562
ENST00000439642.1	alternative 5' UTR
ENST00000647756.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648471.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668563.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667917.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671320.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650240.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670134.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649910.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660764.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655939.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671405.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648041.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663664.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661995.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659597.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659419.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666107.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663741.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657077.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663219.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000593640.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647866.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648986.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650465.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658922.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670209.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648245.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655282.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656994.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665124.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669385.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664096.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647922.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647744.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667460.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653039.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658378.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653919.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661606.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664325.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000458282.2	QC splicing correct
ENST00000400428.2	olfactory receptor pseudogene
ENST00000443945.6	QC splicing correct
ENST00000389797.8	MANE_select
ENST00000478412.1	alternative 5' UTR
ENST00000378720.8	MANE_select
ENST00000412582.5	this variant and variant 2 could be part of the same variant
ENST00000495654.1	esterase D/formylglutathione hydrolase
ENST00000495654.1	this variant and variants 4 and 5 could be part of the same variant
ENST00000542664.4	CAGE supported TSS
ENST00000542664.4	MANE_select
ENST00000543956.5	upstream ATG
ENST00000455126.5	putative novel transcript
ENST00000452352.5	putative novel transcript
ENST00000430913.2	novel transcript
ENST00000420444.1	guanine nucleotide binding protein (G protein), gamma 5 (GNG5) pseudogene
ENST00000435617.1	novel transcript
ENST00000493152.6	alternative 3' UTR
ENST00000481279.2	QC splicing correct
ENST00000646932.1	CAGE supported TSS
ENST00000646932.1	LR annotation
ENST00000646932.1	MANE_select
ENST00000467222.1	succinate-CoA ligase, ADP-forming, beta subunit (A-BETA)
ENST00000434484.5	succinate-CoA ligase, ADP-forming, beta subunit (A-BETA)
ENST00000643246.1	alternative 5' UTR
ENST00000432820.1	nucleosome assembly protein 1-like 1 (NAP1L1) pseudogene
ENST00000424277.2	ribosomal protein L27a (RPL27A) pseudogene
ENST00000417987.1	novel transcript
ENST00000657958.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423869.1	putative novel transcript
ENST00000258662.3	FLJ10956
ENST00000258662.3	MANE_select
ENST00000258648.7	MANE_select
ENST00000422483.1	novel transcript
ENST00000647800.2	CAGE supported TSS
ENST00000647800.2	LR annotation
ENST00000647800.2	MANE_select
ENST00000669900.1	Assembled from SLRseq reads (SRP049776)
ENST00000433480.2	novel transcript
ENST00000436963.1	putative novel transcript
ENST00000650461.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000267163.6	MANE_select
ENST00000467505.5	retinoblastoma 1 (including osteosarcoma)
ENST00000480491.1	retinoblastoma 1 (including osteosarcoma)
ENST00000484879.1	retinoblastoma 1 (including osteosarcoma)
ENST00000474415.1	KIAA0649 gene product pseudogene
ENST00000452246.1	PEST-containing nuclear protein (PCNP) pseudogene
ENST00000620633.5	MANE_select
ENST00000482024.1	novel transcript
ENST00000344532.8	MANE_select
ENST00000656210.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000612996.1	CAGE supported TSS
ENST00000452288.1	putative novel transcript
ENST00000425350.1	putative novel transcript
ENST00000614739.4	alternative 5' UTR
ENST00000617562.4	alternative 5' UTR
ENST00000621321.1	alternative 5' UTR
ENST00000622559.4	alternative 5' UTR
ENST00000453033.1	proteasome (prosome, macropain) activator subunit 2 (PA28 beta) (PSME2) pseudogene
ENST00000492622.6	MANE_select
ENST00000492622.6	NP_001073141.1
ENST00000398316.7	NP_055738.3
ENST00000451754.1	RAD17 homolog (S. pombe) pseudogene
ENST00000446556.1	cytochrome c oxidase subunit VIIc pseudogene 1
ENST00000447552.1	novel pseudogene
ENST00000218721.1	MANE_select
ENST00000251108.10	MANE_select
ENST00000409308.6	MANE_select
ENST00000409308.6	alternative 5' UTR
ENST00000410043.5	alternative 5' UTR
ENST00000457041.5	alternative 5' UTR
ENST00000413278.5	alternative 5' UTR
ENST00000409082.5	alternative 5' UTR
ENST00000481439.1	CLLL8 protein (CLLD8)
ENST00000435400.1	small nuclear ribonucleoprotein polypeptide G (SNRPG) pseudogene
ENST00000378319.8	MANE_select
ENST00000378319.8	NP_001035533.1
ENST00000467763.5	novel transcript
ENST00000476953.6	QC splicing correct
ENST00000426879.5	novel protein (contains putative zinc finger protein NY-REN-34 antigen (LOC51131))
ENST00000485919.5	alternative 5' UTR
ENST00000442195.5	alternative 5' UTR
ENST00000488958.5	NP_001035534.1
ENST00000495157.5	novel transcript
ENST00000460489.1	novel transcript
ENST00000488605.1	novel transcript
ENST00000378302.7	FLJ39335
ENST00000378302.7	MANE_select
ENST00000471984.1	novel transcript
ENST00000451812.1	novel pseudogene
ENST00000282026.2	MANE_select
ENST00000242827.11	MANE_select
ENST00000378270.5	emopamil binding related protein, delta8-delta7sterol isomerase related protein (EBRP)
ENST00000261667.8	MANE_select
ENST00000318353.2	meningioma expressed antigen 6 (coiled-coil proline-rich) (MGEA6) pseudogene
ENST00000361840.8	MANE_select
ENST00000665220.1	Assembled from RACEseq reads
ENST00000661799.1	Assembled from SLRseq reads (SRP049776)
ENST00000668133.1	Assembled from SLRseq reads (SRP049776)
ENST00000658343.1	Assembled from SLRseq reads (SRP049776)
ENST00000656688.1	Assembled from SLRseq reads (SRP049776)
ENST00000668305.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000425586.5	deleted in lymphocytic leukemia, 2 (LEU2, BCMSUN)
ENST00000458725.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000458725.6	Assembled from SLRseq reads (SRP049776)
ENST00000458725.6	deleted in lymphocytic leukemia, 2 (LEU2, BCMSUN)
ENST00000433070.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000433070.7	deleted in lymphocytic leukemia, 2 (LEU2, BCMSUN)
ENST00000443587.5	deleted in lymphocytic leukemia, 2 (LEU2, BCMSUN)
ENST00000659339.1	Assembled from SLRseq reads (SRP049776)
ENST00000421758.5	deleted in lymphocytic leukemia, 2 (LEU2, BCMSUN)
ENST00000449579.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000449579.2	deleted in lymphocytic leukemia, 2 (LEU2, BCMSUN)
ENST00000662092.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666359.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000442421.5	alternative 5' UTR
ENST00000378183.8	alternative 5' UTR
ENST00000356017.8	ppNP_001007279.1
ENST00000378182.4	MANE_select
ENST00000378182.4	alternative 5' UTR
ENST00000457662.2	alternative 5' UTR
ENST00000312942.2	MANE_select
ENST00000655550.1	Merged with: Assembled from SLRseq reads (SRP049776)
ENST00000655550.1	Merged with: TAGENE_transcript
ENST00000655550.1	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000469754.3	Assembled from SLRseq reads (SRP049776)
ENST00000469754.3	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000478860.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000486895.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000461527.7	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000463474.7	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000468168.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000476738.5	QC splicing correct
ENST00000476738.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000467721.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000468522.5	QC splicing correct
ENST00000468522.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000490577.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000491341.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000491615.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000659280.2	Also: Assembled from SLRseq reads (SRP049776)
ENST00000659280.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000484529.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000475913.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000485007.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000473075.3	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000483444.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000469127.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000463357.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000489542.6	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000491482.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000474630.6	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000479420.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000470726.7	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000647700.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000483169.6	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000469095.6	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000484869.6	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000498557.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000472136.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000470593.5	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000462427.2	QC splicing correct
ENST00000460525.6	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000484606.1	deleted in lymphocytic leukemia, 1 (BCMS, LEU1)
ENST00000658634.1	Assembled from SLRseq reads (SRP049776)
ENST00000671384.1	Assembled from SLRseq reads (SRP049776)
ENST00000668174.1	Assembled from RACEseq reads
ENST00000425606.1	ribosomal protein L18 (RPL18) pseudogene
ENST00000495613.1	suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) (ST13) (HIP, HOP) pseudogene
ENST00000445636.1	ribosomal protein L34 (RPL34) pseudogene
ENST00000504404.2	MANE_select
ENST00000664199.1	Assembled from SLRseq reads (SRP049776)
ENST00000660528.1	Assembled from SLRseq reads (SRP049776)
ENST00000673853.1	Assembled from SLRseq reads (SRP049776)
ENST00000659913.1	Assembled from SLRseq reads (SRP049776)
ENST00000637648.2	alternative 5' UTR
ENST00000336617.8	MANE_select
ENST00000644518.1	alternative 3' UTR
ENST00000644425.1	QC splicing correct
ENST00000636524.2	CAGE supported TSS
ENST00000636524.2	alternative 5' UTR
ENST00000643159.1	CAGE supported TSS
ENST00000645618.1	CAGE supported TSS
ENST00000611510.5	CAGE supported TSS
ENST00000642454.1	CAGE supported TSS
ENST00000646709.1	CAGE supported TSS
ENST00000646709.1	alternative 5' UTR
ENST00000647387.1	alternative 5' UTR
ENST00000495244.7	QC splicing correct
ENST00000485590.1	guanylate cyclase 1, soluble, beta 2
ENST00000399168.2	RPL5 (60S ribosomal protein 5) pseudogene
ENST00000497449.2	QC splicing correct
ENST00000322475.13	FLJ30707
ENST00000322475.13	MANE_select
ENST00000524365.5	QC splicing correct
ENST00000524365.5	alternative 5' UTR
ENST00000419898.2	alternative 5' UTR
ENST00000521255.5	alternative 5' UTR
ENST00000311234.9	MANE_select
ENST00000491189.5	alternative 5' UTR
ENST00000491723.5	QC splicing correct
ENST00000491997.2	NMD likely if extended
ENST00000485178.5	alternative 5' UTR
ENST00000483288.5	alternative 5' UTR
ENST00000657609.1	Assembled from SLRseq reads (SRP049776)
ENST00000665862.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670302.1	Assembled from SLRseq reads (SRP049776)
ENST00000608520.1	nested 454 RNA-Seq supported
ENST00000411777.1	small nuclear ribonucleoprotein polypeptide G pseudogene
ENST00000298125.7	MANE_select
ENST00000460145.2	QC splicing correct
ENST00000433775.2	ATP synthase pseudogene
ENST00000618844.1	CAGE supported TSS
ENST00000629372.3	MANE_select
ENST00000242819.7	FLJ25853
ENST00000242819.7	MANE_select
ENST00000242819.7	upstream ATG
ENST00000454280.1	meningioma-expressed antigen 6/11 (MEA6) (MEA11) pseudogene
ENST00000242839.10	LR annotation
ENST00000242839.10	MANE_select
ENST00000466629.1	ATPase, Cu++ transporting, beta polypeptide (Wilson disease)
ENST00000439042.1	fatty acid binding protein pseudogene
ENST00000649708.2	align_id:1305463|asmbl_25366
ENST00000523764.1	align_id:3580413|asmbl_70578
ENST00000680793.1	align_id:3580422|asmbl_70587
ENST00000649340.2	NAGNAG splice site
ENST00000649340.2	align_id:3580421|asmbl_70586
ENST00000679544.1	align_id:3580420|asmbl_70585
ENST00000681053.1	align_id:3580416|asmbl_70581
ENST00000681047.1	align_id:3580419|asmbl_70584
ENST00000521508.2	MANE_select
ENST00000680950.1	align_id:3580414|asmbl_70579
ENST00000681145.1	align_id:1305462|asmbl_25365
ENST00000681226.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000679359.1	align_id:3580417|asmbl_70582
ENST00000679495.1	align_id:3580430|asmbl_70595
ENST00000649651.2	align_id:3580415|asmbl_70580
ENST00000680058.1	align_id:3580418|asmbl_70583
ENST00000521776.2	MANE_select
ENST00000620675.4	alternative 3' UTR
ENST00000610828.5	MANE_select
ENST00000617054.1	upstream ATG
ENST00000551355.5	QC splicing correct
ENST00000550841.1	alternative 5' UTR
ENST00000416599.5	QC splicing correct
ENST00000669671.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668752.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000258613.5	MANE_select
ENST00000648254.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000650274.1	Assembled from SLRseq reads
ENST00000378060.9	MANE_select
ENST00000649498.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000614364.1	CAGE supported TSS
ENST00000258607.10	MANE_select
ENST00000258607.10	NP_060674.3
ENST00000647901.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000443679.1	not best-in-genome evidence
ENST00000446689.1	novel transcript
ENST00000357495.4	CAGE supported TSS
ENST00000310528.9	MANE_select
ENST00000448904.6	NAGNAG splice site
ENST00000377962.8	MANE_select
ENST00000377942.7	MANE_select
ENST00000338862.5	protocadherin 8
ENST00000219022.3	MANE_select
ENST00000660057.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656207.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659074.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669246.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663896.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666982.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417989.1	novel transcript
ENST00000664555.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657016.1	Assembled from SLRseq reads (SRP049776)
ENST00000669059.1	Assembled from SLRseq reads (SRP049776)
ENST00000661250.1	Assembled from SLRseq reads (SRP049776)
ENST00000653840.1	Assembled from SLRseq reads (SRP049776)
ENST00000663173.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655355.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666941.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423442.6	non canonical polymorphism
ENST00000423442.6	novel transcript
ENST00000427299.6	novel transcript
ENST00000451744.1	novel transcript
ENST00000666992.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000666524.1	Assembled from SLRseq reads (SRP049776)
ENST00000663979.1	Assembled from SLRseq reads (SRP049776)
ENST00000664384.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667279.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653762.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667562.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662654.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663949.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660202.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663656.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666772.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654477.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665950.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670720.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655552.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664689.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658906.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669825.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667023.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663182.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655706.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659950.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668021.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654268.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659542.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000622486.5	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666253.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664289.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662374.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667967.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659971.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667093.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668473.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662617.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663399.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654357.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654044.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657439.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653085.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670025.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000616396.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661274.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658622.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660941.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666476.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657822.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430567.2	hepatocyte nuclear factor 4, alpha (HNF4A) pseudogene
ENST00000653315.1	Assembled from SLRseq reads (SRP049776)
ENST00000431223.1	spermatogenesis associated 2 (SPATA2) pseudogene
ENST00000377931.1	MANE_select
ENST00000544357.2	MANE_select
ENST00000377930.1	MANE_select
ENST00000452123.3	MANE_select
ENST00000434815.1	MANE_select
ENST00000442543.1	mitochondrial cytochrome c oxidase II (MTCO2) pseudogene
ENST00000418448.1	solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 (SLC25A5) pseudogene
ENST00000377918.8	MANE_select
ENST00000377918.8	protocadherin 17 (PCH68, PCDH68)
ENST00000484979.5	confirm experimentally
ENST00000484979.5	non canonical TEC
ENST00000484979.5	protocadherin 17 (PCH68, PCDH68)
ENST00000454780.2	novel transcript
ENST00000435601.1	meningioma expressed antigen 6 (coiled-coil proline-rich) (MGEA6) pseudogene
ENST00000425106.1	DnaJ (Hsp40) homolog, subfamily A, member 1 (DNAJA1) pseudogene
ENST00000398005.3	high-mobility group pseudogene
ENST00000449146.1	polymerase (RNA) III (DNA directed) polypeptide K (POLR3K) pseudogene
ENST00000666115.1	Assembled from SLRseq reads (SRP049776)
ENST00000400324.9	AT/AC splices sites between exons 11 and 12 and also between exons 23 and 24
ENST00000400324.9	MANE_select
ENST00000649952.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000377908.6	AT/AC splices sites between exons 10 and 11 and also between exons 22 and 23
ENST00000400319.5	AT/AC splices sites between exons 9 and 10 and also between exons 21 and 22
ENST00000400319.5	non canonical U12
ENST00000470420.1	diaphanous homolog 3 (Drosophila)
ENST00000267215.8	AT/AC splices sites between exons 11 and 12 and also between exons 23 and 24
ENST00000498416.2	diaphanous homolog 3 (Drosophila)
ENST00000671612.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435636.5	novel transcript
ENST00000422052.5	novel transcript
ENST00000432995.1	novel transcript
ENST00000428656.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000428656.2	novel transcript
ENST00000423739.1	putative novel transcript
ENST00000448913.1	TAR DNA binding protein (TARDBP) pseudogene
ENST00000484389.6	QC splicing correct
ENST00000377894.6	novel protein (FLJ21007)
ENST00000377881.8	MANE_select
ENST00000377881.8	NAGNAG splice site
ENST00000377881.8	alternative 5' UTR
ENST00000377881.8	alternatively spliced 5' UTR, shares CDS with bA307D9.1.1
ENST00000377881.8	continued from bA359P14.3.3 in Em:AL359920; continues as bA459E2.1.3 in Em:AL512666
ENST00000377881.8	novel protein (FLJ21007)
ENST00000648252.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000377882.7	alternative 5' UTR
ENST00000377882.7	alternatively spliced 5' UTR, shares CDS with bA307D9.1.1
ENST00000663355.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662792.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669309.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654911.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658247.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656845.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656826.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413402.5	novel transcript
ENST00000455894.1	novel transcript
ENST00000666620.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448133.1	eukaryotic translation initiation factor 4A, variant 1 (EIF4A1) pseudogene
ENST00000669007.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662397.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000409204.4	NP_073754.2
ENST00000409186.1	alternative 5' UTR
ENST00000427086.1	ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) (RAC1) pseudogene
ENST00000662481.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000422527.1	putative novel transcript
ENST00000431656.1	putative novel transcript
ENST00000443577.1	ribosomal protein L32 (RPL32) pseudogene
ENST00000671601.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448411.1	novel transcript
ENST00000656857.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667975.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438352.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657217.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658776.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658776.1	novel transcript
ENST00000671427.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658907.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439454.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666997.1	Assembled from SLRseq reads (SRP049776)
ENST00000652818.1	Assembled from SLRseq reads (SRP049776)
ENST00000656278.1	Assembled from SLRseq reads (SRP049776)
ENST00000670475.1	Assembled from SLRseq reads (SRP049776)
ENST00000444536.1	novel transcript
ENST00000451570.1	novel transcript
ENST00000611641.1	LOC647264
ENST00000393023.2	protein phosphatase 1, regulatory (inhibitor) subunit 2 (PPP1R2) pseudogene
ENST00000664518.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456627.1	novel transcript (FLJ32909)
ENST00000669788.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654282.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000431953.1	nuclear transcription factor Y, alpha (NFYA) pseudogene
ENST00000441282.1	legumain (LGMN) (PRSC1) pseudogene
ENST00000397973.2	steroidogenic acute regulatory protein (STAR) pseudogene
ENST00000437777.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000437777.2	novel transcript
ENST00000663858.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665754.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653765.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452879.1	tripartite motif-containing 39 (TRIM39, TFP) pseudogene
ENST00000377865.7	MANE_select
ENST00000544246.5	protocadherin 9
ENST00000377861.4	protocadherin 9
ENST00000430861.1	putative novel transcript
ENST00000419371.2	QC splicing correct
ENST00000434073.1	novel transcript
ENST00000456459.1	novel transcript
ENST00000648561.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000433498.1	laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1) pseudogene
ENST00000656527.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662515.1	Assembled from SLRseq reads (SRP049776)
ENST00000427761.1	nucleophosmin (nucleolar phosphoprotein B23, numatrin) NPM1 pseudogene
ENST00000660570.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000457883.1	ELL-related RNA polymerase II, elongation factor (ELL2) pseudogene
ENST00000433537.1	novel HNRPA1 (heterogeneous nuclear ribonucleoprotein A1) pseudogene
ENST00000435890.1	ribosomal protein L37 (RPL37) pseudogene
ENST00000424532.1	60S ribosomal protein L12 (RPL12) pseudogene
ENST00000457792.1	small nuclear ribonucleoprotein polypeptide F (SNRPF)(SMF) pseudogene
ENST00000657223.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000648574.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000433664.1	novel transcript
ENST00000431686.1	putative novel transcript
ENST00000377844.9	MANE_select
ENST00000414504.6	QC splicing correct
ENST00000414504.6	novel transcript
ENST00000665905.1	Assembled from SLRseq reads (SRP049776)
ENST00000424524.2	Assembled from SLRseq reads (SRP049776)
ENST00000424524.2	novel transcript
ENST00000660386.1	Assembled from SLRseq reads (SRP049776)
ENST00000655045.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667632.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000428761.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000428761.2	novel transcript
ENST00000661523.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664823.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665820.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660222.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656251.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666881.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659244.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655546.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653160.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658800.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663997.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662353.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653878.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671477.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671240.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668650.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440529.1	rab9 effector p40 (RAB9P40) pseudogene
ENST00000613252.5	MANE_select
ENST00000613252.5	NP_542937.3
ENST00000619232.1	QC splicing correct
ENST00000619232.1	dachshund homolog (Drosophila) (DACH1, FLJ10138)
ENST00000440551.1	H3 histone family pseudogene
ENST00000422213.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000418340.1	ribosomal protein L35 (RPL35) pseudogene
ENST00000430654.2	ribosomal protein S10 (RPS10) pseudogene
ENST00000455326.2	pseudogene similar to part of ribosomal protein L18 (RPL18)
ENST00000433345.1	60S ribosomal protein L21 (RPL21) pseudogene
ENST00000377818.4	MANE_select
ENST00000377818.4	continued from bA342J4.1 in Em:AL138695
ENST00000377818.4	novel protein
ENST00000651477.1	alternative 5' UTR
ENST00000390667.11	MANE_select
ENST00000390667.11	upstream ATG
ENST00000377767.9	MANE_select
ENST00000490646.1	QC splicing correct
ENST00000475871.1	mitotic control protein homolog (DIS3)(KIAA1008)
ENST00000326291.11	MANE_select
ENST00000326291.11	progesterone-induced blocking factor 1 (PIBF1)
ENST00000489797.1	progesterone-induced blocking factor 1 (PIBF1)
ENST00000492803.1	progesterone-induced blocking factor 1 (PIBF1)
ENST00000486330.1	progesterone-induced blocking factor 1 (PIBF1)
ENST00000489922.5	progesterone-induced blocking factor 1 (PIBF1)
ENST00000469712.1	progesterone-induced blocking factor 1 (PIBF1)
ENST00000437000.1	proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 (PSMD10) pseudogene.
ENST00000477333.5	Kruppel-like factor 5 (intestinal) (KLF5)(CKLF, IKLF, BTEB2)
ENST00000377687.6	MANE_select
ENST00000476859.1	Kruppel-like factor 5 (intestinal) (KLF5)(CKLF, IKLF, BTEB2)
ENST00000464404.2	Kruppel-like factor 5 (intestinal) (KLF5)(CKLF, IKLF, BTEB2)
ENST00000423401.1	fatty acid binding protein 5 (psoriasis-associated) (FABP5)(EFABP, E-FABP, PAFABP, PA-FABP) pseudogene
ENST00000443621.1	putative novel transcript
ENST00000649507.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430033.1	QC splicing correct
ENST00000430033.1	novel transcript
ENST00000660666.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666930.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419499.1	novel transcript
ENST00000653992.1	Assembled from SLRseq reads (SRP049776)
ENST00000662799.1	Assembled from SLRseq reads (SRP049776)
ENST00000655413.1	Assembled from SLRseq reads (SRP049776)
ENST00000664361.1	Assembled from SLRseq reads (SRP049776)
ENST00000653841.1	Assembled from SLRseq reads (SRP049776)
ENST00000664844.1	Assembled from SLRseq reads (SRP049776)
ENST00000658820.1	Assembled from SLRseq reads (SRP049776)
ENST00000663108.1	Assembled from SLRseq reads (SRP049776)
ENST00000654479.1	Assembled from SLRseq reads (SRP049776)
ENST00000662433.1	Assembled from SLRseq reads (SRP049776)
ENST00000669178.1	Assembled from SLRseq reads (SRP049776)
ENST00000649990.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000423629.1	novel transcript
ENST00000594461.2	novel transcript
ENST00000451336.2	novel transcript
ENST00000664176.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418778.1	sudD suppressor of bimD6 homolog (A.nidulans) (SUDD) pseudogene
ENST00000415208.1	signal sequence receptor, alpha (translocon-associated protein alpha) (SSR1) pseudogene
ENST00000434832.1	putative novel transcript
ENST00000648194.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000377636.8	MANE_select
ENST00000377636.8	TBC1 domain family, member 4 (KIAA0603)
ENST00000478591.1	TBC1 domain family, member 4 (KIAA0603)
ENST00000493487.1	TBC1 domain family, member 4 (KIAA0603)
ENST00000413735.1	TBC1 domain family, member 4 (KIAA0603)
ENST00000488955.1	TBC1 domain family, member 4 (KIAA0603)
ENST00000377615.7	upstream_ATG-40
ENST00000497707.5	QC splicing correct
ENST00000377595.8	MANE_select
ENST00000570285.1	QC splicing correct
ENST00000667896.1	Assembled from SLRseq reads (SRP049776)
ENST00000377534.8	MANE_select
ENST00000377534.8	genebuild_only_MANE
ENST00000534657.5	alternative 5' UTR
ENST00000321797.12	alternative 5' UTR
ENST00000465261.6	alternative 5' UTR
ENST00000497947.6	alternative 5' UTR
ENST00000526371.1	alternative 5' UTR
ENST00000526528.1	alternative 5' UTR
ENST00000489941.6	alternative 5' UTR
ENST00000525373.5	alternative 5' UTR
ENST00000485987.1	LIM domain only 7(KIAA0858)
ENST00000525107.6	QC splicing correct
ENST00000482116.1	LIM domain only 7 (KIAA0858)
ENST00000424489.1	novel pseudogene (FLJ13188, FLJ22977)
ENST00000436872.2	novel transcript
ENST00000648060.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000653636.1	Assembled from SLRseq reads (SRP049776)
ENST00000664628.1	Assembled from SLRseq reads (SRP049776)
ENST00000377474.4	MANE_select
ENST00000426582.2	basic transcription factor 3 (BTF3) pseudogene
ENST00000377462.6	MANE_select
ENST00000377462.6	QC splicing correct
ENST00000377462.6	novel protein similar to mouse Irg1 (immunoresponsive gene 1)
ENST00000424827.1	ribosomal protein L7 (RPL7) pseudogene
ENST00000436565.2	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 9 (DDX9) pseudogene
ENST00000636183.2	NP_006484.1
ENST00000636183.2	upstream ATG
ENST00000636780.2	upstream ATG
ENST00000485938.4	upstream ATG
ENST00000637537.2	upstream ATG
ENST00000377453.9	CAGE supported TSS
ENST00000377453.9	MANE_select
ENST00000635989.1	NMD likely if extended
ENST00000636405.1	CAGE supported TSS
ENST00000636681.1	CAGE supported TSS
ENST00000636705.1	CAGE supported TSS
ENST00000485797.2	F-box and leucine-rich repeat protein 3A (FBXL3A)(FBL3, FBL3A)
ENST00000477982.2	F-box and leucine-rich repeat protein 3A (FBXL3A)(FBL3, FBL3A)
ENST00000355619.10	MANE_select
ENST00000470210.1	F-box and leucine-rich repeat protein 3A (FBXL3A)(FBL3, FBL3A)
ENST00000472949.1	F-box and leucine-rich repeat protein 3A (FBXL3A)(FBL3, FBL3A)
ENST00000472949.1	QC splicing correct
ENST00000422231.6	QC splicing correct
ENST00000422231.6	novel transcript
ENST00000450627.6	QC splicing correct
ENST00000450627.6	novel transcript
ENST00000448470.2	QC splicing correct
ENST00000448470.2	novel transcript
ENST00000544440.7	MANE_select
ENST00000485061.2	NMD likely if extended
ENST00000485061.2	novel protein (KIAA0916)
ENST00000482517.5	novel protein (KIAA0916)
ENST00000462987.2	novel protein (KIAA0916)
ENST00000498073.2	novel protein (KIAA0916)
ENST00000466564.2	novel protein (KIAA0916)
ENST00000486679.2	continued from bA428G23.1.3 in Em:AL159154
ENST00000486679.2	novel protein (KIAA0916)
ENST00000474882.2	novel protein (KIAA0916)
ENST00000491491.1	not organism-supported
ENST00000428716.2	putative novel transcript
ENST00000649088.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000349847.4	MANE_select
ENST00000469982.1	sciellin
ENST00000654937.1	Assembled from SLRseq reads (SRP049776)
ENST00000457528.6	novel transcript
ENST00000456280.2	novel transcript
ENST00000450718.1	SPTLC1 (serine palmitoyltransferase, long chain base subunit 1) pseudogene
ENST00000418532.6	MANE_select
ENST00000418532.6	genebuild_only_MANE
ENST00000446759.5	novel protein
ENST00000488699.5	NP_00103524.2
ENST00000441784.5	alternative 5' UTR
ENST00000462234.5	alternative 5' UTR
ENST00000496045.5	alternative 5' UTR
ENST00000474663.5	alternative 5' UTR
ENST00000481614.1	alternative 5' UTR
ENST00000358679.3	NP_653196.1
ENST00000667150.1	Assembled from SLRseq reads (SRP049776)
ENST00000664378.1	Assembled from SLRseq reads (SRP049776)
ENST00000422405.1	novel transcript
ENST00000646948.1	CAGE supported TSS
ENST00000646948.1	alternative 5' UTR
ENST00000646607.2	LR annotation
ENST00000646607.2	MANE_select
ENST00000646605.1	alternative 5' UTR
ENST00000626030.1	NP_003982.1
ENST00000475537.2	alternative 5' UTR
ENST00000645696.1	alternative 3' UTR
ENST00000643890.1	CAGE supported TSS
ENST00000643890.1	alternative 5' UTR
ENST00000662574.1	Assembled from SLRseq reads (SRP049776)
ENST00000665945.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662401.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670477.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452933.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666633.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666633.1	putative novel transcript
ENST00000658245.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659347.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000414743.6	novel transcript
ENST00000652987.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661792.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438327.2	novel transcript
ENST00000435156.1	putative novel transcript
ENST00000429803.1	ribosomal protein L31 (RPL31) pseudogene
ENST00000452014.1	transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) (TCEB1) pseudogene
ENST00000377208.7	CAGE supported TSS
ENST00000377208.7	MANE_select
ENST00000282003.7	MANE_select
ENST00000282003.7	novel protein (contains FLJ13449, possible ortholog of mouse 2810449K13Rik protein)
ENST00000418453.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000667185.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671423.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667073.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653901.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658469.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670423.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666610.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446391.1	novel transcript
ENST00000655539.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654452.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000400121.2	heat shock 60kDa protein 1 (chaperonin) (HSPD1) pseudogene
ENST00000432974.1	chaperonin containing TCP1, subunit 5 (epsilon) (KIAA0098) (CCT5) pseudogene
ENST00000416374.1	breast carcinoma amplified sequence 2 (DAM1, BCAS2) pseudogene
ENST00000438737.3	MANE_select
ENST00000654024.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654024.1	Assembled from SLRseq reads (SRP049776)
ENST00000656910.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656024.1	Assembled from SLRseq reads (SRP049776)
ENST00000664699.1	Assembled from SLRseq reads (SRP049776)
ENST00000456602.5	novel transcript
ENST00000606584.6	Assembled from SLRseq reads (SRP049776)
ENST00000457171.1	novel transcript
ENST00000650134.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000487865.5	CAGE supported TSS
ENST00000620924.1	CAGE supported TSS
ENST00000661483.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000620874.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000450187.2	putative novel transcript
ENST00000648202.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000457858.1	putative novel transcript
ENST00000427918.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000427918.2	novel transcript
ENST00000667673.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658610.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663622.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657824.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661565.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667336.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660928.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000648514.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000666462.1	Assembled from SLRseq reads (SRP049776)
ENST00000664333.1	Assembled from SLRseq reads (SRP049776)
ENST00000640346.1	non canonical U12
ENST00000647704.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000377102.5	alternative 5' UTR
ENST00000377102.5	alternatively splice 5' UTR, shares CDS with bA506P24.1.1
ENST00000377104.4	MANE_select
ENST00000448627.1	heterogeneous nuclear ribonucleoprotein A1 (HNRPA1) pseudogene
ENST00000429776.2	novel pseudogene (KIAA1935, FLJ31359)
ENST00000665186.1	Assembled from SLRseq reads (SRP049776)
ENST00000669091.1	Assembled from SLRseq reads (SRP049776)
ENST00000660876.1	Assembled from SLRseq reads (SRP049776)
ENST00000661648.1	Assembled from SLRseq reads (SRP049776)
ENST00000667488.1	Assembled from SLRseq reads (SRP049776)
ENST00000655229.1	Assembled from SLRseq reads (SRP049776)
ENST00000654491.1	Assembled from SLRseq reads (SRP049776)
ENST00000439608.1	ADP-ribosylation factor pseudogene
ENST00000663284.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456588.1	putative novel transcript
ENST00000458480.2	QC splicing correct
ENST00000458480.2	novel transcript
ENST00000446367.1	novel pseudogene (HIG1)
ENST00000663739.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000426437.1	glycogenin (GYG) pseudogene
ENST00000657985.1	Assembled from SLRseq reads (SRP049776)
ENST00000674365.1	MANE_select
ENST00000667130.1	Assembled from SLRseq reads (SRP049776)
ENST00000649183.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000654693.1	Assembled from SLRseq reads (SRP049776)
ENST00000399480.2	homeobox protein pseudogene
ENST00000670170.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000441973.1	ubiquitin-conjugating enzyme pseudogene
ENST00000650504.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000653443.1	Assembled from SLRseq reads (SRP049776)
ENST00000654433.1	Assembled from SLRseq reads (SRP049776)
ENST00000457501.1	NADH dehydrogense pseudogene
ENST00000438536.1	NADH dehydrogense pseudogene
ENST00000446314.1	novel transcript
ENST00000656194.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668831.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000433074.1	novel transcript
ENST00000656022.1	Assembled from RACEseq reads
ENST00000424926.2	novel transcript
ENST00000655792.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647840.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000647374.2	CAGE supported TSS
ENST00000647374.2	LR annotation
ENST00000647374.2	MANE_select
ENST00000643778.1	alternative 5' UTR
ENST00000430903.1	novel pseudogene
ENST00000445967.1	QC splicing correct
ENST00000445967.1	novel transcript
ENST00000619520.1	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 6 (RNA helicase, 54kDa) (DDX6) pseudogene
ENST00000666285.1	Assembled from SLRseq reads (SRP049776)
ENST00000429528.1	thioredoxin-like, 32kDa (TXNL) pseudogene
ENST00000446970.1	ubiquitin pseudogene
ENST00000445283.1	RNA-binding protein LIN-28 pseudogene
ENST00000647785.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000658487.1	Assembled from SLRseq reads (SRP049776)
ENST00000656150.1	Assembled from SLRseq reads (SRP049776)
ENST00000668840.1	Assembled from RACEseq reads
ENST00000667327.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667327.1	Assembled from SLRseq reads (SRP049776)
ENST00000662489.1	Assembled from SLRseq reads (SRP049776)
ENST00000658012.1	Assembled from SLRseq reads (SRP049776)
ENST00000668695.1	Assembled from SLRseq reads (SRP049776)
ENST00000441617.6	Assembled from SLRseq reads (SRP049776)
ENST00000668242.1	Assembled from SLRseq reads (SRP049776)
ENST00000658270.1	Assembled from SLRseq reads (SRP049776)
ENST00000660424.1	Assembled from SLRseq reads (SRP049776)
ENST00000656584.1	Assembled from SLRseq reads (SRP049776)
ENST00000668555.1	Assembled from SLRseq reads (SRP049776)
ENST00000654568.1	Assembled from SLRseq reads (SRP049776)
ENST00000606590.2	Assembled from SLRseq reads (SRP049776)
ENST00000422074.2	novel transcript
ENST00000606785.1	not organism-supported
ENST00000426627.1	novel pseudogene (KIAA1676)
ENST00000649072.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000658219.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653293.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000424165.1	novel transcript
ENST00000448425.1	novel transcript
ENST00000662407.1	Assembled from SLRseq reads (SRP049776)
ENST00000453145.1	GrpE-like, mitochondrial (E. coli) (Grpel) pseudogene
ENST00000661729.1	Assembled from SLRseq reads (SRP049776)
ENST00000653072.1	Assembled from SLRseq reads (SRP049776)
ENST00000446579.1	putative novel transcript
ENST00000415193.5	QC splicing correct
ENST00000415193.5	novel transcript
ENST00000445027.2	novel transcript
ENST00000432350.1	novel RING finger protein pseudogene
ENST00000414049.1	Sp3 transcription factor (SP3) pseudogene
ENST00000659314.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000670662.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425048.1	putative novel transcript
ENST00000435401.1	novel transcript
ENST00000448259.1	ribosomal protein L7 (RPL7) pseudogene
ENST00000400284.2	peroxisomal biogenesis factor 12 (PEX12) pseudogene
ENST00000654320.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653351.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647679.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000660628.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662619.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427733.1	keratin 18 (KRT18) (K18, CYK18) pseudogene
ENST00000426840.1	novel transcript
ENST00000419272.1	novel transcript
ENST00000442875.1	novel pseudogene
ENST00000442478.1	putative novel protein
ENST00000427717.1	novel transcript
ENST00000438789.1	novel transcript
ENST00000420099.1	peptidylprolyl isomerase (cyclophilin) pseudogene
ENST00000659898.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664987.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000377067.9	MANE_select
ENST00000417589.1	putative novel transcript
ENST00000656007.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000416664.1	putative novel transcript
ENST00000662499.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419288.1	novel transcript
ENST00000660073.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000443228.1	putative novel transcript
ENST00000658522.1	Assembled from SLRseq reads (SRP049776)
ENST00000377047.9	MANE_select
ENST00000657026.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426409.2	heterogeneous nuclear ribonucleoprotein A2/B1 (HNRPA2B1) pseudogene
ENST00000445540.1	novel transcript
ENST00000436329.2	novel transcript
ENST00000377028.10	MANE_select
ENST00000483392.6	dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)(TYRP2)
ENST00000490854.1	dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)(TYRP2)
ENST00000261296.7	MANE_select
ENST00000376958.5	MANE_select
ENST00000670861.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000433569.1	QC splicing correct
ENST00000433569.1	novel transcript
ENST00000665450.1	Assembled from SLRseq reads (SRP049776)
ENST00000376945.4	MANE_select
ENST00000299197.6	bromodomain containing 7 (BP75, NAG4, CELTIX1) (BRD7) pseudogene
ENST00000434403.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000669430.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000645237.2	LR annotation
ENST00000645237.2	MANE_select
ENST00000646439.1	NP_001288758.1
ENST00000484109.1	ATP-binding cassette, sub-family C (CFTR/MRP), member 4
ENST00000629385.1	NP_001098985.1
ENST00000299339.3	MANE_select
ENST00000376855.1	claudin 10 (OSP-L, CPETRL3)
ENST00000416909.1	QC splicing correct
ENST00000416909.1	novel transcript-by initial annotator
ENST00000376829.7	MANE_select
ENST00000662244.1	Assembled from SLRseq reads (SRP049776)
ENST00000671463.1	Assembled from SLRseq reads (SRP049776)
ENST00000602402.6	MANE_select
ENST00000442927.1	pseudogene similar to part of NADH dehydrogenase 5 (MTND5)
ENST00000439477.1	NADH dehydrogenase 6 (MTND6) pseudogene
ENST00000445588.2	novel cytochrome B pseudogene
ENST00000376747.8	MANE_select
ENST00000462472.1	UDP-glucose ceramide glucosyltransferase-like 2 (HUGT2, FLJ10873, FLJ11485)
ENST00000462472.1	this variant and variants 4 and 5 could be part of the same variant
ENST00000476866.5	UDP-glucose ceramide glucosyltransferase-like 2 (HUGT2, FLJ10873, FLJ11485)
ENST00000476866.5	this variant and variants 3 and 5 could be part of the same variant
ENST00000491509.5	this variant and variants 3 and 4 could be part of the same variant
ENST00000412282.1	high-mobility group nucleosome binding domain 1 (HMGN1) pseudogene
ENST00000376705.4	MANE_select
ENST00000415152.1	Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region, gene 1 (AMMECR1) pseudogene
ENST00000426420.1	heat shock 90kDa protein 1, beta (HSPCB) pseudogene
ENST00000453253.1	tubby like protein 3 (TULP3) pseudogene
ENST00000543457.5	alternative 5' UTR
ENST00000541518.5	alternative 5' UTR
ENST00000541038.1	alternative 5' UTR
ENST00000657031.1	Assembled from SLRseq reads (SRP049776)
ENST00000453862.1	putative novel transcript
ENST00000679496.1	MANE_select
ENST00000679496.1	NM_001382683.1
ENST00000679496.1	align_id:3581460|asmbl_71625
ENST00000665007.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659310.1	Assembled from SLRseq reads (SRP049776)
ENST00000662529.1	Assembled from SLRseq reads (SRP049776)
ENST00000245304.5	MANE_select
ENST00000245304.5	member of RAS oncogene family
ENST00000437334.1	putative novel transcript
ENST00000665508.1	Assembled from SLRseq reads (SRP049776)
ENST00000443410.1	60S ribosomal protein L7A (RPL7A) pseudogene
ENST00000460070.6	alternative 5' UTR
ENST00000481455.6	alternative 5' UTR
ENST00000651721.2	MANE_select
ENST00000651721.2	upstream ATG
ENST00000493281.6	alternative 5' UTR
ENST00000463157.6	alternative 5' UTR
ENST00000471898.5	alternative 5' UTR
ENST00000489058.6	alternative 5' UTR
ENST00000481689.6	alternative 5' UTR
ENST00000480611.6	alternative 5' UTR
ENST00000485433.6	alternative 5' UTR
ENST00000496368.6	alternative 5' UTR
ENST00000421861.7	alternative 5' UTR
ENST00000475420.5	alternative 5' UTR
ENST00000490680.5	alternative 5' UTR
ENST00000446770.1	pseudogene similar to part of ferritin, light polypeptide (FTL)
ENST00000319562.11	MANE_select
ENST00000598389.5	alternative 5' UTR
ENST00000595817.5	psl_CRG_5prime_testis_97_98_99
ENST00000457029.3	QC splicing correct
ENST00000267291.7	MANE_select
ENST00000432229.1	novel transcript
ENST00000539966.6	MANE_select
ENST00000376554.8	QC splicing correct
ENST00000376554.8	serine/threonine kinase 24 (STE20 homolog, yeast) (MST3, STK3)
ENST00000491878.5	serine/threonine kinase 24 (STE20 homolog, yeast) (MST3, STK3)
ENST00000481288.1	QC splicing correct
ENST00000481288.1	serine/threonine kinase 24 (STE20 homolog, yeast) (MST3, STK3)
ENST00000434547.1	non canonical TEC
ENST00000401550.2	novel pseudogene
ENST00000451978.2	cytochrome c pseudogene
ENST00000430810.1	calmodulin 2 (CALM2) (phosphorylase kinase, delta) pseudogene
ENST00000376503.10	MANE_select
ENST00000340449.7	zizimin1
ENST00000481051.1	zizimin1
ENST00000472874.1	zizimin1
ENST00000473165.1	zizimin1
ENST00000479769.1	zizimin1
ENST00000439367.1	putative novel transcript
ENST00000417594.2	ribosomal protein L7 (RPL7) pseudogene
ENST00000413224.1	ribosomal protein S6 (RPS6) pseudogene
ENST00000671580.1	Assembled from SLRseq reads (SRP049776)
ENST00000668596.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662755.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658188.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000426037.6	novel transcript
ENST00000445737.2	novel transcript
ENST00000668873.1	Assembled from SLRseq reads (SRP049776)
ENST00000491037.1	pseudogene similar to part of glyceraldehyde-3-phosphate dehydrogenase (GAPD)
ENST00000355700.9	novel protein
ENST00000403766.8	MANE_select
ENST00000468067.5	novel transcript
ENST00000473091.5	novel transcript
ENST00000376440.6	FLJ30001
ENST00000394213.2	H2A histone family pseudogene
ENST00000340807.3	G protein-coupled receptor 18
ENST00000397470.5	CAGE supported TSS
ENST00000397470.5	MANE_select
ENST00000397470.5	alternative 5' UTR
ENST00000397473.7	CAGE supported TSS
ENST00000397473.7	alternative 5' UTR
ENST00000416594.2	G protein-coupled receptor 18
ENST00000416594.2	alternative 5' UTR
ENST00000376414.5	MANE_select
ENST00000428776.1	high mobility group protein pseudogene
ENST00000642991.1	CAGE supported TSS
ENST00000646895.1	CAGE supported TSS
ENST00000376387.5	CAGE supported TSS
ENST00000376387.5	MANE_select
ENST00000466555.1	transmembrane 9 superfamily member 2 (P76)
ENST00000656995.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656995.1	Assembled from SLRseq reads (SRP049776)
ENST00000366259.2	putative novel transcript
ENST00000437113.2	QC splicing correct
ENST00000436148.1	cofilin 1 (non-muscle) (CFL1) pseudogene
ENST00000654441.1	Assembled from SLRseq reads (SRP049776)
ENST00000376355.7	citrate lyase beta like (CLB, bA134O15.1)
ENST00000376354.5	citrate lyase beta like (CLB, bA134O15.1)
ENST00000339105.8	citrate lyase beta like (CLB, bA134O15.1)
ENST00000416504.5	citrate lyase beta like (CLB, bA134O15.1)
ENST00000443887.1	citrate lyase beta like (CLB, bA134O15.1)
ENST00000419700.1	citrate lyase beta like (CLB, bA134O15.1)
ENST00000425186.2	QC splicing correct
ENST00000425186.2	citrate lyase beta like (CLB, bA134O15.1)
ENST00000430125.1	putative novel transcript
ENST00000670609.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000416009.2	putative novel transcript
ENST00000670400.1	Assembled from SLRseq reads (SRP049776)
ENST00000670575.1	Assembled from SLRseq reads (SRP049776)
ENST00000658325.1	Assembled from SLRseq reads (SRP049776)
ENST00000661077.1	Assembled from SLRseq reads (SRP049776)
ENST00000659729.1	Assembled from SLRseq reads (SRP049776)
ENST00000656974.1	Assembled from SLRseq reads (SRP049776)
ENST00000660452.1	Assembled from SLRseq reads (SRP049776)
ENST00000671519.1	Assembled from SLRseq reads (SRP049776)
ENST00000653776.1	Assembled from SLRseq reads (SRP049776)
ENST00000376335.8	MANE_select
ENST00000376335.8	as
ENST00000490085.5	Zic family member 2 (odd-paired homolog, Drosophila)
ENST00000490085.5	this variant and variant 3 could be part of the same variant
ENST00000468291.1	Zic family member 2 (odd-paired homolog, Drosophila)
ENST00000468291.1	this variant and variant 3 could be part of the same variant
ENST00000477213.1	Zic family member 2 (odd-paired homolog, Drosophila)
ENST00000481565.1	Zic family member 2 (odd-paired homolog, Drosophila)
ENST00000481565.1	this variant and variants 2 and 3 could be part of the same variant
ENST00000455914.1	13kDa differentiation-associated protein (DAP13) pseudogene
ENST00000654763.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000451989.1	asparagine synthetase (ASNS) pseudogene
ENST00000376285.6	MANE_select
ENST00000485946.1	propionyl Coenzyme A carboxylase, alpha polypeptide
ENST00000428969.1	propionyl Coenzyme A carboxylase, alpha polypeptide
ENST00000432924.2	ribosomal protein L15 (RPL15) pseudogene
ENST00000654085.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000451662.1	QC splicing correct
ENST00000451662.1	novel transcript
ENST00000455958.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000455958.6	novel transcript
ENST00000414553.1	novel transcript
ENST00000467518.5	alternative 5' UTR
ENST00000492399.5	alternative 5' UTR
ENST00000464500.5	alternative 5' UTR
ENST00000471912.1	alternative 5' UTR
ENST00000342624.10	MANE_select
ENST00000342624.10	NP_116202.2
ENST00000462211.5	this variant and variant's 4 and 5 could be part of the same variant
ENST00000478272.1	this variant and variant's 4, 5 and 8 could be part of the same variant
ENST00000496511.1	this variant and variant's 4, 5 and 8 could be part of the same variant
ENST00000475272.1	alternative 5' UTR
ENST00000454311.1	COX5B (cytochrome c oxidase subunit Vb) pseudogene
ENST00000457843.1	novel transcript (FLJ22153)
ENST00000397387.2	ADP-ribosylation factor pseudogene
ENST00000436722.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657351.1	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000251127.11	MANE_select
ENST00000648359.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000376180.8	MANE_select
ENST00000474233.1	integrin, beta-like 1 (with EGF-like repeat domains)
ENST00000376143.5	MANE_select
ENST00000468052.1	fibroblast growth factor 14
ENST00000400214.2	high-mobility group box 1 (HMGB1) pseudogene
ENST00000415870.1	lipoyltransferase (LOC51601) pseudogene
ENST00000447779.1	ribosomal protein L39 (RPL39) pseudogene
ENST00000437115.2	novel transcript
ENST00000444686.1	putative novel transcript
ENST00000451630.1	putative novel transcript
ENST00000376052.5	CAGE supported TSS
ENST00000376052.5	LR annotation
ENST00000376052.5	MANE_select
ENST00000496126.1	tripeptidyl peptidase II
ENST00000493770.2	tripeptidyl peptidase II
ENST00000490420.1	tripeptidyl peptidase II
ENST00000650757.1	CAGE supported TSS
ENST00000482393.1	NMD likely if extended
ENST00000482393.1	tripeptidyl peptidase II
ENST00000267273.6	novel protein
ENST00000322527.4	MANE_select
ENST00000430111.1	QC splicing correct
ENST00000430111.1	putative novel transcript
ENST00000660220.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000376032.9	MANE_select
ENST00000376027.5	QC splicing correct
ENST00000376019.5	alternative 5' UTR
ENST00000376022.5	novel protein
ENST00000376004.5	MANE_select
ENST00000484943.2	QC splicing correct
ENST00000639435.1	NP_001191354.1
ENST00000639435.1	non canonical U12
ENST00000639132.1	non canonical U12
ENST00000257336.6	MANE_select
ENST00000651855.1	NMD likely if extended
ENST00000448849.3	alternative 5' UTR
ENST00000491929.1	basic, immunoglobulin-like variable motif containing
ENST00000652084.1	alternative 5' UTR
ENST00000481069.1	basic, immunoglobulin-like variable motif containing
ENST00000535557.5	NMD likely if extended
ENST00000652225.2	LR annotation
ENST00000652225.2	MANE_select
ENST00000652225.2	non canonical U12
ENST00000652225.2	non canonical conserved
ENST00000472151.1	excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))
ENST00000375958.3	excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))
ENST00000375954.1	excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))
ENST00000375954.1	non canonical U12
ENST00000481099.1	excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))
ENST00000472247.1	excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))
ENST00000613439.1	CAGE supported TSS
ENST00000245312.5	MANE_select
ENST00000648788.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000667000.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000444795.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000444795.2	putative novel transcript
ENST00000415853.1	ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G variant 1 (ATP6V1G1) pseudogene
ENST00000670156.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000455851.1	ribosomal protein L7 (RPL7) pseudogene
ENST00000652772.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000600388.5	alternative 5' UTR
ENST00000375936.8	NMD exception
ENST00000329625.9	NP_001155286.1
ENST00000595812.2	NMD exception
ENST00000471432.3	non canonical TEC
ENST00000599179.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667582.1	Assembled from SLRseq reads (SRP049776)
ENST00000671026.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000596398.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656290.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000601607.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663594.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667429.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653178.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660821.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000598478.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667492.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669807.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655625.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671060.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653504.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659258.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656920.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670771.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655201.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670433.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668581.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667217.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668362.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608426.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663744.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659016.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665309.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670977.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670308.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660236.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665747.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665747.1	novel transcript
ENST00000669706.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656267.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655741.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663287.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661872.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661872.1	Assembled from SLRseq reads (SRP049776)
ENST00000658308.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660976.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661301.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667685.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669887.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670555.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661817.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663761.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666948.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666948.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000670430.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666696.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658024.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668272.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667987.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663045.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659909.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662500.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660294.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660560.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658711.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654132.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658095.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655062.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667106.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664201.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669675.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669035.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671053.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666322.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656646.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661079.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658692.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658169.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664522.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669540.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659496.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664695.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669655.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663194.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655448.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671561.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668396.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663969.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656539.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657599.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653600.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668939.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000599264.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671516.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669144.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654086.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654904.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669959.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661976.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669507.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659165.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654352.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669886.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654919.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655173.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666040.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664140.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670114.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656615.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670530.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670821.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670303.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664090.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669264.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670546.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661782.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656479.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664796.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668080.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671402.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669497.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668279.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653082.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657690.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655206.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000415294.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657324.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669840.1	Assembled from SLRseq reads (SRP049776)
ENST00000670429.1	Assembled from SLRseq reads (SRP049776)
ENST00000658151.1	Assembled from SLRseq reads (SRP049776)
ENST00000667534.1	Assembled from SLRseq reads (SRP049776)
ENST00000668966.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000598229.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608220.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608624.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662776.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666723.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000414368.2	nested 454 RNA-Seq supported
ENST00000670458.1	Assembled from SLRseq reads (SRP049776)
ENST00000657278.1	Assembled from SLRseq reads (SRP049776)
ENST00000669705.1	Assembled from SLRseq reads (SRP049776)
ENST00000642946.1	novel transcript
ENST00000435024.2	novel transcript
ENST00000444865.2	novel transcript
ENST00000446059.1	ribosomal protein L35 (RPL35) pseudogene
ENST00000646441.1	LR annotation
ENST00000646441.1	MANE_select
ENST00000649449.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000666523.1	Assembled from SLRseq reads (SRP049776)
ENST00000400198.8	MANE_select
ENST00000400198.8	novel protein (FLJ10154)
ENST00000375926.5	novel protein
ENST00000360629.3	NMD likely if extended
ENST00000360629.3	novel protein
ENST00000653952.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665026.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667614.1	Assembled from SLRseq reads (SRP049776)
ENST00000663663.1	Assembled from SLRseq reads (SRP049776)
ENST00000661468.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658356.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000421601.2	novel transcript
ENST00000664222.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656762.1	Assembled from SLRseq reads (SRP049776)
ENST00000429024.1	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c pseudogene
ENST00000664543.1	Assembled from SLRseq reads (SRP049776)
ENST00000648448.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000375915.4	MANE_select
ENST00000449551.1	putative novel transcript
ENST00000663056.1	Assembled from SLRseq reads (SRP049776)
ENST00000611712.4	QC splicing correct
ENST00000405925.2	alternative 5' UTR
ENST00000442234.6	MANE_select
ENST00000442234.6	alternative 5' UTR
ENST00000375898.4	MANE_select
ENST00000375898.4	novel protein (FLJ14906)
ENST00000486502.1	tumor necrosis factor (ligand) superfamily, member 13b
ENST00000375887.9	MANE_select
ENST00000479435.1	tumor necrosis factor (ligand) superfamily, member 13b
ENST00000493765.1	tumor necrosis factor (ligand) superfamily, member 13b
ENST00000637731.1	non canonical polymorphism
ENST00000392864.2	pseudogene similar to part of host cell factor 2 (HCF-2)
ENST00000251041.10	novel protein (KIAA0865), possible ortholog of rat myosin heavy chain Myr 8 (Loc192253)
ENST00000251041.10	novel protein (including KIAA0865), possible ortholog of rat myosin heavy chain Myr 8 (Loc192253)
ENST00000457511.7	MANE_select
ENST00000467639.1	novel transcript
ENST00000375857.6	novel protein (KIAA0865), possible ortholog of rat myosin heavy chain Myr 8 (Loc192253)
ENST00000375857.6	novel protein (including KIAA0865), possible ortholog of rat myosin heavy chain Myr 8 (Loc192253)
ENST00000482793.1	novel transcript
ENST00000412809.1	putative novel transcript
ENST00000439299.1	QC splicing correct
ENST00000439299.1	novel transcript
ENST00000649017.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000455487.1	putative novel transcript
ENST00000648154.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000432575.1	putative novel transcript
ENST00000439008.1	putative novel transcript
ENST00000650264.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000416090.1	QC splicing correct
ENST00000416090.1	novel transcript
ENST00000375856.5	MANE_select
ENST00000615635.1	CAGE supported TSS
ENST00000666014.1	Assembled from SLRseq reads (SRP049776)
ENST00000667832.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658519.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654209.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662389.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660081.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659867.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657447.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654849.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669022.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659060.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670698.1	Assembled from SLRseq reads (SRP049776)
ENST00000411690.2	QC splicing correct
ENST00000411690.2	novel transcript
ENST00000671547.1	Assembled from SLRseq reads (SRP049776)
ENST00000375820.10	MANE_select
ENST00000543140.6	NP_001290039.1
ENST00000615732.2	CAGE supported TSS
ENST00000400163.7	alternative 5' UTR
ENST00000360467.7	MANE_select
ENST00000360467.7	NP_001837.2
ENST00000463084.1	collagen type IV alpha 2
ENST00000417970.2	QC splicing correct
ENST00000267328.5	MANE_select
ENST00000611744.1	CAGE supported TSS
ENST00000680254.1	CAGE supported TSS
ENST00000680254.1	MANE_select
ENST00000470164.2	QC splicing correct
ENST00000470164.2	novel transcript (FLJ14198)
ENST00000309957.3	FLJ10769
ENST00000309957.3	upstream ATG
ENST00000257347.9	MANE_select
ENST00000471986.2	QC splicing correct
ENST00000471986.2	novel transcript
ENST00000480437.5	novel transcript
ENST00000465145.5	novel transcript similar to cysteinyl-TRNA syntetase
ENST00000338450.7	Inhibitor of growth family member 1
ENST00000333219.9	Inhibitor of growth family member 1
ENST00000333219.9	MANE_select
ENST00000464141.1	Inhibitor of growth family member 1
ENST00000411449.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000267339.6	FLJ20093
ENST00000267339.6	MANE_select
ENST00000485844.1	novel transcript
ENST00000620246.1	CAGE supported TSS
ENST00000413631.1	ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase) (ADPRT) pseudogene
ENST00000440735.2	putative novel transcript
ENST00000422994.1	novel transcript
ENST00000664746.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000317133.9	NP_663788.1
ENST00000449979.5	alternative 5' UTR
ENST00000449979.5	alternatively spliced 5' UTR, shares CDS with bA17E4.1.1
ENST00000491775.5	alternative 5' UTR
ENST00000466143.5	alternative 5' UTR
ENST00000218789.9	QC splicing correct
ENST00000467053.5	alternative 5' UTR
ENST00000426073.6	alternative 5' UTR
ENST00000491688.1	Rho guanine nucleotide exchange factor (GEF) 7 (KIAA0142)
ENST00000423329.1	putative novel transcript
ENST00000435037.1	putative novel transcript
ENST00000650324.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000283547.2	MANE_select
ENST00000663211.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662993.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655071.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670855.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655663.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670406.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668961.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661311.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440860.1	putative novel transcript
ENST00000412119.1	putative novel transcript
ENST00000664504.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663025.1	Assembled from SLRseq reads (SRP049776)
ENST00000662534.1	Assembled from SLRseq reads (SRP049776)
ENST00000658904.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000666176.1	Assembled from SLRseq reads (SRP049776)
ENST00000671024.1	Assembled from SLRseq reads (SRP049776)
ENST00000657728.1	Assembled from SLRseq reads (SRP049776)
ENST00000653135.1	Assembled from SLRseq reads (SRP049776)
ENST00000421423.1	putative novel transcript
ENST00000330949.3	MANE_select
ENST00000418660.1	putative novel transcript
ENST00000668240.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413637.1	novel transcript
ENST00000283550.8	MANE_select
ENST00000261965.8	MANE_select
ENST00000649778.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000469302.1	tubulin, gamma complex associated protein 3 (GCP3, SPC98P, Spc98p, spindle pole body protein)
ENST00000462580.1	this variant and variant fragment bA88E10.1.4 could be part of one single variant
ENST00000462580.1	tubulin, gamma complex associated protein 3 (GCP3, SPC98P, Spc98p, spindle pole body protein)
ENST00000483532.1	tubulin, gamma complex associated protein 3 (GCP3, SPC98P, Spc98p, spindle pole body protein)
ENST00000613809.1	CAGE supported TSS
ENST00000623100.2	FLJ26443
ENST00000612143.1	CAGE supported TSS
ENST00000489577.1	QC splicing correct
ENST00000375608.7	cDNAs are from orang-utan and mouse
ENST00000535094.7	MANE_select
ENST00000535094.7	MCF.2 cell line derived transforming sequence-like (KIAA0362, DBS, OST, ARHGEF14)
ENST00000535094.7	NP_001112732.2
ENST00000397024.1	QC splicing correct
ENST00000486806.1	MCF.2 cell line derived transforming sequence-like (KIAA0362, DBS, OST, ARHGEF14)
ENST00000480321.1	QC splicing correct
ENST00000397021.5	MCF.2 cell line derived transforming sequence-like (KIAA0362, DBS, OST, ARHGEF14)
ENST00000464800.5	MCF.2 cell line derived transforming sequence-like (KIAA0362, DBS, OST, ARHGEF14)
ENST00000413354.5	GENCODE experimental pipeline
ENST00000453297.5	QC splicing correct
ENST00000439475.1	QC splicing correct
ENST00000441756.1	MCF.2 cell line derived transforming sequence-like (MCF2L)(DBS, OST, ARHGEF14, KIAA0362)
ENST00000346342.8	MANE_select
ENST00000375559.8	MANE_select
ENST00000375547.7	MANE_select
ENST00000493630.1	protein Z, vitamin K-dependent plasma glycoprotein (PROZ)(PZ)
ENST00000337344.9	MANE_select
ENST00000337344.9	QC splicing correct
ENST00000337344.9	alternative 3' UTR
ENST00000337344.9	alternatively spliced 3' UTR; shares CDS with bA98F14.6.4 and bA98F14.6.6
ENST00000337344.9	non canonical U12
ENST00000375477.5	QC splicing correct
ENST00000375477.5	alternative 3' UTR
ENST00000375477.5	alternatively spliced 3' UTR; shares CDS with bA98F14.6.2 and bA98F14.6.4
ENST00000375477.5	non canonical U12
ENST00000375479.6	QC splicing correct
ENST00000375479.6	alternative 3' UTR
ENST00000375479.6	alternatively spliced 3' UTR; shares CDS with bA98F14.6.2 and bA98F14.6.6
ENST00000375479.6	non canonical U12
ENST00000375459.5	QC splicing correct
ENST00000375459.5	alternative 3' UTR
ENST00000375459.5	alternatively spliced 3' UTR; shares CDS with bA98F14.6.5
ENST00000375459.5	non canonical U12
ENST00000246505.9	novel protein (FLJ11305)
ENST00000375457.2	QC splicing correct
ENST00000375457.2	alternative 3' UTR
ENST00000375457.2	alternatively spliced 3' UTR; shares CDS with bA98F14.6.7
ENST00000375457.2	non canonical U12
ENST00000475433.5	QC splicing correct
ENST00000475433.5	non canonical U12
ENST00000480971.5	QC splicing correct
ENST00000480971.5	non canonical U12
ENST00000484641.6	non canonical TEC
ENST00000484641.6	non canonical U12
ENST00000491548.5	QC splicing correct
ENST00000491548.5	non canonical U12
ENST00000462853.1	QC splicing correct
ENST00000462853.1	non canonical U12
ENST00000375440.9	AT/AC splice between exons three and four
ENST00000375440.9	MANE_select
ENST00000474116.5	cullin 4A (CUL4A)
ENST00000494985.5	cullin 4A (CUL4A)
ENST00000494985.5	non canonical TEC
ENST00000498562.2	cullin 4A (CUL4A)
ENST00000470067.5	cullin 4A (CUL4A)
ENST00000472083.1	cullin 4A (CUL4A)
ENST00000455730.2	LDHB (lactate dehydrogenase B) pseudogene
ENST00000332556.5	MANE_select
ENST00000332556.5	lysosomal-associated membrane protein 1 (LAMP1)
ENST00000471046.1	lysosomal-associated membrane protein 1 (LAMP1)
ENST00000375431.9	MANE_select
ENST00000326039.3	FLJ22474
ENST00000669000.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419199.1	putative novel transcript
ENST00000423246.1	QC splicing correct
ENST00000423246.1	putative novel transcript
ENST00000413169.2	alternative 5' UTR
ENST00000413169.2	alternatively spliced 5' UTR; shares partial CDS with bA102K13.1.1
ENST00000478244.6	MANE_select
ENST00000465938.5	alternative 5' UTR
ENST00000460318.1	novel transcript
ENST00000439909.2	QC splicing correct
ENST00000465710.1	alternative 5' UTR
ENST00000453584.1	QC splicing correct
ENST00000434316.7	MANE_select
ENST00000375391.5	QC splicing correct
ENST00000375391.5	non canonical TEC
ENST00000465556.1	=
ENST00000475254.5	transcription factor Dp-1 (DP-1, DRTF1)
ENST00000375370.10	MANE_select
ENST00000408980.6	alternative 5' UTR
ENST00000408980.6	alternatively spliced 5' UTR, shares CDS with bA230F18.4.1 (not complete)
ENST00000453989.2	alternative 5' UTR
ENST00000453989.2	alternatively spliced 5' UTR, shares CDS with bA230F18.4.1 (not complete)
ENST00000494812.1	transcription factor Dp-1 (DP-1, DRTF1)
ENST00000335288.5	MANE_select
ENST00000375353.5	MANE_select
ENST00000480426.5	FLJ34709
ENST00000327773.7	MANE_select
ENST00000669254.1	Assembled from SLRseq reads (SRP049776)
ENST00000655351.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648342.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000430978.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000430978.7	QC splicing correct
ENST00000442500.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661456.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000609861.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671045.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000610194.1	nested 454 RNA-Seq supported
ENST00000425483.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655130.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657154.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666964.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671032.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000562710.2	Called SWINGN in PMID:32071317
ENST00000334062.8	MANE_select
ENST00000334062.8	RAS p21 protein activator (GTPase activating protein) 3 (Ins(1,3,4,5)P4-binding protein) (GAP1IP4BP)
ENST00000454005.1	putative novel transcript
ENST00000643687.1	CAGE supported TSS
ENST00000635901.2	CAGE supported TSS
ENST00000635901.2	NAGNAG splice site
ENST00000636692.1	NAGNAG splice site
ENST00000356221.8	MANE_select
ENST00000356221.8	Three base difference in splice acceptor of exon three compared to RP11-569D9.4-006
ENST00000650489.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000252457.9	Three base difference in splice acceptor of exon three compared to RP11-569D9.4-009
ENST00000494581.1	CDC16 cell division cycle 16 homolog (S. cerevisiae)
ENST00000461716.1	QC splicing correct
ENST00000649577.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000375299.8	MANE_select
ENST00000484246.5	novel transcript
ENST00000480362.5	novel transcript
ENST00000474056.5	novel transcript
ENST00000481131.5	novel transcript
ENST00000479712.1	novel transcript
ENST00000392050.2	Charot-Leyden crystal protein (CLC) pseudogene
ENST00000463003.2	NAGNAG splice site
ENST00000463003.2	alternative 5' UTR
ENST00000645174.1	alternative 5' UTR
ENST00000361283.4	MANE_select
ENST00000644294.1	alternative 5' UTR
ENST00000643483.1	alternative 5' UTR
ENST00000446989.1	novel transcript
ENST00000623391.1	prediction only
ENST00000623199.1	prediction only
ENST00000547889.6	MANE_select
ENST00000611785.1	QC splicing correct
ENST00000551932.1	TEC
ENST00000551932.1	confirm experimentally
ENST00000359695.4	annotation based on Human Olfactory Data Explorer http://genome.weizmann.ac.il/horde/
ENST00000620186.4	QC splicing correct
ENST00000547848.5	MANE_select
ENST00000547848.5	NP_001138914.1
ENST00000547848.5	not best-in-genome evidence
ENST00000622767.4	not best-in-genome evidence
ENST00000547722.1	QC splicing correct
ENST00000547722.1	not best-in-genome evidence
ENST00000557414.1	alternative 5' UTR
ENST00000557677.3	MANE_select
ENST00000641240.1	ENA ID EGAS00001001486
ENST00000641240.1	alternative 5' UTR
ENST00000315947.1	annotation based on Human Olfactory Data Explorer http://genome.weizmann.ac.il/horde/
ENST00000553311.1	annotation based on Human Olfactory Data Explorer http://genome.weizmann.ac.il/horde/
ENST00000642117.2	ENA ID EGAS00001001486
ENST00000556269.1	annotation based on Human Olfactory Data Explorer http://genome.weizmann.ac.il/horde/
ENST00000641808.1	ENA ID EGAS00001001486
ENST00000641200.1	ENA ID EGAS00001001486
ENST00000641200.1	MANE_select
ENST00000641200.1	alternative 5' UTR
ENST00000641705.1	ENA ID EGAS00001001486
ENST00000416478.1	unitary_pseudogene
ENST00000641522.1	ENA ID EGAS00001001486
ENST00000641785.1	ENA ID EGAS00001001486
ENST00000641885.1	ENA ID EGAS00001001486
ENST00000641885.1	MANE_select
ENST00000641885.1	alternative 5' UTR
ENST00000556991.1	annotation based on Human Olfactory Data Explorer http://genome.weizmann.ac.il/horde/
ENST00000641172.1	ENA ID EGAS00001001486
ENST00000641172.1	MANE_select
ENST00000641172.1	alternative 5' UTR
ENST00000641429.1	ENA ID EGAS00001001486
ENST00000641429.1	alternative 5' UTR
ENST00000641135.1	dlogan
ENST00000554603.1	annotated using the Human Olfactory Data Explorer http://genome.weizmann.ac.il/horde/
ENST00000541415.2	NCBI GEO ID GSE80249
ENST00000641793.1	ENA ID EGAS00001001486
ENST00000641793.1	MANE_select
ENST00000641664.1	ENA ID EGAS00001001486
ENST00000641664.1	alternative 5' UTR
ENST00000641904.1	ENA ID EGAS00001001486
ENST00000641904.1	MANE_select
ENST00000554958.1	annotated using the Human Olfactory Data Explorer http://genome.weizmann.ac.il/horde/
ENST00000315683.1	MANE_select
ENST00000554933.1	annotation based on Human Olfactory Data Explorer http://genome.weizmann.ac.il/horde/
ENST00000641386.2	ENA ID EGAS00001001486
ENST00000641633.2	ENA ID EGAS00001001486
ENST00000641633.2	alternative 5' UTR
ENST00000641086.1	ENA ID EGAS00001001486
ENST00000641086.1	MANE_select
ENST00000333629.1	annotation based on Human Olfactory Data Explorer http://genome.weizmann.ac.il/horde/
ENST00000556349.1	LOC100422289
ENST00000556349.1	annotation based on Human Olfactory Data Explorer http://genome.weizmann.ac.il/horde/
ENST00000557042.1	annotation based on Human Olfactory Data Explorer http://genome.weizmann.ac.il/horde/
ENST00000641879.1	ENA ID EGAS00001001486
ENST00000641879.1	alternative 5' UTR
ENST00000641682.1	ENA ID EGAS00001001486
ENST00000641612.1	ENA ID EGAS00001001486
ENST00000315519.3	MANE_select
ENST00000641082.1	ENA ID EGAS00001001486
ENST00000641082.1	MANE_select
ENST00000641082.1	NCBI GEO ID GSE80249
ENST00000641082.1	alternative 5' UTR
ENST00000258821.8	MANE_select
ENST00000398160.6	alternative 5' UTR
ENST00000398169.7	non canonical TEC
ENST00000358932.9	MANE_select
ENST00000358932.9	alternative 5' UTR
ENST00000398163.6	QC splicing correct
ENST00000398163.6	alternative 5' UTR
ENST00000557665.5	alternative 5' UTR
ENST00000553291.5	alternative 5' UTR
ENST00000667399.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000429687.8	MANE_select
ENST00000262715.10	MANE_select
ENST00000556549.1	alternative 5' UTR
ENST00000636854.3	MANE_select
ENST00000206542.9	MANE_select
ENST00000554249.5	alternative 5' UTR
ENST00000555785.2	alternative 5' UTR
ENST00000554699.1	QC splicing correct
ENST00000555414.5	alternative 5' UTR
ENST00000553681.5	alternative 5' UTR
ENST00000557344.5	alternative 5' UTR
ENST00000216714.8	MANE_select
ENST00000398030.8	alternative 5' UTR
ENST00000557181.5	alternative 5' UTR
ENST00000553368.1	alternative 5' UTR
ENST00000556054.5	alternative 5' UTR
ENST00000557054.1	Genoscope mRNA only
ENST00000557054.1	QC splicing correct
ENST00000557150.5	alternative 5' UTR
ENST00000250489.9	MANE_select
ENST00000553418.5	alternative 5' UTR
ENST00000361505.10	MANE_select
ENST00000554678.1	QC splicing correct
ENST00000429244.6	alternative 5' UTR
ENST00000553541.5	alternative 5' UTR
ENST00000554964.5	alternative 5' UTR
ENST00000555230.5	alternative 5' UTR
ENST00000556208.5	alternative 5' UTR
ENST00000557068.5	alternative 5' UTR
ENST00000557209.1	alternative 5' UTR
ENST00000553849.1	alternative 5' UTR
ENST00000555841.5	alternative 5' UTR
ENST00000398008.6	alternative 5' UTR
ENST00000432835.6	NAGNAG splice site
ENST00000432835.6	alternative 5' UTR
ENST00000443456.6	alternative 5' UTR
ENST00000557503.5	alternative 5' UTR
ENST00000557105.5	alternative 5' UTR
ENST00000413502.1	alternative 5' UTR
ENST00000554842.1	alternative 5' UTR
ENST00000671014.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000320704.3	MANE_select
ENST00000397990.5	MANE_select
ENST00000397990.5	alternative 5' UTR
ENST00000555835.3	MANE_select
ENST00000397995.2	alternative 5' UTR
ENST00000555597.1	alternative 5' UTR
ENST00000554286.1	QC splicing correct
ENST00000326842.3	MANE_select
ENST00000326783.4	MANE_select
ENST00000304677.3	MANE_select
ENST00000397967.5	MANE_select
ENST00000340900.3	alternative 5' UTR
ENST00000412779.2	alternative 5' UTR
ENST00000397970.4	alternative 5' UTR
ENST00000554983.1	QC splicing correct
ENST00000658315.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000304625.3	MANE_select
ENST00000339374.11	MANE_select
ENST00000557550.6	Genoscope mRNA only
ENST00000554751.5	alternative 5' UTR
ENST00000555670.1	alternative 5' UTR
ENST00000647921.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000554422.5	NAGNAG splice site
ENST00000298681.5	MANE_select
ENST00000350792.7	alternative 5' UTR
ENST00000555158.5	alternative 5' UTR
ENST00000553503.5	alternative 5' UTR
ENST00000397853.7	alternative 5' UTR
ENST00000556147.5	alternative 5' UTR
ENST00000397851.6	alternative 5' UTR
ENST00000554143.5	alternative 5' UTR
ENST00000553593.5	NMD likely if extended
ENST00000556366.5	alternative 5' UTR
ENST00000553867.5	alternative 5' UTR
ENST00000557169.5	alternative 5' UTR
ENST00000555869.5	alternative 5' UTR
ENST00000555733.5	alternative 5' UTR
ENST00000555384.5	alternative 5' UTR
ENST00000554094.5	alternative 5' UTR
ENST00000553442.5	alternative 5' UTR
ENST00000556420.5	alternative 5' UTR
ENST00000553784.5	alternative 5' UTR
ENST00000557149.5	alternative 5' UTR
ENST00000555142.5	alternative 5' UTR
ENST00000557264.5	alternative 5' UTR
ENST00000557676.5	alternative 5' UTR
ENST00000556924.5	alternative 5' UTR
ENST00000556329.6	alternative 5' UTR
ENST00000554398.5	alternative 5' UTR
ENST00000554472.5	alternative 5' UTR
ENST00000554483.5	alternative 5' UTR
ENST00000555657.5	alternative 5' UTR
ENST00000557274.5	alternative 5' UTR
ENST00000556457.5	alternative 5' UTR
ENST00000556688.5	alternative 5' UTR
ENST00000554561.5	alternative 5' UTR
ENST00000554419.5	alternative 5' UTR
ENST00000554489.5	alternative 5' UTR
ENST00000556561.5	alternative 5' UTR
ENST00000554893.5	alternative 5' UTR
ENST00000554833.5	alternative 5' UTR
ENST00000554415.5	alternative 5' UTR
ENST00000321760.11	MANE_select
ENST00000530140.6	alternative 5' UTR
ENST00000531638.1	QC splicing correct
ENST00000382951.4	MANE_select
ENST00000298690.5	MANE_select
ENST00000308227.2	MANE_select
ENST00000298694.9	MANE_select
ENST00000360947.8	MANE_select
ENST00000451119.6	alternative 5' UTR
ENST00000421093.6	alternative 5' UTR
ENST00000555270.5	alternative 5' UTR
ENST00000556174.5	alternative 5' UTR
ENST00000553296.1	alternative 5' UTR
ENST00000555697.1	alternative 5' UTR
ENST00000641039.1	ENA ID EGAS00001001486
ENST00000641039.1	alternative 5' UTR
ENST00000641697.1	ENA ID EGAS00001001486
ENST00000641697.1	alternative 5' UTR
ENST00000304418.5	MANE_select
ENST00000553300.6	MANE_select
ENST00000430246.6	alternative 5' UTR
ENST00000553753.5	alternative 5' UTR
ENST00000555309.5	NAGNAG splice site
ENST00000557201.5	QC splicing correct
ENST00000557201.5	alternative 5' UTR
ENST00000556897.5	alternative 5' UTR
ENST00000554383.5	alternative 5' UTR
ENST00000555215.5	alternative 5' UTR
ENST00000555137.5	alternative 5' UTR
ENST00000554891.5	alternative 5' UTR
ENST00000556226.5	alternative 5' UTR
ENST00000555176.5	alternative 5' UTR
ENST00000557336.1	alternative 5' UTR
ENST00000557768.1	alternative 5' UTR
ENST00000400017.7	CAGE supported TSS
ENST00000400017.7	MANE_select
ENST00000555587.5	NAGNAG splice site
ENST00000557606.1	NAGNAG splice site
ENST00000216297.7	MANE_select
ENST00000646647.2	MANE_select
ENST00000645929.1	alternative 5' UTR
ENST00000557364.6	alternative 5' UTR
ENST00000643469.1	alternative 5' UTR
ENST00000553870.2	QC splicing correct
ENST00000642518.1	alternative 5' UTR
ENST00000556833.1	not organism-supported
ENST00000397762.6	MANE_select
ENST00000649801.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000416256.5	QC splicing correct
ENST00000448790.7	MANE_select
ENST00000448790.7	genebuild_only_MANE
ENST00000298717.9	MANE_select
ENST00000544248.1	QC splicing correct
ENST00000537235.2	CAGE supported TSS
ENST00000537235.2	LR annotation
ENST00000537235.2	MANE_select
ENST00000535893.1	QC splicing correct
ENST00000641040.1	ENA ID EGAS00001001486
ENST00000641040.1	MANE_select
ENST00000641185.1	ENA ID EGAS00001001486
ENST00000641185.1	alternative 5' UTR
ENST00000641655.1	ENA ID EGAS00001001486
ENST00000542354.1	F
ENST00000542354.1	TRAV1-1*01
ENST00000542433.1	MANE_select
ENST00000390423.2	F
ENST00000390423.2	TRAV1-2*01
ENST00000641524.1	ENA ID EGAS00001001486
ENST00000641524.1	MANE_select
ENST00000641792.1	ENA ID EGAS00001001486
ENST00000641792.1	LOF variant in other haplotypes
ENST00000390424.2	F
ENST00000390424.2	TRAV2*01
ENST00000390425.2	F
ENST00000390425.2	TRAV3*01
ENST00000390426.2	F
ENST00000390426.2	TRAV4*01
ENST00000390427.3	F
ENST00000390427.3	TRAV5*01
ENST00000390428.3	F
ENST00000390428.3	TRAV6*01
ENST00000390429.3	F
ENST00000390429.3	TRAV7*01
ENST00000390430.2	F
ENST00000390430.2	TRAV8-1*01
ENST00000390431.3	F
ENST00000390431.3	TRAV9-1*01
ENST00000390432.2	F
ENST00000390432.2	TRAV10*01
ENST00000539512.1	P
ENST00000539512.1	TRAV11*01
ENST00000390433.1	F
ENST00000390433.1	TRAV12-1*01
ENST00000390434.3	F
ENST00000390434.3	TRAV8-2*01
ENST00000390435.1	F
ENST00000390435.1	TRAV8-3*01
ENST00000390436.2	F
ENST00000390436.2	TRAV13-1*01
ENST00000390437.2	F
ENST00000390437.2	TRAV12-2*01
ENST00000390438.2	F
ENST00000390438.2	TRAV8-4*01
ENST00000537369.2	P
ENST00000390439.2	F
ENST00000390439.2	TRAV13-2*01
ENST00000390440.2	F
ENST00000390440.2	TRAV14/DV4*02
ENST00000390441.2	F
ENST00000390441.2	TRAV9-2*01
ENST00000556680.1	P
ENST00000556680.1	TRAV15*01
ENST00000390442.3	F
ENST00000390442.3	TRAV12-3*01
ENST00000390443.3	F
ENST00000390443.3	TRAV8-6*01
ENST00000390444.1	F
ENST00000390444.1	TRAV16*01
ENST00000390445.2	F
ENST00000390445.2	TRAV17*01
ENST00000390446.3	F
ENST00000390446.3	TRAV18*01
ENST00000390447.3	F
ENST00000390447.3	TRAV19*01
ENST00000390447.3	upstream ATG
ENST00000390448.3	F
ENST00000390448.3	TRAV20*01
ENST00000390449.3	F
ENST00000390449.3	TRAV21*01
ENST00000390450.3	F
ENST00000390450.3	TRAV22*01
ENST00000390450.3	upstream ATG
ENST00000390451.2	F
ENST00000390451.2	TRAV23/DV6*01
ENST00000390452.2	F
ENST00000390452.2	TRDV1*01
ENST00000390453.1	F
ENST00000390453.1	TRAV24*01
ENST00000390454.2	F
ENST00000390454.2	TRAV25*01
ENST00000390454.2	upstream ATG
ENST00000390455.3	F
ENST00000390455.3	TRAV26-1*01
ENST00000390456.3	ORF
ENST00000390456.3	TRAV8-7
ENST00000390457.2	F
ENST00000390457.2	TRAV27*01
ENST00000557548.1	P
ENST00000557548.1	TRAV28*01
ENST00000390458.3	F
ENST00000390458.3	TRAV29/DV5*01
ENST00000557168.1	F
ENST00000557168.1	TRAV30*01
ENST00000502780.2	P
ENST00000502780.2	TRAV31*01
ENST00000553993.1	P
ENST00000553993.1	TRAV32*01
ENST00000557514.1	P
ENST00000557514.1	TRAV33*01
ENST00000656379.1	Assembled from SLRseq reads (SRP049776)
ENST00000541008.6	Assembled from SLRseq reads (SRP049776)
ENST00000653737.1	Assembled from SLRseq reads (SRP049776)
ENST00000655336.1	Assembled from SLRseq reads (SRP049776)
ENST00000655085.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668212.1	Assembled from SLRseq reads (SRP049776)
ENST00000390460.1	F
ENST00000390460.1	TRAV26-2*01
ENST00000390461.2	F
ENST00000390461.2	TRAV34*01
ENST00000390462.1	confirm experimentally
ENST00000390462.1	rs17198047 was a known SNP which introduces a premature stop, however it has been withdrawn. Either this is a novel allele causing a pseudogene or its a sequence error on the new clone picked for H38
ENST00000390463.3	F
ENST00000390463.3	TRAV36/DV7*01
ENST00000553906.1	P
ENST00000553906.1	TRAV37*01
ENST00000390464.2	F
ENST00000390464.2	TRAV38-1*01
ENST00000390465.2	F
ENST00000390465.2	TRAV38-2/DV8*01
ENST00000390466.1	F
ENST00000390466.1	TRAV39*01
ENST00000390467.3	F
ENST00000390467.3	TRAV40*01
ENST00000390468.1	F
ENST00000390468.1	TRAV41*01
ENST00000555460.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000390469.2	F
ENST00000390469.2	TRDV2*03
ENST00000415118.1	F
ENST00000415118.1	TRDD1*01
ENST00000434970.2	F
ENST00000434970.2	TRDD2*01
ENST00000448914.1	F
ENST00000448914.1	TRDD3*01
ENST00000390473.1	F
ENST00000390473.1	TRDJ1*01
ENST00000390474.1	F
ENST00000390474.1	TRDJ4*01
ENST00000390475.1	F
ENST00000390475.1	TRDJ2*01
ENST00000390476.1	F
ENST00000390476.1	TRDJ3*01
ENST00000390477.2	F
ENST00000390477.2	TRDC*01
ENST00000535880.2	F
ENST00000535880.2	TRDV3*01
ENST00000390479.2	ORF
ENST00000390479.2	TRAJ61*01
ENST00000442641.3	P
ENST00000442641.3	TRAJ60*01
ENST00000390480.2	ORF
ENST00000390480.2	TRAJ59*01
ENST00000390481.1	ORF
ENST00000390481.1	TRAJ58*01
ENST00000390482.1	F
ENST00000390482.1	TRAJ57*01
ENST00000390483.1	F
ENST00000390483.1	TRAJ56*01
ENST00000509135.1	P
ENST00000509135.1	TRAJ55*01
ENST00000390484.1	F
ENST00000390484.1	TRAJ54*01
ENST00000390485.1	F
ENST00000390485.1	TRAJ53*01
ENST00000390486.1	F
ENST00000390486.1	TRAJ52*01
ENST00000504127.1	P
ENST00000504127.1	TRAJ51*01
ENST00000390487.1	F
ENST00000390487.1	TRAJ50*01
ENST00000390488.1	F
ENST00000390488.1	TRAJ49*01
ENST00000390489.1	F
ENST00000390489.1	TRAJ48*01
ENST00000390490.1	F
ENST00000390490.1	TRAJ47*01
ENST00000390491.1	F
ENST00000390491.1	TRAJ46*01
ENST00000390492.1	F
ENST00000390492.1	TRAJ45*01
ENST00000390493.1	F
ENST00000390493.1	TRAJ44*01
ENST00000390494.1	F
ENST00000390494.1	TRAJ43*01
ENST00000390495.1	F
ENST00000390495.1	TRAJ42*01
ENST00000390496.1	F
ENST00000390496.1	TRAJ41*01
ENST00000390497.1	F
ENST00000390497.1	TRAJ40*01
ENST00000390498.1	F
ENST00000390498.1	TRAJ39*01
ENST00000390499.1	F
ENST00000390499.1	TRAJ38*01
ENST00000614481.1	F
ENST00000614481.1	TRAJ36*01
ENST00000390502.1	ORF
ENST00000390502.1	TRAJ35*01
ENST00000390503.1	F
ENST00000390503.1	TRAJ34*01
ENST00000390504.1	F
ENST00000390504.1	TRAJ33*01
ENST00000390505.1	F
ENST00000390505.1	TRAJ32*01
ENST00000390506.1	F
ENST00000390506.1	TRAJ31*01
ENST00000390507.1	F
ENST00000390507.1	TRAJ30*01
ENST00000390508.1	F
ENST00000390508.1	TRAJ29*01
ENST00000390509.1	F
ENST00000390509.1	TRAJ28*01
ENST00000390510.1	F
ENST00000390510.1	TRAJ27*01
ENST00000390511.1	F
ENST00000390511.1	TRAJ26*01
ENST00000390512.2	ORF
ENST00000390512.2	TRAJ25*01
ENST00000390513.1	F
ENST00000390513.1	TRAJ24*02
ENST00000390514.1	F
ENST00000390514.1	TRAJ23*01
ENST00000390515.1	F
ENST00000390515.1	TRAJ22*01
ENST00000390516.1	F
ENST00000390516.1	TRAJ21*01
ENST00000390517.1	F
ENST00000390517.1	TRAJ20*01
ENST00000390518.1	ORF
ENST00000390518.1	TRAJ19*01
ENST00000390519.1	F
ENST00000390519.1	TRAJ18*01
ENST00000390520.1	F
ENST00000390520.1	TRAJ17*01
ENST00000390521.1	F
ENST00000390521.1	TRAJ16*01
ENST00000390522.1	No 100% transcript evidence, functional in IMGT
ENST00000390522.1	Requested the genome sequence to be checked for sequencing error but possible new allele
ENST00000390523.1	F
ENST00000390523.1	TRAJ14*01
ENST00000390524.1	F
ENST00000390524.1	TRAJ13*01
ENST00000390525.1	F
ENST00000390525.1	TRAJ12*01
ENST00000390526.1	F
ENST00000390526.1	TRAJ11*01
ENST00000390527.1	F
ENST00000390527.1	TRAJ10*01
ENST00000390528.1	F
ENST00000390528.1	TRAJ9*01
ENST00000390529.1	H38 introduces a premature stop. I have annotated as an IG pseudogene but it is currently unknown allele
ENST00000390529.1	confirm experimentally
ENST00000390530.1	F
ENST00000390530.1	TRAJ7*01
ENST00000390531.1	F
ENST00000390531.1	TRAJ6*01
ENST00000390532.1	F
ENST00000390532.1	TRAJ5*01
ENST00000390533.1	F
ENST00000390533.1	TRAJ4*01
ENST00000390534.1	F
ENST00000390534.1	TRAJ3*01
ENST00000390535.2	ORF
ENST00000390535.2	TRAJ2*01
ENST00000390536.2	ORF
ENST00000390536.2	TRAJ1*01
ENST00000250498.9	MANE_select
ENST00000216327.10	NMD likely if extended
ENST00000216327.10	non canonical TEC
ENST00000541962.1	not organism-supported
ENST00000540461.2	ENA ID EGAS00001001486
ENST00000540461.2	LOF variant in other haplotypes
ENST00000540461.2	MANE_select
ENST00000650620.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000653926.1	Assembled from SLRseq reads (SRP049776)
ENST00000414424.1	unitary_pseudogene
ENST00000612549.6	CAGE supported TSS
ENST00000612549.6	MANE_select
ENST00000431881.6	QC splicing correct
ENST00000412791.5	Genoscope mRNA only
ENST00000412791.5	QC splicing correct
ENST00000674313.1	MANE_select
ENST00000285850.11	alternative 5' UTR
ENST00000397532.9	alternative 5' UTR
ENST00000397529.6	alternative 5' UTR
ENST00000397528.8	alternative 5' UTR
ENST00000554758.1	alternative 5' UTR
ENST00000488800.5	alternative 5' UTR
ENST00000555251.1	alternative 5' UTR
ENST00000557629.5	alternative 5' UTR
ENST00000555911.1	alternative 5' UTR
ENST00000557129.5	alternative 5' UTR
ENST00000554741.5	alternative 5' UTR
ENST00000555959.1	QC splicing correct
ENST00000555959.1	alternative 5' UTR
ENST00000553874.5	alternative 5' UTR
ENST00000553351.1	alternative 5' UTR
ENST00000553632.1	alternative 5' UTR
ENST00000355151.9	NP_848026.1
ENST00000553482.5	NAGNAG splice site
ENST00000556654.5	NMD likely if extended
ENST00000397496.7	MANE_select
ENST00000397496.7	NP_851313.1
ENST00000555345.5	NP_851822.1
ENST00000432849.7	NAGNAG splice site
ENST00000553711.5	NP_851821.1
ENST00000556465.5	NAGNAG splice site
ENST00000397505.2	NP_851824.1
ENST00000556840.5	alternative 5' UTR
ENST00000311852.11	MANE_select
ENST00000391033.1	CAGE supported TSS
ENST00000359591.9	MANE_select
ENST00000267396.9	MANE_select
ENST00000359890.8	MANE_select
ENST00000553884.5	NAGNAG splice site
ENST00000556984.5	NMD likely if extended
ENST00000557549.5	alternative 5' UTR
ENST00000555676.5	alternative 5' UTR
ENST00000557571.5	alternative 5' UTR
ENST00000556862.5	alternative 5' UTR
ENST00000557464.5	alternative 5' UTR
ENST00000554618.5	alternative 5' UTR
ENST00000553876.2	alternative 5' UTR
ENST00000555691.1	alternative 5' UTR
ENST00000609885.1	nested 454 RNA-Seq supported
ENST00000457443.2	nested 454 RNA-Seq supported
ENST00000397441.6	NP_001034708.1
ENST00000476175.6	NMD likely if extended
ENST00000324366.13	MANE_select
ENST00000454731.6	NAGNAG splice site
ENST00000556032.1	QC splicing correct
ENST00000668190.1	Assembled from SLRseq reads (SRP049776)
ENST00000541587.6	MANE_select
ENST00000541587.6	alternative 5' UTR
ENST00000342454.12	alternative 5' UTR
ENST00000555986.5	alternative 5' UTR
ENST00000555040.5	alternative 5' UTR
ENST00000554349.5	NMD likely if extended
ENST00000553794.5	QC splicing correct
ENST00000554373.5	NMD likely if extended
ENST00000554651.5	NMD likely if extended
ENST00000554516.5	alternative 5' UTR
ENST00000557591.5	alternative 5' UTR
ENST00000554406.1	alternative 5' UTR
ENST00000262713.7	MANE_select
ENST00000397388.7	NP_932352.1
ENST00000553592.5	alternative 5' UTR
ENST00000556731.5	alternative 5' UTR
ENST00000553911.1	alternative 5' UTR
ENST00000299088.11	MANE_select
ENST00000397379.7	alternative 5' UTR
ENST00000397382.8	alternative 5' UTR
ENST00000397380.6	alternative 5' UTR
ENST00000553675.5	alternative 5' UTR
ENST00000553931.5	alternative 5' UTR
ENST00000555575.5	alternative 5' UTR
ENST00000556812.5	QC splicing correct
ENST00000555098.5	alternative 5' UTR
ENST00000555998.5	alternative 5' UTR
ENST00000556419.5	alternative 5' UTR
ENST00000553606.5	alternative 5' UTR
ENST00000554179.5	alternative 5' UTR
ENST00000557513.5	alternative 5' UTR
ENST00000553316.1	alternative 5' UTR
ENST00000556896.1	alternative 5' UTR
ENST00000361611.11	MANE_select
ENST00000493471.2	NP_001138404.1
ENST00000425762.2	NP_001124197.1
ENST00000408907.5	MANE_select
ENST00000557515.5	NAGNAG splice site
ENST00000357481.6	alternative 5' UTR
ENST00000605057.5	CAGE supported TSS
ENST00000555053.5	NAGNAG splice site
ENST00000553721.5	NMD likely if extended
ENST00000319074.6	MANE_select
ENST00000554203.1	alternative 5' UTR
ENST00000637218.2	LOC100128908
ENST00000637218.2	MANE_select
ENST00000206513.6	MANE_select
ENST00000316902.12	MANE_select
ENST00000453702.5	NP_877392.1
ENST00000524758.1	alternative 5' UTR
ENST00000525062.1	alternative 5' UTR
ENST00000492621.5	QC splicing correct
ENST00000399905.5	QC splicing correct
ENST00000492355.5	QC splicing correct
ENST00000357460.7	MANE_select
ENST00000561013.2	HOMEZ family domain
ENST00000452015.9	MANE_select
ENST00000452015.9	NMD exception
ENST00000558058.5	NMD exception
ENST00000559314.5	NMD exception
ENST00000560913.1	NMD exception
ENST00000560073.5	QC splicing correct
ENST00000559942.5	NMD exception
ENST00000561437.1	NMD exception
ENST00000553824.5	alternative 5' UTR
ENST00000679219.1	alternative 5' UTR
ENST00000678311.1	alternative 5' UTR
ENST00000250405.10	MANE_select
ENST00000679000.1	alternative 5' UTR
ENST00000554635.1	alternative 5' UTR
ENST00000557008.2	alternative 5' UTR
ENST00000216733.8	MANE_select
ENST00000649278.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000339180.9	MANE_select
ENST00000555731.5	QC splicing correct
ENST00000405093.9	CAGE supported TSS
ENST00000405093.9	LR annotation
ENST00000405093.9	MANE_select
ENST00000355349.4	MANE_select
ENST00000408901.8	MANE_select
ENST00000556483.5	QC splicing correct
ENST00000419474.5	MANE_select
ENST00000412565.2	alternative 5' UTR
ENST00000555334.1	alternative 5' UTR
ENST00000404535.3	alternative 5' UTR
ENST00000557630.1	alternative 5' UTR
ENST00000288014.7	MANE_select
ENST00000397120.8	MANE_select
ENST00000397120.8	alternative 5' UTR
ENST00000555510.5	QC splicing correct
ENST00000556277.5	NMD likely if extended
ENST00000556277.5	alternative 5' UTR
ENST00000556943.5	alternative 5' UTR
ENST00000557482.5	alternative 5' UTR
ENST00000557189.5	alternative 5' UTR
ENST00000556843.1	alternative 5' UTR
ENST00000397118.7	alternative 5' UTR
ENST00000356300.9	MANE_select
ENST00000432832.6	alternative 5' UTR
ENST00000250383.11	MANE_select
ENST00000664134.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667318.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658193.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665444.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660075.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669662.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664659.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652858.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669008.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649745.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000559615.1	Genoscope mRNA only
ENST00000559615.1	QC splicing correct
ENST00000656761.1	Assembled from SLRseq reads (SRP049776)
ENST00000555045.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000555045.2	Assembled from SLRseq reads (SRP049776)
ENST00000660207.1	Assembled from SLRseq reads (SRP049776)
ENST00000667602.1	Assembled from SLRseq reads (SRP049776)
ENST00000666884.1	Assembled from SLRseq reads (SRP049776)
ENST00000654375.1	Assembled from SLRseq reads (SRP049776)
ENST00000671411.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671411.1	Assembled from SLRseq reads (SRP049776)
ENST00000656462.1	Assembled from SLRseq reads (SRP049776)
ENST00000671346.1	Assembled from SLRseq reads (SRP049776)
ENST00000671464.1	Assembled from SLRseq reads (SRP049776)
ENST00000671431.1	Assembled from SLRseq reads (SRP049776)
ENST00000399886.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663118.1	Assembled from SLRseq reads (SRP049776)
ENST00000558263.5	QC splicing correct
ENST00000313250.10	MANE_select
ENST00000558581.5	confirm experimentally
ENST00000559975.1	QC splicing correct
ENST00000559411.5	confirm experimentally
ENST00000335125.11	MANE_select
ENST00000658653.1	Assembled from SLRseq reads (SRP049776)
ENST00000342740.6	MANE_select
ENST00000342740.6	NP_612369.3
ENST00000342740.6	confirm experimentally
ENST00000560356.5	alternative 5' UTR
ENST00000558450.5	alternative 5' UTR
ENST00000559778.5	alternative 5' UTR
ENST00000560761.5	alternative 5' UTR
ENST00000557889.1	alternative 5' UTR
ENST00000558541.5	alternative 5' UTR
ENST00000559197.5	alternative 5' UTR
ENST00000561028.6	MANE_select
ENST00000561028.6	alternative 5' UTR
ENST00000396997.1	alternative 5' UTR
ENST00000558280.1	alternative 5' UTR
ENST00000559250.5	Genoscope mRNA only
ENST00000559250.5	QC splicing correct
ENST00000216780.9	MANE_select
ENST00000559017.5	alternative 5' UTR
ENST00000559115.5	alternative 5' UTR
ENST00000558215.5	alternative 5' UTR
ENST00000557810.5	alternative 5' UTR
ENST00000561375.5	alternative 5' UTR
ENST00000446197.8	MANE_select
ENST00000559796.5	alternative 5' UTR
ENST00000560713.5	alternative 5' UTR
ENST00000559382.5	alternative 5' UTR
ENST00000561001.5	alternative 5' UTR
ENST00000559396.5	alternative 5' UTR
ENST00000558638.5	alternative 5' UTR
ENST00000561041.5	alternative 5' UTR
ENST00000558408.1	alternative 5' UTR
ENST00000559354.5	alternative 5' UTR
ENST00000560459.5	alternative 5' UTR
ENST00000559593.5	alternative 5' UTR
ENST00000267426.6	LOC161247
ENST00000267426.6	MANE_select
ENST00000559123.5	Genoscope mRNA only
ENST00000559123.5	QC splicing correct
ENST00000206451.11	MANE_select
ENST00000382708.7	NP_788955.1
ENST00000419198.6	alternative 5' UTR
ENST00000216799.9	MANE_select
ENST00000558200.1	NMD likely if extended
ENST00000558200.1	alternative 5' UTR
ENST00000216802.10	MANE_select
ENST00000559613.1	NMD likely if extended
ENST00000561103.1	alternative 5' UTR
ENST00000560875.1	alternative 5' UTR
ENST00000557991.5	alternative 5' UTR
ENST00000324103.11	CAGE supported TSS
ENST00000324103.11	LR annotation
ENST00000324103.11	MANE_select
ENST00000396864.8	MANE_select
ENST00000557806.5	alternative 5' UTR
ENST00000611366.5	MANE_select
ENST00000611366.5	alternative 5' UTR
ENST00000354464.11	MANE_select
ENST00000655961.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000261789.9	MANE_select
ENST00000524835.5	Genbank BAG65421.1
ENST00000396854.8	NP_001014842.1
ENST00000530563.1	alternative 5' UTR
ENST00000530468.5	alternative 5' UTR
ENST00000525592.1	alternative 5' UTR
ENST00000528010.1	alternative 5' UTR
ENST00000530611.1	CAGE supported TSS
ENST00000339917.10	MANE_select
ENST00000555092.1	QC splicing correct
ENST00000347519.12	CAGE supported TSS
ENST00000347519.12	MANE_select
ENST00000530996.5	CAGE supported TSS
ENST00000288087.12	MANE_select
ENST00000250495.10	MANE_select
ENST00000355299.8	alternative 5' UTR
ENST00000420554.6	NP_057660.2
ENST00000399440.7	MANE_select
ENST00000399440.7	alternative 5' UTR
ENST00000558788.1	QC splicing correct
ENST00000267415.12	CAGE supported TSS
ENST00000267415.12	LR annotation
ENST00000267415.12	MANE_select
ENST00000558510.1	NMD likely if extended
ENST00000206765.11	MANE_select
ENST00000558074.1	QC splicing correct
ENST00000558074.1	alternative 5' UTR
ENST00000560443.1	alternative 5' UTR
ENST00000560478.1	alternative 5' UTR
ENST00000560226.1	alternative 5' UTR
ENST00000561067.1	alternative 5' UTR
ENST00000216840.11	MANE_select
ENST00000216840.11	NP_878256.1
ENST00000399409.7	NP_004572.3
ENST00000399409.7	alternative 5' UTR
ENST00000559551.5	Genoscope mRNA only
ENST00000559551.5	QC splicing correct
ENST00000559974.5	Genoscope mRNA only
ENST00000559974.5	QC splicing correct
ENST00000558376.5	Genoscope mRNA only
ENST00000558376.5	QC splicing correct
ENST00000558376.5	alternative 5' UTR
ENST00000543002.5	alternative 5' UTR
ENST00000669726.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654775.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000288111.12	MANE_select
ENST00000396813.5	alternative 5' UTR
ENST00000559483.5	NMD likely if extended
ENST00000267425.8	MANE_select
ENST00000396802.7	QC splicing correct
ENST00000650565.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000554411.5	alternative 5' UTR
ENST00000336557.9	alternative 5' UTR
ENST00000258807.5	QC splicing correct
ENST00000527924.6	alternative 5' UTR
ENST00000528054.1	alternative 5' UTR
ENST00000533293.2	MANE_select
ENST00000533293.2	NP_062813.2
ENST00000530080.1	alternative 5' UTR
ENST00000553481.1	alternative 5' UTR
ENST00000345363.8	MANE_select
ENST00000345363.8	alternative 5' UTR
ENST00000396782.2	alternative 5' UTR
ENST00000418030.7	MANE_select
ENST00000418030.7	alternative 5' UTR
ENST00000554068.6	alternative 5' UTR
ENST00000554781.5	alternative 5' UTR
ENST00000557099.2	alternative 5' UTR
ENST00000559167.5	alternative 5' UTR
ENST00000558563.5	alternative 5' UTR
ENST00000558125.1	alternative 5' UTR
ENST00000561138.1	alternative 5' UTR
ENST00000216274.10	MANE_select
ENST00000554338.1	NMD likely if extended
ENST00000413692.6	NP_001129494.1
ENST00000554903.1	alternative 5' UTR
ENST00000250373.9	MANE_select
ENST00000250373.9	NP_004545.2
ENST00000554344.5	alternative 5' UTR
ENST00000382554.4	MANE_select
ENST00000267406.11	MANE_select
ENST00000251343.9	alternative 5' UTR
ENST00000556842.5	alternative 5' UTR
ENST00000553935.6	MANE_select
ENST00000556510.1	alternative 5' UTR
ENST00000556255.1	not organism-supported
ENST00000656888.1	Assembled from SLRseq reads (SRP049776)
ENST00000555109.1	QC splicing correct
ENST00000250378.7	MANE_select
ENST00000216336.3	MANE_select
ENST00000216338.9	MANE_select
ENST00000557220.6	non canonical TEC
ENST00000216341.9	MANE_select
ENST00000532263.5	QC splicing correct
ENST00000530830.1	not organism-supported
ENST00000323944.9	alternative 5' UTR
ENST00000419632.6	alternative 5' UTR
ENST00000546511.5	alternative 5' UTR
ENST00000653098.1	Assembled from SLRseq reads (SRP049776)
ENST00000658605.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665826.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668310.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000552425.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000546412.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000657312.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000649052.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000539517.7	MANE_select
ENST00000653681.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656804.1	Assembled from SLRseq reads (SRP049776)
ENST00000662478.1	Assembled from SLRseq reads (SRP049776)
ENST00000663208.1	Assembled from SLRseq reads (SRP049776)
ENST00000671020.1	Assembled from SLRseq reads (SRP049776)
ENST00000667328.1	Assembled from SLRseq reads (SRP049776)
ENST00000548328.5	QC splicing correct
ENST00000656336.1	Assembled from SLRseq reads (SRP049776)
ENST00000664825.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662892.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653199.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671365.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662232.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661868.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664061.1	Assembled from SLRseq reads (SRP049776)
ENST00000660737.1	Assembled from SLRseq reads (SRP049776)
ENST00000659271.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000661570.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657233.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000548170.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654842.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657558.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658815.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656237.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667739.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654874.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667676.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653481.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669484.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663099.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655440.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666571.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653927.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666377.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666037.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658149.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670889.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667699.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662028.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656692.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668735.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669068.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662039.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000557359.6	Assembled from SLRseq reads (SRP049776)
ENST00000663380.1	Assembled from SLRseq reads (SRP049776)
ENST00000669384.1	Assembled from SLRseq reads (SRP049776)
ENST00000662633.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654854.1	Assembled from SLRseq reads (SRP049776)
ENST00000658593.1	Assembled from SLRseq reads (SRP049776)
ENST00000549487.1	QC splicing correct
ENST00000313071.7	MANE_select
ENST00000313071.7	NP_005240.3
ENST00000668749.1	Assembled from SLRseq reads (SRP049776)
ENST00000399387.9	Assembled from SLRseq reads (SRP049776)
ENST00000622740.3	Assembled from SLRseq reads (SRP049776)
ENST00000653638.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000671672.1	Assembled from SLRseq reads (SRP049776)
ENST00000661288.1	Assembled from SLRseq reads (SRP049776)
ENST00000664733.1	Assembled from SLRseq reads (SRP049776)
ENST00000656598.1	Assembled from SLRseq reads (SRP049776)
ENST00000653605.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671154.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656401.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657120.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000551588.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658814.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657083.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000548775.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660501.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670211.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655423.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667065.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664085.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665952.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657147.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660700.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669074.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669074.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000660033.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000552028.2	QC splicing correct
ENST00000659312.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000551227.1	QC splicing correct
ENST00000660765.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668716.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654499.1	Assembled from SLRseq reads (SRP049776)
ENST00000662728.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658430.1	Assembled from SLRseq reads (SRP049776)
ENST00000667237.1	Assembled from SLRseq reads (SRP049776)
ENST00000662227.1	Assembled from SLRseq reads (SRP049776)
ENST00000654976.1	Assembled from SLRseq reads (SRP049776)
ENST00000670241.1	Assembled from SLRseq reads (SRP049776)
ENST00000649245.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000667982.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000331968.11	CAGE supported TSS
ENST00000331968.11	LR annotation
ENST00000331968.11	MANE_select
ENST00000549503.1	downstream ATG
ENST00000654897.1	Assembled from SLRseq reads (SRP049776)
ENST00000550944.5	alternative 5' UTR
ENST00000206595.11	MANE_select
ENST00000648008.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000554714.5	alternative 5' UTR
ENST00000547532.5	alternative 5' UTR
ENST00000555429.1	alternative 5' UTR
ENST00000676509.1	NAGNAG splice site
ENST00000676812.1	upstream ATG
ENST00000484733.6	QC splicing correct
ENST00000458591.7	MANE_select
ENST00000554776.5	QC splicing correct
ENST00000396618.9	MANE_select
ENST00000644874.2	CAGE supported TSS
ENST00000644874.2	LR annotation
ENST00000644874.2	alternative 5' UTR
ENST00000643575.1	alternative 3' UTR
ENST00000661204.1	Assembled from RACEseq reads
ENST00000468444.3	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000357479.10	MANE_select
ENST00000554991.5	QC splicing correct
ENST00000556577.1	QC splicing correct
ENST00000557346.5	alternative 5' UTR
ENST00000556232.5	alternative 5' UTR
ENST00000542754.7	CAGE supported TSS
ENST00000542754.7	LR annotation
ENST00000542754.7	MANE_select
ENST00000554609.5	QC splicing correct
ENST00000555417.5	alternative 5' UTR
ENST00000555417.5	upstream uORF
ENST00000399332.6	MANE_select
ENST00000399332.6	genebuild_only_MANE
ENST00000556224.5	alternative 5' UTR
ENST00000543095.7	MANE_select
ENST00000549184.1	alternative 5' UTR
ENST00000547760.1	non canonical TEC
ENST00000660225.1	Assembled from SLRseq reads (SRP049776)
ENST00000310850.9	MANE_select
ENST00000399285.5	MANE_select
ENST00000281081.12	MANE_select
ENST00000553596.2	C14orf128 chromosome 14 open reading frame 128
ENST00000553596.2	CAGE supported TSS
ENST00000555814.1	alternative 5' UTR
ENST00000345122.8	MANE_select
ENST00000345122.8	genebuild_only_MANE
ENST00000556191.5	alternative 5' UTR
ENST00000554090.1	alternative 5' UTR
ENST00000648308.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000670017.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000280979.9	MANE_select
ENST00000557102.1	alternative 5' UTR
ENST00000557272.1	QC splicing correct
ENST00000555950.5	QC splicing correct
ENST00000552696.1	QC splicing correct
ENST00000665335.1	Assembled from SLRseq reads (SRP049776)
ENST00000657073.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000250457.9	MANE_select
ENST00000298130.5	MANE_select
ENST00000250454.8	MANE_select
ENST00000623080.1	confirm experimentally
ENST00000362031.10	MANE_select
ENST00000362031.10	upstream ATG
ENST00000396526.7	NP_067072.3
ENST00000556162.6	upstream ATG
ENST00000555416.6	upstream ATG
ENST00000557265.6	upstream ATG
ENST00000298159.11	MANE_select
ENST00000360310.6	MANE_select
ENST00000360310.6	genebuild_only_MANE
ENST00000382422.6	CCDS:CCDS9651.1
ENST00000555331.1	QC splicing correct
ENST00000554865.1	not organism-supported
ENST00000556994.5	CCDS9652.1
ENST00000678836.1	align_id:3585311|asmbl_75476
ENST00000554803.5	alternative 5' UTR
ENST00000546080.6	align_id:3585304|asmbl_75469
ENST00000555746.6	align_id:3585309|asmbl_75474
ENST00000678963.1	align_id:3585301|asmbl_75466
ENST00000678963.1	alternative 5' UTR
ENST00000677561.1	align_id:3585308|asmbl_75473
ENST00000679045.1	align_id:3585318|asmbl_75483
ENST00000553923.2	align_id:3585314|asmbl_75479
ENST00000678477.1	align_id:3585312|asmbl_75477
ENST00000677621.1	align_id:3585310|asmbl_75475
ENST00000678519.1	align_id:3585303|asmbl_75468
ENST00000678627.1	align_id:3585305|asmbl_75470
ENST00000216774.11	MANE_select
ENST00000216774.11	align_id:3585300|asmbl_75465
ENST00000216774.11	genebuild_only_MANE
ENST00000555557.5	align_id:3585302|asmbl_75467
ENST00000678274.1	align_id:3585307|asmbl_75472
ENST00000677647.1	CAGE supported TSS
ENST00000677647.1	align_id:1307748|asmbl_27651
ENST00000556992.1	align_id:3585324|asmbl_75489
ENST00000555211.5	alternative 5' UTR
ENST00000280987.9	CCDS9653.1
ENST00000280987.9	MANE_select
ENST00000382406.7	CCDS41944.1
ENST00000556858.2	QC splicing correct
ENST00000553955.2	QC splicing correct
ENST00000261475.10	CCDS9654.1
ENST00000261475.10	MANE_select
ENST00000554361.5	QC splicing correct
ENST00000557278.1	alternative 5' UTR
ENST00000553282.1	not organism-supported
ENST00000603611.5	alternative 5' UTR
ENST00000604073.1	alternative 5' UTR
ENST00000534898.9	MANE_select
ENST00000605201.1	alternative 5' UTR
ENST00000603544.5	alternative 5' UTR
ENST00000605870.5	NP_001243610.1
ENST00000261479.9	CCDS9655.1
ENST00000261479.9	MANE_select
ENST00000556506.1	QC splicing correct
ENST00000216797.10	CCDS9656.1
ENST00000216797.10	MANE_select
ENST00000554001.5	Genoscope mRNA only
ENST00000554001.5	QC splicing correct
ENST00000553342.1	not organism-supported
ENST00000307169.4	MANE_select
ENST00000554573.5	QC splicing correct
ENST00000680220.1	CAGE supported TSS
ENST00000680220.1	MANE_select
ENST00000554259.6	QC splicing correct
ENST00000556192.1	QC splicing correct
ENST00000216807.12	MANE_select
ENST00000550089.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668143.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660969.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670721.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662718.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668605.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665409.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000556013.2	CAGE supported TSS
ENST00000556013.2	QC splicing correct
ENST00000556542.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000416007.9	MANE_select
ENST00000667682.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000354822.7	MANE_select
ENST00000518149.5	alternative 5' UTR
ENST00000258829.6	MANE_select
ENST00000555639.2	alternative 5' UTR
ENST00000361487.7	CAGE supported TSS
ENST00000361487.7	MANE_select
ENST00000331299.6	MANE_select
ENST00000554930.5	QC splicing correct
ENST00000556753.5	alternative 5' UTR
ENST00000556024.1	QC splicing correct
ENST00000250448.5	CCDS:CCDS9665.1
ENST00000250448.5	MANE_select
ENST00000553443.5	confirm experimentally
ENST00000267377.3	MANE_select
ENST00000342213.3	MANE_select
ENST00000655453.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666279.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661263.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669030.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658667.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666296.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668125.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661024.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655593.1	Assembled from SLRseq reads (SRP049776)
ENST00000658492.1	Assembled from SLRseq reads (SRP049776)
ENST00000670347.1	Assembled from SLRseq reads (SRP049776)
ENST00000557440.2	Assembled from SLRseq reads (SRP049776)
ENST00000668589.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000557019.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654295.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654295.1	Assembled from SLRseq reads (SRP049776)
ENST00000650718.1	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000671669.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670844.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653832.1	Assembled from SLRseq reads (SRP049776)
ENST00000669541.1	Assembled from SLRseq reads (SRP049776)
ENST00000307712.11	MANE_select
ENST00000555017.5	alternative 5' UTR
ENST00000556092.5	alternative 5' UTR
ENST00000548032.6	alternative 5' UTR
ENST00000555425.5	alternative 5' UTR
ENST00000557437.1	alternative 5' UTR
ENST00000308317.11	upstream ATG
ENST00000525153.6	upstream ATG
ENST00000396249.7	upstream ATG
ENST00000412033.7	upstream ATG
ENST00000250379.13	upstream ATG
ENST00000650481.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000531684.6	QC splicing correct
ENST00000527381.2	QC splicing correct
ENST00000330149.10	MANE_select
ENST00000648024.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000216832.9	MANE_select
ENST00000557148.5	alternative 5' UTR
ENST00000553728.1	QC splicing correct
ENST00000554932.1	alternative 5' UTR
ENST00000659455.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000650949.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662464.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665100.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655630.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666503.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656325.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662828.1	Assembled from SLRseq reads (SRP049776)
ENST00000666800.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657790.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000556620.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661572.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654145.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663500.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651539.1	CAGE supported TSS
ENST00000661475.1	Assembled from SLRseq reads (SRP049776)
ENST00000298119.9	MANE_select
ENST00000553926.1	QC splicing correct
ENST00000554120.5	QC splicing correct
ENST00000557251.1	QC splicing correct
ENST00000655457.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654351.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653326.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000340446.5	MANE_select
ENST00000662197.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000557465.1	QC splicing correct
ENST00000665816.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000556405.1	non canonical TEC
ENST00000325192.8	MANE_select
ENST00000325192.8	overlapping uORF
ENST00000557112.1	QC splicing correct
ENST00000553841.1	not organism-supported
ENST00000396128.9	MANE_select
ENST00000579157.1	alternative 5' UTR
ENST00000556500.1	alternative 5' UTR
ENST00000556239.5	alternative 5' UTR
ENST00000557468.1	alternative 5' UTR
ENST00000361462.7	MANE_select
ENST00000355765.11	MANE_select
ENST00000554429.5	alternative 3' UTR
ENST00000396062.4	MANE_select
ENST00000396062.4	genebuild_only_MANE
ENST00000267430.10	MANE_select
ENST00000557110.1	not organism-supported
ENST00000310806.9	MANE_select
ENST00000451174.1	alternative 5' UTR
ENST00000557602.1	QC splicing correct
ENST00000666179.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664642.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656720.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659741.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000298283.5	MANE_select
ENST00000357362.7	NP_878250
ENST00000472499.2	QC splicing correct
ENST00000555985.6	Assembled from SLRseq reads (SRP049776)
ENST00000665334.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670345.1	Assembled from RACEseq reads
ENST00000663246.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000396020.7	CAGE supported TSS
ENST00000396020.7	LR annotation
ENST00000396020.7	NP_001025172.1
ENST00000245458.11	CAGE supported TSS
ENST00000245458.11	LR annotation
ENST00000245458.11	MANE_select
ENST00000298288.11	MANE_select
ENST00000298289.7	MANE_select
ENST00000305386.4	MANE_select
ENST00000298292.13	MANE_select
ENST00000216367.10	MANE_select
ENST00000216367.10	non canonical conserved
ENST00000539565.6	non canonical conserved
ENST00000556584.5	Genoscope mRNA only
ENST00000556584.5	QC splicing correct
ENST00000359332.7	MANE_select
ENST00000555739.5	Genoscope mRNA only
ENST00000555739.5	QC splicing correct
ENST00000298307.10	MANE_select
ENST00000554589.5	Genoscope mRNA only
ENST00000554589.5	QC splicing correct
ENST00000557247.1	Genoscope mRNA only
ENST00000557247.1	QC splicing correct
ENST00000298310.10	MANE_select
ENST00000655317.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659240.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668702.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000618845.1	CAGE supported TSS
ENST00000298316.7	MANE_select
ENST00000658223.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655269.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000557142.6	Assembled from SLRseq reads (SRP049776)
ENST00000491402.5	CCDS:CCDS9696.1
ENST00000395860.7	MANE_select
ENST00000216373.10	MANE_select
ENST00000267436.9	MANE_select
ENST00000421284.7	alternative 3' UTR
ENST00000555610.1	QC splicing correct
ENST00000426751.7	upstream ATG
ENST00000311459.12	upstream ATG
ENST00000672419.1	upstream ATG
ENST00000557421.7	MANE_select
ENST00000557421.7	align_id:3586303|asmbl_76468
ENST00000554951.5	CAGE supported TSS
ENST00000395834.6	MANE_select
ENST00000525911.5	QC splicing correct
ENST00000556713.1	QC splicing correct
ENST00000554990.5	non canonical conserved
ENST00000013125.8	non canonical conserved
ENST00000441560.6	NP_001121185.1
ENST00000555960.5	alternative 5' UTR
ENST00000553509.1	alternative 5' UTR
ENST00000358385.12	MANE_select
ENST00000674503.1	CAGE supported TSS
ENST00000324679.5	MANE_select
ENST00000530997.7	CAGE supported TSS
ENST00000530997.7	MANE_select
ENST00000476352.5	NMD exception
ENST00000382043.8	NP_057434.4
ENST00000453196.6	align_id:3586383|asmbl_76548
ENST00000485005.1	NMD exception
ENST00000673819.1	NMD likely if extended
ENST00000496749.1	alternative 5' UTR
ENST00000649104.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000557152.1	QC splicing correct
ENST00000216392.8	MANE_select
ENST00000337334.7	MANE_select
ENST00000669299.1	Assembled from SLRseq reads (SRP049776)
ENST00000457354.7	MANE_select
ENST00000669155.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000556479.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665876.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659908.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000356218.8	alternative 5' UTR
ENST00000344768.10	MANE_select
ENST00000617151.1	CAGE supported TSS
ENST00000557376.5	downstream ATG
ENST00000553560.5	alternative 5' UTR
ENST00000335281.8	alternative 5' UTR
ENST00000555472.5	alternative 5' UTR
ENST00000556766.5	alternative 5' UTR
ENST00000554736.5	alternative 5' UTR
ENST00000554875.1	QC splicing correct
ENST00000554875.1	downstream ATG
ENST00000261700.8	MANE_select
ENST00000556760.5	QC splicing correct
ENST00000216286.10	MANE_select
ENST00000306051.3	MANE_select
ENST00000245457.6	MANE_select
ENST00000281741.9	MANE_select
ENST00000321662.11	BC160121
ENST00000321662.11	MANE_select
ENST00000395686.8	MANE_select
ENST00000554019.5	Genoscope mRNA only
ENST00000554019.5	QC splicing correct
ENST00000556039.5	Genoscope mRNA only
ENST00000556039.5	QC splicing correct
ENST00000557240.5	QC splicing correct
ENST00000445930.7	CAGE supported TSS
ENST00000445930.7	MANE_select
ENST00000445930.7	upstream ATG
ENST00000555339.5	QC splicing correct
ENST00000556813.1	QC splicing correct
ENST00000354586.5	MANE_select
ENST00000442123.6	alternative 5' UTR
ENST00000216410.8	MANE_select
ENST00000650397.1	"AL139317.4-006"    -191028 -190770 (259)
ENST00000650397.1	"AL139317.4-006"    -193540 -191950 (1591)
ENST00000650397.1	"AL139317.4-006"    -195822 -195761 (62)
ENST00000650397.1	"AL139317.4-006"    -196993 -196866 (128)
ENST00000650397.1	"AL139317.4-006"    -198567 -198505 (63)
ENST00000650397.1	"AL139317.4-006"    -199736 -199579 (158)
ENST00000650397.1	347:length=713 ;
ENST00000650397.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000554230.5	QC splicing correct
ENST00000557604.1	alternative 5' UTR
ENST00000555689.1	QC splicing correct
ENST00000654071.1	Assembled from SLRseq reads (SRP049776)
ENST00000658290.1	Assembled from SLRseq reads (SRP049776)
ENST00000670923.1	Assembled from SLRseq reads (SRP049776)
ENST00000649005.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000669838.1	Assembled from SLRseq reads (SRP049776)
ENST00000658625.1	Assembled from SLRseq reads (SRP049776)
ENST00000661601.1	Assembled from SLRseq reads (SRP049776)
ENST00000653549.1	Assembled from SLRseq reads (SRP049776)
ENST00000654425.1	Assembled from SLRseq reads (SRP049776)
ENST00000395631.6	alternative 5' UTR
ENST00000341590.8	CCDS9713
ENST00000341590.8	MANE_select
ENST00000554712.5	alternative 5' UTR
ENST00000657782.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000673822.2	LR annotation
ENST00000673822.2	MANE_select
ENST00000555621.1	non canonical TEC
ENST00000654605.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653185.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663291.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656426.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666968.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000454942.5	QC splicing correct
ENST00000666730.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659459.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667619.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663444.1	Assembled from SLRseq reads (SRP049776)
ENST00000456100.6	Assembled from SLRseq reads (SRP049776)
ENST00000661514.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665016.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663120.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668546.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668539.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655713.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653852.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648066.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000669041.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669612.1	Assembled from SLRseq reads (SRP049776)
ENST00000670436.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669401.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666758.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649040.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000652780.1	Assembled from SLRseq reads (SRP049776)
ENST00000418927.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000418927.2	QC splicing correct
ENST00000559087.5	alternative 5' UTR
ENST00000245451.9	MANE_select
ENST00000558984.1	alternative 5' UTR
ENST00000559642.1	alternative 5' UTR
ENST00000667337.1	Assembled from SLRseq reads (SRP049776)
ENST00000458126.6	Genoscope mRNA only
ENST00000458126.6	QC splicing correct
ENST00000335183.11	MANE_select
ENST00000216416.9	MANE_select
ENST00000554908.5	non canonical U12
ENST00000358056.8	MANE_select
ENST00000358056.8	non canonical U12
ENST00000553333.1	non canonical TEC
ENST00000216420.12	MANE_select
ENST00000554335.6	MANE_select
ENST00000648102.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000655147.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000395514.5	alternative 3' UTR
ENST00000491895.7	MANE_select
ENST00000360586.8	MANE_select
ENST00000420358.2	NP_001008397.1
ENST00000555846.2	MANE_select
ENST00000555846.2	alternative 5' UTR
ENST00000339298.2	alternative 5' UTR
ENST00000395468.9	MANE_select
ENST00000254301.14	MANE_select
ENST00000247191.7	MANE_select
ENST00000660805.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000313833.5	MANE_select
ENST00000440021.1	alternative 5' UTR
ENST00000247178.6	MANE_select
ENST00000247219.5	CCDS9724
ENST00000556755.1	non canonical TEC
ENST00000554558.6	Assembled from SLRseq reads (SRP049776)
ENST00000663990.1	Assembled from SLRseq reads (SRP049776)
ENST00000653613.1	Assembled from SLRseq reads (SRP049776)
ENST00000335142.5	alternative 5' UTR
ENST00000535211.1	Genoscope mRNA only
ENST00000535211.1	QC splicing correct
ENST00000663686.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000557267.1	alternative 5' UTR
ENST00000395314.8	MANE_select
ENST00000555498.5	alternative 5' UTR
ENST00000459737.5	CCDS9725
ENST00000554221.7	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000664335.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662992.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662992.1	Assembled from SLRseq reads (SRP049776)
ENST00000668222.1	Assembled from SLRseq reads (SRP049776)
ENST00000654270.1	Assembled from SLRseq reads (SRP049776)
ENST00000664277.1	Assembled from SLRseq reads (SRP049776)
ENST00000267460.9	MANE_select
ENST00000663878.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000560924.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666463.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664388.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664536.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000556810.5	upstream uORF
ENST00000556422.5	upstream uORF
ENST00000261556.11	MANE_select
ENST00000672264.2	CAGE supported TSS
ENST00000672264.2	MANE_select
ENST00000408990.8	alternative 5' UTR
ENST00000673035.1	alternative 5' UTR
ENST00000554788.5	alternative 5' UTR
ENST00000554845.1	alternative 5' UTR
ENST00000555804.1	alternative 5' UTR
ENST00000653425.1	Assembled from SLRseq reads (SRP049776)
ENST00000669623.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669773.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651959.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000669124.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666046.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653538.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670848.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661639.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655065.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000621441.5	MANE_select
ENST00000621441.5	upstream uORF
ENST00000261558.8	MANE_select
ENST00000431972.6	non canonical TEC
ENST00000554213.1	QC splicing correct
ENST00000556377.1	alternative 3' UTR
ENST00000653043.1	Assembled from SLRseq reads (SRP049776)
ENST00000556492.6	MANE_select
ENST00000216445.8	MANE_select
ENST00000556826.6	MANE_select
ENST00000556826.6	upstream uORF
ENST00000554729.5	upstream uORF
ENST00000557430.1	non canonical TEC
ENST00000647916.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000655475.1	Assembled from SLRseq reads (SRP049776)
ENST00000267485.7	MANE_select
ENST00000545307.6	Genoscope mRNA only
ENST00000545307.6	QC splicing correct
ENST00000555229.5	Genoscope mRNA only
ENST00000555229.5	QC splicing correct
ENST00000254286.9	MANE_select
ENST00000254286.9	non canonical polymorphism
ENST00000554402.6	non canonical polymorphism
ENST00000556694.5	non canonical polymorphism
ENST00000216455.9	MANE_select
ENST00000667365.1	Assembled from SLRseq reads (SRP049776)
ENST00000654187.1	Assembled from RACEseq reads
ENST00000355431.8	MANE_select
ENST00000424658.5	alternative 5' UTR
ENST00000360945.7	MANE_select
ENST00000395159.7	MANE_select
ENST00000555593.5	alternative 5' UTR
ENST00000555061.5	alternative 5' UTR
ENST00000555404.5	alternative 5' UTR
ENST00000555097.1	alternative 5' UTR
ENST00000354386.10	CAGE supported TSS
ENST00000652326.2	LR annotation
ENST00000652326.2	MANE_select
ENST00000395153.8	CCDS41961.1
ENST00000395153.8	MANE_select
ENST00000648996.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000666814.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654440.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663641.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667158.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662599.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658421.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658421.1	QC splicing correct
ENST00000662717.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667162.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660465.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660792.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000665985.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658062.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661873.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659718.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658696.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655931.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663442.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657369.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000556815.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655076.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659176.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666714.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000553762.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654847.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669795.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658808.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656663.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000360909.8	MANE_select
ENST00000553966.5	non canonical TEC
ENST00000247194.9	MANE_select
ENST00000616435.5	MANE_select
ENST00000537690.7	MANE_select
ENST00000537690.7	NP_001157871
ENST00000267484.10	CCDS9740
ENST00000267484.10	MANE_select
ENST00000445360.5	QC splicing correct
ENST00000570145.1	alternative 5' UTR
ENST00000568404.1	QC splicing correct
ENST00000317623.8	NP_071940.4
ENST00000406854.6	MANE_select
ENST00000406854.6	QC splicing correct
ENST00000557185.6	MANE_select
ENST00000557185.6	genebuild_only_MANE
ENST00000553986.1	QC splicing correct
ENST00000557326.1	alternative 5' UTR
ENST00000325642.7	NP_808821.2
ENST00000532036.2	not organism-supported
ENST00000395076.9	MANE_select
ENST00000528241.2	QC splicing correct
ENST00000528241.2	alternative 5' UTR
ENST00000525399.2	alternative 5' UTR
ENST00000531937.1	alternative 5' UTR
ENST00000321731.8	MANE_select
ENST00000556799.1	alternative 5' UTR
ENST00000327720.6	MANE_select
ENST00000645694.3	CAGE supported TSS
ENST00000645694.3	LR annotation
ENST00000645694.3	MANE_select
ENST00000216513.5	MANE_select
ENST00000556952.3	alternative 5' UTR
ENST00000261245.9	MANE_select
ENST00000539616.6	NP_001171434.1
ENST00000557134.1	alternative 3' UTR
ENST00000553946.1	QC splicing correct
ENST00000261249.7	MANE_select
ENST00000555420.1	CAGE supported TSS
ENST00000267488.9	MANE_select
ENST00000557294.5	alternative 5' UTR
ENST00000555868.2	MANE_select
ENST00000661303.1	Assembled from SLRseq reads (SRP049776)
ENST00000654868.1	Assembled from SLRseq reads (SRP049776)
ENST00000666850.1	Assembled from SLRseq reads (SRP049776)
ENST00000657299.1	Assembled from SLRseq reads (SRP049776)
ENST00000655460.1	Assembled from SLRseq reads (SRP049776)
ENST00000660507.1	Assembled from SLRseq reads (SRP049776)
ENST00000657687.1	Assembled from SLRseq reads (SRP049776)
ENST00000668001.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000556569.5	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000337138.9	MANE_select
ENST00000660325.1	Assembled from SLRseq reads (SRP049776)
ENST00000216294.5	MANE_select
ENST00000636344.1	NMD likely if extended
ENST00000655145.1	Assembled from RACEseq reads
ENST00000623985.3	CAGE supported TSS
ENST00000322893.12	MANE_select
ENST00000654636.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000316754.8	MANE_select
ENST00000557475.1	QC splicing correct
ENST00000621500.2	MANE_select
ENST00000337537.8	MANE_select
ENST00000394942.2	QC splicing correct
ENST00000394942.2	alternative 5' UTR
ENST00000620954.2	MANE_select
ENST00000665010.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668431.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656655.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000247225.7	MANE_select
ENST00000555002.6	CAGE supported TSS
ENST00000555002.6	MANE_select
ENST00000673869.1	CAGE supported TSS
ENST00000673797.1	CAGE supported TSS
ENST00000555241.5	CAGE supported TSS
ENST00000553801.1	CAGE supported TSS
ENST00000554572.5	alternative 5' UTR
ENST00000341099.6	MANE_select
ENST00000648279.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000545908.6	upstream ATG
ENST00000554739.5	alternative 5' UTR
ENST00000652179.1	alternative 5' UTR
ENST00000652337.1	CAGE supported TSS
ENST00000652337.1	LR annotation
ENST00000652337.1	MANE_select
ENST00000557539.1	alternative 5' UTR
ENST00000553391.2	QC splicing correct
ENST00000556284.1	QC splicing correct
ENST00000555424.1	QC splicing correct
ENST00000608382.6	MANE_select
ENST00000394715.1	alternative 5' UTR
ENST00000394718.4	MANE_select
ENST00000394718.4	alternative 5' UTR
ENST00000556818.1	NAGNAG splice site
ENST00000553583.1	alternative 5' UTR
ENST00000556965.1	alternative 5' UTR
ENST00000358738.3	NP_055765
ENST00000555321.1	alternative 5' UTR
ENST00000648003.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000467261.5	QC splicing correct
ENST00000298705.6	MANE_select
ENST00000557202.1	QC splicing correct
ENST00000555982.5	QC splicing correct
ENST00000555982.5	alternative 5' UTR
ENST00000247226.13	MANE_select
ENST00000554499.1	alternative 5' UTR
ENST00000471182.6	CAGE supported TSS
ENST00000484731.2	CAGE supported TSS
ENST00000644917.1	CAGE supported TSS
ENST00000644917.1	LR annotation
ENST00000644917.1	MANE_select
ENST00000389720.4	CAGE supported TSS
ENST00000389720.4	LR annotation
ENST00000607599.5	NP_660148.3
ENST00000549115.6	MANE_select
ENST00000549115.6	NAGNAG splice site
ENST00000549115.6	NP_001190992
ENST00000548752.6	NP_001190993
ENST00000552002.6	CAGE supported TSS
ENST00000549987.1	NP_001189488.1
ENST00000389614.6	MANE_select
ENST00000267512.9	NP_941959
ENST00000533601.7	MANE_select
ENST00000246166.3	MANE_select
ENST00000556709.1	QC splicing correct
ENST00000341653.6	NP_932061
ENST00000358664.9	MANE_select
ENST00000555932.5	Genoscope mRNA only
ENST00000555932.5	QC splicing correct
ENST00000555419.5	QC splicing correct
ENST00000557277.5	overlapping uORF
ENST00000557277.5	upstream uORF
ENST00000556892.5	upstream uORF
ENST00000246163.2	NP_660089
ENST00000556127.1	QC splicing correct
ENST00000654548.1	Assembled from SLRseq reads (SRP049776)
ENST00000662606.1	Assembled from SLRseq reads (SRP049776)
ENST00000660740.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000555736.1	QC splicing correct
ENST00000394586.6	alternative 5' UTR
ENST00000556518.5	alternative 5' UTR
ENST00000557164.5	NP_004471.4
ENST00000555559.5	alternative 5' UTR
ENST00000673929.1	CAGE supported TSS
ENST00000673929.1	MANE_select
ENST00000673929.1	alternative 5' UTR
ENST00000553924.5	alternative 5' UTR
ENST00000554610.1	alternative 5' UTR
ENST00000554667.1	alternative 5' UTR
ENST00000666006.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659630.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667302.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661113.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655653.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669231.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667482.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000556662.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000556291.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665713.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656725.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000557050.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671226.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670103.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000554187.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000557723.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661737.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669805.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671168.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653964.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653569.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654014.1	Assembled from SLRseq reads (SRP049776)
ENST00000555377.2	Assembled from SLRseq reads (SRP049776)
ENST00000655589.1	Assembled from SLRseq reads (SRP049776)
ENST00000389594.7	QC splicing correct
ENST00000478722.6	MANE_select
ENST00000676950.1	long_read_pipeline_2
ENST00000677222.1	align_id:3588158|asmbl_78323
ENST00000261681.9	MANE_select
ENST00000557783.1	alternative 5' UTR
ENST00000557237.1	alternative 5' UTR
ENST00000677835.1	long_read_pipeline_2
ENST00000659676.1	Assembled from RACEseq reads
ENST00000554087.5	Genoscope mRNA only
ENST00000554087.5	QC splicing correct
ENST00000216442.12	MANE_select
ENST00000555474.5	QC splicing correct
ENST00000555431.5	QC splicing correct
ENST00000555723.5	QC splicing correct
ENST00000555012.1	alternative 5' UTR
ENST00000256383.11	MANE_select
ENST00000256383.11	upstream uORF
ENST00000557310.5	alternative 5' UTR
ENST00000466499.6	alternative 5' UTR
ENST00000555876.1	not organism-supported
ENST00000216446.9	MANE_select
ENST00000553387.1	QC splicing correct
ENST00000557388.1	QC splicing correct
ENST00000555638.5	QC splicing correct
ENST00000329153.10	MANE_select
ENST00000216452.9	MANE_select
ENST00000560722.5	NAGNAG splice site
ENST00000261783.4	MANE_select
ENST00000662787.1	Assembled from SLRseq reads (SRP049776)
ENST00000554659.6	MANE_select
ENST00000381346.9	MANE_select
ENST00000551171.6	MANE_select
ENST00000347230.9	MANE_select
ENST00000485181.5	alternative 5' UTR
ENST00000553334.1	alternative 5' UTR
ENST00000661958.1	Assembled from SLRseq reads (SRP049776)
ENST00000663643.1	Assembled from SLRseq reads (SRP049776)
ENST00000659224.1	Assembled from SLRseq reads (SRP049776)
ENST00000439696.3	MANE_select
ENST00000336440.3	alternative 3' UTR
ENST00000394419.9	MANE_select
ENST00000376839.7	upstream uORF
ENST00000544964.6	QC splicing correct
ENST00000341516.10	MANE_select
ENST00000554215.5	alternative 5' UTR
ENST00000556847.5	QC splicing correct
ENST00000554681.1	alternative 5' UTR
ENST00000653782.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000409675.5	alternative 5' UTR
ENST00000409949.5	alternative 5' UTR
ENST00000409242.5	alternative 5' UTR
ENST00000413191.1	alternative 5' UTR
ENST00000448469.8	MANE_select
ENST00000448469.8	alternative 3' UTR
ENST00000553471.6	non canonical conserved
ENST00000557016.6	MANE_select
ENST00000557697.1	QC splicing correct
ENST00000031146.8	QC splicing correct
ENST00000336643.10	MANE_select
ENST00000668822.1	Assembled from SLRseq reads (SRP049776)
ENST00000322564.9	MANE_select
ENST00000599174.3	MANE_select
ENST00000656285.1	Assembled from SLRseq reads (SRP049776)
ENST00000342745.5	MANE_select
ENST00000557154.6	MANE_select
ENST00000216540.5	MANE_select
ENST00000361956.8	MANE_select
ENST00000356921.7	MANE_select
ENST00000394330.6	NP_891981.1
ENST00000534137.5	NP_489479.1
ENST00000528359.5	NP_150287.1
ENST00000555198.1	QC splicing correct
ENST00000658757.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000655620.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000553791.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000389912.7	MANE_select
ENST00000256366.6	MANE_select
ENST00000679631.1	CAGE supported TSS
ENST00000679631.1	alternative 5' UTR
ENST00000603540.2	MANE_select
ENST00000649019.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000256389.5	MANE_select
ENST00000256389.5	upstream ATG
ENST00000256379.10	MANE_select
ENST00000556044.5	QC splicing correct
ENST00000256367.3	MANE_select
ENST00000554752.7	MANE_select
ENST00000555993.6	NP_149132.2
ENST00000554024.1	QC splicing correct
ENST00000557691.2	Assembled from SLRseq reads (SRP049776)
ENST00000661317.1	Assembled from SLRseq reads (SRP049776)
ENST00000653562.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000304743.7	MANE_select
ENST00000661959.1	Assembled from RACEseq reads
ENST00000663930.1	Assembled from SLRseq reads (SRP049776)
ENST00000666109.1	Assembled from SLRseq reads (SRP049776)
ENST00000662547.1	Assembled from SLRseq reads (SRP049776)
ENST00000557151.5	alternative 5' UTR
ENST00000358550.6	NAGNAG splice site
ENST00000647653.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000647803.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000655301.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656145.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660822.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000553525.6	MANE_select
ENST00000656476.1	Assembled from SLRseq reads (SRP049776)
ENST00000555303.1	QC splicing correct
ENST00000650335.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000358377.7	MANE_select
ENST00000394234.6	NP_851937.1
ENST00000509153.5	NP_851938.2
ENST00000514486.5	QC splicing correct
ENST00000556143.6	MANE_select
ENST00000555072.1	alternative 5' UTR
ENST00000527432.5	alternative 5' UTR
ENST00000531500.5	alternative 5' UTR
ENST00000261973.12	MANE_select
ENST00000525161.5	alternative 5' UTR
ENST00000557356.5	alternative 5' UTR
ENST00000556864.5	alternative 5' UTR
ENST00000556533.5	alternative 5' UTR
ENST00000556951.5	alternative 5' UTR
ENST00000557293.5	alternative 5' UTR
ENST00000553719.5	alternative 5' UTR
ENST00000553599.5	alternative 5' UTR
ENST00000560005.6	alternative 5' UTR
ENST00000555254.5	alternative 5' UTR
ENST00000553447.6	NMD likely if extended
ENST00000554131.5	alternative 5' UTR
ENST00000324501.10	MANE_select
ENST00000557037.5	alternative 5' UTR
ENST00000394164.5	alternative 5' UTR
ENST00000556066.1	alternative 5' UTR
ENST00000644200.2	MANE_select
ENST00000644200.2	alternative 5' UTR
ENST00000356296.8	alternative 5' UTR
ENST00000555307.5	alternative 5' UTR
ENST00000554394.5	alternative 5' UTR
ENST00000554818.5	alternative 5' UTR
ENST00000654900.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666612.1	Assembled from SLRseq reads (SRP049776)
ENST00000565094.1	QC splicing correct
ENST00000553558.6	MANE_select
ENST00000553558.6	alternative 5' UTR
ENST00000556455.1	alternative 5' UTR
ENST00000557603.1	alternative 5' UTR
ENST00000304061.8	MANE_select
ENST00000311148.9	MANE_select
ENST00000664243.1	Assembled from SLRseq reads (SRP049776)
ENST00000238651.10	MANE_select
ENST00000613168.1	CAGE supported TSS
ENST00000326303.5	MANE_select
ENST00000554229.1	alternative 5' UTR
ENST00000645972.2	MANE_select
ENST00000645972.2	NP_001352717.1
ENST00000645972.2	not best-in-genome evidence
ENST00000554113.5	alternative 5' UTR
ENST00000553645.7	MANE_select
ENST00000555631.6	alternative 5' UTR
ENST00000555919.7	QC splicing correct
ENST00000555919.7	alternative 5' UTR
ENST00000554339.5	QC splicing correct
ENST00000554871.5	NP_001188295
ENST00000559993.1	alternative 5' UTR
ENST00000557304.1	QC splicing correct
ENST00000316836.5	MANE_select
ENST00000435371.1	alternative 5' UTR
ENST00000421708.1	alternative 5' UTR
ENST00000668116.1	Assembled from SLRseq reads (SRP049776)
ENST00000556194.2	Assembled from SLRseq reads (SRP049776)
ENST00000555228.5	alternative 5' UTR
ENST00000267568.8	alternative 5' UTR
ENST00000553813.1	not organism-supported
ENST00000648345.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000556659.5	alternative 5' UTR
ENST00000555044.6	MANE_select
ENST00000556160.5	alternative 5' UTR
ENST00000554582.5	alternative 5' UTR
ENST00000554797.3	alternative 5' UTR
ENST00000286544.5	MANE_select
ENST00000334571.7	MANE_select
ENST00000555552.5	NMD likely if extended
ENST00000334696.11	MANE_select
ENST00000394009.5	MANE_select
ENST00000553458.6	MANE_select
ENST00000555028.6	upstream ATG
ENST00000261980.3	MANE_select
ENST00000356924.9	MANE_select
ENST00000557177.1	alternative 5' UTR
ENST00000256362.5	MANE_select
ENST00000554823.1	not organism-supported
ENST00000331628.8	MANE_select
ENST00000331628.8	genebuild_only_MANE
ENST00000554953.1	alternative 5' UTR
ENST00000434013.6	QC splicing correct
ENST00000555619.6	MANE_select
ENST00000555592.1	alternative 5' UTR
ENST00000298818.12	Genoscope mRNA only
ENST00000298818.12	QC splicing correct
ENST00000556816.6	MANE_select
ENST00000261978.9	MANE_select
ENST00000556690.5	QC splicing correct
ENST00000557425.1	non canonical TEC
ENST00000356357.9	MANE_select
ENST00000555330.5	QC splicing correct
ENST00000553279.5	QC splicing correct
ENST00000556589.5	upstream uORF
ENST00000555249.1	alternative 5' UTR
ENST00000556860.1	upstream uORF
ENST00000341162.8	MANE_select
ENST00000325680.12	MANE_select
ENST00000325680.12	confirm experimentally
ENST00000619947.1	alternative 5' UTR
ENST00000556460.5	NAGNAG splice site
ENST00000238671.11	NAGNAG splice site
ENST00000334220.9	MANE_select
ENST00000555988.1	QC splicing correct
ENST00000557413.6	MANE_select
ENST00000555647.5	alternative 5' UTR
ENST00000554900.1	not organism-supported
ENST00000556776.1	alternative 5' UTR
ENST00000238607.10	NAGNAG splice site
ENST00000266126.10	MANE_select
ENST00000355774.7	CAGE supported TSS
ENST00000355774.7	MANE_select
ENST00000553713.5	QC splicing correct
ENST00000556257.5	QC splicing correct
ENST00000556453.5	QC splicing correct
ENST00000555671.1	QC splicing correct
ENST00000553263.1	alternative 5' UTR
ENST00000557648.1	alternative 5' UTR
ENST00000238618.8	MANE_select
ENST00000555694.5	alternative 5' UTR
ENST00000534151.1	alternative 5' UTR
ENST00000674097.1	alternative 5' UTR
ENST00000674017.1	alternative 5' UTR
ENST00000238686.8	NP_001317120.1
ENST00000554763.2	alternative 5' UTR
ENST00000524913.3	MANE_select
ENST00000525046.2	alternative 5' UTR
ENST00000674086.1	alternative 5' UTR
ENST00000526130.2	alternative 5' UTR
ENST00000238616.10	MANE_select
ENST00000678037.1	align_id:3589606|asmbl_79771
ENST00000678531.1	align_id:3589608|asmbl_79773
ENST00000678531.1	alternative 5' UTR
ENST00000678749.1	EnsCodingFull|3P|XLOC_021643|TCONS_00089075:22.1008
ENST00000678749.1	upstream uORF
ENST00000677700.1	CHS.15950.16
ENST00000676711.1	align_id:3589647|asmbl_79812
ENST00000676476.1	align_id:3589672|asmbl_79837
ENST00000553823.6	align_id:3589632|asmbl_79797
ENST00000557673.6	align_id:3589657|asmbl_79822
ENST00000677411.1	align_id:3589655|asmbl_79820
ENST00000553945.1	not organism-supported
ENST00000303575.9	MANE_select
ENST00000303562.9	MANE_select
ENST00000555686.1	overlapping uORF
ENST00000555686.1	upstream uORF
ENST00000555672.1	overlapping uORF
ENST00000555672.1	upstream uORF
ENST00000555347.1	overlapping uORF
ENST00000561000.1	QC splicing correct
ENST00000558575.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665235.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669323.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000419727.6	alternative 5' UTR
ENST00000651602.1	MANE_select
ENST00000651602.1	genebuild_only_MANE
ENST00000559060.5	alternative 5' UTR
ENST00000286639.8	MANE_select
ENST00000238667.9	MANE_select
ENST00000298832.14	MANE_select
ENST00000256319.7	MANE_select
ENST00000649987.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000679083.1	500872
ENST00000314067.11	MANE_select
ENST00000238682.8	CAGE supported TSS
ENST00000238682.8	MANE_select
ENST00000556674.2	alternative 5' UTR
ENST00000555193.1	alternative 5' UTR
ENST00000557542.5	alternative 5' UTR
ENST00000556109.1	alternative 5' UTR
ENST00000261530.12	MANE_select
ENST00000556663.5	alternative 5' UTR
ENST00000512784.6	CAGE supported TSS
ENST00000512784.6	QC splicing correct
ENST00000644823.1	CAGE supported TSS
ENST00000644823.1	MANE_select
ENST00000167106.9	MANE_select
ENST00000251089.8	MANE_select
ENST00000556298.1	alternative 5' UTR
ENST00000557497.1	alternative 5' UTR
ENST00000665762.1	Assembled from SLRseq reads (SRP049776)
ENST00000216450.7	FLJ25377
ENST00000484640.5	FLJ43734
ENST00000647580.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000238647.5	MANE_select
ENST00000554043.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660008.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660476.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660156.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658895.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658879.1	Assembled from SLRseq reads (SRP049776)
ENST00000361786.7	MANE_select
ENST00000554658.5	alternative 5' UTR
ENST00000557115.5	alternative 5' UTR
ENST00000554447.5	alternative 5' UTR
ENST00000555200.1	alternative 5' UTR
ENST00000557408.5	alternative 5' UTR
ENST00000555338.5	alternative 5' UTR
ENST00000556514.5	alternative 5' UTR
ENST00000554766.5	alternative 5' UTR
ENST00000298351.5	MANE_select
ENST00000554346.5	alternative 5' UTR
ENST00000319374.4	MANE_select
ENST00000555389.1	alternative 5' UTR
ENST00000555327.1	alternative 5' UTR
ENST00000261534.9	MANE_select
ENST00000557639.5	alternative 5' UTR
ENST00000216465.10	MANE_select
ENST00000554846.5	alternative 5' UTR
ENST00000555583.1	alternative 5' UTR
ENST00000216468.8	MANE_select
ENST00000555603.1	alternative 5' UTR
ENST00000343765.6	alternative 5' UTR
ENST00000557658.6	MANE_select
ENST00000557658.6	alternative 5' UTR
ENST00000557466.1	alternative 5' UTR
ENST00000216479.8	MANE_select
ENST00000556369.1	QC splicing correct
ENST00000342219.9	MANE_select
ENST00000216484.7	MANE_select
ENST00000216489.8	MANE_select
ENST00000557342.6	MANE_select
ENST00000261531.12	MANE_select
ENST00000554775.5	Genoscope mRNA only
ENST00000554775.5	QC splicing correct
ENST00000650032.1	CAGE supported TSS
ENST00000238561.10	MANE_select
ENST00000557501.5	Genoscope mRNA only
ENST00000557501.5	QC splicing correct
ENST00000556560.5	Genoscope mRNA only
ENST00000556560.5	QC splicing correct
ENST00000335750.7	CAGE supported TSS
ENST00000335750.7	MANE_select
ENST00000554738.5	NMD exception
ENST00000554719.5	CAGE supported TSS
ENST00000557081.1	alternative 5' UTR
ENST00000676811.1	NMD exception
ENST00000555387.1	NMD exception
ENST00000667942.1	Assembled from SLRseq reads (SRP049776)
ENST00000438257.9	MANE_select
ENST00000438257.9	alternative 5' UTR
ENST00000554188.5	alternative 5' UTR
ENST00000553968.1	alternative 5' UTR
ENST00000553594.1	alternative 5' UTR
ENST00000555265.6	MANE_select
ENST00000555529.5	alternative 5' UTR
ENST00000556042.5	alternative 5' UTR
ENST00000556981.5	alternative 5' UTR
ENST00000298171.7	CAGE supported TSS
ENST00000298171.7	MANE_select
ENST00000646052.2	Assembled from SLRseq reads (SRP049776)
ENST00000654681.1	Assembled from SLRseq reads (SRP049776)
ENST00000663571.1	Assembled from SLRseq reads (SRP049776)
ENST00000652775.1	Assembled from SLRseq reads (SRP049776)
ENST00000670865.1	Assembled from SLRseq reads (SRP049776)
ENST00000553612.6	MANE_select
ENST00000556268.1	Genoscope mRNA only
ENST00000556268.1	QC splicing correct
ENST00000618431.1	CAGE supported TSS
ENST00000557055.5	alternative 5' UTR
ENST00000554710.1	alternative 5' UTR
ENST00000555001.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668972.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657354.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656095.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000336735.9	MANE_select
ENST00000554211.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653859.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670489.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648079.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000663755.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000556144.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662303.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664252.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661287.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663748.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000553760.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657900.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667773.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658091.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656622.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669510.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662642.1	Assembled from SLRseq reads (SRP049776)
ENST00000670297.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661658.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000556970.1	QC splicing correct
ENST00000655329.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659631.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000554142.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649337.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000554753.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667555.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656206.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662110.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000557155.1	QC splicing correct
ENST00000555272.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668320.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669085.1	Assembled from SLRseq reads (SRP049776)
ENST00000658182.1	Assembled from SLRseq reads (SRP049776)
ENST00000330753.6	MANE_select
ENST00000554746.1	alternative 5' UTR
ENST00000665938.1	Assembled from SLRseq reads (SRP049776)
ENST00000654941.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654590.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654590.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000654590.1	Assembled from SLRseq reads (SRP049776)
ENST00000668922.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659242.1	Assembled from SLRseq reads (SRP049776)
ENST00000663635.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667571.1	Assembled from SLRseq reads (SRP049776)
ENST00000671341.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668344.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655493.1	Assembled from SLRseq reads (SRP049776)
ENST00000662254.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668938.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659154.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665672.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656341.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665839.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666170.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669427.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656430.1	Assembled from RACEseq reads
ENST00000658687.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667623.1	Assembled from SLRseq reads (SRP049776)
ENST00000554305.5	QC splicing correct
ENST00000261304.7	MANE_select
ENST00000554916.5	QC splicing correct
ENST00000267549.5	MANE_select
ENST00000557631.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000556684.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671337.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658103.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653288.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667558.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660520.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655699.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658529.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659115.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671685.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667759.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659391.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656156.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671064.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653115.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664613.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663527.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000555996.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658802.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664905.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670645.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660394.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670811.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669790.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658614.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664272.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662785.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661820.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671198.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656018.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665901.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670670.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665065.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654646.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668342.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654427.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669313.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670474.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657214.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669517.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653202.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662577.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659555.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669569.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664331.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000664916.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668853.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670285.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656485.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660504.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660271.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658873.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660665.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660744.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671585.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667100.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653337.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654359.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666809.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661299.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000671063.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664976.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655185.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656043.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659330.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662720.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666156.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655110.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658804.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662304.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656466.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663488.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654831.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653532.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654510.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670733.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656986.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654022.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000556789.1	QC splicing correct
ENST00000319231.10	MANE_select
ENST00000393545.9	MANE_select
ENST00000556564.6	MANE_select
ENST00000555243.1	alternative 5' UTR
ENST00000554602.5	alternative 5' UTR
ENST00000649731.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000557607.5	QC splicing correct
ENST00000555799.5	alternative 5' UTR
ENST00000251038.10	MANE_select
ENST00000557693.5	alternative 5' UTR
ENST00000555120.1	alternative 5' UTR
ENST00000557605.1	QC splicing correct
ENST00000554922.5	QC splicing correct
ENST00000380656.7	CAGE supported TSS
ENST00000380656.7	MANE_select
ENST00000557580.3	QC splicing correct
ENST00000557258.6	MANE_select
ENST00000555010.1	QC splicing correct
ENST00000557496.1	QC splicing correct
ENST00000555855.5	alternative 5' UTR
ENST00000555034.5	alternative 5' UTR
ENST00000553904.1	alternative 5' UTR
ENST00000662923.1	Assembled from SLRseq reads (SRP049776)
ENST00000316738.12	MANE_select
ENST00000554180.5	alternative 5' UTR
ENST00000335725.9	MANE_select
ENST00000393454.6	alternative 5' UTR
ENST00000556867.1	alternative 5' UTR
ENST00000553527.1	alternative 5' UTR
ENST00000553989.1	alternative 5' UTR
ENST00000556498.1	alternative 5' UTR
ENST00000282146.5	MANE_select
ENST00000261303.13	MANE_select
ENST00000354366.8	MANE_select
ENST00000654072.1	Assembled from SLRseq reads (SRP049776)
ENST00000615251.1	CAGE supported TSS
ENST00000557020.5	alternative 5' UTR
ENST00000447653.8	upstream ATG
ENST00000356978.9	LR annotation
ENST00000356978.9	MANE_select
ENST00000553630.1	Genoscope mRNA only
ENST00000553630.1	QC splicing correct
ENST00000553542.5	alternative 5' UTR
ENST00000663135.1	upstream ATG
ENST00000668106.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653766.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660562.1	Assembled from SLRseq reads (SRP049776)
ENST00000654358.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658034.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654381.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668126.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661823.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000444942.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663901.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657082.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663564.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654220.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666845.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666767.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658892.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659099.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656418.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655041.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647570.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000328459.11	MANE_select
ENST00000554462.1	QC splicing correct
ENST00000557007.1	QC splicing correct
ENST00000662027.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663297.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659138.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671606.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000614987.5	MANE_select
ENST00000648062.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000556178.5	QC splicing correct
ENST00000521334.5	alternative 5' UTR
ENST00000522837.5	alternative 5' UTR
ENST00000518871.5	alternative 5' UTR
ENST00000521081.5	alternative 5' UTR
ENST00000524232.5	alternative 5' UTR
ENST00000522170.5	alternative 5' UTR
ENST00000256324.15	MANE_select
ENST00000519950.5	alternative 5' UTR
ENST00000523879.5	alternative 5' UTR
ENST00000518868.5	alternative 5' UTR
ENST00000517518.5	alternative 5' UTR
ENST00000428926.6	alternative 5' UTR
ENST00000517362.5	alternative 5' UTR
ENST00000523894.5	alternative 5' UTR
ENST00000522322.5	alternative 5' UTR
ENST00000523771.5	alternative 5' UTR
ENST00000521064.5	alternative 5' UTR
ENST00000557303.1	QC splicing correct
ENST00000650645.1	MANE_select
ENST00000650645.1	genebuild_only_MANE
ENST00000529102.1	alternative 5' UTR
ENST00000529300.1	QC splicing correct
ENST00000668819.1	Assembled from SLRseq reads (SRP049776)
ENST00000653313.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000389857.11	MANE_select
ENST00000389857.11	QC splicing correct
ENST00000554943.6	MANE_select
ENST00000557018.5	alternative 5' UTR
ENST00000554511.1	alternative 5' UTR
ENST00000256343.8	MANE_select
ENST00000554560.5	alternative 5' UTR
ENST00000556661.5	alternative 5' UTR
ENST00000553676.1	QC splicing correct
ENST00000553676.1	alternative 5' UTR
ENST00000435962.7	MANE_select
ENST00000340892.9	alternative 5' UTR
ENST00000360594.9	alternative 5' UTR
ENST00000342058.9	MANE_select
ENST00000554468.5	alternative 5' UTR
ENST00000267622.8	MANE_select
ENST00000555516.6	QC splicing correct
ENST00000644486.2	CAGE supported TSS
ENST00000644486.2	LR annotation
ENST00000644486.2	MANE_select
ENST00000503767.5	NP_001121168.1
ENST00000340660.10	NP_001121169
ENST00000554592.5	NAGNAG splice site
ENST00000556315.6	NAGNAG splice site
ENST00000605997.6	CAGE supported TSS
ENST00000605997.6	MANE_select
ENST00000329559.8	CAGE supported TSS
ENST00000556555.1	QC splicing correct
ENST00000298875.9	MANE_select
ENST00000553427.5	alternative 5' UTR
ENST00000660615.1	Assembled from SLRseq reads (SRP049776)
ENST00000532405.6	CAGE supported TSS
ENST00000532405.6	MANE_select
ENST00000532405.6	NP_705932.2
ENST00000676001.1	alternative 5' UTR
ENST00000531433.5	NP_705933.2
ENST00000216487.12	MANE_select
ENST00000555699.5	Genoscope mRNA only
ENST00000555699.5	QC splicing correct
ENST00000334869.9	MANE_select
ENST00000557434.5	QC splicing correct
ENST00000393218.6	alternative 5' UTR
ENST00000557609.5	Genoscope mRNA only
ENST00000557609.5	QC splicing correct
ENST00000554397.5	alternative 5' UTR
ENST00000554919.5	QC splicing correct
ENST00000554919.5	alternative 5' UTR
ENST00000554080.5	alternative 5' UTR
ENST00000553371.1	alternative 5' UTR
ENST00000553918.1	alternative 5' UTR
ENST00000163416.7	MANE_select
ENST00000556466.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000553485.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000216492.10	MANE_select
ENST00000556076.5	QC splicing correct
ENST00000267615.11	MANE_select
ENST00000556603.6	alternative 5' UTR
ENST00000553452.5	alternative 5' UTR
ENST00000557309.1	alternative 5' UTR
ENST00000298894.5	MANE_select
ENST00000556883.1	alternative 5' UTR
ENST00000415050.3	MANE_select
ENST00000306954.5	MANE_select
ENST00000013070.11	MANE_select
ENST00000334746.10	MANE_select
ENST00000555525.1	Genoscope mRNA only
ENST00000555525.1	QC splicing correct
ENST00000554968.1	alternative 5' UTR
ENST00000555664.5	QC splicing correct
ENST00000342144.3	MANE_select
ENST00000393140.6	MANE_select
ENST00000555732.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000557719.1	alternative 5' UTR
ENST00000554404.1	alternative 5' UTR
ENST00000557000.2	alternative 5' UTR
ENST00000555019.6	MANE_select
ENST00000658797.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000455802.5	NMD likely if extended
ENST00000455802.5	QC splicing correct
ENST00000636493.2	MANE_select
ENST00000449472.1	NMD likely if extended
ENST00000203664.10	MANE_select
ENST00000621632.5	MANE_select
ENST00000555523.6	MANE_select
ENST00000393115.7	alternative 5' UTR
ENST00000555341.5	alternative 5' UTR
ENST00000614204.4	alternative 5' UTR
ENST00000611954.4	alternative 5' UTR
ENST00000618200.4	alternative 5' UTR
ENST00000621160.4	alternative 5' UTR
ENST00000555819.5	alternative 5' UTR
ENST00000238609.4	MANE_select
ENST00000304338.8	MANE_select
ENST00000553661.5	alternative 5' UTR
ENST00000261994.9	MANE_select
ENST00000554173.1	alternative 5' UTR
ENST00000341584.4	MANE_select
ENST00000557225.1	alternative 5' UTR
ENST00000393087.9	CAGE supported TSS
ENST00000393087.9	LR annotation
ENST00000393087.9	MANE_select
ENST00000393087.9	alternative 5' UTR
ENST00000636712.1	alternative 5' UTR
ENST00000393088.8	alternative 5' UTR
ENST00000404814.8	alternative 5' UTR
ENST00000449399.7	alternative 5' UTR
ENST00000556091.1	alternative 5' UTR
ENST00000557492.5	alternative 5' UTR
ENST00000556955.5	alternative 5' UTR
ENST00000553327.5	alternative 5' UTR
ENST00000557118.5	alternative 5' UTR
ENST00000334708.4	MANE_select
ENST00000298845.12	upstream ATG
ENST00000674397.2	MANE_select
ENST00000674397.2	upstream ATG
ENST00000380365.7	upstream ATG
ENST00000556881.5	alternative 5' UTR
ENST00000677451.1	MANE_select
ENST00000658195.1	Assembled from SLRseq reads (SRP049776)
ENST00000557004.6	MANE_select
ENST00000557004.6	alternative 5' UTR
ENST00000298841.5	alternative 5' UTR
ENST00000554220.5	alternative 5' UTR
ENST00000554866.5	alternative 5' UTR
ENST00000556775.5	alternative 5' UTR
ENST00000553511.1	alternative 5' UTR
ENST00000329597.12	CAGE supported TSS
ENST00000329597.12	LR annotation
ENST00000329597.12	MANE_select
ENST00000329597.12	alternative 5' UTR
ENST00000554633.5	alternative 5' UTR
ENST00000555681.1	alternative 5' UTR
ENST00000554276.1	alternative 5' UTR
ENST00000557598.1	alternative 5' UTR
ENST00000656621.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000555820.1	QC splicing correct
ENST00000555820.1	alternative 5' UTR
ENST00000393078.5	MANE_select
ENST00000393078.5	alternative 5' UTR
ENST00000467132.5	alternative 5' UTR
ENST00000238558.5	MANE_select
ENST00000643862.2	LF213300
ENST00000554033.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000554033.2	QC splicing correct
ENST00000343455.8	MANE_select
ENST00000526495.6	alternative 5' UTR
ENST00000393063.6	alternative 5' UTR
ENST00000527414.5	alternative 5' UTR
ENST00000674628.1	alternative 5' UTR
ENST00000529206.1	QC splicing correct
ENST00000531162.6	alternative 5' UTR
ENST00000529720.1	alternative 5' UTR
ENST00000671073.1	Assembled from SLRseq reads (SRP049776)
ENST00000654147.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654147.1	Assembled from SLRseq reads (SRP049776)
ENST00000661445.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439999.1	FLJ45244
ENST00000298912.9	MANE_select
ENST00000556441.1	QC splicing correct
ENST00000555336.6	QC splicing correct
ENST00000663706.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670233.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669056.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663377.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668821.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664645.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671353.1	Assembled from SLRseq reads (SRP049776)
ENST00000667310.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667310.1	Assembled from SLRseq reads (SRP049776)
ENST00000667668.1	Assembled from SLRseq reads (SRP049776)
ENST00000658932.1	Assembled from SLRseq reads (SRP049776)
ENST00000660378.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000331334.5	MANE_select
ENST00000659262.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671217.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663502.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663502.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000668649.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666470.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666295.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656453.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657673.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654139.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668634.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660299.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668165.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667101.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654721.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654186.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662225.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663425.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661620.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655483.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000553913.2	QC splicing correct
ENST00000340722.8	MANE_select
ENST00000402399.6	MANE_select
ENST00000402399.6	genebuild_only_MANE
ENST00000556450.5	alternative 3' UTR
ENST00000557043.4	NMD likely if extended
ENST00000554119.5	QC splicing correct
ENST00000554119.5	alternative 3' UTR
ENST00000556156.1	alternative 3' UTR
ENST00000555202.1	alternative 3' UTR
ENST00000670276.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658777.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000503525.2	upstream uORF
ENST00000555004.3	MANE_select
ENST00000556728.1	alternative 3' UTR
ENST00000542454.2	alternative 5' UTR
ENST00000554311.2	MANE_select
ENST00000216629.11	MANE_select
ENST00000359933.6	MANE_select
ENST00000553699.5	alternative 5' UTR
ENST00000554182.5	alternative 5' UTR
ENST00000555181.6	MANE_select
ENST00000555181.6	alternative 5' UTR
ENST00000555757.1	alternative 5' UTR
ENST00000267584.9	MANE_select
ENST00000569214.1	confirm experimentally
ENST00000660184.1	Assembled from SLRseq reads (SRP049776)
ENST00000660802.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655504.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000553378.1	confirm experimentally
ENST00000647663.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000666373.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659801.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657003.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665251.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000665251.1	Assembled from SLRseq reads (SRP049776)
ENST00000659974.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667340.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664902.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000555496.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656223.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663585.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655974.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654134.1	Assembled from SLRseq reads (SRP049776)
ENST00000655609.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656397.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668659.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662143.1	Assembled from SLRseq reads (SRP049776)
ENST00000664497.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650059.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000654843.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664687.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000556669.1	QC splicing correct
ENST00000654725.1	Assembled from SLRseq reads (SRP049776)
ENST00000681195.1	NAGNAG splice site
ENST00000680509.1	alternative 5' UTR
ENST00000680387.1	NAGNAG splice site
ENST00000216639.8	MANE_select
ENST00000680922.1	alternative 3' UTR
ENST00000679941.1	alternative 3' UTR
ENST00000681778.1	alternative 3' UTR
ENST00000681355.1	alternative 5' UTR
ENST00000681695.1	alternative 3' UTR
ENST00000681344.1	alternative 5' UTR
ENST00000680007.1	alternative 5' UTR
ENST00000679918.1	alternative 5' UTR
ENST00000681785.1	alternative 5' UTR
ENST00000679816.1	alternative 5' UTR
ENST00000680756.1	alternative 5' UTR
ENST00000681249.1	NAGNAG splice site
ENST00000681249.1	alternative 5' UTR
ENST00000679650.1	alternative 3' UTR
ENST00000679506.1	NAGNAG splice site
ENST00000679365.1	NAGNAG splice site
ENST00000680526.1	alternative 3' UTR
ENST00000681677.1	alternative 3' UTR
ENST00000681061.1	alternative 3' UTR
ENST00000679843.1	alternative 3' UTR
ENST00000669188.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648645.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000656331.1	Assembled from SLRseq reads (SRP049776)
ENST00000655920.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663980.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671156.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653473.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000673994.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668398.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662988.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662945.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000555187.1	QC splicing correct
ENST00000557296.1	alternative 5' UTR
ENST00000499006.7	Assembled from SLRseq reads (SRP049776)
ENST00000662096.1	Assembled from SLRseq reads (SRP049776)
ENST00000652825.1	Assembled from SLRseq reads (SRP049776)
ENST00000554822.6	Assembled from SLRseq reads (SRP049776)
ENST00000663808.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000541516.1	alternative 5' UTR
ENST00000554025.1	QC splicing correct
ENST00000659939.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000357195.8	MANE_select
ENST00000443726.2	QC splicing correct
ENST00000331768.10	MANE_select
ENST00000446066.5	QC splicing correct
ENST00000453938.1	NMD likely if extended
ENST00000389879.9	MANE_select
ENST00000557441.5	alternative 5' UTR
ENST00000555842.1	alternative 5' UTR
ENST00000555942.1	NAGNAG splice site
ENST00000380243.9	MANE_select
ENST00000555822.5	alternative 5' UTR
ENST00000554996.5	NMD likely if extended
ENST00000554877.1	alternative 5' UTR
ENST00000330710.10	MANE_select
ENST00000261835.8	MANE_select
ENST00000556199.1	NAGNAG splice site
ENST00000649352.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000555096.5	NAGNAG splice site
ENST00000262233.11	MANE_select
ENST00000556714.5	alternative 5' UTR
ENST00000556947.1	QC splicing correct
ENST00000392920.8	MANE_select
ENST00000554045.5	Genoscope mRNA only
ENST00000554045.5	QC splicing correct
ENST00000557153.5	alternative 5' UTR
ENST00000305631.7	MANE_select
ENST00000554371.1	alternative 5' UTR
ENST00000262238.10	CAGE supported TSS
ENST00000262238.10	LR annotation
ENST00000262238.10	MANE_select
ENST00000359232.8	MANE_select
ENST00000556505.5	alternative 5' UTR
ENST00000555927.5	alternative 5' UTR
ENST00000554291.5	alternative 5' UTR
ENST00000361529.5	MANE_select
ENST00000392882.7	MANE_select
ENST00000358655.8	alternative 5' UTR
ENST00000355338.6	alternative 5' UTR
ENST00000344102.9	alternative 5' UTR
ENST00000557135.5	alternative 5' UTR
ENST00000556645.5	NP_998810
ENST00000553395.5	alternative 5' UTR
ENST00000556504.5	alternative 5' UTR
ENST00000557722.5	alternative 5' UTR
ENST00000557297.5	alternative 5' UTR
ENST00000556435.5	alternative 5' UTR
ENST00000556338.5	alternative 5' UTR
ENST00000556698.5	alternative 5' UTR
ENST00000553524.5	alternative 5' UTR
ENST00000554772.5	alternative 5' UTR
ENST00000556660.5	alternative 5' UTR
ENST00000553413.5	NAGNAG splice site
ENST00000553413.5	alternative 5' UTR
ENST00000553769.6	alternative 5' UTR
ENST00000553545.5	alternative 5' UTR
ENST00000554820.5	alternative 5' UTR
ENST00000556209.5	alternative 5' UTR
ENST00000554605.5	alternative 5' UTR
ENST00000555813.5	alternative 5' UTR
ENST00000556695.5	alternative 5' UTR
ENST00000556295.5	alternative 5' UTR
ENST00000555031.5	alternative 5' UTR
ENST00000553934.1	alternative 5' UTR
ENST00000553581.1	alternative 5' UTR
ENST00000554998.5	alternative 5' UTR
ENST00000335290.10	alternative 5' UTR
ENST00000556080.2	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000556188.5	alternative 5' UTR
ENST00000554356.5	CAGE supported TSS
ENST00000554356.5	alternative 5' UTR
ENST00000557378.5	alternative 5' UTR
ENST00000655680.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656919.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663191.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000553367.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671653.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000392848.9	alternative 5' UTR
ENST00000341267.9	CAGE supported TSS
ENST00000341267.9	LR annotation
ENST00000341267.9	MANE_select
ENST00000648456.1	NR_046465.2
ENST00000654077.1	Assembled from SLRseq reads (SRP049776)
ENST00000429159.6	NR_002766
ENST00000429159.6	PMID:10759892
ENST00000452120.7	Assembled from SLRseq reads (SRP049776)
ENST00000520714.5	NR_003531
ENST00000520714.5	PMID:10759892
ENST00000424076.9	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000522771.9	CAGE supported TSS
ENST00000522771.9	LR annotation
ENST00000412736.7	CAGE supported TSS
ENST00000412736.7	LR annotation
ENST00000423456.6	CAGE supported TSS
ENST00000423456.6	LR annotation
ENST00000423456.6	NR_003530
ENST00000423456.6	PMID:10759892
ENST00000519709.6	CAGE supported TSS
ENST00000519709.6	LR annotation
ENST00000662362.1	Assembled from SLRseq reads (SRP049776)
ENST00000649591.1	CAGE supported TSS
ENST00000649591.1	LR annotation
ENST00000649591.1	MANE_select
ENST00000638012.2	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000427085.6	QC splicing correct
ENST00000661496.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656987.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666001.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655773.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665015.1	Assembled from RACEseq reads
ENST00000662832.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670454.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000554693.4	Assembled from SLRseq reads (SRP049776)
ENST00000662228.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668595.1	Assembled from SLRseq reads (SRP049776)
ENST00000670877.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654340.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664819.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657772.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661815.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658511.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668545.1	Assembled from SLRseq reads (SRP049776)
ENST00000665822.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665822.1	Assembled from SLRseq reads (SRP049776)
ENST00000452349.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665682.1	Assembled from SLRseq reads (SRP049776)
ENST00000654748.1	Assembled from SLRseq reads (SRP049776)
ENST00000670595.1	Assembled from SLRseq reads (SRP049776)
ENST00000653934.1	Assembled from SLRseq reads (SRP049776)
ENST00000553561.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669400.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665068.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670271.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000553318.1	QC splicing correct
ENST00000554735.1	TEC
ENST00000554735.1	confirm experimentally
ENST00000510508.4	NP_001353.4
ENST00000510508.4	downstream ATG
ENST00000557268.5	NP_001155197.1
ENST00000556086.1	QC splicing correct
ENST00000350249.7	NP_848701.1
ENST00000557621.5	QC splicing correct
ENST00000554137.5	QC splicing correct
ENST00000360184.10	MANE_select
ENST00000216281.13	MANE_select
ENST00000558600.1	NAGNAG splice site
ENST00000342702.8	MANE_select
ENST00000556511.2	NP_851825.1
ENST00000361847.7	MANE_select
ENST00000522867.1	Genoscope mRNA only
ENST00000522867.1	QC splicing correct
ENST00000519477.5	QC splicing correct
ENST00000521388.5	QC splicing correct
ENST00000562292.5	QC splicing correct
ENST00000559185.5	alternative 5' UTR
ENST00000442396.7	MANE_select
ENST00000560326.1	QC splicing correct
ENST00000216756.11	MANE_select
ENST00000359520.12	MANE_select
ENST00000558678.1	NP_001166102.1
ENST00000286918.9	MANE_select
ENST00000559651.1	alternative 5' UTR
ENST00000560748.5	alternative 5' UTR
ENST00000559404.5	alternative 5' UTR
ENST00000557902.1	alternative 5' UTR
ENST00000262241.7	MANE_select
ENST00000392745.8	MANE_select
ENST00000392745.8	alternative 5' UTR
ENST00000560463.5	alternative 5' UTR
ENST00000299155.10	MANE_select
ENST00000361246.7	MANE_select
ENST00000634353.1	MANE_select
ENST00000333007.8	CAGE supported TSS
ENST00000558056.1	QC splicing correct
ENST00000558056.1	alternative 5' UTR
ENST00000560869.6	CAGE supported TSS
ENST00000560869.6	MANE_select
ENST00000559406.5	QC splicing correct
ENST00000560338.5	alternative 5' UTR
ENST00000560763.5	alternative 5' UTR
ENST00000216554.8	MANE_select
ENST00000558316.5	alternative 5' UTR
ENST00000558265.5	alternative 5' UTR
ENST00000561325.5	alternative 5' UTR
ENST00000392715.6	alternative 5' UTR
ENST00000559130.5	alternative 5' UTR
ENST00000559532.5	alternative 5' UTR
ENST00000558506.1	alternative 5' UTR
ENST00000429436.7	MANE_select
ENST00000561225.1	QC splicing correct
ENST00000558953.1	QC splicing correct
ENST00000348956.7	MANE_select
ENST00000553652.5	Genoscope mRNA only
ENST00000553652.5	QC splicing correct
ENST00000555039.1	QC splicing correct
ENST00000553878.5	alternative 5' UTR
ENST00000389749.9	MANE_select
ENST00000299204.6	MANE_select
ENST00000299204.6	alternative 5' UTR
ENST00000557172.5	alternative 5' UTR
ENST00000553286.5	alternative 3' UTR
ENST00000634686.1	confirm experimentally
ENST00000445352.8	Genoscope mRNA only
ENST00000445352.8	QC splicing correct
ENST00000409074.8	CAGE supported TSS
ENST00000409074.8	MANE_select
ENST00000409074.8	upstream ATG
ENST00000440963.2	upstream ATG
ENST00000458117.6	upstream ATG
ENST00000556253.6	upstream ATG
ENST00000476323.5	QC splicing correct
ENST00000554876.5	QC splicing correct
ENST00000472726.3	upstream ATG
ENST00000554913.5	alternative 5' UTR
ENST00000555055.6	MANE_select
ENST00000555055.6	alternative 5' UTR
ENST00000352127.11	QC splicing correct
ENST00000553264.5	alternative 5' UTR
ENST00000556980.5	QC splicing correct
ENST00000556980.5	alternative 5' UTR
ENST00000555964.5	alternative 5' UTR
ENST00000556682.5	alternative 5' UTR
ENST00000553332.5	alternative 5' UTR
ENST00000311141.7	MANE_select
ENST00000647748.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000202556.14	MANE_select
ENST00000556325.1	QC splicing correct
ENST00000658303.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660176.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667526.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654695.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000286953.8	MANE_select
ENST00000554880.5	alternative 5' UTR
ENST00000557040.5	alternative 5' UTR
ENST00000409874.9	MANE_select
ENST00000557640.2	MANE_select
ENST00000648118.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000551177.6	MANE_select
ENST00000423312.6	QC splicing correct
ENST00000662137.1	Assembled from SLRseq reads (SRP049776)
ENST00000556573.6	MANE_select
ENST00000557649.6	MANE_select
ENST00000557649.6	alternative 5' UTR
ENST00000675743.1	CAGE supported TSS
ENST00000675743.1	Snaptron_GTEX
ENST00000674723.1	CAGE supported TSS
ENST00000674723.1	Snaptron_GTEX
ENST00000674723.1	alternative 5' UTR
ENST00000674869.1	Snaptron_GTEX
ENST00000674869.1	alternative 5' UTR
ENST00000675248.1	CAGE supported TSS
ENST00000675248.1	Snaptron_GTEX
ENST00000675248.1	alternative 5' UTR
ENST00000675248.1	intropolis_filtered
ENST00000676427.1	CAGE supported TSS
ENST00000676427.1	Snaptron_GTEX
ENST00000676427.1	alternative 5' UTR
ENST00000392634.9	MANE_select
ENST00000675482.1	Snaptron_GTEX
ENST00000675482.1	alternative 5' UTR
ENST00000675482.1	intropolis_filtered
ENST00000675482.1	upstream ATG
ENST00000674966.1	NMD likely if extended
ENST00000674966.1	Snaptron_GTEX_
ENST00000674966.1	alternative 5' UTR
ENST00000675207.1	CAGE supported TSS
ENST00000675207.1	Ensembl_RNAseq_introns
ENST00000675207.1	Snaptron_GTEX
ENST00000675207.1	intropolis_filtered
ENST00000675616.1	Snaptron_GTEX
ENST00000675313.1	Snaptron_GTEX
ENST00000676100.1	Ensembl_RNAseq_introns
ENST00000676100.1	Snaptron_GTEX
ENST00000674994.1	Snaptron_GTEX
ENST00000674994.1	intropolis_filtered
ENST00000675797.1	Snaptron_GTEX
ENST00000675771.1	Snaptron_GTEX
ENST00000674991.1	Snaptron_GTEX
ENST00000675809.1	Ensembl_RNAseq_introns
ENST00000675809.1	Snaptron_GTEX
ENST00000674520.1	Nanopore
ENST00000674520.1	Snaptron_GTEX
ENST00000674846.1	Snaptron_GTEX
ENST00000675583.1	Snaptron_GTEX
ENST00000674822.1	Ensembl_RNAseq_introns
ENST00000674857.1	Snaptron_GTEX
ENST00000674960.1	Snaptron_GTEX
ENST00000675724.1	Snaptron_GTEX
ENST00000675724.1	intropolis_filtered
ENST00000676016.1	Snaptron_GTEX
ENST00000675980.1	Snaptron_GTEX
ENST00000675329.1	Ensembl_RNAseq_introns
ENST00000675329.1	Snaptron_GTEX
ENST00000674662.1	Ensembl_RNAseq_introns
ENST00000674662.1	Snaptron_GTEX
ENST00000674757.1	Ensembl_RNAseq_introns
ENST00000674757.1	Snaptron_GTEX
ENST00000675930.1	Ensembl_RNAseq_introns
ENST00000675930.1	Snaptron_GTEX
ENST00000676366.1	Snaptron_GTEX
ENST00000675481.1	NAGNAG splice site
ENST00000675481.1	Snaptron_GTEX
ENST00000617571.5	Ensembl_RNAseq_introns
ENST00000617571.5	Snaptron_GTEX
ENST00000617571.5	intropolis
ENST00000617571.5	nanopore
ENST00000675638.1	Ensembl_RNAseq_introns
ENST00000675638.1	Nanopore
ENST00000675638.1	Snaptron_GTEX
ENST00000675029.1	Nanopore_NA12878
ENST00000676134.1	NMD likely if extended
ENST00000676134.1	Snaptron_GTEX
ENST00000676134.1	intropolis_filtered
ENST00000674602.1	Snaptron_GTEX
ENST00000674602.1	intropolis_filtered
ENST00000252527.8	alternative 3' UTR
ENST00000674631.1	PacBio_Alzheimer_Brain
ENST00000675557.1	SLR-seq_TB0000033
ENST00000675603.1	Ensembl_RNAseq_introns
ENST00000675603.1	NMD likely if extended
ENST00000675603.1	intropolis_filtered
ENST00000675424.1	Ensembl_RNAseq_introns
ENST00000675424.1	Snaptron_GTEX
ENST00000674686.1	Snaptron_GTEX
ENST00000674686.1	intropolis_filtered_
ENST00000330877.7	MANE_select
ENST00000555486.5	QC splicing correct
ENST00000329967.11	MANE_select
ENST00000554581.5	alternative 5' UTR
ENST00000407796.7	alternative 5' UTR
ENST00000649815.2	CAGE supported TSS
ENST00000649815.2	MANE_select
ENST00000402615.6	alternative 5' UTR
ENST00000554848.5	alternative 5' UTR
ENST00000342537.8	MANE_select
ENST00000342537.8	alternative 5' UTR
ENST00000414716.8	MANE_select
ENST00000649344.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000392593.9	MANE_select
ENST00000333244.6	MANE_select
ENST00000547315.6	MANE_select
ENST00000336219.4	MANE_select
ENST00000392590.3	alternative 3' UTR
ENST00000329797.8	MANE_select
ENST00000539291.6	alternative 5' UTR
ENST00000549990.1	alternative 5' UTR
ENST00000655276.1	Assembled from SLRseq reads (SRP049776)
ENST00000659265.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000548361.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671592.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000655670.1	Assembled from SLRseq reads (SRP049776)
ENST00000331782.8	MANE_select
ENST00000546616.1	Genoscope mRNA only
ENST00000546616.1	QC splicing correct
ENST00000392568.7	MANE_select
ENST00000547530.7	MANE_select
ENST00000549655.5	alternative 5' UTR
ENST00000552127.5	alternative 5' UTR
ENST00000550208.1	alternative 5' UTR
ENST00000550375.1	alternative 5' UTR
ENST00000537513.6	QC splicing correct
ENST00000537513.6	alternative 5' UTR
ENST00000447393.6	MANE_select
ENST00000547217.5	QC splicing correct
ENST00000451127.3	MANE_select
ENST00000653291.1	Assembled from SLRseq reads (SRP049776)
ENST00000661026.1	Assembled from SLRseq reads (SRP049776)
ENST00000331320.12	MANE_select
ENST00000494026.1	QC splicing correct
ENST00000329146.9	MANE_select
ENST00000330233.11	alternative 5' UTR
ENST00000392531.4	MANE_select
ENST00000392531.4	alternative 5' UTR
ENST00000427614.5	alternative 5' UTR
ENST00000455454.5	alternative 5' UTR
ENST00000392527.5	alternative 5' UTR
ENST00000443229.5	alternative 5' UTR
ENST00000421892.5	alternative 5' UTR
ENST00000451719.5	alternative 5' UTR
ENST00000392523.9	MANE_select
ENST00000548920.2	non canonical TEC
ENST00000392519.7	MANE_select
ENST00000552019.1	QC splicing correct
ENST00000390539.2	This is one of the 9 functional genes of the IGHC group which comprises 11 mapped genes
ENST00000390541.2	IGHE*02, Cepsilon-1
ENST00000390541.2	This is one of the 9 functional genes of the human IGHC group which comprises 11 mapped genes
ENST00000641095.1	F
ENST00000641095.1	IGHG2*06
ENST00000390545.3	IGHG2*01. Cgamma2
ENST00000390545.3	This is one of the 9 functional genes of the IGHC group which comprises 11 mapped genes
ENST00000390547.3	IGHA1*01
ENST00000390547.3	This is one of the 9 functional genes of the human IGHC group which comprises 11 mapped genes
ENST00000390549.6	IGHG1*01, gamma-1
ENST00000390549.6	This is one of the 9 functional genes of the human IGHC group which comprises 11 mapped genes
ENST00000390542.6	This is one of the 9 functional genes of the human IGHC group which comprises 11 mapped genes
ENST00000390551.6	This is one of the 9 functional genes of the human IGHC group which comprises 11 mapped genes
ENST00000390556.6	This is one of the 9 functional genes of the human IGHC group which comprises 11 mapped genes
ENST00000390559.6	This is one of the 9 functional genes of the human IGHC group which comprises 11 mapped genes. The IGHM gene comprises four exons encoding the CH1, CH2, CH3 and CH4 domains and two transmembrane exons (M1 and M2)
ENST00000390560.2	IGHJ6*03 (4) (3)
ENST00000488476.1	IGHJ5*02 (2) (3)
ENST00000461719.1	IGHJ4*01 (1) (1)
ENST00000463911.1	IGHJ3*02 (2) (3) allele
ENST00000390564.2	IGHJ2*01 (1) (1) allele
ENST00000390565.1	IGHJ1*01 (1) (1) allele
ENST00000439842.1	IGHD7-27*01, DHQ52 allele
ENST00000390567.1	IGHD1-26*01, D1-26 allele
ENST00000452198.1	IGHD6-25*01, D6-25 allele
ENST00000390569.1	IGHD5-24*01, D5-24 allele
ENST00000390569.1	This gene is an ORF due to the presence of a non-conserved 5' D-heptamer
ENST00000437320.1	IGHD4-23*01, D4-17 allele
ENST00000437320.1	This gene is an ORF due to a non-conserved 5' D-heptamer
ENST00000390571.1	IGHD3-22*01, D21/9 allele
ENST00000390572.1	IGHD2-21*02, D2-21 allele
ENST00000450276.1	IGHD1-20*01, D1-20 allele
ENST00000390574.1	IGHD6-19*01, D6-19 allele
ENST00000390575.1	IGHD5-18*01, D5-18 allele
ENST00000431870.1	IGHD4-17*01, D4-17 allele
ENST00000390577.1	IGHD3-16*02 allele
ENST00000390578.1	IGHD2-15*01, D2 allele
ENST00000451044.1	IGHD1-14*01, DM2 allele
ENST00000451044.1	This gene is an ORF due to non-conserved 5' and 3' D-heptamers
ENST00000390580.1	IGHD6-13*01, DN1 allele
ENST00000390581.1	IGHD5-12*01, DK1 allele
ENST00000431440.2	IGHD4-11*01, DA1 allele
ENST00000431440.2	This gene is an ORF due to a non-conserved 5' D-heptamer
ENST00000390583.1	IGHD3-10*01, DXP'1 allele
ENST00000390584.1	IGHD3-9*01, DXP1 allele
ENST00000390585.1	IGHD2-8*01, DLR1 allele
ENST00000430425.1	IGHD1-7*01, DM1 allele
ENST00000454691.1	IGHD6-6*01, DN4 allele
ENST00000390588.1	IGHD5-5*01, DK4 allele
ENST00000414852.1	IGHD4-4*01, DA4 allele
ENST00000390590.1	IGHD3-3*01, DXP4 allele
ENST00000390591.1	IGHD2-2*01, D4 allele
ENST00000454908.1	IGHD1-1*01, D1-1
ENST00000606026.2	FLJ36081
ENST00000390604.2	This is one of the 3-4 mapped ORF of the IGHV3 subgroup. This is an ORF due to an unusual V-heptamer sequence: tcctgtg instead of cacagtg
ENST00000390610.2	This is one of the 9 mapped functional genes of the IGHV1 subgroup
ENST00000390617.2	This gene is an ORF due to an unusual V-heptamer: cactgtg instead of cacagtg
ENST00000390618.2	This is an ORF due to an unusual V-heptamer sequence: cacagag instead of cacagtg
ENST00000603633.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000619530.1	FLJ25367
ENST00000620337.5	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659544.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000433072.2	This is one of the 18-21 functional genes of the IGHV3 subgroup
ENST00000390639.2	This is an ORF because LPART1, V-heptamer and V-nonamer have not yet been sequenced and there is so far no known re-arranged transcript, suggesting some defect outside the V-region
ENST00000338912.5	IGHV1/OR15-9*01
ENST00000338912.5	ORF
ENST00000558824.4	IGHV1/OR15-2*03
ENST00000558824.4	P
ENST00000558565.2	IGHV3/OR15-7*05
ENST00000558565.2	P/ORF
ENST00000604642.1	IGHD5/OR15-5a*01
ENST00000604642.1	ORF
ENST00000603326.1	IGHD4/OR15-4a*01
ENST00000603326.1	ORF
ENST00000604950.1	IGHD3/OR15-3a*01
ENST00000604950.1	ORF
ENST00000603077.1	IGHD2/OR15-2a*01
ENST00000603077.1	ORF
ENST00000605284.1	OR15-1a*01
ENST00000605284.1	ORF
ENST00000566448.5	QC splicing correct
ENST00000656782.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000557528.1	QC splicing correct
ENST00000619213.1	MANE_select
ENST00000603166.1	IGHV1/OR15-6*01
ENST00000603166.1	P
ENST00000556948.1	not best-in-genome evidence
ENST00000559621.1	QC splicing correct
ENST00000454856.4	MANE_select
ENST00000654677.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665633.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658496.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657529.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660895.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666174.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668544.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670237.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665683.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653373.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662062.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668088.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000557312.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665454.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669291.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660153.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663648.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653450.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659808.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000567916.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655788.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661835.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654471.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663152.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653673.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670349.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659492.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666366.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661454.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670123.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653412.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664036.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000604446.1	IGHD5/OR15-5b*01
ENST00000604446.1	ORF
ENST00000603693.1	IGHD4/OR15-4b*01
ENST00000603693.1	ORF
ENST00000603935.1	IGHD3/OR15-3b*01
ENST00000603935.1	ORF
ENST00000604102.1	IGHD2/OR15-2b*01
ENST00000604102.1	ORF
ENST00000604838.1	IGHD1/OR15-1b*01
ENST00000604838.1	ORF
ENST00000611217.5	MANE_select
ENST00000435397.6	not best-in-genome evidence
ENST00000439682.2	MANE_select
ENST00000667004.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669194.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000640932.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000624197.2	LOC107987217
ENST00000563771.2	LOC105370722
ENST00000622949.2	LOC107987216
ENST00000630556.1	ORF
ENST00000604066.1	IGHV1/OR15-1*01
ENST00000604066.1	ORF
ENST00000628927.1	P
ENST00000564926.3	IGHV1/OR15-3*01
ENST00000564926.3	P
ENST00000557788.2	IGHV4/OR15-8
ENST00000557788.2	ORF
ENST00000622410.2	not best-in-genome evidence
ENST00000622895.1	NM_001001413.3
ENST00000560659.2	NM_001001413.3
ENST00000615383.5	MANE_select
ENST00000615383.5	corf
ENST00000620435.4	NP_001096080
ENST00000610294.1	QC splicing correct
ENST00000612085.4	NAGNAG splice site
ENST00000617928.5	MANE_select
ENST00000610365.4	alternative 5' UTR
ENST00000613006.4	alternative 5' UTR
ENST00000611832.4	alternative 5' UTR
ENST00000560205.5	alternative 5' UTR
ENST00000398014.7	Assembled from SLRseq reads (SRP049776)
ENST00000398014.7	alternative 5' UTR
ENST00000674173.1	Assembled from SLRseq reads (SRP049776)
ENST00000674173.1	alternative 5' UTR
ENST00000337451.8	MANE_select
ENST00000559571.1	alternative 5' UTR
ENST00000674289.1	Assembled from SLRseq reads (SRP049776)
ENST00000674289.1	alternative 5' UTR
ENST00000674477.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674477.1	alternative 5' UTR
ENST00000398013.7	alternative 5' UTR
ENST00000674330.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674330.1	alternative 5' UTR
ENST00000560039.1	alternative 5' UTR
ENST00000539711.2	alternative 5' UTR
ENST00000561072.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000561072.2	alternative 5' UTR
ENST00000674215.1	Assembled from SLRseq reads (SRP049776)
ENST00000674227.1	Assembled from SLRseq reads (SRP049776)
ENST00000337435.9	MANE_select
ENST00000619879.5	Assembled from SLRseq reads (SRP049776)
ENST00000450802.3	not best-in-genome evidence
ENST00000558241.1	not best-in-genome evidence
ENST00000657162.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000567107.6	MANE_select
ENST00000314520.6	CAGE supported TSS
ENST00000314520.6	MANE_select
ENST00000650528.1	LR annotation
ENST00000650528.1	MANE_select
ENST00000650528.1	NP_061939.3
ENST00000649030.2	CAGE supported TSS
ENST00000649030.2	LR annotation
ENST00000649030.2	MANE_select
ENST00000658937.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000663429.1	Assembled from SLRseq reads (SRP049776)
ENST00000657402.1	Assembled from SLRseq reads (SRP049776)
ENST00000663707.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661343.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657530.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657427.1	Assembled from RACEseq reads
ENST00000561964.1	QC splicing correct
ENST00000667431.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663854.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668025.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661593.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667702.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651552.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663548.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661971.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668898.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666127.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660695.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661140.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670841.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669910.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000565512.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670594.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661753.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662084.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669607.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665535.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655991.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666311.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669731.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000568045.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663242.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660084.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652735.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000564898.1	QC splicing correct
ENST00000568019.1	QC splicing correct
ENST00000664206.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000329468.5	MANE_select
ENST00000400100.5	alternative 5' UTR
ENST00000400097.5	alternative 5' UTR
ENST00000553597.5	alternative 5' UTR
ENST00000584968.5	alternative 5' UTR
ENST00000346403.10	alternative 5' UTR
ENST00000390687.9	MANE_select
ENST00000579070.5	alternative 5' UTR
ENST00000577565.1	alternative 5' UTR
ENST00000648546.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648546.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000577949.5	alternative 3' UTR
ENST00000659029.1	Assembled from SLRseq reads (SRP049776)
ENST00000656463.1	Assembled from SLRseq reads (SRP049776)
ENST00000640631.2	Assembled from SLRseq reads (SRP049776)
ENST00000655965.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656959.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664545.1	Assembled from SLRseq reads (SRP049776)
ENST00000668750.1	Assembled from SLRseq reads (SRP049776)
ENST00000662834.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662834.1	Assembled from SLRseq reads (SRP049776)
ENST00000667393.1	Assembled from SLRseq reads (SRP049776)
ENST00000669673.1	Assembled from SLRseq reads (SRP049776)
ENST00000656510.1	Assembled from SLRseq reads (SRP049776)
ENST00000654223.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654223.1	Assembled from SLRseq reads (SRP049776)
ENST00000549804.7	non canonical TEC
ENST00000657798.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655143.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661253.1	Assembled from SLRseq reads (SRP049776)
ENST00000660717.1	Assembled from SLRseq reads (SRP049776)
ENST00000670542.1	Assembled from SLRseq reads (SRP049776)
ENST00000664256.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655153.1	Assembled from SLRseq reads (SRP049776)
ENST00000658769.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000551077.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666289.1	Assembled from SLRseq reads (SRP049776)
ENST00000657237.1	Assembled from SLRseq reads (SRP049776)
ENST00000670394.1	Assembled from SLRseq reads (SRP049776)
ENST00000667925.1	Assembled from SLRseq reads (SRP049776)
ENST00000653407.1	Assembled from SLRseq reads (SRP049776)
ENST00000671374.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671374.1	Assembled from SLRseq reads (SRP049776)
ENST00000666606.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000665819.1	Assembled from SLRseq reads (SRP049776)
ENST00000668953.1	Assembled from SLRseq reads (SRP049776)
ENST00000660542.1	Assembled from SLRseq reads (SRP049776)
ENST00000667531.1	Assembled from SLRseq reads (SRP049776)
ENST00000654902.1	Assembled from SLRseq reads (SRP049776)
ENST00000656600.1	Assembled from SLRseq reads (SRP049776)
ENST00000662370.1	Assembled from SLRseq reads (SRP049776)
ENST00000671491.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661738.1	Assembled from SLRseq reads (SRP049776)
ENST00000553108.2	Assembled from SLRseq reads (SRP049776)
ENST00000660956.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660956.1	Assembled from SLRseq reads (SRP049776)
ENST00000665906.1	Assembled from SLRseq reads (SRP049776)
ENST00000655258.1	Assembled from SLRseq reads (SRP049776)
ENST00000667788.1	Assembled from SLRseq reads (SRP049776)
ENST00000657285.1	Assembled from SLRseq reads (SRP049776)
ENST00000655746.1	Assembled from SLRseq reads (SRP049776)
ENST00000661541.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661541.1	Assembled from SLRseq reads (SRP049776)
ENST00000658859.1	Assembled from SLRseq reads (SRP049776)
ENST00000668419.1	Assembled from RACEseq reads
ENST00000661889.1	Assembled from SLRseq reads (SRP049776)
ENST00000666022.1	Assembled from SLRseq reads (SRP049776)
ENST00000663026.1	Assembled from SLRseq reads (SRP049776)
ENST00000655993.1	Assembled from SLRseq reads (SRP049776)
ENST00000665930.1	Assembled from SLRseq reads (SRP049776)
ENST00000668163.1	Assembled from SLRseq reads (SRP049776)
ENST00000661926.1	Assembled from SLRseq reads (SRP049776)
ENST00000665547.1	Assembled from RACEseq reads
ENST00000662451.1	Assembled from SLRseq reads (SRP049776)
ENST00000669778.1	Assembled from RACEseq reads
ENST00000669778.1	Assembled from SLRseq reads (SRP049776)
ENST00000671136.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670587.1	Assembled from SLRseq reads (SRP049776)
ENST00000666955.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657850.1	Assembled from SLRseq reads (SRP049776)
ENST00000658480.1	Assembled from SLRseq reads (SRP049776)
ENST00000667390.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000669072.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663612.1	Assembled from SLRseq reads (SRP049776)
ENST00000661608.1	Assembled from SLRseq reads (SRP049776)
ENST00000661389.1	Assembled from SLRseq reads (SRP049776)
ENST00000669814.1	Assembled from RACEseq reads
ENST00000669814.1	Assembled from SLRseq reads (SRP049776)
ENST00000665799.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665799.1	Assembled from SLRseq reads (SRP049776)
ENST00000654058.1	Assembled from RACEseq reads
ENST00000654058.1	Assembled from SLRseq reads (SRP049776)
ENST00000668444.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668444.1	Assembled from RACEseq reads
ENST00000667478.1	Assembled from RACEseq reads
ENST00000663945.1	Assembled from SLRseq reads (SRP049776)
ENST00000669377.1	Assembled from SLRseq reads (SRP049776)
ENST00000671121.1	Assembled from SLRseq reads (SRP049776)
ENST00000665253.1	Assembled from SLRseq reads (SRP049776)
ENST00000670011.1	Assembled from SLRseq reads (SRP049776)
ENST00000657095.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671517.1	Assembled from SLRseq reads (SRP049776)
ENST00000655695.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655461.1	Assembled from SLRseq reads (SRP049776)
ENST00000665961.1	Assembled from SLRseq reads (SRP049776)
ENST00000670697.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657002.1	Assembled from SLRseq reads (SRP049776)
ENST00000670678.1	Assembled from SLRseq reads (SRP049776)
ENST00000663996.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659236.1	Assembled from RACEseq reads
ENST00000626200.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655954.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656420.1	Assembled from SLRseq reads (SRP049776)
ENST00000424333.6	Assembled from SLRseq reads (SRP049776)
ENST00000653489.1	Assembled from SLRseq reads (SRP049776)
ENST00000663446.1	Assembled from SLRseq reads (SRP049776)
ENST00000670384.1	Assembled from SLRseq reads (SRP049776)
ENST00000665397.1	Assembled from SLRseq reads (SRP049776)
ENST00000669989.1	Assembled from SLRseq reads (SRP049776)
ENST00000661305.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661305.1	Assembled from SLRseq reads (SRP049776)
ENST00000652996.1	Assembled from SLRseq reads (SRP049776)
ENST00000669911.1	Assembled from SLRseq reads (SRP049776)
ENST00000669867.1	Assembled from SLRseq reads (SRP049776)
ENST00000668570.1	Assembled from SLRseq reads (SRP049776)
ENST00000665311.1	Assembled from SLRseq reads (SRP049776)
ENST00000453082.5	non canonical TEC
ENST00000654023.1	Assembled from SLRseq reads (SRP049776)
ENST00000663359.1	Assembled from SLRseq reads (SRP049776)
ENST00000653389.1	Assembled from SLRseq reads (SRP049776)
ENST00000656450.1	Assembled from SLRseq reads (SRP049776)
ENST00000669064.1	Assembled from SLRseq reads (SRP049776)
ENST00000664763.1	Assembled from SLRseq reads (SRP049776)
ENST00000660430.1	Assembled from SLRseq reads (SRP049776)
ENST00000656009.1	Assembled from SLRseq reads (SRP049776)
ENST00000666663.1	Assembled from SLRseq reads (SRP049776)
ENST00000660376.1	Assembled from SLRseq reads (SRP049776)
ENST00000669928.1	Assembled from SLRseq reads (SRP049776)
ENST00000654984.1	Assembled from SLRseq reads (SRP049776)
ENST00000661110.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665411.1	Assembled from SLRseq reads (SRP049776)
ENST00000656474.1	Assembled from SLRseq reads (SRP049776)
ENST00000658502.1	Assembled from SLRseq reads (SRP049776)
ENST00000671079.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663600.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000554726.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657011.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658853.1	Assembled from SLRseq reads (SRP049776)
ENST00000658623.1	Assembled from SLRseq reads (SRP049776)
ENST00000670881.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000636667.1	CAGE supported TSS
ENST00000637886.1	alternative 5' UTR
ENST00000638155.1	alternative 5' UTR
ENST00000438097.6	alternative 5' UTR
ENST00000648336.2	CAGE supported TSS
ENST00000648336.2	LR annotation
ENST00000648336.2	MANE_select
ENST00000630424.2	alternative 5' UTR
ENST00000649550.1	CAGE supported TSS
ENST00000649550.1	LR annotation
ENST00000650110.1	CAGE supported TSS
ENST00000650110.1	LR annotation
ENST00000428984.6	alternative 5' UTR
ENST00000626793.2	NMD likely if extended
ENST00000628733.2	alternative 5' UTR
ENST00000630907.2	alternative 5' UTR
ENST00000629886.2	alternative 5' UTR
ENST00000628267.2	alternative 5' UTR
ENST00000629252.2	alternative 5' UTR
ENST00000628890.1	alternative 5' UTR
ENST00000625681.2	alternative 5' UTR
ENST00000626589.2	alternative 5' UTR
ENST00000676452.1	CAGE supported TSS
ENST00000665366.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659420.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660564.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655390.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000656957.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000356865.11	alternative 5' UTR
ENST00000673763.1	CAGE supported TSS
ENST00000659702.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659855.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669487.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654579.1	Assembled from SLRseq reads (SRP049776)
ENST00000654388.1	Assembled from SLRseq reads (SRP049776)
ENST00000669776.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659028.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665071.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662457.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666764.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665430.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000557523.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665527.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666709.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653113.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668127.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663189.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665897.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663624.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000556159.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663322.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653950.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655889.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000556213.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658161.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662745.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669086.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655230.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000553382.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656772.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658029.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656552.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658140.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000451579.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662421.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670116.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660088.1	Assembled from SLRseq reads (SRP049776)
ENST00000311550.10	MANE_select
ENST00000636466.1	CAGE supported TSS
ENST00000636466.1	alternative 5' UTR
ENST00000400188.7	CAGE supported TSS
ENST00000400188.7	NP_001178250.1
ENST00000545868.4	CAGE supported TSS
ENST00000545868.4	NP_001178249.1
ENST00000545868.4	confirm experimentally
ENST00000621499.1	confirm experimentally
ENST00000355395.9	NP_001158509
ENST00000335625.10	MANE_select
ENST00000555182.5	alternative 5' UTR
ENST00000554038.5	alternative 5' UTR
ENST00000554596.5	alternative 5' UTR
ENST00000555060.1	alternative 5' UTR
ENST00000554599.5	alternative 5' UTR
ENST00000615808.5	MANE_select
ENST00000451330.2	QC splicing correct
ENST00000660679.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000663358.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657653.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000567953.1	confirm experimentally
ENST00000652817.1	Assembled from SLRseq reads (SRP049776)
ENST00000354638.8	MANE_select
ENST00000431101.1	alternative 5' UTR
ENST00000261609.13	LR annotation
ENST00000261609.13	MANE_select
ENST00000649023.1	NMD likely if extended
ENST00000532622.7	upstream ATG
ENST00000669290.1	Assembled from SLRseq reads (SRP049776)
ENST00000561069.5	alternative 5' UTR
ENST00000559709.5	alternative 5' UTR
ENST00000558804.5	alternative 5' UTR
ENST00000560283.5	alternative 5' UTR
ENST00000558206.1	alternative 5' UTR
ENST00000558358.1	alternative 5' UTR
ENST00000332303.6	MANE_select
ENST00000668076.1	Assembled from SLRseq reads (SRP049776)
ENST00000400011.6	QC splicing correct
ENST00000614355.5	CAGE supported TSS
ENST00000614355.5	MANE_select
ENST00000545208.6	PMID:7682777
ENST00000421447.1	QC splicing correct
ENST00000648232.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000299847.7	MANE_select
ENST00000562729.5	alternative 5' UTR
ENST00000327271.10	QC splicing correct
ENST00000566740.1	QC splicing correct
ENST00000567449.5	CAGE supported TSS
ENST00000658773.1	alternative 5' UTR
ENST00000657391.1	alternative 5' UTR
ENST00000656435.1	alternative 5' UTR
ENST00000670849.1	alternative 5' UTR
ENST00000561607.6	alternative 5' UTR
ENST00000565466.5	alternative 5' UTR
ENST00000664837.1	upstream ATG
ENST00000362065.9	LR annotation
ENST00000362065.9	MANE_select
ENST00000666143.1	upstream ATG
ENST00000562892.2	alternative 5' UTR
ENST00000435680.6	MANE_select
ENST00000665655.1	Assembled from SLRseq reads (SRP049776)
ENST00000561299.1	QC splicing correct
ENST00000256552.11	MANE_select
ENST00000559177.5	QC splicing correct
ENST00000558445.5	alternative 5' UTR
ENST00000654993.1	Assembled from SLRseq reads (SRP049776)
ENST00000559292.2	QC splicing correct
ENST00000557928.1	QC splicing correct
ENST00000307145.4	MANE_select
ENST00000307050.6	CAGE supported TSS
ENST00000307050.6	MANE_select
ENST00000560598.2	alternative 5' UTR
ENST00000635978.1	alternative 5' UTR
ENST00000636603.1	alternative 5' UTR
ENST00000638031.1	NAGNAG splice site
ENST00000637350.1	NAGNAG splice site
ENST00000306901.9	MANE_select
ENST00000512626.2	not best-in-genome evidence
ENST00000509311.7	MANE_select
ENST00000509311.7	QC splicing correct
ENST00000509311.7	not best-in-genome evidence
ENST00000561563.6	QC splicing correct
ENST00000604846.1	not organism-supported
ENST00000656039.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000361627.8	MANE_select
ENST00000543522.5	alternative 5' UTR
ENST00000647892.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000560677.5	non canonical TEC
ENST00000651154.1	CAGE supported TSS
ENST00000651154.1	LR annotation
ENST00000651154.1	MANE_select
ENST00000652365.1	alternative 5' UTR
ENST00000652365.1	upstream ATG
ENST00000616417.5	CAGE supported TSS
ENST00000616417.5	MANE_select
ENST00000672206.1	CAGE supported TSS
ENST00000653439.1	Assembled from SLRseq reads (SRP049776)
ENST00000666561.1	Assembled from SLRseq reads (SRP049776)
ENST00000634891.2	MANE_select
ENST00000389232.9	NAGNAG splice site
ENST00000634418.1	NAGNAG splice site
ENST00000560404.2	QC splicing correct
ENST00000306730.8	MANE_select
ENST00000560649.1	QC splicing correct
ENST00000383263.7	MANE_select
ENST00000560035.1	alternative 5' UTR
ENST00000670947.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000256545.9	MANE_select
ENST00000532113.1	QC splicing correct
ENST00000397766.4	MANE_select
ENST00000256544.8	MANE_select
ENST00000557877.5	alternative 5' UTR
ENST00000560108.5	alternative 5' UTR
ENST00000559515.1	alternative 5' UTR
ENST00000559464.1	alternative 5' UTR
ENST00000267750.9	MANE_select
ENST00000354181.8	MANE_select
ENST00000290209.9	CAGE supported TSS
ENST00000560611.5	alternative 5' UTR
ENST00000397702.6	alternative 5' UTR
ENST00000558667.5	alternative 5' UTR
ENST00000675289.1	align_id:3593848|asmbl_84013
ENST00000561120.5	alternative 5' UTR
ENST00000559236.5	alternative 5' UTR
ENST00000559484.1	alternative 5' UTR
ENST00000328848.6	MANE_select
ENST00000537011.6	MANE_select
ENST00000537011.6	downstream ATG
ENST00000314891.11	MANE_select
ENST00000565706.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654640.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000290374.5	MANE_select
ENST00000503496.6	Assembled from SLRseq reads (SRP049776)
ENST00000671663.1	Assembled from SLRseq reads (SRP049776)
ENST00000558707.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661009.1	Assembled from SLRseq reads (SRP049776)
ENST00000290378.6	LR annotation
ENST00000290378.6	MANE_select
ENST00000156471.10	MANE_select
ENST00000356321.4	MANE_select
ENST00000559564.1	alternative 5' UTR
ENST00000623582.1	confirm experimentally
ENST00000657448.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000528386.4	MANE_select
ENST00000559246.1	QC splicing correct
ENST00000256538.9	MANE_select
ENST00000501169.3	Assembled from SLRseq reads (SRP049776)
ENST00000661846.1	Assembled from SLRseq reads (SRP049776)
ENST00000668741.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000560886.5	QC splicing correct
ENST00000650498.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000666078.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000566621.6	CAGE supported TSS
ENST00000566621.6	LR annotation
ENST00000566621.6	MANE_select
ENST00000569302.6	QC splicing correct
ENST00000437989.6	alternative 3' UTR
ENST00000562489.1	CAGE supported TSS
ENST00000561208.6	MANE_select
ENST00000397624.7	alternative 5' UTR
ENST00000558313.5	alternative 5' UTR
ENST00000663330.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000561054.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669775.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669587.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000560841.5	alternative 5' UTR
ENST00000558625.5	alternative 5' UTR
ENST00000558148.5	alternative 5' UTR
ENST00000669882.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658097.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000558081.3	Assembled from RACEseq reads
ENST00000559232.2	Assembled from SLRseq reads (SRP049776)
ENST00000657585.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000560819.1	confirm experimentally
ENST00000560198.1	confirm experimentally
ENST00000561161.2	Assembled from SLRseq reads (SRP049776)
ENST00000671149.1	Assembled from SLRseq reads (SRP049776)
ENST00000656912.1	Assembled from SLRseq reads (SRP049776)
ENST00000299084.9	MANE_select
ENST00000397609.6	MANE_select
ENST00000397609.6	NP_775882.2
ENST00000310803.10	MANE_select
ENST00000661802.1	Assembled from SLRseq reads (SRP049776)
ENST00000645416.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000561058.5	QC splicing correct
ENST00000664681.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657583.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663018.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000560259.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000560259.2	QC splicing correct
ENST00000656318.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671351.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652983.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652983.1	QC splicing correct
ENST00000656792.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656792.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000670734.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666547.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654986.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655013.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669046.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671164.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000560552.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655192.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668881.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654243.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661412.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656259.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660439.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653670.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000560815.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661798.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000558818.3	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000559570.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000397591.2	alternative 5' UTR
ENST00000260356.6	MANE_select
ENST00000559746.1	QC splicing correct
ENST00000350221.4	MANE_select
ENST00000559547.1	QC splicing correct
ENST00000559547.1	alternative 3' UTR
ENST00000561100.2	MANE_select
ENST00000299092.3	QC splicing correct
ENST00000263791.10	MANE_select
ENST00000624709.1	confirm experimentally
ENST00000267884.11	MANE_select
ENST00000559012.2	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000655221.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667323.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000504245.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000504245.6	Assembled from SLRseq reads (SRP049776)
ENST00000661955.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660446.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668306.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000354670.9	MANE_select
ENST00000397573.5	alternative 5' UTR
ENST00000561360.5	alternative 5' UTR
ENST00000561360.5	non canonical U12
ENST00000561282.5	alternative 5' UTR
ENST00000557870.1	alternative 5' UTR
ENST00000560430.1	alternative 5' UTR
ENST00000559022.1	QC splicing correct
ENST00000559414.5	NMD likely if extended
ENST00000412359.7	non canonical TEC
ENST00000287598.11	MANE_select
ENST00000561230.5	alternative 5' UTR
ENST00000558055.5	alternative 5' UTR
ENST00000560346.5	alternative 5' UTR
ENST00000558878.6	upstream ATG
ENST00000558183.6	upstream ATG
ENST00000560806.6	upstream ATG
ENST00000558106.5	alternative 5' UTR
ENST00000559617.5	alternative 5' UTR
ENST00000560684.6	upstream ATG
ENST00000559139.5	alternative 5' UTR
ENST00000560669.5	alternative 5' UTR
ENST00000542403.3	alternative 3' UTR
ENST00000623360.1	NP_001034994
ENST00000260402.8	MANE_select
ENST00000559520.1	non canonical TEC
ENST00000638170.2	MANE_select
ENST00000638170.2	upstream uORF
ENST00000397536.6	FLJ44047
ENST00000559313.5	FLJ43339
ENST00000559313.5	NP_997263
ENST00000557973.1	NMD likely if extended
ENST00000448599.2	MANE_select
ENST00000448599.2	NP_001139115.1
ENST00000448599.2	QC splicing correct
ENST00000267889.5	MANE_select
ENST00000608100.5	CAGE supported TSS
ENST00000610693.5	QC splicing correct
ENST00000610693.5	upstream ATG
ENST00000479013.7	upstream ATG
ENST00000487418.8	MANE_select
ENST00000487418.8	upstream ATG
ENST00000473112.6	QC splicing correct
ENST00000559575.5	QC splicing correct
ENST00000416165.6	MANE_select
ENST00000306243.7	MANE_select
ENST00000559991.1	QC splicing correct
ENST00000559911.5	QC splicing correct
ENST00000416810.7	MANE_select
ENST00000560109.1	QC splicing correct
ENST00000315616.12	MANE_select
ENST00000614337.4	NMD likely if extended
ENST00000399668.7	MANE_select
ENST00000526635.2	Assembled from SLRseq reads (SRP049776)
ENST00000650326.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000671605.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000527860.5	alternative 5' UTR
ENST00000423169.6	NP_001157742.1
ENST00000557850.5	non canonical TEC
ENST00000382643.7	NP_001157741.1
ENST00000267868.8	CAGE supported TSS
ENST00000267868.8	LR annotation
ENST00000267868.8	MANE_select
ENST00000645673.2	CAGE supported TSS
ENST00000645673.2	LR annotation
ENST00000645673.2	alternative 5' UTR
ENST00000526763.6	alternative 5' UTR
ENST00000532743.6	alternative 5' UTR
ENST00000532743.6	non canonical polymorphism
ENST00000338376.8	MANE_select
ENST00000558777.5	QC splicing correct
ENST00000558777.5	non canonical TEC
ENST00000558560.1	NMD likely if extended
ENST00000558560.1	QC splicing correct
ENST00000560460.5	QC splicing correct
ENST00000260447.6	MANE_select
ENST00000220496.9	MANE_select
ENST00000559238.5	QC splicing correct
ENST00000344320.8	MANE_select
ENST00000570108.5	QC splicing correct
ENST00000355341.8	MANE_select
ENST00000566407.5	non canonical TEC
ENST00000299174.10	MANE_select
ENST00000220507.5	MANE_select
ENST00000220509.10	MANE_select
ENST00000668282.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000249749.7	CAGE supported TSS
ENST00000249749.7	LR annotation
ENST00000249749.7	MANE_select
ENST00000444189.7	upstream ATG
ENST00000617768.5	MANE_select
ENST00000617768.5	upstream ATG
ENST00000648947.1	CAGE supported TSS
ENST00000648947.1	LR annotation
ENST00000648947.1	MANE_select
ENST00000559995.2	QC splicing correct
ENST00000557849.1	QC splicing correct
ENST00000458580.7	MANE_select
ENST00000558351.5	QC splicing correct
ENST00000334660.10	MANE_select
ENST00000558945.5	QC splicing correct
ENST00000560706.5	QC splicing correct
ENST00000649527.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000220514.8	MANE_select
ENST00000558123.5	QC splicing correct
ENST00000260359.10	NAGNAG splice site
ENST00000559596.6	MANE_select
ENST00000558582.5	QC splicing correct
ENST00000559959.1	QC splicing correct
ENST00000260361.9	MANE_select
ENST00000462276.1	NMD likely if extended
ENST00000260386.7	MANE_select
ENST00000263800.11	MANE_select
ENST00000304330.9	MANE_select
ENST00000561603.5	QC splicing correct
ENST00000559066.5	QC splicing correct
ENST00000263798.8	MANE_select
ENST00000568343.1	QC splicing correct
ENST00000670986.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657259.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663093.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655305.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654879.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663077.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670586.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658734.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664448.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000565259.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000566718.5	alternative 5' UTR
ENST00000457542.7	MANE_select
ENST00000510535.1	alternative 5' UTR
ENST00000397299.9	MANE_select
ENST00000382448.8	NP_005081.1
ENST00000458483.4	MANE_select
ENST00000569354.1	QC splicing correct
ENST00000320955.8	MANE_select
ENST00000662841.1	Assembled from SLRseq reads (SRP049776)
ENST00000653607.1	Assembled from SLRseq reads (SRP049776)
ENST00000564432.3	NAGNAG splice site
ENST00000564432.3	non canonical TEC
ENST00000657738.1	Assembled from SLRseq reads (SRP049776)
ENST00000663161.1	Assembled from SLRseq reads (SRP049776)
ENST00000659518.1	Assembled from SLRseq reads (SRP049776)
ENST00000654230.1	Assembled from SLRseq reads (SRP049776)
ENST00000669721.1	Assembled from SLRseq reads (SRP049776)
ENST00000655958.1	Assembled from SLRseq reads (SRP049776)
ENST00000220325.9	MANE_select
ENST00000564168.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000399518.3	not organism-supported
ENST00000290472.4	MANE_select
ENST00000560132.1	QC splicing correct
ENST00000397272.7	MANE_select
ENST00000318006.10	MANE_select
ENST00000568029.5	QC splicing correct
ENST00000563846.5	QC splicing correct
ENST00000389834.9	MANE_select
ENST00000389834.9	non canonical U12
ENST00000566014.1	non canonical U12
ENST00000562946.5	non canonical U12
ENST00000561871.1	alternative 5' UTR
ENST00000562170.5	alternative 5' UTR
ENST00000562859.5	alternative 5' UTR
ENST00000397163.8	MANE_select
ENST00000357568.8	NP_077320.1
ENST00000397200.8	CAGE supported TSS
ENST00000397200.8	NP_775111.1
ENST00000674093.1	CAGE supported TSS
ENST00000674093.1	NP_775112.1
ENST00000674093.1	alternative 5' UTR
ENST00000569136.6	CAGE supported TSS
ENST00000569136.6	alternative 5' UTR
ENST00000673936.1	CAGE supported TSS
ENST00000673936.1	alternative 5' UTR
ENST00000673890.1	CAGE supported TSS
ENST00000673890.1	alternative 5' UTR
ENST00000674149.1	CAGE supported TSS
ENST00000674149.1	alternative 5' UTR
ENST00000674149.1	non canonical U12
ENST00000673771.1	CAGE supported TSS
ENST00000673771.1	NP_775112.1
ENST00000673771.1	alternative 5' UTR
ENST00000337571.9	CAGE supported TSS
ENST00000337571.9	alternative 5' UTR
ENST00000673743.1	CAGE supported TSS
ENST00000673743.1	non canonical U12
ENST00000673939.1	CAGE supported TSS
ENST00000673939.1	alternative 3' UTR
ENST00000674146.1	CAGE supported TSS
ENST00000674146.1	alternative 5' UTR
ENST00000674146.1	non canonical U12
ENST00000674119.1	CAGE supported TSS
ENST00000674119.1	alternative 5' UTR
ENST00000673692.1	CAGE supported TSS
ENST00000673692.1	NP_775112.1
ENST00000673692.1	alternative 5' UTR
ENST00000674052.1	CAGE supported TSS
ENST00000561817.5	CAGE supported TSS
ENST00000674018.1	CAGE supported TSS
ENST00000674018.1	alternative 5' UTR
ENST00000397204.9	CAGE supported TSS
ENST00000397204.9	NP_775113.1
ENST00000397204.9	alternative 5' UTR
ENST00000673886.1	CAGE supported TSS
ENST00000673886.1	alternative 5' UTR
ENST00000673886.1	non canonical U12
ENST00000674139.1	CAGE supported TSS
ENST00000674139.1	alternative 5' UTR
ENST00000673851.1	CAGE supported TSS
ENST00000673851.1	alternative 5' UTR
ENST00000673839.1	CAGE supported TSS
ENST00000673839.1	alternative 5' UTR
ENST00000673978.1	CAGE supported TSS
ENST00000673987.1	CAGE supported TSS
ENST00000673928.1	CAGE supported TSS
ENST00000673928.1	alternative 5' UTR
ENST00000673928.1	non canonical U12
ENST00000674041.1	CAGE supported TSS
ENST00000565559.5	CAGE supported TSS
ENST00000673750.1	CAGE supported TSS
ENST00000673750.1	alternative 5' UTR
ENST00000674011.1	CAGE supported TSS
ENST00000674011.1	alternative 3' UTR
ENST00000674135.1	CAGE supported TSS
ENST00000674135.1	alternative 5' UTR
ENST00000674140.1	non canonical U12
ENST00000568153.2	alternative 3' UTR
ENST00000567817.6	alternative 3' UTR
ENST00000564754.7	MANE_select
ENST00000564754.7	QC splicing correct
ENST00000567041.1	QC splicing correct
ENST00000561526.5	alternative 5' UTR
ENST00000568227.5	NMD likely if extended
ENST00000249647.8	MANE_select
ENST00000568859.5	alternative 5' UTR
ENST00000649053.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000564805.1	QC splicing correct
ENST00000650210.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000397130.8	MANE_select
ENST00000397130.8	alternative 5' UTR
ENST00000563454.5	alternative 5' UTR
ENST00000570160.1	alternative 5' UTR
ENST00000260372.8	MANE_select
ENST00000561902.1	QC splicing correct
ENST00000290607.12	MANE_select
ENST00000290607.12	QC splicing correct
ENST00000569419.1	QC splicing correct
ENST00000356231.4	CAGE supported TSS
ENST00000356231.4	LR annotation
ENST00000356231.4	MANE_select
ENST00000267890.11	MANE_select
ENST00000562880.5	alternative 5' UTR
ENST00000664583.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000290650.9	MANE_select
ENST00000260403.7	MANE_select
ENST00000300213.9	MANE_select
ENST00000441366.7	MANE_select
ENST00000648595.1	CAGE supported TSS
ENST00000648595.1	LR annotation
ENST00000220420.10	MANE_select
ENST00000452443.3	MANE_select
ENST00000305641.7	MANE_select
ENST00000562188.7	MANE_select
ENST00000561661.1	alternative 5' UTR
ENST00000564079.6	MANE_select
ENST00000564079.6	NAGNAG splice site
ENST00000563147.5	QC splicing correct
ENST00000565548.1	not organism-supported
ENST00000382044.9	MANE_select
ENST00000476454.5	FLJ41424
ENST00000450115.6	NP_001135451.1
ENST00000413546.1	not organism-supported
ENST00000300231.6	MANE_select
ENST00000396923.7	DKFZp313L0221
ENST00000360135.8	KIAA0377
ENST00000334933.8	DKFZp686I0669
ENST00000381879.8	QC splicing correct
ENST00000439195.5	QC splicing correct
ENST00000432870.7	QC splicing correct
ENST00000488768.5	novel transcript
ENST00000429176.5	QC splicing correct
ENST00000429176.5	alternative 5' UTR
ENST00000437534.3	FLJ37003
ENST00000441322.6	MANE_select
ENST00000450892.7	LR annotation
ENST00000450892.7	MANE_select
ENST00000471703.5	FLJ42591
ENST00000448437.6	FLJ33438
ENST00000485556.5	FLJ44767
ENST00000428650.5	QC splicing correct
ENST00000432436.1	FLJ16411
ENST00000396879.8	CAGE supported TSS
ENST00000396879.8	LR annotation
ENST00000396879.8	MANE_select
ENST00000381761.6	LR annotation
ENST00000321596.6	FLJ16016
ENST00000469461.6	DKFZp686K0327
ENST00000409481.1	NAGNAG splice site
ENST00000409481.1	QC splicing correct
ENST00000409481.1	alternative 5' UTR
ENST00000409481.1	upstream uORF
ENST00000413453.7	MANE_select
ENST00000413453.7	alternative 5' UTR
ENST00000429276.1	possible poly-T primed artefact
ENST00000300289.10	MANE_select
ENST00000319359.8	FLJ22637
ENST00000319359.8	MANE_select
ENST00000433927.1	alternative 5' UTR
ENST00000249786.9	MANE_select
ENST00000249786.9	alternative 5' UTR
ENST00000402131.5	alternative 5' UTR
ENST00000409614.1	alternative 5' UTR
ENST00000448553.5	QC splicing correct
ENST00000448553.5	novel transcript FLJ40363
ENST00000457418.5	QC splicing correct
ENST00000457418.5	novel transcript DKFZp686A1799
ENST00000299969.10	GENCODE experimental pipeline
ENST00000299969.10	QC splicing correct
ENST00000319327.6	not organism-supported
ENST00000476490.1	novel transcript
ENST00000406925.6	alternative 5' UTR
ENST00000442995.4	MANE_select
ENST00000458412.2	FLJ12373
ENST00000267812.4	MANE_select
ENST00000381246.6	novel transcript
ENST00000263795.11	FLJ12973
ENST00000263795.11	MANE_select
ENST00000417257.6	MANE_select
ENST00000484674.5	novel transcript FLJ41022
ENST00000558108.6	QC splicing correct
ENST00000451277.5	QC splicing correct
ENST00000636859.1	CAGE supported TSS
ENST00000479319.1	novel transcript
ENST00000299957.11	MANE_select
ENST00000299957.11	NP_612432
ENST00000650436.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000561305.1	alternative 3' UTR
ENST00000559034.1	QC splicing correct
ENST00000558791.5	alternative 5' UTR
ENST00000260327.9	MANE_select
ENST00000558966.5	alternative 5' UTR
ENST00000559793.5	alternative 5' UTR
ENST00000558968.1	alternative 5' UTR
ENST00000560049.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657789.1	Assembled from SLRseq reads (SRP049776)
ENST00000653319.1	Assembled from SLRseq reads (SRP049776)
ENST00000261868.10	MANE_select
ENST00000261866.12	MANE_select
ENST00000535302.6	NP_001153699
ENST00000559347.1	QC splicing correct
ENST00000434130.6	NP_001138584
ENST00000559916.1	alternative 3' UTR
ENST00000648006.3	CAGE supported TSS
ENST00000648006.3	LR annotation
ENST00000648006.3	MANE_select
ENST00000559220.1	QC splicing correct
ENST00000329464.9	MANE_select
ENST00000329464.9	genebuild_only_MANE
ENST00000338264.8	NAGNAG splice site
ENST00000558419.1	QC splicing correct
ENST00000340827.4	MANE_select
ENST00000557864.1	alternative 3' UTR
ENST00000674211.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000674405.1	Assembled from SLRseq reads (SRP049776)
ENST00000267814.14	MANE_select
ENST00000674368.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674368.1	Assembled from SLRseq reads (SRP049776)
ENST00000674387.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674387.1	alternative 3' UTR
ENST00000558574.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000558574.2	Assembled from RACEseq reads
ENST00000558574.2	Assembled from SLRseq reads (SRP049776)
ENST00000674487.1	Assembled from SLRseq reads (SRP049776)
ENST00000560967.1	QC splicing correct
ENST00000389039.11	MANE_select
ENST00000323030.6	MANE_select
ENST00000323030.6	ortholog of mouse Numb-interacting protein 2 (9030623N16Rik)
ENST00000267803.8	Non Canonical Donor splice site between exons one and two of this variant AC091117.4-001
ENST00000267803.8	ortholog of mouse Numb-interacting protein 1 (BC019755)
ENST00000559014.5	alternative 5' UTR
ENST00000558996.5	alternative 5' UTR
ENST00000558326.5	alternative 5' UTR
ENST00000559988.5	alternative 5' UTR
ENST00000559226.5	alternative 5' UTR
ENST00000558377.5	alternative 5' UTR
ENST00000559644.5	alternative 5' UTR
ENST00000558851.1	Non Canonical Donor splice site between exons one and two of this variant AC091117.4-015
ENST00000558851.1	alternative 5' UTR
ENST00000321429.8	alternative 5' UTR
ENST00000389037.7	MANE_select
ENST00000558322.5	alternative 5' UTR
ENST00000561220.6	QC splicing correct
ENST00000559716.6	QC splicing correct
ENST00000558039.1	CAGE supported TSS
ENST00000290894.12	NP_612365
ENST00000663463.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000560344.6	Assembled from SLRseq reads (SRP049776)
ENST00000347644.8	MANE_select
ENST00000649758.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000396659.8	MANE_select
ENST00000561148.5	alternative 5' UTR
ENST00000559885.1	alternative 5' UTR
ENST00000305560.11	MANE_select
ENST00000558435.5	NMD likely if extended
ENST00000396650.7	MANE_select
ENST00000396650.7	alternative 5' UTR
ENST00000261867.5	MANE_select
ENST00000220531.9	CAGE supported TSS
ENST00000220531.9	LR annotation
ENST00000220531.9	MANE_select
ENST00000565323.6	CAGE supported TSS
ENST00000565323.6	LR annotation
ENST00000260324.12	MANE_select
ENST00000655516.1	Assembled from SLRseq reads (SRP049776)
ENST00000669454.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647643.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000661853.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000559184.5	alternative 5' UTR
ENST00000560636.5	alternative 5' UTR
ENST00000561133.5	alternative 5' UTR
ENST00000558816.5	NP_705872
ENST00000536845.7	MANE_select
ENST00000316364.9	alternative 5' UTR
ENST00000358066.8	alternative 5' UTR
ENST00000559196.1	alternative 5' UTR
ENST00000669849.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671085.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000558792.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657527.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669298.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669602.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653152.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654238.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651940.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000656461.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652887.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000561238.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668869.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658874.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664705.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662551.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665188.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657831.1	Assembled from SLRseq reads (SRP049776)
ENST00000341459.8	MANE_select
ENST00000324324.12	MANE_select
ENST00000560172.5	alternative 3' UTR
ENST00000644354.1	alternative 5' UTR
ENST00000645050.1	alternative 5' UTR
ENST00000417307.3	MANE_select
ENST00000417307.3	QC splicing correct
ENST00000647363.1	alternative 5' UTR
ENST00000647232.1	alternative 5' UTR
ENST00000647546.1	LR annotation
ENST00000647546.1	alternative 5' UTR
ENST00000396577.7	LR annotation
ENST00000380993.8	MANE_select
ENST00000560339.2	Assembled from SLRseq reads (SRP049776)
ENST00000561094.2	Assembled from SLRseq reads (SRP049776)
ENST00000558813.5	NP_001020420
ENST00000331200.8	MANE_select
ENST00000316623.10	CAGE supported TSS
ENST00000316623.10	MANE_select
ENST00000653789.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000380950.7	MANE_select
ENST00000380950.7	NP_001181927
ENST00000558591.1	alternative 5' UTR
ENST00000332408.9	MANE_select
ENST00000558220.1	alternative 5' UTR
ENST00000530028.3	MANE_select
ENST00000559471.6	MANE_select
ENST00000557910.1	QC splicing correct
ENST00000388901.10	MANE_select
ENST00000327171.7	NP_001001556.1
ENST00000560654.5	alternative 5' UTR
ENST00000559040.1	QC splicing correct
ENST00000560031.6	MANE_select
ENST00000558145.5	alternative 5' UTR
ENST00000544523.5	alternative 5' UTR
ENST00000559454.5	alternative 5' UTR
ENST00000558399.5	QC splicing correct
ENST00000299338.11	MANE_select
ENST00000299338.11	non canonical U12
ENST00000559905.5	alternative 5' UTR
ENST00000267843.9	MANE_select
ENST00000403028.8	MANE_select
ENST00000403028.8	alternative 5' UTR
ENST00000558653.5	alternative 5' UTR
ENST00000560632.5	NAGNAG splice site
ENST00000559405.5	alternative 5' UTR
ENST00000284509.11	CAGE supported TSS
ENST00000284509.11	MANE_select
ENST00000284509.11	alternative 5' UTR
ENST00000558829.1	alternative 5' UTR
ENST00000666846.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000267842.10	MANE_select
ENST00000380902.8	NP_001153101
ENST00000267845.8	MANE_select
ENST00000380877.8	CAGE supported TSS
ENST00000380877.8	MANE_select
ENST00000220429.12	CAGE supported TSS
ENST00000543881.5	CAGE supported TSS
ENST00000429662.6	CAGE supported TSS
ENST00000396464.7	CAGE supported TSS
ENST00000560825.5	CAGE supported TSS
ENST00000558335.5	alternative 5' UTR
ENST00000558970.2	CAGE supported TSS
ENST00000558970.2	alternative 5' UTR
ENST00000615671.2	CAGE supported TSS
ENST00000619314.1	confirm experimentally
ENST00000670332.1	Assembled from SLRseq reads (SRP049776)
ENST00000659570.1	Assembled from SLRseq reads (SRP049776)
ENST00000668321.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667317.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648591.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000558593.1	QC splicing correct
ENST00000560297.5	alternative 5' UTR
ENST00000307179.9	MANE_select
ENST00000307179.9	alternative 5' UTR
ENST00000560982.5	alternative 5' UTR
ENST00000558091.5	alternative 5' UTR
ENST00000532404.6	MANE_select
ENST00000532404.6	NP_987090
ENST00000646667.1	CAGE supported TSS
ENST00000646667.1	LR annotation
ENST00000646667.1	MANE_select
ENST00000560955.5	NAGNAG splice site
ENST00000560849.2	NAGNAG splice site
ENST00000560849.2	QC splicing correct
ENST00000558237.1	QC splicing correct
ENST00000261854.10	MANE_select
ENST00000559527.1	QC splicing correct
ENST00000558317.1	QC splicing correct
ENST00000617693.4	non canonical TEC
ENST00000613161.4	non canonical TEC
ENST00000655436.1	Assembled from SLRseq reads (SRP049776)
ENST00000656830.1	Assembled from SLRseq reads (SRP049776)
ENST00000561393.5	non canonical U12
ENST00000558439.5	non canonical U12
ENST00000261842.10	MANE_select
ENST00000261842.10	non canonical U12
ENST00000560508.1	non canonical U12
ENST00000637513.2	MANE_select
ENST00000649177.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000396402.6	MANE_select
ENST00000396404.8	alternative 5' UTR
ENST00000559878.5	alternative 5' UTR
ENST00000558328.5	alternative 5' UTR
ENST00000453807.6	alternative 5' UTR
ENST00000557858.5	alternative 5' UTR
ENST00000559980.5	alternative 5' UTR
ENST00000405011.6	alternative 5' UTR
ENST00000559646.1	alternative 5' UTR
ENST00000559672.2	QC splicing correct
ENST00000335449.11	MANE_select
ENST00000558426.5	upstream uORF
ENST00000251076.9	NAGNAG splice site
ENST00000543779.6	NP_001167587
ENST00000560891.6	CAGE supported TSS
ENST00000560891.6	MANE_select
ENST00000449909.7	NP_001167588
ENST00000559059.1	NMD likely if extended
ENST00000661767.1	Assembled from SLRseq reads (SRP049776)
ENST00000560727.5	QC splicing correct
ENST00000542355.6	NP_001158729
ENST00000220478.8	MANE_select
ENST00000558709.1	alternative 5' UTR
ENST00000267838.7	MANE_select
ENST00000560491.2	alternative 5' UTR
ENST00000249700.9	MANE_select
ENST00000560576.1	QC splicing correct
ENST00000435126.6	NP_001136357.1
ENST00000558455.1	alternative 5' UTR
ENST00000308580.12	MANE_select
ENST00000299601.10	MANE_select
ENST00000261845.7	MANE_select
ENST00000561207.1	QC splicing correct
ENST00000558607.1	QC splicing correct
ENST00000260442.3	MANE_select
ENST00000260442.3	NP_065129
ENST00000261837.12	MANE_select
ENST00000560085.1	QC splicing correct
ENST00000559825.1	QC splicing correct
ENST00000559779.2	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000559779.2	Assembled from SLRseq reads (SRP049776)
ENST00000654724.1	Assembled from SLRseq reads (SRP049776)
ENST00000261839.12	MANE_select
ENST00000399233.7	CAGE supported TSS
ENST00000399233.7	MANE_select
ENST00000249822.9	MANE_select
ENST00000653440.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000305901.7	MANE_select
ENST00000654059.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660503.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660503.1	Assembled from SLRseq reads (SRP049776)
ENST00000656588.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671573.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662193.1	Assembled from RACEseq reads
ENST00000360509.10	MANE_select
ENST00000360509.10	alternative 5' UTR
ENST00000557913.5	QC splicing correct
ENST00000557913.5	alternative 5' UTR
ENST00000560036.1	alternative 5' UTR
ENST00000560036.1	overlapping uORF
ENST00000657340.1	Assembled from SLRseq reads (SRP049776)
ENST00000661948.1	Assembled from SLRseq reads (SRP049776)
ENST00000557976.6	Assembled from SLRseq reads (SRP049776)
ENST00000658185.1	Assembled from SLRseq reads (SRP049776)
ENST00000647821.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000260323.15	NP_001074003.1
ENST00000260323.15	confirm experimentally
ENST00000653058.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000260443.9	MANE_select
ENST00000677172.1	upstream uORF
ENST00000677092.1	align_id:3596644|asmbl_86809
ENST00000336787.6	MANE_select
ENST00000336787.6	genebuild_only_MANE
ENST00000436697.3	MANE_select
ENST00000567948.1	alternative 5' UTR
ENST00000164305.10	MANE_select
ENST00000164305.10	non canonical U12
ENST00000566999.5	non canonical U12
ENST00000566072.1	NMD likely if extended
ENST00000566072.1	non canonical conserved
ENST00000442196.8	MANE_select
ENST00000569691.2	MANE_select
ENST00000321149.7	MANE_select
ENST00000321149.7	QC splicing correct
ENST00000563719.4	MANE_select
ENST00000645724.1	alternative 3' UTR
ENST00000647935.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000389286.9	MANE_select
ENST00000435532.8	MANE_select
ENST00000648451.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000559847.7	alternative 5' UTR
ENST00000559847.7	non canonical U12
ENST00000559447.7	non canonical U12
ENST00000673997.1	Supported by SRA:SRR1163657.325956.1
ENST00000673997.1	Supported by gnl|SRA|DRR138518.479905
ENST00000673997.1	non canonical U12
ENST00000674082.1	CAGE supported TSS
ENST00000674082.1	non canonical U12
ENST00000674082.1	upstream ATG
ENST00000673948.1	non canonical U12
ENST00000560792.4	alternative 5' UTR
ENST00000560792.4	non canonical U12
ENST00000560827.5	alternative 5' UTR
ENST00000260453.4	MANE_select
ENST00000657839.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000267807.12	MANE_select
ENST00000559237.5	upstream ATG
ENST00000559352.1	alternative 5' UTR
ENST00000648603.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000333725.10	MANE_select
ENST00000564843.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662220.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000281282.6	MANE_select
ENST00000267853.10	MANE_select
ENST00000494490.2	NMD exception
ENST00000482852.5	Gdown2 variants  for GRINL1A downstream transcripts 2
ENST00000567643.1	NMD likely if extended
ENST00000299638.8	MANE_select
ENST00000464308.1	Gdown5 variants  for GRINL1A downstream transcripts 5
ENST00000249750.9	MANE_select
ENST00000561070.5	alternative 5' UTR
ENST00000558239.5	alternative 5' UTR
ENST00000558239.5	upstream uORF
ENST00000557967.5	alternative 5' UTR
ENST00000219919.9	MANE_select
ENST00000356113.10	alternative 5' UTR
ENST00000299022.10	MANE_select
ENST00000260408.8	MANE_select
ENST00000402627.5	QC splicing correct
ENST00000396136.6	QC splicing correct
ENST00000470269.5	Chimaeric cDNA EM:Z48614.1 bases 1-351 found on chrX
ENST00000671030.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000559228.6	MANE_select
ENST00000450403.3	NAGNAG splice site
ENST00000559757.1	alternative 5' UTR
ENST00000348370.9	MANE_select
ENST00000380516.7	MANE_select
ENST00000560494.1	alternative 3' UTR
ENST00000288207.7	MANE_select
ENST00000288235.9	MANE_select
ENST00000307144.6	MANE_select
ENST00000558348.5	alternative 5' UTR
ENST00000560394.5	alternative 5' UTR
ENST00000288228.10	MANE_select
ENST00000559628.5	alternative 5' UTR
ENST00000557914.5	alternative 5' UTR
ENST00000560474.5	alternative 5' UTR
ENST00000560074.5	alternative 5' UTR
ENST00000560123.5	alternative 5' UTR
ENST00000561361.1	alternative 5' UTR
ENST00000559189.5	alternative 5' UTR
ENST00000396065.3	MANE_select
ENST00000560585.5	alternative 5' UTR
ENST00000559626.1	alternative 5' UTR
ENST00000559200.1	alternative 5' UTR
ENST00000396060.7	MANE_select
ENST00000607373.6	CAGE supported TSS
ENST00000607373.6	MANE_select
ENST00000267859.8	upstream ATG
ENST00000415213.7	upstream ATG
ENST00000668662.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000396057.6	MANE_select
ENST00000396057.6	upstream uORF
ENST00000662300.1	Assembled from SLRseq reads (SRP049776)
ENST00000677968.1	alternative 5' UTR
ENST00000678450.1	alternative 5' UTR
ENST00000557906.6	alternative 5' UTR
ENST00000558558.6	alternative 5' UTR
ENST00000559956.6	alternative 5' UTR
ENST00000560468.6	alternative 5' UTR
ENST00000678870.1	alternative 5' UTR
ENST00000678061.1	alternative 5' UTR
ENST00000558169.6	alternative 5' UTR
ENST00000679109.1	alternative 5' UTR
ENST00000559818.6	alternative 5' UTR
ENST00000451270.7	MANE_select
ENST00000451270.7	alternative 5' UTR
ENST00000560014.5	alternative 5' UTR
ENST00000421017.6	alternative 5' UTR
ENST00000560466.5	alternative 5' UTR
ENST00000560367.6	alternative 5' UTR
ENST00000558998.5	alternative 5' UTR
ENST00000560389.5	alternative 5' UTR
ENST00000560165.5	alternative 5' UTR
ENST00000559725.5	alternative 5' UTR
ENST00000559350.5	alternative 5' UTR
ENST00000558986.5	alternative 5' UTR
ENST00000559467.5	alternative 5' UTR
ENST00000557904.5	alternative 5' UTR
ENST00000559370.5	alternative 5' UTR
ENST00000557986.5	alternative 5' UTR
ENST00000261520.9	MANE_select
ENST00000558512.5	alternative 5' UTR
ENST00000560072.5	alternative 5' UTR
ENST00000560406.5	alternative 5' UTR
ENST00000560520.1	alternative 5' UTR
ENST00000501579.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660694.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000558140.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000335670.11	MANE_select
ENST00000659704.1	Assembled from SLRseq reads (SRP049776)
ENST00000667845.1	Assembled from SLRseq reads (SRP049776)
ENST00000663342.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671250.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658521.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662958.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662940.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671175.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000559251.1	AI024082
ENST00000644861.2	CAGE supported TSS
ENST00000644861.2	LR annotation
ENST00000644861.2	MANE_select
ENST00000645819.1	CAGE supported TSS
ENST00000645819.1	LR annotation
ENST00000558919.1	not organism-supported
ENST00000650148.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000355522.5	MANE_select
ENST00000380392.4	MANE_select
ENST00000654663.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657134.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000622941.1	confirm experimentally
ENST00000561322.1	not organism-supported
ENST00000558940.1	hypothetical protein MGC15885
ENST00000560347.1	hypothetical protein MGC15885
ENST00000403994.9	CAGE supported TSS
ENST00000403994.9	LR annotation
ENST00000403994.9	MANE_select
ENST00000559397.6	NP_001018020.1
ENST00000561266.6	NP_001288173.1
ENST00000404484.9	NP_001317273.1
ENST00000317516.12	NP_001317280.1
ENST00000651622.1	alternative 3' UTR
ENST00000665500.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648659.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000656894.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662650.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000261893.9	MANE_select
ENST00000330964.10	MANE_select
ENST00000635699.1	alternative 5' UTR
ENST00000321437.9	MANE_select
ENST00000261879.10	MANE_select
ENST00000178638.8	MANE_select
ENST00000662408.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000560465.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000615045.1	confirm experimentally
ENST00000380324.8	MANE_select
ENST00000560202.1	not organism-supported
ENST00000649220.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000649220.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000668026.1	Assembled from SLRseq reads (SRP049776)
ENST00000657335.1	Assembled from SLRseq reads (SRP049776)
ENST00000656865.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656865.1	Assembled from SLRseq reads (SRP049776)
ENST00000560962.6	Assembled from SLRseq reads (SRP049776)
ENST00000559737.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665700.1	Assembled from SLRseq reads (SRP049776)
ENST00000360587.2	downstream ATG
ENST00000638704.2	MANE_select
ENST00000534939.2	downstream ATG
ENST00000560325.1	alternative 3' UTR
ENST00000443617.7	MANE_select
ENST00000558532.1	alternative 5' UTR
ENST00000560462.1	alternative 5' UTR
ENST00000560316.1	alternative 5' UTR
ENST00000559303.2	not organism-supported
ENST00000559306.1	alternative 5' UTR
ENST00000300030.8	MANE_select
ENST00000557835.5	alternative 3' UTR
ENST00000559844.6	MANE_select
ENST00000325881.9	MANE_select
ENST00000300026.4	MANE_select
ENST00000303052.13	MANE_select
ENST00000634654.1	alternative 5' UTR
ENST00000635270.1	alternative 5' UTR
ENST00000635514.1	alternative 5' UTR
ENST00000634529.1	NMD likely if extended
ENST00000635320.1	NMD likely if extended
ENST00000300035.9	MANE_select
ENST00000261884.8	MANE_select
ENST00000326005.10	Antizyme expression is auto-regulated by polyamine-enhanced translational frameshifting [PMID:17332016]; CDS constructed with 1bp deletion in exon 2
ENST00000326005.10	non canonical other
ENST00000560258.6	Antizyme expression is auto-regulated by polyamine-enhanced translational frameshifting [PMID:17332016]; CDS constructed with 1bp deletion in exon 2
ENST00000560258.6	non canonical other
ENST00000559912.2	Antizyme expression is auto-regulated by polyamine-enhanced translational frameshifting [PMID:17332016]; CDS constructed with 1bp deletion in exon 2
ENST00000559912.2	non canonical other
ENST00000300069.5	MANE_select
ENST00000559239.2	MANE_select
ENST00000559239.2	alternative 5' UTR
ENST00000323544.5	MANE_select
ENST00000665850.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000319580.13	MANE_select
ENST00000204566.7	MANE_select
ENST00000433215.6	alternative 5' UTR
ENST00000220058.9	MANE_select
ENST00000558460.5	alternative 3' UTR
ENST00000334287.3	MANE_select
ENST00000220062.9	MANE_select
ENST00000432196.5	CAGE supported TSS
ENST00000432196.5	MANE_select
ENST00000559089.6	MANE_select
ENST00000204549.9	MANE_select
ENST00000300107.7	MANE_select
ENST00000261883.6	MANE_select
ENST00000649807.2	MANE_select
ENST00000649807.2	NAGNAG splice site
ENST00000327987.9	MANE_select
ENST00000352385.3	MANE_select
ENST00000300141.11	MANE_select
ENST00000261875.10	MANE_select
ENST00000567744.5	NP_001193986
ENST00000431261.6	NP_001129515
ENST00000420799.7	NP_001193988
ENST00000420799.7	upstream ATG
ENST00000561769.1	alternative 5' UTR
ENST00000568573.1	alternative 5' UTR
ENST00000567940.1	alternative 5' UTR
ENST00000569565.1	alternative 5' UTR
ENST00000261892.11	MANE_select
ENST00000561863.1	alternative 3' UTR
ENST00000443035.8	MANE_select
ENST00000261890.7	MANE_select
ENST00000569896.1	NP_001193765.1
ENST00000409699.6	NP_115821.2
ENST00000319194.9	MGC4562
ENST00000319212.9	MANE_select
ENST00000532580.5	alternative 5' UTR
ENST00000530615.1	alternative 5' UTR
ENST00000261881.9	FLJ20516
ENST00000261881.9	MANE_select
ENST00000307102.10	MANE_select
ENST00000316634.6	MANE_select
ENST00000307961.11	MANE_select
ENST00000307897.10	MANE_select
ENST00000288840.10	MANE_select
ENST00000670149.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665471.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655852.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000327367.9	MANE_select
ENST00000679624.1	alternative 5' UTR
ENST00000261880.10	MANE_select
ENST00000335894.9	MANE_select
ENST00000512104.5	NP_073621.2
ENST00000669759.1	Assembled from SLRseq reads (SRP049776)
ENST00000670822.1	Assembled from SLRseq reads (SRP049776)
ENST00000657717.1	Assembled from SLRseq reads (SRP049776)
ENST00000665615.1	Assembled from RACEseq reads
ENST00000658166.1	Assembled from SLRseq reads (SRP049776)
ENST00000342683.6	MANE_select
ENST00000178640.10	MANE_select
ENST00000354498.9	NP_001193733.1
ENST00000439036.5	QC splicing correct
ENST00000380035.3	MANE_select
ENST00000249636.11	MANE_select
ENST00000637888.1	alternative 3' UTR
ENST00000448060.7	upstream ATG
ENST00000467889.2	upstream ATG
ENST00000354678.3	alternative 5' UTR
ENST00000249806.11	LR annotation
ENST00000249806.11	MANE_select
ENST00000638144.1	NMD likely if extended
ENST00000563917.2	NMD likely if extended
ENST00000637223.1	alternative 3' UTR
ENST00000306917.5	MANE_select
ENST00000315757.9	MANE_select
ENST00000315757.9	NP_795896.4
ENST00000660959.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000261861.10	CAGE supported TSS
ENST00000261861.10	LR annotation
ENST00000261861.10	MANE_select
ENST00000543950.3	CAGE supported TSS
ENST00000465139.6	MANE_select
ENST00000409628.6	QC splicing correct
ENST00000310673.4	MANE_select
ENST00000650404.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000388866.8	MANE_select
ENST00000656674.1	Assembled from RACEseq reads
ENST00000261858.7	MANE_select
ENST00000261858.7	genebuild_only_MANE
ENST00000565312.3	Assembled from SLRseq reads (SRP049776)
ENST00000395407.7	MANE_select
ENST00000561153.5	alternative 5' UTR
ENST00000669669.1	Assembled from SLRseq reads (SRP049776)
ENST00000663170.1	Assembled from SLRseq reads (SRP049776)
ENST00000659608.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000679126.1	MANE_select
ENST00000647715.1	CAGE supported TSS
ENST00000647715.1	LR annotation
ENST00000559279.6	LR annotation
ENST00000260379.11	MANE_select
ENST00000668790.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655251.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665434.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660592.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656433.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000558633.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669701.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660495.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654249.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653427.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669215.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663838.1	Assembled from SLRseq reads (SRP049776)
ENST00000661448.1	Assembled from SLRseq reads (SRP049776)
ENST00000653708.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668587.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659150.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663039.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662925.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653225.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660367.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000498938.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654004.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661726.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661726.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000671448.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661515.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654883.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658420.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000644274.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000665425.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660521.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660880.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654529.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653477.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668982.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653825.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000558385.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657438.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650343.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000451782.7	MANE_select
ENST00000451782.7	NP_001098662.1
ENST00000559048.5	NAGNAG splice site
ENST00000560939.5	NAGNAG splice site
ENST00000558201.5	NAGNAG splice site
ENST00000655612.1	Assembled from SLRseq reads (SRP049776)
ENST00000630100.1	Based on RNAseq from Abdelmohsen et al. (2013) PMID:23758631
ENST00000629082.1	Based on RNAseq from Abdelmohsen et al. (2013) PMID:23758631
ENST00000322954.11	MANE_select
ENST00000379983.6	NP_001008225.1
ENST00000299213.10	MANE_select
ENST00000557800.1	confirm experimentally
ENST00000260382.10	MANE_select
ENST00000249861.9	MANE_select
ENST00000355327.7	FLJ13710
ENST00000355327.7	QC splicing correct
ENST00000620694.1	alternative 5' UTR
ENST00000357769.4	FLJ13710
ENST00000668533.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653119.1	Assembled from SLRseq reads (SRP049776)
ENST00000564562.2	Assembled from SLRseq reads (SRP049776)
ENST00000665266.1	Assembled from SLRseq reads (SRP049776)
ENST00000648513.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000617575.5	MANE_select
ENST00000356056.10	MANE_select
ENST00000340912.6	MANE_select
ENST00000309731.12	MANE_select
ENST00000335181.10	MANE_select
ENST00000569795.6	MANE_select
ENST00000287202.10	MANE_select
ENST00000543764.6	overlapping uORF
ENST00000395258.7	upstream uORF
ENST00000268097.10	MANE_select
ENST00000649825.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000341689.4	MANE_select
ENST00000379887.9	MANE_select
ENST00000567762.1	NMD likely if extended
ENST00000565305.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000565543.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000311755.6	MANE_select
ENST00000268057.9	MANE_select
ENST00000670622.1	Assembled from SLRseq reads (SRP049776)
ENST00000649889.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000261908.11	MANE_select
ENST00000261908.11	genebuild_only_MANE
ENST00000558964.5	NP_001166095
ENST00000261917.4	CAGE supported TSS
ENST00000261917.4	LR annotation
ENST00000261917.4	MANE_select
ENST00000331090.11	MANE_select
ENST00000345330.9	MANE_select
ENST00000628401.1	PMID: 23395002
ENST00000628401.1	Yang F et al. Mol. Cell 2013
ENST00000558689.5	alternative 5' UTR
ENST00000318443.10	MANE_select
ENST00000561416.5	alternative 5' UTR
ENST00000560995.5	alternative 5' UTR
ENST00000561260.5	alternative 5' UTR
ENST00000620960.1	CAGE supported TSS
ENST00000663106.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000562031.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000569137.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000300504.7	MANE_select
ENST00000562739.6	Assembled from SLRseq reads (SRP049776)
ENST00000261921.8	MANE_select
ENST00000541638.6	MANE_select
ENST00000566081.5	alternative 5' UTR
ENST00000268058.8	MANE_select
ENST00000395132.6	QC splicing correct
ENST00000567543.5	alternative 3' UTR
ENST00000436891.7	alternative 3' UTR
ENST00000659672.1	Assembled from SLRseq reads (SRP049776)
ENST00000290438.3	MANE_select
ENST00000361742.7	QC splicing correct
ENST00000453268.3	MANE_select
ENST00000668929.1	Assembled from SLRseq reads (SRP049776)
ENST00000659491.1	Assembled from SLRseq reads (SRP049776)
ENST00000249842.8	MANE_select
ENST00000559510.1	alternative 5' UTR
ENST00000560862.1	alternative 5' UTR
ENST00000395118.1	alternative 5' UTR
ENST00000395105.9	MANE_select
ENST00000395105.9	alternative 5' UTR
ENST00000449139.6	alternative 5' UTR
ENST00000535552.5	NP_001185969.1
ENST00000432245.6	NP_001136092.1
ENST00000574570.1	NMD likely if extended
ENST00000571341.1	alternative 5' UTR
ENST00000559243.1	NMD likely if extended
ENST00000398814.8	MANE_select
ENST00000358632.8	NP_001093243
ENST00000268053.11	MANE_select
ENST00000566674.5	alternative 5' UTR
ENST00000450547.1	alternative 5' UTR
ENST00000450547.1	upstream uORF
ENST00000569662.1	alternative 5' UTR
ENST00000261918.9	MANE_select
ENST00000542748.6	NP_001139502.1
ENST00000543145.6	NP_001139501.1
ENST00000662636.1	Assembled from SLRseq reads (SRP049776)
ENST00000567435.5	alternative 5' UTR
ENST00000565335.5	alternative 5' UTR
ENST00000395081.7	MANE_select
ENST00000395081.7	alternative 5' UTR
ENST00000564488.5	alternative 5' UTR
ENST00000657781.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664892.1	Assembled from SLRseq reads (SRP049776)
ENST00000666989.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659591.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000564621.2	Assembled from SLRseq reads (SRP049776)
ENST00000670462.1	Assembled from SLRseq reads (SRP049776)
ENST00000346246.10	MANE_select
ENST00000345005.8	NP_003983.2
ENST00000395066.8	upstream ATG
ENST00000568139.6	alternative 5' UTR
ENST00000566126.5	alternative 5' UTR
ENST00000315127.9	MANE_select
ENST00000647659.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000379727.8	CAGE supported TSS
ENST00000379727.8	LR annotation
ENST00000379727.8	MANE_select
ENST00000343932.5	CAGE supported TSS
ENST00000343932.5	MANE_select
ENST00000309664.10	MANE_select
ENST00000309664.10	upstream ATG
ENST00000395018.6	MANE_select
ENST00000440863.7	MANE_select
ENST00000647587.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000268099.13	MANE_select
ENST00000352410.9	MANE_select
ENST00000357635.10	MANE_select
ENST00000322347.11	MANE_select
ENST00000322177.6	MANE_select
ENST00000425597.8	MANE_select
ENST00000342932.8	MANE_select
ENST00000394987.5	MANE_select
ENST00000394987.5	alternative 5' UTR
ENST00000666240.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000267935.13	MANE_select
ENST00000480484.5	alternative 3' UTR
ENST00000355059.9	MANE_select
ENST00000267978.10	MANE_select
ENST00000394947.8	MANE_select
ENST00000360439.8	alternative 5' UTR
ENST00000618819.5	MANE_select
ENST00000308588.10	MANE_select
ENST00000308527.6	MANE_select
ENST00000308508.5	MANE_select
ENST00000332145.3	MANE_select
ENST00000661723.1	Assembled from SLRseq reads (SRP049776)
ENST00000658217.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658217.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000661459.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664305.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670625.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654378.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667063.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655161.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656245.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000569596.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668053.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000267938.9	MANE_select
ENST00000308275.8	MANE_select
ENST00000394907.8	MANE_select
ENST00000388942.8	MANE_select
ENST00000557943.6	MANE_select
ENST00000660046.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000290759.9	MANE_select
ENST00000558656.1	not organism-supported
ENST00000563290.6	MANE_select
ENST00000394885.8	MANE_select
ENST00000394885.8	upstream ATG
ENST00000558012.6	MANE_select
ENST00000267970.9	MANE_select
ENST00000346495.6	NP_944492.1
ENST00000558394.5	NMD likely if extended
ENST00000560626.6	NP_079052.2
ENST00000564328.5	alternative 5' UTR
ENST00000565820.5	alternative 5' UTR
ENST00000336216.9	MANE_select
ENST00000355300.7	MANE_select
ENST00000559893.5	alternative 5' UTR
ENST00000668886.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654930.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000300584.7	NP_653173.1
ENST00000409931.7	NP_055894.6
ENST00000328828.5	confirm experimentally
ENST00000258930.8	MANE_select
ENST00000299518.7	MANE_select
ENST00000258873.9	MANE_select
ENST00000343789.7	alternative 5' UTR
ENST00000446172.2	NP_001123655.1
ENST00000267973.7	MANE_select
ENST00000299529.7	MANE_select
ENST00000258886.13	MANE_select
ENST00000388988.9	MANE_select
ENST00000388988.9	genebuild_only_MANE
ENST00000559082.5	alternative 5' UTR
ENST00000413382.6	NP_001096138.1
ENST00000044462.12	MANE_select
ENST00000557929.5	NAGNAG splice site
ENST00000559365.5	alternative 5' UTR
ENST00000559437.5	alternative 5' UTR
ENST00000560737.5	alternative 5' UTR
ENST00000326828.6	MANE_select
ENST00000261751.8	MANE_select
ENST00000388820.5	MANE_select
ENST00000426013.7	MANE_select
ENST00000559751.1	NAGNAG splice site
ENST00000676763.1	CAGE supported TSS
ENST00000676763.1	NAGNAG splice site
ENST00000220166.10	MANE_select
ENST00000676510.1	alternative 3' UTR
ENST00000649928.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000649928.2	NAGNAG splice site
ENST00000678487.1	NAGNAG splice site
ENST00000677207.1	CAGE supported TSS
ENST00000678644.1	alternative 5' UTR
ENST00000677316.1	alternative 5' UTR
ENST00000678799.1	alternative 3' UTR
ENST00000528191.6	CAGE supported TSS
ENST00000679172.1	alternative 3' UTR
ENST00000677534.1	NAGNAG splice site
ENST00000679047.1	alternative 3' UTR
ENST00000676865.1	NAGNAG splice site
ENST00000677874.1	alternative 3' UTR
ENST00000677254.1	NAGNAG splice site
ENST00000678033.1	NAGNAG splice site
ENST00000679211.1	alternative 3' UTR
ENST00000677320.1	alternative 3' UTR
ENST00000529612.6	NAGNAG splice site
ENST00000558480.7	MANE_select
ENST00000558480.7	NP_001139120.1
ENST00000394745.3	NP_722522.1
ENST00000671603.1	Assembled from SLRseq reads (SRP049776)
ENST00000668181.1	Assembled from SLRseq reads (SRP049776)
ENST00000661423.1	Assembled from SLRseq reads (SRP049776)
ENST00000560533.6	Assembled from SLRseq reads (SRP049776)
ENST00000661500.1	Assembled from SLRseq reads (SRP049776)
ENST00000557790.6	Assembled from SLRseq reads (SRP049776)
ENST00000559979.6	Assembled from SLRseq reads (SRP049776)
ENST00000299705.10	MANE_select
ENST00000654745.1	Assembled from SLRseq reads (SRP049776)
ENST00000305428.8	MANE_select
ENST00000258874.4	MANE_select
ENST00000479961.1	NP_001186689.1
ENST00000479961.1	upstream uORF
ENST00000494999.1	upstream uORF
ENST00000655674.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000478497.5	alternative 5' UTR
ENST00000267953.4	MANE_select
ENST00000559157.5	alternative 5' UTR
ENST00000261749.11	MANE_select
ENST00000558494.5	alternative 5' UTR
ENST00000559835.5	alternative 5' UTR
ENST00000559775.5	alternative 5' UTR
ENST00000558997.5	alternative 5' UTR
ENST00000558087.5	alternative 5' UTR
ENST00000558022.5	alternative 5' UTR
ENST00000537726.5	alternative 5' UTR
ENST00000558767.5	alternative 5' UTR
ENST00000261755.9	alternative 5' UTR
ENST00000561369.1	alternative 5' UTR
ENST00000561421.6	MANE_select
ENST00000561421.6	alternative 5' UTR
ENST00000560778.3	MANE_select
ENST00000558244.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000647752.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000657265.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656160.1	Assembled from SLRseq reads (SRP049776)
ENST00000653750.1	Assembled from SLRseq reads (SRP049776)
ENST00000303329.9	MANE_select
ENST00000533983.5	alternative 5' UTR
ENST00000650492.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000666336.1	Assembled from RACEseq reads
ENST00000258884.5	MANE_select
ENST00000658807.1	Assembled from SLRseq reads (SRP049776)
ENST00000220244.7	alternative 5' UTR
ENST00000394685.8	MANE_select
ENST00000356249.9	alternative 5' UTR
ENST00000261758.6	MANE_select
ENST00000267984.4	MANE_select
ENST00000676205.1	upstream ATG
ENST00000286732.5	MANE_select
ENST00000286732.5	upstream ATG
ENST00000559383.5	alternative 5' UTR
ENST00000302824.7	MANE_select
ENST00000559913.1	NMD likely if extended
ENST00000667641.1	Assembled from SLRseq reads (SRP049776)
ENST00000654429.1	Assembled from SLRseq reads (SRP049776)
ENST00000667509.1	Assembled from SLRseq reads (SRP049776)
ENST00000667513.1	Assembled from SLRseq reads (SRP049776)
ENST00000662589.1	Assembled from SLRseq reads (SRP049776)
ENST00000664001.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664001.1	Assembled from SLRseq reads (SRP049776)
ENST00000559277.2	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000654210.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667849.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665273.1	Assembled from SLRseq reads (SRP049776)
ENST00000669758.1	Assembled from SLRseq reads (SRP049776)
ENST00000654536.1	Assembled from SLRseq reads (SRP049776)
ENST00000612811.3	Assembled from SLRseq reads (SRP049776)
ENST00000359440.6	MANE_select
ENST00000558726.5	NAGNAG splice site
ENST00000665567.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000560054.6	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000668584.1	Assembled from SLRseq reads (SRP049776)
ENST00000664621.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000329713.5	MANE_select
ENST00000654578.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671667.1	Assembled from SLRseq reads (SRP049776)
ENST00000268206.12	MANE_select
ENST00000650113.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648383.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000647841.1	CAGE supported TSS
ENST00000647841.1	LR annotation
ENST00000647841.1	MANE_select
ENST00000611163.4	alternative 5' UTR
ENST00000617462.4	alternative 5' UTR
ENST00000617522.4	alternative 5' UTR
ENST00000568994.1	alternative 5' UTR
ENST00000569257.5	alternative 5' UTR
ENST00000567678.1	alternative 5' UTR
ENST00000654760.1	Assembled from SLRseq reads (SRP049776)
ENST00000642989.2	CAGE supported TSS
ENST00000535359.6	LR annotation
ENST00000535359.6	MANE_select
ENST00000668990.2	LR annotation
ENST00000660624.1	CAGE supported TSS
ENST00000669880.1	CAGE supported TSS
ENST00000669880.1	NMD likely if extended
ENST00000666894.1	CAGE supported TSS
ENST00000541693.5	CAGE supported TSS
ENST00000542200.2	NP_001335369.1
ENST00000560529.1	NMD likely if extended
ENST00000624471.1	confirm experimentally
ENST00000661203.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000334574.12	MANE_select
ENST00000561368.1	alternative 5' UTR
ENST00000286760.5	MANE_select
ENST00000558090.2	alternative 5' UTR
ENST00000450735.7	MANE_select
ENST00000304191.4	MANE_select
ENST00000538348.6	NP_001153588.1
ENST00000510873.6	QC splicing correct
ENST00000451195.7	NP_001153587.1
ENST00000304177.10	MANE_select
ENST00000304177.10	NM_144597.2
ENST00000261721.9	MANE_select
ENST00000654100.1	Assembled from SLRseq reads (SRP049776)
ENST00000665616.1	Assembled from SLRseq reads (SRP049776)
ENST00000659954.1	Assembled from SLRseq reads (SRP049776)
ENST00000322019.14	MANE_select
ENST00000299633.7	MANE_select
ENST00000427482.7	MANE_select
ENST00000286744.10	MANE_select
ENST00000510439.7	MANE_select
ENST00000510439.7	not best-in-genome evidence
ENST00000561403.6	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000618330.3	Assembled from SLRseq reads (SRP049776)
ENST00000658287.1	Assembled from SLRseq reads (SRP049776)
ENST00000448803.6	alternative 5' UTR
ENST00000546275.1	alternative 5' UTR
ENST00000546148.6	MANE_select
ENST00000442073.3	alternative 5' UTR
ENST00000334141.7	NP_060364
ENST00000502939.2	alternative 5' UTR
ENST00000379358.7	NP_001007073
ENST00000540894.5	alternative 3' UTR
ENST00000649495.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000434634.7	MANE_select
ENST00000360476.8	MANE_select
ENST00000268220.12	MANE_select
ENST00000648837.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000560079.7	MANE_select
ENST00000258888.6	CAGE supported TSS
ENST00000258888.6	MANE_select
ENST00000258888.6	upstream ATG
ENST00000394573.6	MANE_select
ENST00000394573.6	genebuild_only_MANE
ENST00000657848.1	Assembled from SLRseq reads (SRP049776)
ENST00000394553.6	MANE_select
ENST00000394553.6	genebuild_only_MANE
ENST00000648573.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000394518.7	MANE_select
ENST00000560256.1	alternative 5' UTR
ENST00000558166.2	CAGE supported TSS
ENST00000558811.2	CAGE supported TSS
ENST00000560340.5	CAGE supported TSS
ENST00000560676.5	CAGE supported TSS
ENST00000557852.2	CAGE supported TSS
ENST00000337975.6	MANE_select
ENST00000562495.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000562495.3	non canonical polymorphism
ENST00000660161.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000567981.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654064.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662763.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664634.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653333.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661228.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662657.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661185.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663008.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670539.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655711.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663547.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663821.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669223.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657080.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655989.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657460.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655250.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670766.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671552.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661993.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668761.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658786.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653563.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670124.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660478.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657762.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656269.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668270.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000614907.3	CAGE supported TSS
ENST00000614907.3	MANE_select
ENST00000681381.1	SLR-seq_HsBN_lib8
ENST00000566878.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665121.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656130.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670668.1	Assembled from SLRseq reads (SRP049776)
ENST00000394480.6	54896
ENST00000312475.5	MANE_select
ENST00000649547.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000325844.9	MANE_select
ENST00000268148.13	MANE_select
ENST00000660022.1	Assembled from SLRseq reads (SRP049776)
ENST00000660890.1	Assembled from SLRseq reads (SRP049776)
ENST00000332810.4	MANE_select
ENST00000379224.10	CAGE supported TSS
ENST00000560741.5	alternative 5' UTR
ENST00000558942.6	align_id:3600851|asmbl_91016
ENST00000306072.10	MANE_select
ENST00000560601.4	MANE_select
ENST00000439576.7	confirm experimentally
ENST00000359595.8	MANE_select
ENST00000268150.13	MANE_select
ENST00000566497.5	alternative 3' UTR
ENST00000668304.1	Assembled from SLRseq reads (SRP049776)
ENST00000671490.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000352732.10	MANE_select
ENST00000268125.10	MANE_select
ENST00000310775.12	MANE_select
ENST00000676003.1	alternative 5' UTR
ENST00000635831.1	alternative 3' UTR
ENST00000631044.2	QC splicing correct
ENST00000268124.11	CAGE supported TSS
ENST00000268124.11	LR annotation
ENST00000268124.11	MANE_select
ENST00000442287.6	alternative 5' UTR
ENST00000528881.2	QC splicing correct
ENST00000664970.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654171.1	Assembled from SLRseq reads (SRP049776)
ENST00000661040.1	Assembled from SLRseq reads (SRP049776)
ENST00000657897.1	Assembled from SLRseq reads (SRP049776)
ENST00000654184.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654184.1	Assembled from SLRseq reads (SRP049776)
ENST00000658194.1	Assembled from SLRseq reads (SRP049776)
ENST00000661036.1	Assembled from SLRseq reads (SRP049776)
ENST00000659235.1	Assembled from SLRseq reads (SRP049776)
ENST00000669499.1	Assembled from SLRseq reads (SRP049776)
ENST00000654079.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654079.1	Assembled from SLRseq reads (SRP049776)
ENST00000670779.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670779.1	Assembled from SLRseq reads (SRP049776)
ENST00000658764.1	Assembled from SLRseq reads (SRP049776)
ENST00000655673.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656907.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659850.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662942.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662043.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669037.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666816.1	Assembled from SLRseq reads (SRP049776)
ENST00000658770.1	Assembled from SLRseq reads (SRP049776)
ENST00000560596.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667285.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668524.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665619.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662152.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000559235.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000558692.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665852.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000558754.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669098.1	Assembled from SLRseq reads (SRP049776)
ENST00000538734.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669645.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660601.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660922.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670238.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000546186.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665086.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655914.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664925.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667575.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664499.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662136.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662255.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664345.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670485.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664594.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671075.1	Assembled from SLRseq reads (SRP049776)
ENST00000663717.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663717.1	Assembled from SLRseq reads (SRP049776)
ENST00000671447.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671447.1	Assembled from SLRseq reads (SRP049776)
ENST00000268122.9	MANE_select
ENST00000649642.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000558360.1	alternative 3' UTR
ENST00000561108.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000559967.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660770.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661183.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000268138.12	MANE_select
ENST00000268138.12	NAGNAG splice site
ENST00000560985.5	NAGNAG splice site
ENST00000394412.8	MANE_select
ENST00000394412.8	QC splicing correct
ENST00000677187.1	align_id:3600958|asmbl_91123
ENST00000300055.10	MANE_select
ENST00000430628.2	alternative 5' UTR
ENST00000300056.8	MANE_select
ENST00000268130.12	MANE_select
ENST00000341735.5	LR annotation
ENST00000341735.5	MANE_select
ENST00000300060.7	MANE_select
ENST00000560137.2	alternative 5' UTR
ENST00000559874.2	alternative 5' UTR
ENST00000336418.9	MANE_select
ENST00000357484.10	MANE_select
ENST00000624460.1	confirm experimentally
ENST00000268154.9	MANE_select
ENST00000559419.1	alternative 5' UTR
ENST00000330062.8	MANE_select
ENST00000561101.3	Assembled from SLRseq reads (SRP049776)
ENST00000559322.5	alternative 5' UTR
ENST00000332496.10	alternative 5' UTR
ENST00000558895.5	alternative 5' UTR
ENST00000559792.5	alternative 5' UTR
ENST00000558051.2	NMD likely if extended
ENST00000558065.1	NMD likely if extended
ENST00000328649.11	MANE_select
ENST00000650306.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000561433.5	alternative 5' UTR
ENST00000559204.5	alternative 5' UTR
ENST00000558291.1	alternative 5' UTR
ENST00000379095.5	MANE_select
ENST00000354377.8	MANE_select
ENST00000558586.1	alternative 5' UTR
ENST00000268182.10	MANE_select
ENST00000268184.11	MANE_select
ENST00000268184.11	NAGNAG splice site
ENST00000268184.11	non canonical U12
ENST00000420329.6	NAGNAG splice site
ENST00000420329.6	non canonical U12
ENST00000558619.5	non canonical U12
ENST00000561119.5	non canonical U12
ENST00000558005.1	non canonical U12
ENST00000648196.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000500496.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658128.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661163.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000355112.8	MANE_select
ENST00000648453.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000558599.1	NMD likely if extended
ENST00000656405.1	Assembled from SLRseq reads (SRP049776)
ENST00000653647.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000268171.8	MANE_select
ENST00000618099.4	alternative 5' UTR
ENST00000681804.1	Snaptron_GTEX_filtered_canonical_pos
ENST00000416779.1	alternative 5' UTR
ENST00000414248.6	NP_001137257
ENST00000452243.5	alternative 5' UTR
ENST00000328850.8	MANE_select
ENST00000443697.1	alternative 5' UTR
ENST00000394300.7	NP_001137255
ENST00000444422.2	NP_001137256
ENST00000448367.5	NMD likely if extended
ENST00000558290.5	alternative 5' UTR
ENST00000558853.5	alternative 5' UTR
ENST00000559999.5	alternative 5' UTR
ENST00000560534.2	QC splicing correct
ENST00000559717.6	MANE_select
ENST00000559965.5	alternative 5' UTR
ENST00000559132.3	QC splicing correct
ENST00000558640.5	NMD likely if extended
ENST00000394272.8	MANE_select
ENST00000646620.1	alternative 5' UTR
ENST00000480470.5	CAGE supported TSS
ENST00000418476.2	CAGE supported TSS
ENST00000418476.2	MANE_select
ENST00000556618.1	alternative 5' UTR
ENST00000394249.8	MANE_select
ENST00000554388.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660154.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000654370.1	Assembled from SLRseq reads (SRP049776)
ENST00000656754.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657141.1	Assembled from SLRseq reads (SRP049776)
ENST00000333371.8	MANE_select
ENST00000650291.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000394232.6	MANE_select
ENST00000650140.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000555947.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664984.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000318445.11	MANE_select
ENST00000268164.8	MANE_select
ENST00000555434.1	QC splicing correct
ENST00000653070.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653070.1	Assembled from RACEseq reads
ENST00000654017.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654017.1	Assembled from RACEseq reads
ENST00000654017.1	Assembled from SLRseq reads (SRP049776)
ENST00000554542.2	Assembled from RACEseq reads
ENST00000557075.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654959.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000555864.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671549.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665942.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670432.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000625146.1	confirm experimentally
ENST00000654742.1	Assembled from SLRseq reads (SRP049776)
ENST00000658288.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000553393.5	alternative 5' UTR
ENST00000327355.6	MANE_select
ENST00000555748.5	alternative 5' UTR
ENST00000555064.5	alternative 5' UTR
ENST00000555696.5	alternative 5' UTR
ENST00000557480.5	alternative 5' UTR
ENST00000557398.2	alternative 5' UTR
ENST00000629685.2	alternative 5' UTR
ENST00000628375.2	QC splicing correct
ENST00000420239.7	LR annotation
ENST00000394196.9	MANE_select
ENST00000626782.2	CAGE supported TSS
ENST00000628181.1	QC splicing correct
ENST00000628118.1	NMD likely if extended
ENST00000637789.1	non canonical other
ENST00000650169.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000647994.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000670300.1	Assembled from RACEseq reads
ENST00000667030.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000554105.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657519.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653095.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668028.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667940.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000657206.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654088.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661485.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000554318.2	QC splicing correct
ENST00000653322.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000557481.6	QC splicing correct
ENST00000660982.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669397.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658920.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661055.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664929.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657935.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667659.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653794.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000555023.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653341.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000557715.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000555772.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663183.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659318.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668200.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661477.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669164.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667407.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669582.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653271.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663747.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669877.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670913.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662634.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653089.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000556030.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663638.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656752.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657633.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655344.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668413.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653987.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664216.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655821.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664456.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669081.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661341.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669391.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000555281.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666582.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669599.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656375.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665888.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666819.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657833.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659365.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659365.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000663418.1	Assembled from SLRseq reads (SRP049776)
ENST00000665813.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664063.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655932.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653939.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664215.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657503.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652797.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661202.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659027.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670232.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657169.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657668.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658249.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669185.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000555364.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653712.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661588.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668781.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658527.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658115.1	Assembled from SLRseq reads (SRP049776)
ENST00000647740.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000661370.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648065.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000554649.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653816.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658436.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659461.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659660.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658592.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659002.1	Assembled from SLRseq reads (SRP049776)
ENST00000670739.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670739.1	Assembled from SLRseq reads (SRP049776)
ENST00000661491.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661491.1	Assembled from SLRseq reads (SRP049776)
ENST00000614853.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659107.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665255.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658041.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658041.1	Assembled from SLRseq reads (SRP049776)
ENST00000661153.1	Assembled from SLRseq reads (SRP049776)
ENST00000655274.1	Assembled from SLRseq reads (SRP049776)
ENST00000659343.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656019.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654052.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654052.1	Assembled from SLRseq reads (SRP049776)
ENST00000653272.1	Assembled from SLRseq reads (SRP049776)
ENST00000664421.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670445.1	Assembled from SLRseq reads (SRP049776)
ENST00000611265.5	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662295.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000660741.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000555332.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658123.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663436.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664127.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649675.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000650234.1	"RP11-398J10.1-003"    348889 349027 (139)
ENST00000650234.1	"RP11-398J10.1-003"    350855 350964 (110)
ENST00000650234.1	"RP11-398J10.1-003"    394772 395091 (320)
ENST00000650234.1	"RP11-398J10.1-003"    395484 395570 (87)
ENST00000650234.1	"RP11-398J10.1-003"    398599 398742 (144)
ENST00000650234.1	"RP11-398J10.1-003"    403145 404101 (957)
ENST00000650234.1	3|asmbl_91698
ENST00000650234.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000663815.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653141.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670891.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655842.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656549.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663844.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668885.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658663.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000554412.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661571.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000612595.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667344.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000614344.5	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663174.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000666682.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661536.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667774.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666386.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656202.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665732.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648034.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000558929.5	QC splicing correct
ENST00000656585.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661764.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660029.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000558885.1	QC splicing correct
ENST00000650320.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000394166.8	MANE_select
ENST00000664133.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667348.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668783.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656727.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000650802.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000671068.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000559611.5	QC splicing correct
ENST00000558553.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671619.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000561002.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000559321.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669885.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660428.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653984.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666169.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664769.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656523.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655490.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659377.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667810.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000559394.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658159.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653612.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662202.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655922.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657749.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653998.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658446.1	Assembled from SLRseq reads (SRP049776)
ENST00000658901.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000656917.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668613.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669932.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671366.1	Assembled from SLRseq reads (SRP049776)
ENST00000559363.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669591.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660115.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658524.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658023.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647870.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000666698.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666698.1	Assembled from SLRseq reads (SRP049776)
ENST00000664109.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000618064.2	Assembled from SLRseq reads (SRP049776)
ENST00000671187.1	Assembled from SLRseq reads (SRP049776)
ENST00000664171.1	Assembled from RACEseq reads
ENST00000655088.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664000.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670719.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653717.1	Assembled from SLRseq reads (SRP049776)
ENST00000268042.7	MANE_select
ENST00000660238.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660238.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000661284.1	Assembled from SLRseq reads (SRP049776)
ENST00000657981.1	Assembled from SLRseq reads (SRP049776)
ENST00000671500.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661923.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663386.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649950.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000560360.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660778.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670234.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665630.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661781.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665807.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660065.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670525.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671201.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000561215.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000560195.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664520.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660771.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659338.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664288.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663373.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661847.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668582.1	Assembled from SLRseq reads (SRP049776)
ENST00000560221.1	QC splicing correct
ENST00000650285.1	CAGE supported TSS
ENST00000650285.1	LR annotation
ENST00000650285.1	MANE_select
ENST00000649865.1	CAGE supported TSS
ENST00000649865.1	LR annotation
ENST00000560972.1	NMD likely if extended
ENST00000670949.1	Assembled from SLRseq reads (SRP049776)
ENST00000535714.2	MANE_select
ENST00000535714.2	upstream uORF
ENST00000665845.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667025.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669003.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663917.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671414.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657814.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000336292.11	MANE_select
ENST00000394132.7	MANE_select
ENST00000558663.5	alternative 5' UTR
ENST00000558663.5	upstream uORF
ENST00000394135.7	alternative 5' UTR
ENST00000394135.7	upstream uORF
ENST00000561365.5	alternative 5' UTR
ENST00000560279.5	alternative 5' UTR
ENST00000560279.5	upstream uORF
ENST00000560860.5	alternative 5' UTR
ENST00000560772.5	alternative 5' UTR
ENST00000558078.5	alternative 5' UTR
ENST00000560235.1	alternative 5' UTR
ENST00000559399.5	NMD likely if extended
ENST00000301981.8	MANE_select
ENST00000558500.5	QC splicing correct
ENST00000558861.1	alternative 5' UTR
ENST00000653247.1	CAGE supported TSS
ENST00000560493.5	alternative 5' UTR
ENST00000354410.9	overlapping uORF
ENST00000558812.5	NP_001124399
ENST00000558049.5	alternative 5' UTR
ENST00000449277.6	NP_001124400
ENST00000559903.1	alternative 5' UTR
ENST00000344791.6	protein_id: AAH41097.2
ENST00000559714.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664279.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653567.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661885.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670817.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000560059.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670627.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668719.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656644.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665821.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000558188.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664300.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660061.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662069.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662997.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670236.1	Assembled from SLRseq reads (SRP049776)
ENST00000528696.3	QC splicing correct
ENST00000268070.9	MANE_select
ENST00000568565.2	QC splicing correct
ENST00000647665.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000662214.1	Assembled from SLRseq reads (SRP049776)
ENST00000664239.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000679737.1	CAGE supported TSS
ENST00000679737.1	MANE_select
ENST00000538112.6	alternative 5' UTR
ENST00000394113.5	alternative 5' UTR
ENST00000558884.6	alternative 5' UTR
ENST00000559639.1	alternative 5' UTR
ENST00000314742.13	MANE_select
ENST00000559736.5	alternative 5' UTR
ENST00000559577.5	alternative 5' UTR
ENST00000560934.1	alternative 5' UTR
ENST00000560272.1	alternative 5' UTR
ENST00000332783.12	MANE_select
ENST00000558747.5	QC splicing correct
ENST00000561231.5	QC splicing correct
ENST00000558427.1	QC splicing correct
ENST00000647806.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000329841.10	MANE_select
ENST00000656756.1	Assembled from SLRseq reads (SRP049776)
ENST00000659873.1	Assembled from SLRseq reads (SRP049776)
ENST00000534045.5	alternative 5' UTR
ENST00000388948.8	MANE_select
ENST00000388948.8	NP_078928.3
ENST00000525284.5	NAGNAG splice site
ENST00000525617.2	NAGNAG splice site
ENST00000538064.1	NAGNAG splice site
ENST00000559857.1	QC splicing correct
ENST00000660891.1	Assembled from SLRseq reads (SRP049776)
ENST00000254190.4	MANE_select
ENST00000526049.6	MANE_select
ENST00000526049.6	alternative 3' UTR
ENST00000254193.11	MANE_select
ENST00000560856.5	NMD likely if extended
ENST00000676598.1	align_id:3601852|asmbl_92017
ENST00000677962.1	align_id:3601880|asmbl_92045
ENST00000611716.5	MANE_select
ENST00000677528.1	align_id:3601875|asmbl_92040
ENST00000679007.1	align_id:3601871|asmbl_92036
ENST00000632686.1	LN714797.1
ENST00000559417.2	align_id:1315122|asmbl_35025
ENST00000331826.12	align_id:1315122|asmbl_35025
ENST00000331826.12	long_read_pipeline
ENST00000677996.1	align_id:1315127|asmbl_35030
ENST00000678918.1	align_id:1315132|asmbl_35035
ENST00000655738.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655738.1	Assembled from SLRseq reads (SRP049776)
ENST00000666302.1	Assembled from SLRseq reads (SRP049776)
ENST00000618724.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000347970.7	NP_079417.2
ENST00000333202.8	MANE_select
ENST00000333202.8	NP_510883.2
ENST00000335968.8	MANE_select
ENST00000335968.8	NP_689547.2
ENST00000561463.1	QC splicing correct
ENST00000328882.6	ENA ID EGAS00001001486
ENST00000328882.6	MANE_select
ENST00000332238.5	ENA ID EGAS00001001486
ENST00000332238.5	MANE_select
ENST00000641004.1	ENA ID EGAS00001001486
ENST00000641004.1	NCBI GEO ID GSE80249
ENST00000668426.1	Assembled from SLRseq reads (SRP049776)
ENST00000561145.1	QC splicing correct
ENST00000559163.6	QC splicing correct
ENST00000558784.5	QC splicing correct
ENST00000293860.6	MANE_select
ENST00000293861.8	CAGE supported TSS
ENST00000293861.8	MANE_select
ENST00000493672.1	NMD likely if extended
ENST00000417493.1	GENCODE experimental pipeline
ENST00000262316.10	MANE_select
ENST00000428730.5	GENCODE experimental pipeline
ENST00000419764.1	NAGNAG splice site
ENST00000356432.8	MANE_select
ENST00000622194.4	GENCODE experimental pipeline
ENST00000611875.5	MANE_select
ENST00000399953.7	suspected genomic sequencing error affecting CDS in exon 11
ENST00000419636.1	GENCODE experimental pipeline
ENST00000252951.3	MANE_select
ENST00000472539.5	This variant and Z84721.3-002 are identical with the exception of the position of the first exon.  The genomic sequence is identical at both positions and current evidence cannot discriminate which is genuine
ENST00000496585.1	This variant and Z84721.3-003 are identical with the exception of the position of the first exon.  The genomic sequence is identical at both positions and current evidence cannot discriminate which is genuine
ENST00000356815.4	MANE_select
ENST00000251595.11	LR annotation
ENST00000251595.11	MANE_select
ENST00000320868.9	LR annotation
ENST00000320868.9	MANE_select
ENST00000199708.3	MANE_select
ENST00000293872.13	MANE_select
ENST00000428363.1	not organism-supported
ENST00000494545.1	not organism-supported
ENST00000399932.8	MANE_select
ENST00000420500.5	QC splicing correct
ENST00000397770.8	MANE_select
ENST00000435035.5	QC splicing correct
ENST00000447871.5	GENCODE experimental pipeline
ENST00000219409.8	MANE_select
ENST00000219406.11	MANE_select
ENST00000404312.5	GENCODE experimental pipeline
ENST00000435833.1	not organism-supported
ENST00000262320.8	MANE_select
ENST00000199706.13	MANE_select
ENST00000648346.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648346.1	upstream ATG
ENST00000431232.7	MANE_select
ENST00000219479.7	MANE_select
ENST00000219479.7	protein expressed in non-metastatic cells 4
ENST00000219481.10	MANE_select
ENST00000262305.9	MANE_select
ENST00000449879.6	upstream ATG
ENST00000622160.1	CAGE supported TSS
ENST00000219611.7	MANE_select
ENST00000637507.1	downstream ATG
ENST00000409413.4	FLJ13841
ENST00000409413.4	MANE_select
ENST00000293874.2	alternative 5' UTR
ENST00000409527.6	FLJ95129
ENST00000409527.6	alternative 5' UTR
ENST00000439574.1	alternative 5' UTR
ENST00000321878.10	MANE_select
ENST00000443147.5	FLJ55593
ENST00000420990.6	alternative 3' UTR
ENST00000480424.6	FLJ30601
ENST00000476438.1	FLJ34754
ENST00000424439.3	MANE_select
ENST00000424439.3	alternative 5' UTR
ENST00000409439.6	NMD likely if extended
ENST00000635107.1	NMD likely if extended
ENST00000248139.8	MANE_select
ENST00000248139.8	RAR (RAS like GTPASE) like
ENST00000319070.3	MANE_select
ENST00000301686.13	MANE_select
ENST00000307650.9	MANE_select
ENST00000491999.5	novel protein
ENST00000615744.4	CAGE supported TSS
ENST00000455294.1	novel transcript
ENST00000552943.5	NAGNAG splice site
ENST00000549091.5	Human synthetic construct BC172228.1 supports this variant
ENST00000549648.5	NAGNAG splice site
ENST00000293879.9	Human synthetic construct BC172228.1 supports this variant
ENST00000293879.9	MANE_select
ENST00000293879.9	confirm experimentally
ENST00000552648.5	NMD likely if extended
ENST00000548844.1	NMD likely if extended
ENST00000563776.6	Genoscope mRNA only
ENST00000563776.6	non canonical TEC
ENST00000561983.5	Genoscope mRNA only
ENST00000315082.9	MANE_select
ENST00000569943.6	NMD likely if extended
ENST00000352681.8	MANE_select
ENST00000219548.9	MANE_select
ENST00000564370.5	alternative 5' UTR
ENST00000566181.2	NMD likely if extended
ENST00000609261.6	MANE_select
ENST00000562824.5	CAGE supported TSS
ENST00000562111.1	CAGE supported TSS
ENST00000293883.9	DKFZp434F054
ENST00000293883.9	MANE_select
ENST00000647644.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000397621.6	MANE_select
ENST00000568223.7	MANE_select
ENST00000569529.6	MANE_select
ENST00000345165.10	MANE_select
ENST00000389703.8	MANE_select
ENST00000568141.5	alternative 5' UTR
ENST00000647875.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000563156.1	alternative 3' UTR
ENST00000251588.7	MANE_select
ENST00000545450.7	MANE_select
ENST00000382862.7	mesothelin
ENST00000537221.1	not organism-supported
ENST00000007264.7	MANE_select
ENST00000262315.14	MANE_select
ENST00000570058.5	NMD likely if extended
ENST00000440239.5	NAGNAG splice site
ENST00000491530.5	NMD likely if extended
ENST00000461268.5	NMD likely if extended
ENST00000248150.5	MANE_select
ENST00000655150.1	Assembled from SLRseq reads (SRP049776)
ENST00000262301.16	MANE_select
ENST00000662104.1	Assembled from SLRseq reads (SRP049776)
ENST00000655952.1	Assembled from SLRseq reads (SRP049776)
ENST00000669274.1	Assembled from SLRseq reads (SRP049776)
ENST00000293894.4	MANE_select
ENST00000564390.1	QC splicing correct
ENST00000328449.6	MANE_select
ENST00000348261.11	MANE_select
ENST00000348261.11	non canonical U12
ENST00000565831.6	non canonical U12
ENST00000611196.4	would be NMD even where the upstream disablement are absent
ENST00000606293.5	MANE_select
ENST00000561736.2	not best-in-genome evidence
ENST00000338844.8	MANE_select
ENST00000211076.5	MANE_select
ENST00000355803.8	alternative 5' UTR
ENST00000325437.9	alternative 5' UTR
ENST00000397515.6	alternative 5' UTR
ENST00000397514.8	MANE_select
ENST00000567383.6	alternative 5' UTR
ENST00000403747.6	QC splicing correct
ENST00000403747.6	alternative 5' UTR
ENST00000568209.5	NMD likely if extended
ENST00000568209.5	QC splicing correct
ENST00000566587.5	alternative 5' UTR
ENST00000406620.6	alternative 5' UTR
ENST00000567074.6	alternative 5' UTR
ENST00000567074.6	upstream uORF
ENST00000426824.8	MANE_select
ENST00000564213.1	NMD likely if extended
ENST00000007390.3	MANE_select
ENST00000007390.3	novel protein similar to predicted yeast, worm and archae-bacterial proteins
ENST00000204679.9	MANE_select
ENST00000389221.9	CAGE supported TSS
ENST00000389221.9	MANE_select
ENST00000402641.6	alternative 5' UTR
ENST00000442039.3	MANE_select
ENST00000640283.2	CAGE supported TSS
ENST00000640283.2	MANE_select
ENST00000624543.1	confirm experimentally
ENST00000382745.9	MANE_select
ENST00000447419.7	MANE_select
ENST00000440447.2	not organism-supported
ENST00000262319.11	MANE_select
ENST00000563676.1	QC splicing correct
ENST00000426508.7	MANE_select
ENST00000569646.5	alternative 5' UTR
ENST00000569812.1	alternative 5' UTR
ENST00000566264.2	MANE_select
ENST00000566264.2	alternative 5' UTR
ENST00000623365.1	confirm experimentally
ENST00000624488.1	confirm experimentally
ENST00000623878.1	confirm experimentally
ENST00000674071.1	alternative 5' UTR
ENST00000397412.8	CAGE supported TSS
ENST00000397412.8	MANE_select
ENST00000248098.8	MANE_select
ENST00000566691.5	alternative 5' UTR
ENST00000565851.5	alternative 5' UTR
ENST00000624137.1	confirm experimentally
ENST00000356010.9	NP_001035529
ENST00000610761.2	CAGE supported TSS
ENST00000610761.2	MANE_select
ENST00000610761.2	NAGNAG splice site
ENST00000564628.1	alternative 5' UTR
ENST00000563498.1	alternative 5' UTR
ENST00000563854.1	QC splicing correct
ENST00000397375.7	MANE_select
ENST00000566339.6	MANE_select
ENST00000301717.8	alternative 5' UTR
ENST00000262302.14	MANE_select
ENST00000564227.5	alternative 5' UTR
ENST00000562263.5	alternative 5' UTR
ENST00000215539.4	CAGE supported TSS
ENST00000215539.4	MANE_select
ENST00000415638.3	NP_001139478
ENST00000564445.5	alternative 3' UTR
ENST00000566644.5	alternative 3' UTR
ENST00000397356.8	MANE_select
ENST00000569339.1	alternative 5' UTR
ENST00000382666.5	NP_001018114
ENST00000325962.9	MANE_select
ENST00000496541.6	alternative 5' UTR
ENST00000454677.3	MANE_select
ENST00000454677.3	upstream ATG
ENST00000361871.8	MANE_select
ENST00000268661.8	MANE_select
ENST00000268668.11	MANE_select
ENST00000343262.9	DKFZp667P2125
ENST00000343262.9	MANE_select
ENST00000527302.1	alternative 5' UTR
ENST00000531523.1	CAGE supported TSS
ENST00000569714.6	MANE_select
ENST00000618631.1	CAGE supported TSS
ENST00000568546.6	MANE_select
ENST00000356120.9	MANE_select
ENST00000354249.8	NAGNAG splice site
ENST00000566005.5	NAGNAG splice site
ENST00000567471.1	alternative 5' UTR
ENST00000248114.7	MANE_select
ENST00000569451.1	QC splicing correct
ENST00000654451.1	Assembled from SLRseq reads (SRP049776)
ENST00000654335.1	Assembled from SLRseq reads (SRP049776)
ENST00000248121.7	MANE_select
ENST00000566435.4	GeneRIF: a non-AUG translation initiation site is used to express mouse prepro-Npw (PUBMED  12719537)
ENST00000566435.4	MANE_select
ENST00000424542.7	MANE_select
ENST00000651522.1	NAGNAG splice site
ENST00000566380.5	NAGNAG splice site
ENST00000651570.2	CAGE supported TSS
ENST00000651570.2	LR annotation
ENST00000651570.2	MANE_select
ENST00000643088.1	NAGNAG splice site
ENST00000219476.9	MANE_select
ENST00000219476.9	upstream ATG
ENST00000642936.1	NAGNAG splice site
ENST00000401874.7	NAGNAG splice site
ENST00000644329.1	NAGNAG splice site
ENST00000439117.6	NAGNAG splice site
ENST00000568454.6	NAGNAG splice site
ENST00000568454.6	NP_001305761.1
ENST00000644399.1	NAGNAG splice site
ENST00000642365.1	NAGNAG splice site
ENST00000483020.5	alternative 3' UTR
ENST00000471143.6	NAGNAG splice site
ENST00000497886.5	FLJ43106
ENST00000642728.1	NMD likely if extended
ENST00000262304.9	MANE_select
ENST00000423118.5	NAGNAG splice site
ENST00000567946.1	NMD likely if extended
ENST00000483731.5	QC splicing correct
ENST00000496574.6	QC splicing correct
ENST00000561991.5	QC splicing correct
ENST00000568591.5	QC splicing correct
ENST00000483024.1	NMD likely if extended
ENST00000483024.1	QC splicing correct
ENST00000488185.2	NMD likely if extended
ENST00000570150.1	NMD likely if extended
ENST00000210187.11	MANE_select
ENST00000326181.11	MANE_select
ENST00000567645.2	alternative 5' UTR
ENST00000343516.8	MANE_select
ENST00000563179.5	alternative 5' UTR
ENST00000569457.5	alternative 5' UTR
ENST00000564088.5	alternative 5' UTR
ENST00000382450.8	NAGNAG splice site
ENST00000569417.6	MANE_select
ENST00000566835.5	upstream uORF
ENST00000397124.5	alternative 5' UTR
ENST00000565250.1	alternative 5' UTR
ENST00000565250.1	upstream uORF
ENST00000333503.8	MANE_select
ENST00000301727.9	MANE_select
ENST00000320700.10	MANE_select
ENST00000320700.10	alternative 5' UTR
ENST00000567494.5	alternative 5' UTR
ENST00000301729.9	MANE_select
ENST00000566379.1	alternative 5' UTR
ENST00000397086.6	alternative 5' UTR
ENST00000320225.10	MANE_select
ENST00000566397.5	alternative 5' UTR
ENST00000565678.5	alternative 5' UTR
ENST00000568631.5	alternative 5' UTR
ENST00000301730.12	alternative 5' UTR
ENST00000301730.12	non canonical conserved
ENST00000565870.5	alternative 5' UTR
ENST00000561518.5	alternative 5' UTR
ENST00000564601.5	alternative 5' UTR
ENST00000564764.5	alternative 5' UTR
ENST00000566180.5	alternative 5' UTR
ENST00000562690.5	alternative 5' UTR
ENST00000565333.5	alternative 5' UTR
ENST00000565589.5	alternative 5' UTR
ENST00000564822.1	alternative 5' UTR
ENST00000564822.1	non canonical conserved
ENST00000301732.10	MANE_select
ENST00000397066.9	MANE_select
ENST00000648756.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000361837.9	MANE_select
ENST00000293973.2	MANE_select
ENST00000646147.1	CAGE supported TSS
ENST00000646147.1	LR annotation
ENST00000646147.1	MANE_select
ENST00000562105.2	alternative 5' UTR
ENST00000643767.1	alternative 5' UTR
ENST00000627285.1	alternative 5' UTR
ENST00000330398.9	MANE_select
ENST00000565223.1	alternative 5' UTR
ENST00000564973.1	alternative 5' UTR
ENST00000624099.1	confirm experimentally
ENST00000293971.11	MANE_select
ENST00000413459.7	NP_001139287
ENST00000648227.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000567119.1	MANE_select
ENST00000268673.11	NP_112558
ENST00000342085.9	MANE_select
ENST00000461815.1	alternative 5' UTR
ENST00000568040.1	not best-in-genome evidence
ENST00000624961.1	confirm experimentally
ENST00000625130.1	confirm experimentally
ENST00000624546.1	confirm experimentally
ENST00000624558.1	confirm experimentally
ENST00000564340.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663379.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655820.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661984.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658381.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658381.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000662175.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665388.1	Assembled from SLRseq reads (SRP049776)
ENST00000656684.1	Assembled from SLRseq reads (SRP049776)
ENST00000568395.2	Assembled from SLRseq reads (SRP049776)
ENST00000667008.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667008.1	Assembled from SLRseq reads (SRP049776)
ENST00000660569.1	Assembled from SLRseq reads (SRP049776)
ENST00000669589.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669589.1	Assembled from SLRseq reads (SRP049776)
ENST00000663519.1	Assembled from SLRseq reads (SRP049776)
ENST00000654949.1	Assembled from SLRseq reads (SRP049776)
ENST00000662929.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662929.1	Assembled from SLRseq reads (SRP049776)
ENST00000670385.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670385.1	Assembled from SLRseq reads (SRP049776)
ENST00000654702.1	Assembled from SLRseq reads (SRP049776)
ENST00000661380.1	Assembled from SLRseq reads (SRP049776)
ENST00000657531.1	Assembled from SLRseq reads (SRP049776)
ENST00000658483.1	Assembled from SLRseq reads (SRP049776)
ENST00000661849.1	Assembled from SLRseq reads (SRP049776)
ENST00000666404.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666404.1	Assembled from SLRseq reads (SRP049776)
ENST00000659184.1	Assembled from SLRseq reads (SRP049776)
ENST00000659274.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659274.1	Assembled from SLRseq reads (SRP049776)
ENST00000668411.1	Assembled from SLRseq reads (SRP049776)
ENST00000669151.1	Assembled from SLRseq reads (SRP049776)
ENST00000657811.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657811.1	Assembled from SLRseq reads (SRP049776)
ENST00000671507.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668680.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666266.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671475.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665778.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653956.1	Assembled from SLRseq reads (SRP049776)
ENST00000562807.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667109.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665678.1	Assembled from SLRseq reads (SRP049776)
ENST00000662943.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657292.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000566343.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671018.1	Assembled from SLRseq reads (SRP049776)
ENST00000301738.9	MANE_select
ENST00000564246.1	NMD likely if extended
ENST00000623937.1	confirm experimentally
ENST00000302641.8	MANE_select
ENST00000565903.5	alternative 3' UTR
ENST00000565903.5	alternative 5' UTR
ENST00000667280.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000576924.5	alternative 5' UTR
ENST00000301740.13	MANE_select
ENST00000576415.5	alternative 5' UTR
ENST00000571378.5	alternative 5' UTR
ENST00000574340.1	alternative 5' UTR
ENST00000573583.2	QC splicing correct
ENST00000262306.11	NP_996896.1
ENST00000409906.9	MANE_select
ENST00000621230.1	CAGE supported TSS
ENST00000293851.9	alternative 5' UTR
ENST00000576886.5	upstream uORF
ENST00000005995.8	MANE_select
ENST00000574813.5	NAGNAG splice site
ENST00000577043.1	NAGNAG splice site
ENST00000574265.1	NAGNAG splice site
ENST00000572863.1	CAGE supported TSS
ENST00000506153.5	locus is a unitary pseudogene
ENST00000659874.1	Assembled from SLRseq reads (SRP049776)
ENST00000161006.8	MANE_select
ENST00000577140.1	QC splicing correct
ENST00000662388.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659109.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000293981.10	alternative 5' UTR
ENST00000396958.8	MANE_select
ENST00000573965.1	alternative 5' UTR
ENST00000253928.14	MANE_select
ENST00000416288.6	NAGNAG splice site
ENST00000570425.5	alternative 5' UTR
ENST00000573525.1	alternative 5' UTR
ENST00000303746.10	MANE_select
ENST00000262300.13	MANE_select
ENST00000573944.5	alternative 5' UTR
ENST00000576268.1	alternative 5' UTR
ENST00000574415.5	QC splicing correct
ENST00000575632.5	alternative 5' UTR
ENST00000572059.1	alternative 5' UTR
ENST00000572619.1	alternative 5' UTR
ENST00000576565.1	alternative 5' UTR
ENST00000318782.9	DKFZp547C0916
ENST00000318782.9	MANE_select
ENST00000621689.1	CAGE supported TSS
ENST00000573315.2	CAGE supported TSS
ENST00000573315.2	confirm experimentally
ENST00000573465.5	QC splicing correct
ENST00000445369.3	MANE_select
ENST00000328796.5	MANE_select
ENST00000328796.5	genebuild_only_MANE
ENST00000326577.9	MANE_select
ENST00000575836.1	NMD likely if extended
ENST00000248089.8	MANE_select
ENST00000574980.5	alternative 5' UTR
ENST00000573842.1	alternative 5' UTR
ENST00000326266.13	MANE_select
ENST00000574549.5	NAGNAG splice site
ENST00000575576.5	NAGNAG splice site
ENST00000575576.5	alternative 5' UTR
ENST00000572449.6	MANE_select
ENST00000576250.6	Assembled from SLRseq reads (SRP049776)
ENST00000649784.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000572574.5	CAGE supported TSS
ENST00000336577.9	MANE_select
ENST00000526464.6	alternative 5' UTR
ENST00000440815.7	NAGNAG splice site
ENST00000440815.7	alternative 5' UTR
ENST00000529550.5	alternative 5' UTR
ENST00000551122.5	NAGNAG splice site
ENST00000551122.5	alternative 5' UTR
ENST00000548807.5	NAGNAG splice site
ENST00000548807.5	alternative 5' UTR
ENST00000528163.6	alternative 5' UTR
ENST00000530890.5	alternative 5' UTR
ENST00000444393.7	alternative 5' UTR
ENST00000533097.6	alternative 5' UTR
ENST00000008180.13	NP_001012652
ENST00000396890.6	alternative 5' UTR
ENST00000525643.7	MANE_select
ENST00000525643.7	alternative 5' UTR
ENST00000548652.5	NP_001012654.1
ENST00000530538.6	NAGNAG splice site
ENST00000530538.6	alternative 5' UTR
ENST00000549213.5	alternative 5' UTR
ENST00000548476.5	alternative 5' UTR
ENST00000552664.5	NAGNAG splice site
ENST00000552664.5	alternative 5' UTR
ENST00000552356.5	alternative 5' UTR
ENST00000577123.5	QC splicing correct
ENST00000571404.5	CAGE supported TSS
ENST00000571404.5	QC splicing correct
ENST00000665606.1	Assembled from SLRseq reads (SRP049776)
ENST00000576985.6	MANE_select
ENST00000572431.1	alternative 5' UTR
ENST00000572548.1	upstream ATG
ENST00000576483.1	alternative 5' UTR
ENST00000573931.1	QC splicing correct
ENST00000664624.1	Assembled from SLRseq reads (SRP049776)
ENST00000670666.1	Assembled from SLRseq reads (SRP049776)
ENST00000653667.1	Assembled from SLRseq reads (SRP049776)
ENST00000668823.1	Assembled from SLRseq reads (SRP049776)
ENST00000657996.1	Assembled from SLRseq reads (SRP049776)
ENST00000657201.1	Assembled from SLRseq reads (SRP049776)
ENST00000668778.1	Assembled from SLRseq reads (SRP049776)
ENST00000654387.1	Assembled from SLRseq reads (SRP049776)
ENST00000659227.1	Assembled from SLRseq reads (SRP049776)
ENST00000570901.2	Assembled from SLRseq reads (SRP049776)
ENST00000654482.1	Assembled from SLRseq reads (SRP049776)
ENST00000653148.1	Assembled from SLRseq reads (SRP049776)
ENST00000658602.1	Assembled from SLRseq reads (SRP049776)
ENST00000652946.1	Assembled from SLRseq reads (SRP049776)
ENST00000571449.2	Assembled from SLRseq reads (SRP049776)
ENST00000573447.2	Assembled from SLRseq reads (SRP049776)
ENST00000577163.1	QC splicing correct
ENST00000671396.1	Assembled from SLRseq reads (SRP049776)
ENST00000576590.2	Assembled from SLRseq reads (SRP049776)
ENST00000219091.9	MANE_select
ENST00000219091.9	alternative 5' UTR
ENST00000444510.6	alternative 5' UTR
ENST00000414351.5	alternative 5' UTR
ENST00000573771.1	alternative 5' UTR
ENST00000574902.5	alternative 5' UTR
ENST00000396878.8	MANE_select
ENST00000576416.5	alternative 5' UTR
ENST00000652759.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000652759.1	NAGNAG splice site
ENST00000414144.7	MANE_select
ENST00000396868.7	NAGNAG splice site
ENST00000396871.8	NAGNAG splice site
ENST00000396871.8	NP_001138918
ENST00000431561.7	alternative 5' UTR
ENST00000396870.8	NAGNAG splice site
ENST00000396870.8	alternative 5' UTR
ENST00000575948.1	NAGNAG splice site
ENST00000575617.1	alternative 5' UTR
ENST00000219596.6	MANE_select
ENST00000339854.8	QC splicing correct
ENST00000339854.8	confirm experimentally
ENST00000536980.5	QC splicing correct
ENST00000537682.5	QC splicing correct
ENST00000538326.5	QC splicing correct
ENST00000542898.5	QC splicing correct
ENST00000536379.5	confirm experimentally
ENST00000219069.6	MANE_select
ENST00000396862.2	MANE_select
ENST00000573608.1	alternative 5' UTR
ENST00000574298.6	DKFZp686A1965
ENST00000669516.2	MANE_select
ENST00000572999.5	alternative 5' UTR
ENST00000304936.4	MANE_select
ENST00000399974.5	MANE_select
ENST00000399974.5	not best-in-genome evidence
ENST00000396852.9	MANE_select
ENST00000439568.2	alternative 5' UTR
ENST00000575350.2	alternative 5' UTR
ENST00000268655.5	MANE_select
ENST00000575752.5	alternative 5' UTR
ENST00000571936.5	alternative 5' UTR
ENST00000301744.7	MANE_select
ENST00000572757.5	alternative 5' UTR
ENST00000573593.5	alternative 5' UTR
ENST00000570372.5	alternative 5' UTR
ENST00000575936.5	NMD likely if extended
ENST00000407558.9	MANE_select
ENST00000407558.9	NMD exception
ENST00000407558.9	non canonical U12
ENST00000424546.6	NMD exception
ENST00000424546.6	non canonical U12
ENST00000575733.5	alternative 5' UTR
ENST00000649205.1	alternative 5' UTR
ENST00000574950.5	alternative 5' UTR
ENST00000573580.5	alternative 5' UTR
ENST00000573580.5	non canonical U12
ENST00000573580.5	upstream ATG
ENST00000574328.5	alternative 5' UTR
ENST00000421765.7	NMD exception
ENST00000360862.9	NMD exception
ENST00000360862.9	non canonical U12
ENST00000414063.6	NMD exception
ENST00000414063.6	alternative 5' UTR
ENST00000414063.6	non canonical U12
ENST00000572739.5	non canonical U12
ENST00000576787.5	alternative 5' UTR
ENST00000573345.5	non canonical U12
ENST00000570551.5	non canonical U12
ENST00000572942.5	NMD exception
ENST00000575076.5	NMD exception
ENST00000575076.5	alternative 3' UTR
ENST00000572131.5	alternative 5' UTR
ENST00000570819.5	NMD exception
ENST00000575754.1	non canonical U12
ENST00000437192.8	MANE_select
ENST00000576634.6	MANE_select
ENST00000574551.1	alternative 5' UTR
ENST00000359128.10	MANE_select
ENST00000603055.1	NMD likely if extended
ENST00000294008.4	MANE_select
ENST00000486524.1	FLJ16318
ENST00000407479.5	alternative 5' UTR
ENST00000575479.1	alternative 3' UTR
ENST00000246957.10	MANE_select
ENST00000573872.5	NMD likely if extended
ENST00000576335.5	QC splicing correct
ENST00000571011.1	QC splicing correct
ENST00000262367.10	MANE_select
ENST00000382070.7	NP_001073315.1
ENST00000571302.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649221.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000657721.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000294016.8	MANE_select
ENST00000399609.7	MANE_select
ENST00000204517.11	MANE_select
ENST00000433375.2	CAGE supported TSS
ENST00000433375.2	MANE_select
ENST00000433375.2	alternative 5' UTR
ENST00000573553.5	alternative 5' UTR
ENST00000318059.8	MANE_select
ENST00000576217.1	alternative 5' UTR
ENST00000572467.5	NP_001188408
ENST00000251166.9	MANE_select
ENST00000574025.5	NP_001188402
ENST00000571052.5	alternative 5' UTR
ENST00000575038.5	alternative 5' UTR
ENST00000576051.5	alternative 5' UTR
ENST00000573165.1	alternative 5' UTR
ENST00000304735.4	MANE_select
ENST00000262375.11	MANE_select
ENST00000574733.5	alternative 5' UTR
ENST00000404295.7	alternative 5' UTR
ENST00000283429.11	MANE_select
ENST00000574425.5	alternative 5' UTR
ENST00000575051.5	alternative 5' UTR
ENST00000458134.7	alternative 5' UTR
ENST00000219700.10	alternative 5' UTR
ENST00000570646.6	MANE_select
ENST00000572812.5	alternative 5' UTR
ENST00000574466.5	alternative 5' UTR
ENST00000576827.5	alternative 5' UTR
ENST00000570445.5	alternative 5' UTR
ENST00000575129.5	alternative 5' UTR
ENST00000398595.7	alternative 5' UTR
ENST00000567695.6	MANE_select
ENST00000563332.6	alternative 5' UTR
ENST00000399599.7	alternative 5' UTR
ENST00000589890.1	not organism-supported
ENST00000444310.4	not organism-supported
ENST00000283474.12	MANE_select
ENST00000262370.12	MANE_select
ENST00000590790.5	NAGNAG splice site
ENST00000590790.5	upstream uORF
ENST00000586536.1	not organism-supported
ENST00000304283.9	MANE_select
ENST00000590193.5	alternative 5' UTR
ENST00000588513.1	not organism-supported
ENST00000586724.5	alternative 5' UTR
ENST00000590191.1	not organism-supported
ENST00000299320.10	MANE_select
ENST00000219478.11	MANE_select
ENST00000268231.13	MANE_select
ENST00000591624.1	alternative 5' UTR
ENST00000649556.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000586005.6	MANE_select
ENST00000322048.12	DKFZp564M1672
ENST00000322048.12	MANE_select
ENST00000321919.14	MANE_select
ENST00000262376.11	MANE_select
ENST00000396658.8	alternative 5' UTR
ENST00000345988.7	MANE_select
ENST00000251170.12	MANE_select
ENST00000587469.1	alternative 5' UTR
ENST00000381955.7	confirm experimentally
ENST00000312251.8	MANE_select
ENST00000649828.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000650085.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000262374.10	MANE_select
ENST00000544428.1	upstream uORF
ENST00000472572.8	MANE_select
ENST00000472572.8	upstream ATG
ENST00000474471.7	non canonical TEC
ENST00000315997.5	upstream ATG
ENST00000427587.9	MANE_select
ENST00000587200.1	not organism-supported
ENST00000663131.1	Assembled from SLRseq reads (SRP049776)
ENST00000650622.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000660079.1	Assembled from SLRseq reads (SRP049776)
ENST00000566684.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000550418.6	MANE_select
ENST00000547605.5	NAGNAG splice site
ENST00000675725.1	CAGE supported TSS
ENST00000674859.1	CAGE supported TSS
ENST00000675077.1	CAGE supported TSS
ENST00000675242.1	CAGE supported TSS
ENST00000662976.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000566218.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656878.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653860.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000561572.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665170.1	Assembled from SLRseq reads (SRP049776)
ENST00000661083.1	Assembled from SLRseq reads (SRP049776)
ENST00000670665.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654046.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000567103.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000624696.1	NP_001277024.1
ENST00000655833.1	Assembled from SLRseq reads (SRP049776)
ENST00000563958.5	alternative 5' UTR
ENST00000381920.8	MANE_select
ENST00000564554.1	alternative 5' UTR
ENST00000268251.13	DKFZp686E1693
ENST00000268251.13	MANE_select
ENST00000568847.5	alternative 5' UTR
ENST00000561870.5	alternative 5' UTR
ENST00000425191.6	alternative 5' UTR
ENST00000333050.7	MANE_select
ENST00000268261.9	MANE_select
ENST00000311052.10	MANE_select
ENST00000311052.10	alternative 5' UTR
ENST00000561530.5	alternative 5' UTR
ENST00000567554.5	alternative 5' UTR
ENST00000565287.5	alternative 5' UTR
ENST00000567908.5	alternative 5' UTR
ENST00000570125.5	alternative 5' UTR
ENST00000568117.5	alternative 5' UTR
ENST00000569398.5	alternative 5' UTR
ENST00000567626.1	NMD likely if extended
ENST00000636296.1	alternative 5' UTR
ENST00000637237.1	CAGE supported TSS
ENST00000637237.1	alternative 5' UTR
ENST00000344836.9	MANE_select
ENST00000673704.1	CAGE supported TSS
ENST00000563043.1	not organism-supported
ENST00000567692.1	not organism-supported
ENST00000327827.12	MANE_select
ENST00000574616.2	CAGE supported TSS
ENST00000667976.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664064.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659361.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658945.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652999.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663435.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660678.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663910.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667033.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665919.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659300.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659212.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665404.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657081.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664399.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666769.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660662.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653539.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654659.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657043.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661227.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658002.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659345.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671144.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653393.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000634367.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000330684.4	MANE_select
ENST00000330684.4	alternative 5' UTR
ENST00000535259.6	align_id:3603776|asmbl_93941
ENST00000675398.1	align_id:3603779|asmbl_93944
ENST00000676032.1	align_id:3603784|asmbl_93949
ENST00000636406.1	alternative 5' UTR
ENST00000637188.1	alternative 5' UTR
ENST00000653203.1	Assembled from SLRseq reads (SRP049776)
ENST00000649384.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000562102.5	alternative 5' UTR
ENST00000569939.5	alternative 5' UTR
ENST00000569900.5	alternative 5' UTR
ENST00000359543.8	MANE_select
ENST00000536829.1	alternative 5' UTR
ENST00000283025.7	MANE_select
ENST00000283027.10	MANE_select
ENST00000649981.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000299866.13	MANE_select
ENST00000572428.5	alternative 3' UTR
ENST00000570692.1	NMD likely if extended
ENST00000637439.1	upstream ATG
ENST00000324288.14	CAGE supported TSS
ENST00000324288.14	MANE_select
ENST00000537380.1	NMD likely if extended
ENST00000469379.5	NMD exception
ENST00000469379.5	alternative 3' UTR
ENST00000331808.5	MANE_select
ENST00000331808.5	NMD exception
ENST00000409790.6	MANE_select
ENST00000261657.5	Not made as NMD as the stop codon is only 48 bp from the end of the exon. Sw:Q2KHT3-3.2 seems to be assigned to the cDNA used to build this object. I am not convinced this is correct
ENST00000667071.1	Assembled from SLRseq reads (SRP049776)
ENST00000312499.6	MANE_select
ENST00000332029.3	LR annotation
ENST00000312693.4	MANE_select
ENST00000327157.4	MANE_select
ENST00000241808.9	MANE_select
ENST00000312511.4	MANE_select
ENST00000653530.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000600548.1	gene fragments CTD-3088G3.5, CTD-3088G3.3 and CTD-3088G3.2 are part of the same gene; the exact exon structure linking the fragments is yet to be determined
ENST00000600877.1	gene fragments CTD-3088G3.5, CTD-3088G3.3 and CTD-3088G3.2 are part of the same gene; the exact exon structure linking the fragments is yet to be determined
ENST00000622633.5	MANE_select
ENST00000622633.5	alternative 5' UTR
ENST00000339430.9	alternative 5' UTR
ENST00000570904.5	alternative 5' UTR
ENST00000576036.5	alternative 5' UTR
ENST00000574763.5	alternative 5' UTR
ENST00000571627.5	alternative 5' UTR
ENST00000570798.5	alternative 5' UTR
ENST00000574701.5	alternative 5' UTR
ENST00000574848.5	downstream ATG
ENST00000571277.1	alternative 5' UTR
ENST00000576334.1	downstream ATG
ENST00000329565.6	MANE_select
ENST00000283033.10	MANE_select
ENST00000573174.1	NMD likely if extended
ENST00000396516.6	alternative 5' UTR
ENST00000355758.9	MANE_select
ENST00000572870.5	alternative 5' UTR
ENST00000576018.5	alternative 5' UTR
ENST00000572781.5	alternative 5' UTR
ENST00000574995.1	alternative 5' UTR
ENST00000615722.1	CAGE supported TSS
ENST00000571133.6	MANE_select
ENST00000355674.9	NAGNAG splice site
ENST00000434724.7	MANE_select
ENST00000673243.1	alternative 5' UTR
ENST00000399147.8	LOC729978
ENST00000399147.8	confirm experimentally
ENST00000053243.6	MANE_select
ENST00000566228.6	MANE_select
ENST00000381774.9	MANE_select
ENST00000558583.3	FLJ58277
ENST00000558583.3	MANE_select
ENST00000423335.2	FLJ99079, DKFZp686D24206
ENST00000662907.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653029.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655174.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000574540.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655361.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669271.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665873.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659657.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000311895.8	MANE_select
ENST00000462862.1	DNA-repair protein complementing XP-F cell (Xeroderma pigmentosum group F complementing protein) (DNA excision repair protein ERCC-4)
ENST00000668908.1	Assembled from SLRseq reads (SRP049776)
ENST00000654412.1	Assembled from SLRseq reads (SRP049776)
ENST00000575424.2	Assembled from SLRseq reads (SRP049776)
ENST00000662675.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000571589.6	MANE_select
ENST00000574998.5	alternative 5' UTR
ENST00000575537.5	NMD likely if extended
ENST00000575833.1	NMD likely if extended
ENST00000668516.1	Assembled from SLRseq reads (SRP049776)
ENST00000657105.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647822.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000656661.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000437198.7	CAGE supported TSS
ENST00000437198.7	LR annotation
ENST00000437198.7	MANE_select
ENST00000651913.1	NAGNAG splice site
ENST00000563697.5	NMD likely if extended
ENST00000566021.1	NMD likely if extended
ENST00000562121.1	NMD likely if extended
ENST00000261658.7	MANE_select
ENST00000570219.1	alternative 5' UTR
ENST00000438167.8	MANE_select
ENST00000552140.5	not best-in-genome evidence
ENST00000553201.1	not best-in-genome evidence
ENST00000287667.12	MANE_select
ENST00000565655.1	alternative 3' UTR
ENST00000328085.10	MANE_select
ENST00000396410.9	MANE_select
ENST00000566426.1	alternative 5' UTR
ENST00000567306.5	alternative 5' UTR
ENST00000287706.8	MANE_select
ENST00000198767.11	MANE_select
ENST00000360151.9	MANE_select
ENST00000360151.9	not best-in-genome evidence
ENST00000396385.4	MANE_select
ENST00000300006.9	MANE_select
ENST00000396368.8	MANE_select
ENST00000551742.5	alternative 5' UTR
ENST00000549219.1	alternative 5' UTR
ENST00000674888.1	upstream ATG
ENST00000396354.6	MANE_select
ENST00000396354.6	alternative 5' UTR
ENST00000570727.5	alternative 5' UTR
ENST00000300036.6	CAGE supported TSS
ENST00000300036.6	LR annotation
ENST00000300036.6	MANE_select
ENST00000452625.7	CAGE supported TSS
ENST00000452625.7	LR annotation
ENST00000576790.7	QC splicing correct
ENST00000255759.11	C16orf63
ENST00000255759.11	MANE_select
ENST00000574224.2	align_id:3604523|asmbl_94688
ENST00000572882.3	PLAR_transcripts
ENST00000678422.1	PLAR_transcripts
ENST00000399410.8	MANE_select
ENST00000679043.1	NMD likely if extended
ENST00000205557.12	CAGE supported TSS
ENST00000205557.12	MANE_select
ENST00000399336.9	MANE_select
ENST00000677777.1	alternative 3' UTR
ENST00000677781.1	alternative 3' UTR
ENST00000537112.5	non canonical TEC
ENST00000567465.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660246.1	Assembled from SLRseq reads (SRP049776)
ENST00000261381.7	MANE_select
ENST00000666883.1	Assembled from SLRseq reads (SRP049776)
ENST00000648074.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648391.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000322989.8	MANE_select
ENST00000563390.5	alternative 5' UTR
ENST00000565420.5	alternative 5' UTR
ENST00000304414.12	MANE_select
ENST00000304381.10	MANE_select
ENST00000666887.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000576433.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000321998.10	MANE_select
ENST00000568985.5	alternative 3' UTR
ENST00000561858.5	alternative 5' UTR
ENST00000568032.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000381440.5	MANE_select
ENST00000355377.7	MANE_select
ENST00000666855.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000636231.2	MANE_select
ENST00000648468.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000542583.7	MANE_select
ENST00000353258.8	MANE_select
ENST00000565376.2	alternative 5' UTR
ENST00000438132.7	NP_064710.4
ENST00000417362.7	CAGE supported TSS
ENST00000417362.7	MANE_select
ENST00000567245.5	NMD likely if extended
ENST00000219837.12	MANE_select
ENST00000564480.1	alternative 5' UTR
ENST00000561839.5	NMD likely if extended
ENST00000300571.7	MANE_select
ENST00000569479.5	alternative 5' UTR
ENST00000569847.1	alternative 5' UTR
ENST00000566822.1	alternative 5' UTR
ENST00000562469.5	alternative 5' UTR
ENST00000568214.1	alternative 5' UTR
ENST00000570142.5	alternative 5' UTR
ENST00000564449.1	alternative 5' UTR
ENST00000570682.2	MANE_select
ENST00000302555.10	MANE_select
ENST00000381360.9	upstream ATG
ENST00000575582.5	alternative 5' UTR
ENST00000575730.1	NMD likely if extended
ENST00000396138.9	CAGE supported TSS
ENST00000396138.9	MANE_select
ENST00000396134.6	non canonical conserved
ENST00000571174.5	alternative 5' UTR
ENST00000577168.2	upstream ATG
ENST00000576688.2	alternative 5' UTR
ENST00000576688.2	upstream uORF
ENST00000570757.5	alternative 5' UTR
ENST00000576546.1	alternative 5' UTR
ENST00000570972.2	alternative 5' UTR
ENST00000302451.9	MANE_select
ENST00000575561.1	not organism-supported
ENST00000331849.8	MANE_select
ENST00000573854.6	MANE_select
ENST00000576361.5	alternative 5' UTR
ENST00000219054.10	alternative 5' UTR
ENST00000575690.5	alternative 5' UTR
ENST00000575690.5	upstream uORF
ENST00000571894.1	alternative 5' UTR
ENST00000329697.10	MANE_select
ENST00000565232.5	alternative 5' UTR
ENST00000567001.5	alternative 5' UTR
ENST00000566384.5	alternative 5' UTR
ENST00000569344.5	alternative 5' UTR
ENST00000568235.5	alternative 5' UTR
ENST00000501740.6	alternative 5' UTR
ENST00000561584.5	alternative 5' UTR
ENST00000564701.1	alternative 5' UTR
ENST00000289416.10	MANE_select
ENST00000561795.5	alternative 5' UTR
ENST00000520010.5	alternative 5' UTR
ENST00000523065.1	alternative 5' UTR
ENST00000396083.7	MANE_select
ENST00000396083.7	alternative 3' UTR
ENST00000381337.6	DKFZp686C1054
ENST00000357967.9	MANE_select
ENST00000357967.9	genebuild_only_MANE
ENST00000568894.5	alternative 5' UTR
ENST00000568046.5	alternative 5' UTR
ENST00000261377.11	MANE_select
ENST00000568476.5	NMD likely if extended
ENST00000568647.5	alternative 5' UTR
ENST00000564274.5	alternative 5' UTR
ENST00000563068.1	alternative 5' UTR
ENST00000567297.5	NMD likely if extended
ENST00000324344.9	DKFZp686O0290
ENST00000324344.9	MANE_select
ENST00000563934.1	alternative 5' UTR
ENST00000568663.5	alternative 5' UTR
ENST00000569023.5	alternative 5' UTR
ENST00000567954.6	MANE_select
ENST00000567954.6	alternative 5' UTR
ENST00000261383.3	DKFZp434N074
ENST00000233047.9	MANE_select
ENST00000261388.7	alternative 5' UTR
ENST00000572599.5	alternative 5' UTR
ENST00000574091.6	MANE_select
ENST00000311620.7	MANE_select
ENST00000572914.2	CAGE supported TSS
ENST00000572914.2	MANE_select
ENST00000572914.2	alternative 5' UTR
ENST00000571358.1	alternative 5' UTR
ENST00000534903.1	alternative 5' UTR
ENST00000654954.1	Assembled from SLRseq reads (SRP049776)
ENST00000358154.8	MANE_select
ENST00000268389.6	MANE_select
ENST00000646100.2	MANE_select
ENST00000341400.11	alternative 5' UTR
ENST00000544693.5	alternative 5' UTR
ENST00000268379.9	MANE_select
ENST00000424898.3	MANE_select
ENST00000612618.1	CAGE supported TSS
ENST00000542527.7	MANE_select
ENST00000568603.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000389398.10	MANE_select
ENST00000659141.1	Assembled from SLRseq reads (SRP049776)
ENST00000263026.10	MANE_select
ENST00000299853.10	MANE_select
ENST00000564883.5	alternative 5' UTR
ENST00000667915.1	Assembled from SLRseq reads (SRP049776)
ENST00000268383.7	MANE_select
ENST00000543407.1	alternative 5' UTR
ENST00000356156.3	alternative 5' UTR
ENST00000541154.1	alternative 5' UTR
ENST00000536620.1	alternative 5' UTR
ENST00000538606.1	alternative 5' UTR
ENST00000517539.1	alternative 5' UTR
ENST00000528249.1	alternative 5' UTR
ENST00000261374.4	MANE_select
ENST00000669554.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660531.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669784.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656295.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648673.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000300061.3	MANE_select
ENST00000343070.7	MANE_select
ENST00000307149.10	MANE_select
ENST00000656451.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000309859.8	MANE_select
ENST00000449606.7	CAGE supported TSS
ENST00000449606.7	LR annotation
ENST00000449606.7	MANE_select
ENST00000563232.1	NMD exception
ENST00000561859.5	NMD likely if extended
ENST00000395878.8	MANE_select
ENST00000007516.8	MANE_select
ENST00000570319.5	alternative 3' UTR
ENST00000261584.9	MANE_select
ENST00000300087.7	MANE_select
ENST00000300093.9	MANE_select
ENST00000256797.9	MANE_select
ENST00000256797.9	upstream ATG
ENST00000457008.6	CAGE supported TSS
ENST00000562562.1	CAGE supported TSS
ENST00000569903.1	CAGE supported TSS
ENST00000300113.3	MANE_select
ENST00000321728.12	CAGE supported TSS
ENST00000321728.12	LR annotation
ENST00000643927.1	LR annotation
ENST00000643927.1	MANE_select
ENST00000482000.2	NMD likely if extended
ENST00000005284.4	MANE_select
ENST00000567686.5	alternative 5' UTR
ENST00000568015.5	alternative 5' UTR
ENST00000319715.10	CAGE supported TSS
ENST00000319715.10	LR annotation
ENST00000319715.10	MANE_select
ENST00000395799.8	MANE_select
ENST00000569520.5	alternative 5' UTR
ENST00000289968.11	MANE_select
ENST00000571480.5	NAGNAG splice site
ENST00000619106.1	CAGE supported TSS
ENST00000658831.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654253.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657680.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653156.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654349.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655561.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658101.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657697.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000665669.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667339.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670692.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668238.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666471.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657497.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660807.1	Assembled from SLRseq reads (SRP049776)
ENST00000563962.6	Assembled from SLRseq reads (SRP049776)
ENST00000613406.1	CAGE supported TSS
ENST00000380962.9	non canonical polymorphism
ENST00000380966.8	NP_001027563.1
ENST00000399069.8	MANE_select
ENST00000219660.6	MANE_select
ENST00000328086.12	MANE_select
ENST00000612792.1	CAGE supported TSS
ENST00000568036.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000331351.6	MANE_select
ENST00000648941.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000653658.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669218.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417476.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653907.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000598600.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432973.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662427.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657468.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665565.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658939.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661508.1	Assembled from SLRseq reads (SRP049776)
ENST00000669695.1	Assembled from SLRseq reads (SRP049776)
ENST00000505035.3	MANE_select
ENST00000286096.9	MANE_select
ENST00000569329.1	alternative 5' UTR
ENST00000562733.1	alternative 5' UTR
ENST00000361439.9	MANE_select
ENST00000569236.5	alternative 5' UTR
ENST00000563273.5	NAGNAG splice site
ENST00000564342.5	alternative 5' UTR
ENST00000563900.5	alternative 5' UTR
ENST00000567710.5	alternative 5' UTR
ENST00000661766.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000617035.1	CAGE supported TSS
ENST00000566117.5	alternative 5' UTR
ENST00000562142.5	alternative 5' UTR
ENST00000561742.5	alternative 5' UTR
ENST00000543915.6	alternative 5' UTR
ENST00000395762.7	MANE_select
ENST00000563002.5	alternative 5' UTR
ENST00000564089.5	alternative 5' UTR
ENST00000337929.8	MANE_select
ENST00000395754.4	alternative 5' UTR
ENST00000356183.9	MANE_select
ENST00000568831.2	Assembled from SLRseq reads (SRP049776)
ENST00000670797.1	Assembled from SLRseq reads (SRP049776)
ENST00000447459.7	MANE_select
ENST00000304658.10	MANE_select
ENST00000573275.1	not organism-supported
ENST00000569216.2	NMD likely if extended
ENST00000341901.5	MANE_select
ENST00000675058.1	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000380876.5	MANE_select
ENST00000635887.1	alternative 3' UTR
ENST00000637376.1	alternative 3' UTR
ENST00000637376.1	alternative 5' UTR
ENST00000638036.1	alternative 3' UTR
ENST00000569430.7	alternative 5' UTR
ENST00000636147.2	MANE_select
ENST00000636147.2	alternative 5' UTR
ENST00000357857.14	NP_001273039.1
ENST00000333496.14	alternative 5' UTR
ENST00000567963.6	alternative 5' UTR
ENST00000565140.5	alternative 3' UTR
ENST00000637699.1	alternative 3' UTR
ENST00000636172.1	alternative 3' UTR
ENST00000635861.1	alternative 3' UTR
ENST00000635861.1	alternative 5' UTR
ENST00000635973.1	alternative 5' UTR
ENST00000568558.6	alternative 5' UTR
ENST00000567804.1	alternative 5' UTR
ENST00000565236.1	NMD likely if extended
ENST00000564831.6	MANE_select
ENST00000356897.1	MANE_select
ENST00000324873.8	MANE_select
ENST00000613454.1	CAGE supported TSS
ENST00000317058.8	MANE_select
ENST00000335715.9	MANE_select
ENST00000526384.1	alternative 5' UTR
ENST00000569554.5	alternative 5' UTR
ENST00000566189.5	alternative 5' UTR
ENST00000529716.5	not best-in-genome evidence
ENST00000566501.5	alternative 5' UTR
ENST00000569690.5	alternative 5' UTR
ENST00000331666.11	MANE_select
ENST00000566866.5	alternative 5' UTR
ENST00000564656.5	CAGE supported TSS
ENST00000570284.1	NMD likely if extended
ENST00000565845.5	NMD likely if extended
ENST00000566946.5	NAGNAG splice site
ENST00000569318.1	not organism-supported
ENST00000567024.1	alternative 3' UTR
ENST00000313511.8	MANE_select
ENST00000563591.5	alternative 5' UTR
ENST00000566209.1	alternative 5' UTR
ENST00000395532.8	alternative 5' UTR
ENST00000569651.1	not organism-supported
ENST00000395503.9	MANE_select
ENST00000565042.5	NMD likely if extended
ENST00000564112.1	alternative 3' UTR
ENST00000358201.9	MANE_select
ENST00000561803.5	NMD likely if extended
ENST00000564473.5	NMD likely if extended
ENST00000562475.5	NMD likely if extended
ENST00000538922.8	CAGE supported TSS
ENST00000538922.8	LR annotation
ENST00000538922.8	MANE_select
ENST00000538922.8	NAGNAG splice site
ENST00000562977.1	NMD likely if extended
ENST00000651604.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000567771.5	alternative 5' UTR
ENST00000568388.5	alternative 5' UTR
ENST00000565975.5	downstream ATG
ENST00000311008.16	MANE_select
ENST00000561868.1	NMD likely if extended
ENST00000395456.7	MANE_select
ENST00000564277.5	alternative 3' UTR
ENST00000563964.5	NMD likely if extended
ENST00000658292.1	Assembled from SLRseq reads (SRP049776)
ENST00000671600.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664554.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000524087.5	not best-in-genome evidence
ENST00000380596.9	non canonical TEC
ENST00000330181.9	MANE_select
ENST00000360423.12	MANE_select
ENST00000550665.1	not best-in-genome evidence
ENST00000436527.5	alternative 5' UTR
ENST00000652691.1	MANE_select
ENST00000652691.1	genebuild_only_MANE
ENST00000449759.2	alternative 5' UTR
ENST00000395384.9	MANE_select
ENST00000329410.4	MANE_select
ENST00000400752.6	MANE_select
ENST00000561482.5	alternative 5' UTR
ENST00000569636.6	alternative 5' UTR
ENST00000160827.9	MANE_select
ENST00000400751.9	alternative 5' UTR
ENST00000322945.11	MANE_select
ENST00000562594.2	NMD likely if extended
ENST00000637596.1	alternative 5' UTR
ENST00000562148.2	alternative 5' UTR
ENST00000647876.1	alternative 5' UTR
ENST00000637290.1	NMD likely if extended
ENST00000358758.12	CAGE supported TSS
ENST00000358758.12	LR annotation
ENST00000358758.12	MANE_select
ENST00000572820.2	alternative 5' UTR
ENST00000637064.1	alternative 5' UTR
ENST00000636246.1	alternative 5' UTR
ENST00000320330.8	MANE_select
ENST00000563915.5	alternative 5' UTR
ENST00000357402.10	MANE_select
ENST00000566066.5	alternative 5' UTR
ENST00000565164.1	alternative 5' UTR
ENST00000570234.5	alternative 5' UTR
ENST00000566252.1	alternative 5' UTR
ENST00000219789.11	MANE_select
ENST00000569956.5	alternative 5' UTR
ENST00000570016.5	alternative 5' UTR
ENST00000308748.10	MANE_select
ENST00000651383.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000308768.9	alternative 3' UTR
ENST00000568000.6	MANE_select
ENST00000648037.1	alternative 3' UTR
ENST00000279396.11	MANE_select
ENST00000279396.11	alternative 5' UTR
ENST00000575829.6	NAGNAG splice site
ENST00000561899.6	alternative 3' UTR
ENST00000570255.6	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000308893.9	MANE_select
ENST00000279392.8	MANE_select
ENST00000563197.6	MANE_select
ENST00000350119.9	MANE_select
ENST00000564944.5	alternative 5' UTR
ENST00000564979.5	alternative 5' UTR
ENST00000565273.5	alternative 5' UTR
ENST00000563378.5	alternative 5' UTR
ENST00000681219.1	MANE_select
ENST00000279389.8	DKFZp434I2117
ENST00000338110.10	NMD exception
ENST00000395248.6	NMD exception
ENST00000575627.5	NMD exception
ENST00000566897.6	NMD exception
ENST00000568435.6	NMD exception
ENST00000568435.6	alternative 5' UTR
ENST00000562240.1	NMD exception
ENST00000569545.5	alternative 5' UTR
ENST00000563060.6	alternative 5' UTR
ENST00000412304.6	alternative 5' UTR
ENST00000563987.5	alternative 5' UTR
ENST00000642816.3	CAGE supported TSS
ENST00000642816.3	LR annotation
ENST00000642816.3	MANE_select
ENST00000643777.4	CAGE supported TSS
ENST00000643777.4	LR annotation
ENST00000617969.1	CAGE supported TSS
ENST00000279387.12	MANE_select
ENST00000562222.5	alternative 5' UTR
ENST00000561610.1	alternative 5' UTR
ENST00000395224.7	MANE_select
ENST00000398841.6	MANE_select
ENST00000563788.5	alternative 5' UTR
ENST00000566595.5	alternative 5' UTR
ENST00000565110.5	alternative 5' UTR
ENST00000406256.8	MANE_select
ENST00000263025.9	MANE_select
ENST00000561815.5	downstream ATG
ENST00000219150.10	MANE_select
ENST00000570045.5	alternative 5' UTR
ENST00000569469.1	NMD likely if extended
ENST00000569203.5	alternative 5' UTR
ENST00000569970.1	alternative 5' UTR
ENST00000651894.2	MANE_select
ENST00000251303.11	MANE_select
ENST00000338971.10	MANE_select
ENST00000395138.6	alternative 5' UTR
ENST00000520915.5	not best-in-genome evidence
ENST00000568053.5	alternative 5' UTR
ENST00000305596.8	MANE_select
ENST00000569466.1	alternative 5' UTR
ENST00000409939.8	MANE_select
ENST00000563718.5	alternative 5' UTR
ENST00000568749.5	alternative 5' UTR
ENST00000322861.12	MANE_select
ENST00000528032.5	alternative 5' UTR
ENST00000613509.2	MANE_select
ENST00000613509.2	alternative 5' UTR
ENST00000652617.1	upstream ATG
ENST00000319296.10	MANE_select
ENST00000319285.5	MANE_select
ENST00000478753.5	MANE_select
ENST00000678203.1	EnsCodingFull|3P|XLOC_025880|TCONS_00104872:0.571969
ENST00000677830.1	rgasp_Tho_hum_qbo_solid_GM12878
ENST00000356798.11	MANE_select
ENST00000679323.1	align_id:3606696|asmbl_96861
ENST00000678574.1	align_id:3606695|asmbl_96860
ENST00000380412.7	FLJ23436
ENST00000380412.7	MANE_select
ENST00000395094.3	NAGNAG splice site
ENST00000252799.3	NAGNAG splice site
ENST00000664247.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000252797.6	NAGNAG splice site
ENST00000395091.3	MANE_select
ENST00000395091.3	NAGNAG splice site
ENST00000223459.11	FLJ16133
ENST00000223459.11	MANE_select
ENST00000657071.1	Assembled from SLRseq reads (SRP049776)
ENST00000470110.2	QC splicing correct
ENST00000395216.3	MANE_select
ENST00000287461.8	FLJ90415
ENST00000287461.8	MANE_select
ENST00000568754.5	alternative 5' UTR
ENST00000569864.5	alternative 5' UTR
ENST00000300835.9	FLJ90302
ENST00000300835.9	MANE_select
ENST00000542965.2	alternative 5' UTR
ENST00000571654.1	NMD likely if extended
ENST00000356166.11	MANE_select
ENST00000482749.1	NMD likely if extended
ENST00000494101.1	FLJ35726
ENST00000662983.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000411466.6	alternative 5' UTR
ENST00000262518.9	FLJ46149
ENST00000262518.9	MANE_select
ENST00000615541.3	CAGE supported TSS
ENST00000615541.3	MANE_select
ENST00000483578.1	CAGE supported TSS
ENST00000565924.5	alternative 5' UTR
ENST00000563588.6	MANE_select
ENST00000565897.5	alternative 5' UTR
ENST00000543610.6	MANE_select
ENST00000563909.5	alternative 5' UTR
ENST00000566811.5	alternative 5' UTR
ENST00000324685.11	MANE_select
ENST00000262525.6	MANE_select
ENST00000215115.5	MANE_select
ENST00000663816.1	Assembled from SLRseq reads (SRP049776)
ENST00000662645.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000565573.2	Assembled from SLRseq reads (SRP049776)
ENST00000656372.1	Assembled from SLRseq reads (SRP049776)
ENST00000665761.1	Assembled from SLRseq reads (SRP049776)
ENST00000658747.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000279804.3	MANE_select
ENST00000562798.2	alternative 5' UTR
ENST00000338343.10	CAGE supported TSS
ENST00000338343.10	MANE_select
ENST00000338343.10	alternative 5' UTR
ENST00000318663.5	MANE_select
ENST00000262519.14	AT-AC splicing between exons 14 and 15
ENST00000262519.14	KIAA0339
ENST00000262519.14	MANE_select
ENST00000297679.10	MANE_select
ENST00000574447.1	alternative 5' UTR
ENST00000215095.11	MANE_select
ENST00000566353.6	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000313843.8	MANE_select
ENST00000300849.5	MANE_select
ENST00000426488.6	alternative 5' UTR
ENST00000394983.6	alternative 5' UTR
ENST00000442862.2	alternative 5' UTR
ENST00000417935.1	alternative 5' UTR
ENST00000300850.5	MANE_select
ENST00000564189.1	alternative 5' UTR
ENST00000428260.1	alternative 5' UTR
ENST00000486499.1	novel transcript
ENST00000354895.4	FLJ26002
ENST00000394975.3	MANE_select
ENST00000394951.5	alternative 5' UTR
ENST00000219794.11	MANE_select
ENST00000561755.1	alternative 5' UTR
ENST00000567676.1	alternative 5' UTR
ENST00000652764.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000219797.9	MANE_select
ENST00000219797.9	genebuild_only_MANE
ENST00000317508.11	MANE_select
ENST00000268281.9	MANE_select
ENST00000254108.12	MANE_select
ENST00000247470.10	FLJ20204
ENST00000247470.10	MANE_select
ENST00000322122.8	MANE_select
ENST00000302964.4	MANE_select
ENST00000544665.9	CAGE supported TSS
ENST00000544665.9	LR annotation
ENST00000544665.9	MANE_select
ENST00000544665.9	NAGNAG splice site
ENST00000268296.9	MANE_select
ENST00000389202.3	MANE_select
ENST00000287490.5	MANE_select
ENST00000315678.10	MANE_select
ENST00000268314.9	CAGE supported TSS
ENST00000268314.9	MANE_select
ENST00000268314.9	alternative 5' UTR
ENST00000565454.5	alternative 5' UTR
ENST00000394863.8	MANE_select
ENST00000562566.5	alternative 5' UTR
ENST00000567607.5	alternative 5' UTR
ENST00000330498.4	MANE_select
ENST00000327237.7	MANE_select
ENST00000651898.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000302312.9	MANE_select
ENST00000564707.1	alternative 5' UTR
ENST00000659783.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662819.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655928.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000300870.15	MANE_select
ENST00000568138.2	IGHV1/OR16-3*01
ENST00000568138.2	P
ENST00000354689.6	IGHV3/OR16-9*01
ENST00000354689.6	ORF
ENST00000663028.1	Assembled from SLRseq reads (SRP049776)
ENST00000663314.1	Assembled from SLRseq reads (SRP049776)
ENST00000623042.1	LOC102724127
ENST00000567458.2	IGHV2/OR16-5*01
ENST00000567458.2	ORF
ENST00000669084.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000568775.2	IGHV3/OR16-6*01
ENST00000568775.2	P
ENST00000564937.2	IGHV1/OR16-2*01
ENST00000564937.2	P
ENST00000425181.3	IGHV3/OR16-10*01
ENST00000425181.3	ORF
ENST00000566350.2	IGHV1/OR16-4*01
ENST00000566350.2	P
ENST00000565407.2	IGHV3/OR16-8*01
ENST00000565407.2	ORF
ENST00000623491.1	LOC102724101
ENST00000623491.1	not best-in-genome evidence
ENST00000648463.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000570121.2	IGHV3/OR16-12*01
ENST00000570121.2	ORF
ENST00000562905.2	IGHV3/OR16-13*01
ENST00000562905.2	ORF
ENST00000569103.2	ORF
ENST00000438532.4	P
ENST00000603958.1	P
ENST00000565524.3	IGHV3/OR16-11*01
ENST00000565524.3	P
ENST00000604106.1	IGHV3/OR16-7*01
ENST00000604106.1	P
ENST00000567603.1	P
ENST00000563644.2	P
ENST00000649056.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000561990.3	P
ENST00000568778.3	P
ENST00000611928.2	LOC100418756
ENST00000563400.1	LOC100422055
ENST00000565523.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655356.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669901.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657477.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000568299.2	LOC101059926
ENST00000562979.1	LOC100128804
ENST00000568807.2	LOC101059920
ENST00000561884.1	LOC100127958
ENST00000565394.1	LOC100420859
ENST00000567900.1	LOC100128103
ENST00000565542.1	LOC100131279
ENST00000562068.2	LOC100419895
ENST00000659854.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000562032.1	LOC642614
ENST00000656703.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662587.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667946.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656785.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666603.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664405.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653340.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669868.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658117.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000562369.1	LOC100132606
ENST00000563532.1	LOC727964
ENST00000567585.2	LOC642683
ENST00000303383.8	FLJ22009
ENST00000303383.8	FLJ31369
ENST00000303383.8	MANE_select
ENST00000299138.12	MANE_select
ENST00000647959.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000219097.7	FLJ11884
ENST00000219097.7	FLJ13957
ENST00000219097.7	MANE_select
ENST00000394809.9	MANE_select
ENST00000285697.9	MANE_select
ENST00000340124.9	FLJ33638
ENST00000340124.9	MANE_select
ENST00000317089.10	MANE_select
ENST00000562536.1	CAGE supported TSS
ENST00000562435.6	MANE_select
ENST00000564705.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000320640.11	FLJ14690
ENST00000320640.11	MANE_select
ENST00000566037.6	alternative 5' UTR
ENST00000299167.12	alternative 5' UTR
ENST00000323584.10	MANE_select
ENST00000563376.5	alternative 5' UTR
ENST00000567200.1	alternative 5' UTR
ENST00000564873.1	alternative 5' UTR
ENST00000657877.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667168.1	Assembled from SLRseq reads (SRP049776)
ENST00000649885.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000527640.1	alternative 5' UTR
ENST00000356608.7	MANE_select
ENST00000394747.5	alternative 5' UTR
ENST00000569991.1	alternative 5' UTR
ENST00000285737.9	MANE_select
ENST00000380006.2	alternative 5' UTR
ENST00000394725.3	MANE_select
ENST00000563745.1	alternative 5' UTR
ENST00000262384.4	MANE_select
ENST00000564710.1	alternative 5' UTR
ENST00000568150.3	Assembled from SLRseq reads (SRP049776)
ENST00000655430.1	Assembled from SLRseq reads (SRP049776)
ENST00000659681.1	Assembled from SLRseq reads (SRP049776)
ENST00000219197.11	MANE_select
ENST00000654606.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662939.1	Assembled from SLRseq reads (SRP049776)
ENST00000667121.1	Assembled from SLRseq reads (SRP049776)
ENST00000666248.1	Assembled from SLRseq reads (SRP049776)
ENST00000662260.1	Assembled from SLRseq reads (SRP049776)
ENST00000662771.1	Assembled from SLRseq reads (SRP049776)
ENST00000654109.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661501.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664244.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668624.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659070.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659070.1	Assembled from SLRseq reads (SRP049776)
ENST00000664979.1	Assembled from SLRseq reads (SRP049776)
ENST00000665277.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665277.1	Assembled from SLRseq reads (SRP049776)
ENST00000669545.1	Assembled from SLRseq reads (SRP049776)
ENST00000664312.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656377.1	Assembled from SLRseq reads (SRP049776)
ENST00000654193.1	Assembled from SLRseq reads (SRP049776)
ENST00000662122.1	Assembled from SLRseq reads (SRP049776)
ENST00000671642.1	Assembled from SLRseq reads (SRP049776)
ENST00000660181.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655726.1	Assembled from SLRseq reads (SRP049776)
ENST00000667574.1	Assembled from SLRseq reads (SRP049776)
ENST00000655632.1	Assembled from SLRseq reads (SRP049776)
ENST00000668213.1	Assembled from SLRseq reads (SRP049776)
ENST00000671113.1	Assembled from SLRseq reads (SRP049776)
ENST00000667110.1	Assembled from SLRseq reads (SRP049776)
ENST00000654738.1	Assembled from SLRseq reads (SRP049776)
ENST00000663277.1	Assembled from SLRseq reads (SRP049776)
ENST00000663746.1	Assembled from SLRseq reads (SRP049776)
ENST00000664655.1	Assembled from SLRseq reads (SRP049776)
ENST00000668965.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670604.1	Assembled from SLRseq reads (SRP049776)
ENST00000659733.1	Assembled from SLRseq reads (SRP049776)
ENST00000665785.1	Assembled from SLRseq reads (SRP049776)
ENST00000659128.1	Assembled from SLRseq reads (SRP049776)
ENST00000654886.1	Assembled from SLRseq reads (SRP049776)
ENST00000659529.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664562.1	Assembled from SLRseq reads (SRP049776)
ENST00000655236.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664315.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661277.1	Assembled from SLRseq reads (SRP049776)
ENST00000653520.1	Assembled from SLRseq reads (SRP049776)
ENST00000656220.1	Assembled from SLRseq reads (SRP049776)
ENST00000666113.1	Assembled from SLRseq reads (SRP049776)
ENST00000654991.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670205.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670901.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656938.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656938.1	Assembled from SLRseq reads (SRP049776)
ENST00000671636.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657271.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663876.1	Assembled from SLRseq reads (SRP049776)
ENST00000669496.1	Assembled from SLRseq reads (SRP049776)
ENST00000653054.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658470.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669786.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662695.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665128.1	Assembled from SLRseq reads (SRP049776)
ENST00000654122.1	Assembled from SLRseq reads (SRP049776)
ENST00000659163.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657569.1	Assembled from SLRseq reads (SRP049776)
ENST00000660791.1	Assembled from SLRseq reads (SRP049776)
ENST00000661880.1	Assembled from SLRseq reads (SRP049776)
ENST00000670042.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662365.1	Assembled from SLRseq reads (SRP049776)
ENST00000666530.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670027.1	Assembled from SLRseq reads (SRP049776)
ENST00000655576.1	Assembled from SLRseq reads (SRP049776)
ENST00000669637.1	Assembled from SLRseq reads (SRP049776)
ENST00000659313.1	Assembled from SLRseq reads (SRP049776)
ENST00000564875.2	Assembled from SLRseq reads (SRP049776)
ENST00000671435.1	Assembled from SLRseq reads (SRP049776)
ENST00000667688.1	Assembled from SLRseq reads (SRP049776)
ENST00000653582.1	Assembled from SLRseq reads (SRP049776)
ENST00000659639.1	Assembled from SLRseq reads (SRP049776)
ENST00000664631.1	Assembled from SLRseq reads (SRP049776)
ENST00000668453.1	Assembled from SLRseq reads (SRP049776)
ENST00000668802.1	Assembled from SLRseq reads (SRP049776)
ENST00000663938.1	Assembled from SLRseq reads (SRP049776)
ENST00000299191.4	MANE_select
ENST00000654002.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000563137.7	CAGE supported TSS
ENST00000563137.7	MANE_select
ENST00000427478.7	MANE_select
ENST00000427478.7	Supported by Q8N9A8
ENST00000427478.7	align_id:3607368|asmbl_97533
ENST00000299192.8	MANE_select
ENST00000657788.1	Assembled from SLRseq reads (SRP049776)
ENST00000561678.7	MANE_select
ENST00000562717.1	NMD likely if extended
ENST00000357464.4	NMD likely if extended
ENST00000564965.5	alternative 5' UTR
ENST00000394697.7	CAGE supported TSS
ENST00000394697.7	alternative 5' UTR
ENST00000673801.1	CAGE supported TSS
ENST00000673801.1	MANE_select
ENST00000569265.1	alternative 5' UTR
ENST00000394688.8	MANE_select
ENST00000666416.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666395.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664136.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000268459.6	MANE_select
ENST00000570241.3	Assembled from SLRseq reads (SRP049776)
ENST00000300590.7	FLJ31275
ENST00000330943.9	MANE_select
ENST00000526417.6	NMD likely if extended
ENST00000647318.2	MANE_select
ENST00000532206.1	NMD likely if extended
ENST00000524712.5	NMD likely if extended
ENST00000527052.5	NMD likely if extended
ENST00000529633.5	NMD likely if extended
ENST00000564326.5	alternative 5' UTR
ENST00000427738.8	CAGE supported TSS
ENST00000427738.8	MANE_select
ENST00000566679.6	alternative 5' UTR
ENST00000564634.5	alternative 5' UTR
ENST00000398568.6	alternative 5' UTR
ENST00000568704.2	not organism-supported
ENST00000662292.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661857.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665312.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665157.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663343.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661631.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668895.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657894.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666836.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662402.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666352.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655464.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655469.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669971.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654545.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654497.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669828.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666019.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655070.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657102.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661531.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000568607.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657135.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000563826.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658899.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660062.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653336.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660371.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000251020.9	MANE_select
ENST00000661708.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667113.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000569993.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655537.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670615.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000566439.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670505.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659332.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658449.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660788.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656714.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670037.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664235.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668292.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659261.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000568286.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669923.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671171.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652857.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653084.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656784.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670500.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660275.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665777.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662008.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668506.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668506.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000661626.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668976.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661876.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000219746.14	MANE_select
ENST00000510238.8	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652959.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671536.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000650564.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000666161.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000565153.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669181.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660191.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655643.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000564361.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659772.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663409.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661921.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661547.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660107.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659170.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656843.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666586.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661757.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664440.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000619363.2	CAGE supported TSS
ENST00000565832.5	alternative 5' UTR
ENST00000564845.5	alternative 5' UTR
ENST00000563410.1	alternative 5' UTR
ENST00000565803.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000564600.6	NMD likely if extended
ENST00000566383.2	Assembled from SLRseq reads (SRP049776)
ENST00000262133.11	FLJ26459
ENST00000262133.11	MANE_select
ENST00000394657.12	MANE_select
ENST00000300245.8	alternative 5' UTR
ENST00000570004.5	alternative 5' UTR
ENST00000563928.5	alternative 5' UTR
ENST00000565408.5	alternative 5' UTR
ENST00000568596.5	alternative 5' UTR
ENST00000570041.1	alternative 5' UTR
ENST00000564497.1	alternative 5' UTR
ENST00000664313.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647211.2	CAGE supported TSS
ENST00000647211.2	LR annotation
ENST00000647211.2	MANE_select
ENST00000562588.5	alternative 5' UTR
ENST00000679110.1	alternative 5' UTR
ENST00000471389.6	MANE_select
ENST00000460382.5	alternative 5' UTR
ENST00000649252.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000329734.4	MANE_select
ENST00000637770.1	CAGE supported TSS
ENST00000660155.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668085.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000661222.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669832.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663832.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660981.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000637822.1	non canonical TEC
ENST00000637961.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000654070.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667913.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659020.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658082.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661493.1	Assembled from SLRseq reads (SRP049776)
ENST00000668556.1	Assembled from SLRseq reads (SRP049776)
ENST00000660344.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000502066.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000502066.7	Assembled from SLRseq reads (SRP049776)
ENST00000559598.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000559598.7	Assembled from SLRseq reads (SRP049776)
ENST00000501177.8	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661312.1	Assembled from SLRseq reads (SRP049776)
ENST00000657142.1	Assembled from SLRseq reads (SRP049776)
ENST00000557792.2	Assembled from SLRseq reads (SRP049776)
ENST00000558031.6	Assembled from SLRseq reads (SRP049776)
ENST00000655114.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000558952.2	Assembled from SLRseq reads (SRP049776)
ENST00000659355.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000394636.9	MANE_select
ENST00000394636.9	NAGNAG splice site
ENST00000320990.9	NAGNAG splice site
ENST00000650608.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000290552.8	MANE_select
ENST00000570308.5	alternative 5' UTR
ENST00000568715.5	alternative 5' UTR
ENST00000219070.9	MANE_select
ENST00000564864.5	alternative 5' UTR
ENST00000664911.1	Assembled from RACEseq reads
ENST00000262134.10	MANE_select
ENST00000457326.3	MANE_select
ENST00000568943.5	alternative 5' UTR
ENST00000568655.5	alternative 5' UTR
ENST00000360526.8	MANE_select
ENST00000290567.14	MANE_select
ENST00000521992.5	NP_001177087.1
ENST00000319165.13	FLJ31547
ENST00000518005.5	upstream uORF
ENST00000544479.1	not organism-supported
ENST00000536025.1	alternative 5' UTR
ENST00000536025.1	upstream uORF
ENST00000657483.1	Assembled from SLRseq reads (SRP049776)
ENST00000663751.1	Assembled from SLRseq reads (SRP049776)
ENST00000668774.1	Assembled from SLRseq reads (SRP049776)
ENST00000665141.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000662188.1	Assembled from SLRseq reads (SRP049776)
ENST00000664309.1	Assembled from SLRseq reads (SRP049776)
ENST00000565155.2	Assembled from SLRseq reads (SRP049776)
ENST00000662870.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661960.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648729.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000654562.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000262493.12	MANE_select
ENST00000638705.1	alternative 3' UTR
ENST00000640469.1	alternative 3' UTR
ENST00000664019.1	Assembled from SLRseq reads (SRP049776)
ENST00000290649.10	MANE_select
ENST00000300291.10	MANE_select
ENST00000566157.6	MANE_select
ENST00000568397.1	not organism-supported
ENST00000245157.11	MANE_select
ENST00000219162.4	MANE_select
ENST00000200691.5	MANE_select
ENST00000245185.6	MANE_select
ENST00000330439.7	MANE_select
ENST00000379818.4	MANE_select
ENST00000290705.12	MANE_select
ENST00000334346.3	MANE_select
ENST00000334350.7	MANE_select
ENST00000379811.4	MANE_select
ENST00000332374.5	MANE_select
ENST00000394485.5	MANE_select
ENST00000668197.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000561663.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000566315.5	alternative 5' UTR
ENST00000308159.10	MANE_select
ENST00000569863.5	alternative 5' UTR
ENST00000562496.5	alternative 5' UTR
ENST00000568656.5	alternative 5' UTR
ENST00000564887.5	NP_001229724.1
ENST00000567641.5	alternative 5' UTR
ENST00000568283.5	alternative 5' UTR
ENST00000567081.5	alternative 5' UTR
ENST00000542526.5	NP_001229725.1
ENST00000542526.5	alternative 5' UTR
ENST00000566786.5	NAGNAG splice site
ENST00000438926.6	NP_000330.2
ENST00000563236.6	MANE_select
ENST00000262502.5	NAGNAG splice site
ENST00000439977.7	MANE_select
ENST00000300302.9	NAGNAG splice site
ENST00000344114.8	NAGNAG splice site
ENST00000568358.1	not organism-supported
ENST00000200676.8	MANE_select
ENST00000569082.1	not organism-supported
ENST00000566128.1	not organism-supported
ENST00000650358.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000262510.10	FLJ39711
ENST00000544641.5	alternative 5' UTR
ENST00000538059.5	alternative 5' UTR
ENST00000539144.5	Evidence: human Swiss-Prot isoform Q86WI3-4.3
ENST00000539144.5	confirm experimentally
ENST00000538805.5	NAGNAG splice site
ENST00000538110.5	NAGNAG splice site
ENST00000538930.5	NAGNAG splice site
ENST00000538778.5	NAGNAG splice site
ENST00000537056.5	NAGNAG splice site
ENST00000290776.13	MANE_select
ENST00000535318.6	alternative 5' UTR
ENST00000566259.1	alternative 5' UTR
ENST00000565874.5	alternative 5' UTR
ENST00000309137.13	MANE_select
ENST00000569266.5	alternative 5' UTR
ENST00000567439.5	alternative 5' UTR
ENST00000564108.5	alternative 5' UTR
ENST00000562324.5	alternative 5' UTR
ENST00000567044.5	alternative 5' UTR
ENST00000565458.5	alternative 5' UTR
ENST00000562406.5	alternative 5' UTR
ENST00000566584.5	alternative 5' UTR
ENST00000568671.5	alternative 5' UTR
ENST00000565760.5	alternative 5' UTR
ENST00000566481.5	alternative 5' UTR
ENST00000570184.1	alternative 5' UTR
ENST00000566681.1	alternative 5' UTR
ENST00000564424.1	alternative 5' UTR
ENST00000649140.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000562439.5	alternative 5' UTR
ENST00000564435.5	alternative 5' UTR
ENST00000568505.6	alternative 5' UTR
ENST00000394420.9	MANE_select
ENST00000537866.5	alternative 5' UTR
ENST00000561641.1	alternative 5' UTR
ENST00000219204.8	MANE_select
ENST00000219207.10	MANE_select
ENST00000219235.5	MANE_select
ENST00000563383.1	not organism-supported
ENST00000006053.7	MANE_select
ENST00000219244.9	MANE_select
ENST00000219244.9	corf
ENST00000219244.9	upstream ATG
ENST00000394391.9	MANE_select
ENST00000570000.5	alternative 5' UTR
ENST00000563341.1	alternative 5' UTR
ENST00000262507.11	MANE_select
ENST00000219252.10	MANE_select
ENST00000566936.5	alternative 5' UTR
ENST00000569548.5	alternative 5' UTR
ENST00000569010.5	alternative 5' UTR
ENST00000569250.5	alternative 5' UTR
ENST00000564378.5	alternative 5' UTR
ENST00000562737.5	alternative 5' UTR
ENST00000568617.5	alternative 5' UTR
ENST00000567276.5	alternative 5' UTR
ENST00000566588.5	alternative 5' UTR
ENST00000567214.5	alternative 5' UTR
ENST00000569538.5	alternative 5' UTR
ENST00000566705.5	alternative 5' UTR
ENST00000562008.5	alternative 5' UTR
ENST00000567175.1	alternative 5' UTR
ENST00000258214.3	MANE_select
ENST00000349457.8	MANE_select
ENST00000349457.8	alternative 5' UTR
ENST00000565587.5	alternative 5' UTR
ENST00000568791.5	alternative 5' UTR
ENST00000570044.5	alternative 5' UTR
ENST00000567553.5	alternative 5' UTR
ENST00000565314.5	alternative 5' UTR
ENST00000564912.5	NAGNAG splice site
ENST00000564912.5	NMD likely if extended
ENST00000562673.5	NMD likely if extended
ENST00000566778.5	alternative 5' UTR
ENST00000562101.5	NMD likely if extended
ENST00000561872.5	NMD likely if extended
ENST00000561988.5	alternative 5' UTR
ENST00000567835.5	alternative 5' UTR
ENST00000569372.5	alternative 5' UTR
ENST00000563548.5	alternative 5' UTR
ENST00000562003.5	alternative 5' UTR
ENST00000561833.5	alternative 5' UTR
ENST00000569531.5	alternative 5' UTR
ENST00000565013.5	alternative 5' UTR
ENST00000561696.5	alternative 5' UTR
ENST00000562414.5	alternative 5' UTR
ENST00000561969.5	alternative 5' UTR
ENST00000563445.5	alternative 5' UTR
ENST00000562608.5	NMD likely if extended
ENST00000565338.5	alternative 5' UTR
ENST00000567702.5	alternative 5' UTR
ENST00000567154.5	alternative 5' UTR
ENST00000388813.9	alternative 5' UTR
ENST00000563007.5	alternative 5' UTR
ENST00000562558.6	alternative 5' UTR
ENST00000566271.6	alternative 5' UTR
ENST00000568645.5	alternative 5' UTR
ENST00000563374.5	alternative 5' UTR
ENST00000673126.2	alternative 5' UTR
ENST00000562631.7	CAGE supported TSS
ENST00000562631.7	LR annotation
ENST00000562631.7	MANE_select
ENST00000562631.7	alternative 5' UTR
ENST00000568234.5	alternative 5' UTR
ENST00000565770.5	alternative 5' UTR
ENST00000566164.5	alternative 5' UTR
ENST00000567397.5	alternative 5' UTR
ENST00000568979.5	alternative 5' UTR
ENST00000569992.5	NMD likely if extended
ENST00000566123.5	alternative 5' UTR
ENST00000562682.5	alternative 5' UTR
ENST00000561782.5	alternative 5' UTR
ENST00000564783.5	alternative 5' UTR
ENST00000564729.5	alternative 5' UTR
ENST00000566888.5	NMD likely if extended
ENST00000565976.6	alternative 5' UTR
ENST00000566508.5	alternative 5' UTR
ENST00000565539.5	alternative 5' UTR
ENST00000567915.5	alternative 5' UTR
ENST00000569132.5	NMD likely if extended
ENST00000564103.5	alternative 5' UTR
ENST00000562467.5	alternative 5' UTR
ENST00000540164.6	alternative 5' UTR
ENST00000568531.5	alternative 5' UTR
ENST00000564360.5	alternative 5' UTR
ENST00000568074.5	alternative 5' UTR
ENST00000563414.5	alternative 5' UTR
ENST00000568618.5	alternative 5' UTR
ENST00000569494.5	alternative 5' UTR
ENST00000566169.5	alternative 5' UTR
ENST00000568157.5	alternative 5' UTR
ENST00000569154.5	alternative 5' UTR
ENST00000569101.5	alternative 5' UTR
ENST00000563862.5	alternative 5' UTR
ENST00000564722.5	alternative 5' UTR
ENST00000569158.5	alternative 5' UTR
ENST00000566187.1	alternative 5' UTR
ENST00000333493.9	MANE_select
ENST00000569375.5	alternative 5' UTR
ENST00000360716.8	MANE_select
ENST00000562250.1	not organism-supported
ENST00000562592.5	alternative 5' UTR
ENST00000379661.8	MANE_select
ENST00000566611.5	alternative 5' UTR
ENST00000566785.5	alternative 5' UTR
ENST00000465878.6	alternative 5' UTR
ENST00000445690.7	MANE_select
ENST00000421376.6	alternative 5' UTR
ENST00000562903.5	NP_001123571.1
ENST00000567204.5	NMD likely if extended
ENST00000565351.5	alternative 5' UTR
ENST00000565684.5	alternative 5' UTR
ENST00000564891.1	alternative 5' UTR
ENST00000251102.13	MANE_select
ENST00000564654.1	CAGE supported TSS
ENST00000562761.1	alternative 5' UTR
ENST00000290871.10	upstream ATG
ENST00000441824.3	upstream ATG
ENST00000299237.3	MANE_select
ENST00000562909.1	alternative 5' UTR
ENST00000565662.5	NMD likely if extended
ENST00000219281.8	MANE_select
ENST00000563207.1	NMD likely if extended
ENST00000219271.4	MANE_select
ENST00000262498.8	MANE_select
ENST00000569580.2	Assembled from SLRseq reads (SRP049776)
ENST00000656934.1	Assembled from SLRseq reads (SRP049776)
ENST00000660742.1	Assembled from SLRseq reads (SRP049776)
ENST00000262506.8	MANE_select
ENST00000563307.2	alternative 3' UTR
ENST00000219299.8	MANE_select
ENST00000443128.6	NP_001135774.1
ENST00000567164.6	MANE_select
ENST00000543437.5	NAGNAG splice site
ENST00000569727.1	NAGNAG splice site
ENST00000426538.6	NP_001119601.1
ENST00000318129.6	MANE_select
ENST00000318129.6	NP_073607.2
ENST00000613275.1	CAGE supported TSS
ENST00000568999.5	alternative 5' UTR
ENST00000564207.5	alternative 5' UTR
ENST00000565304.5	alternative 5' UTR
ENST00000567667.5	alternative 5' UTR
ENST00000566065.5	NMD likely if extended
ENST00000564867.5	alternative 5' UTR
ENST00000565430.5	alternative 5' UTR
ENST00000566041.5	alternative 5' UTR
ENST00000565434.5	alternative 5' UTR
ENST00000561724.5	alternative 5' UTR
ENST00000219315.9	MANE_select
ENST00000418480.1	NMD likely if extended
ENST00000317147.10	MANE_select
ENST00000569882.1	NAGNAG splice site
ENST00000564557.1	alternative 5' UTR
ENST00000565697.1	alternative 5' UTR
ENST00000569020.5	alternative 5' UTR
ENST00000570101.5	alternative 5' UTR
ENST00000219320.9	MANE_select
ENST00000562397.5	alternative 5' UTR
ENST00000563196.5	alternative 5' UTR
ENST00000245206.10	MANE_select
ENST00000568134.6	Assembled from SLRseq reads (SRP049776)
ENST00000657379.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000662590.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000562304.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000569328.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661470.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661803.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660937.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659433.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661762.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668278.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000614215.2	LOC729159
ENST00000661512.1	Assembled from SLRseq reads (SRP049776)
ENST00000577730.5	There is another potential exon upstream of this model which would be an upstream part of the 5' UTR and would splice to the model defined here. However, it was not annotated because the alignment is poor and it was not possible to assign the splice site with confidence. However, there is reasonable support for position 357 of  mouse cDNA Em:AK083092.1 and genomic coordinates 62069984 as the last base of this potential upstream exon. The first base of this potential upstream exon is 62070250
ENST00000577390.6	MANE_select
ENST00000583382.1	The model is largely based on the Bos taurus cDNA Em:BC133346.1 which does not align well in BLIXEM so the alignment was confirmed with DOTTER
ENST00000583382.1	alternative 5' UTR
ENST00000584506.1	alternative 5' UTR
ENST00000658092.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665929.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655786.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655106.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664326.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656744.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666316.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661557.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000563061.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000268603.9	MANE_select
ENST00000567934.5	alternative 5' UTR
ENST00000562998.1	alternative 5' UTR
ENST00000564317.5	alternative 5' UTR
ENST00000562712.5	alternative 5' UTR
ENST00000563754.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000562742.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663911.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663762.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662702.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663867.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656349.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666324.1	Assembled from SLRseq reads (SRP049776)
ENST00000341529.8	MANE_select
ENST00000649567.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000649567.1	alternative 5' UTR
ENST00000562048.5	alternative 5' UTR
ENST00000568155.2	alternative 5' UTR
ENST00000568023.1	alternative 5' UTR
ENST00000568023.1	upstream ATG
ENST00000536005.7	MANE_select
ENST00000569272.1	alternative 5' UTR
ENST00000676728.1	Snaptron_GTEX
ENST00000678759.1	Snaptron_GTEX
ENST00000677175.1	Snaptron_GTEX
ENST00000569125.1	CAGE supported TSS
ENST00000678867.1	Snaptron_GTEX
ENST00000678867.1	intropolis_filtered
ENST00000677568.1	Snaptron_GTEX
ENST00000677589.1	Snaptron_GTEX
ENST00000678451.1	Snaptron_GTEX
ENST00000676821.1	Snaptron_GTEX
ENST00000677668.1	Snaptron_GTEX
ENST00000677668.1	intropolis_filtered
ENST00000677753.1	Snaptron_GTEX
ENST00000678282.1	Snaptron_GTEX
ENST00000678257.1	Snaptron_GTEX
ENST00000678257.1	alternative 3' UTR
ENST00000677405.1	Snaptron_GTEX
ENST00000677166.1	Snaptron_GTEX
ENST00000544898.6	CAGE supported TSS
ENST00000544898.6	CCDS10805.2
ENST00000544898.6	MANE_select
ENST00000677535.1	Snaptron_GTEX
ENST00000677535.1	alternative 3' UTR
ENST00000678219.1	Snaptron_GTEX
ENST00000678219.1	alternative 3' UTR
ENST00000677319.1	Snaptron_GTEX
ENST00000677319.1	alternative 3' UTR
ENST00000678099.1	Snaptron_GTEX
ENST00000678099.1	alternative 3' UTR
ENST00000678861.1	Snaptron_GTEX
ENST00000678861.1	alternative 3' UTR
ENST00000620035.5	SLR-seq_HsBN_lib10
ENST00000299697.12	SLR-seq_TB0000032
ENST00000451102.7	CCDS54018.1
ENST00000451102.7	SLR-seq_HsBN_lib7
ENST00000678015.1	CAGE supported TSS
ENST00000678015.1	SLR-seq_HsBN_lib8
ENST00000678015.1	alternative 5' UTR
ENST00000527800.6	SLR-seq_HsBN_lib11
ENST00000527800.6	alternative 5' UTR
ENST00000567357.6	upstream ATG
ENST00000677420.1	SLR-seq_HsBN_lib6
ENST00000677420.1	alternative 5' UTR
ENST00000527284.6	SLR-seq_HsBN_lib10
ENST00000677555.1	SLR-seq_HsBN_lib6
ENST00000677555.1	alternative 5' UTR
ENST00000678297.1	SLR-seq_HsBN_lib7
ENST00000678297.1	alternative 5' UTR
ENST00000545043.6	CAGE supported TSS
ENST00000545043.6	CCDS54016.1
ENST00000564917.5	CAGE supported TSS
ENST00000525974.5	alternative 5' UTR
ENST00000678190.1	Snaptron_GTEX
ENST00000678190.1	intropolis_filtered
ENST00000569718.6	CAGE supported TSS
ENST00000569718.6	Snaptron_GTEX
ENST00000569718.6	intropolis_filtered
ENST00000417693.8	CCDS54017.1
ENST00000417693.8	upstream ATG
ENST00000677715.1	CCDS61955.1
ENST00000677715.1	pacbio_align_id:1317402|asmbl_37305_PASA_cluster_8776
ENST00000563369.6	alternative 5' UTR
ENST00000677296.1	Snaptron_GTEX
ENST00000677961.1	Snaptron_GTEX
ENST00000677961.1	intropolis_filtered
ENST00000676904.1	Snaptron_GTEX
ENST00000676904.1	intropolis_filtered
ENST00000677379.1	Snaptron_GTEX
ENST00000677379.1	intropolis_filtered
ENST00000676538.1	Snaptron_GTEX
ENST00000563478.5	alternative 5' UTR
ENST00000678314.1	CAGE supported TSS
ENST00000678314.1	SLR-seq_HsBN_lib9
ENST00000678314.1	alternative 5' UTR
ENST00000562484.2	CAGE supported TSS
ENST00000562484.2	alternative 5' UTR
ENST00000676718.1	Intropolis_filtered
ENST00000676718.1	Snaptron_GTEX
ENST00000679306.1	Snaptron_GTEX
ENST00000677739.1	Snaptron_GTEX
ENST00000677739.1	intropolis_filtered
ENST00000678746.1	Snaptron_GTEX
ENST00000678746.1	intropolis_filtered
ENST00000677497.1	Snaptron_GTEX
ENST00000677497.1	intropolis_filtered
ENST00000679154.1	Snaptron_GTEX
ENST00000678864.1	Snaptron_GTEX
ENST00000678864.1	intropolis_filtered
ENST00000676536.1	Snaptron_GTEX
ENST00000676536.1	intropolis_filtered
ENST00000677541.1	Snaptron_GTEX
ENST00000677541.1	intropolis_filtered
ENST00000679327.1	SLRseq_align_id:3608700|asmbl_98865_PASA_cluster_8376
ENST00000678336.1	Snaptron_GTEX
ENST00000678336.1	intropolis_filtered
ENST00000678205.1	Snaptron_GTEX
ENST00000677412.1	Snaptron_GTEX
ENST00000677412.1	intropolis_filtered
ENST00000678639.1	Snaptron_GTEX
ENST00000678639.1	intropolis filtered
ENST00000677124.1	Snaptron_GTEX
ENST00000677124.1	intropolis filtered
ENST00000679271.1	Snaptron_GTEX
ENST00000679271.1	intropolis_filtered
ENST00000677117.1	Snaptron_GTEX
ENST00000264001.9	MANE_select
ENST00000379500.7	MANE_select
ENST00000268595.3	MANE_select
ENST00000563672.5	alternative 5' UTR
ENST00000424011.6	alternative 5' UTR
ENST00000562357.5	alternative 5' UTR
ENST00000562707.5	alternative 5' UTR
ENST00000361909.8	alternative 5' UTR
ENST00000567572.6	MANE_select
ENST00000567572.6	alternative 5' UTR
ENST00000394106.7	MANE_select
ENST00000258198.7	MANE_select
ENST00000665797.1	Assembled from SLRseq reads (SRP049776)
ENST00000649944.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000433154.6	MANE_select
ENST00000561333.1	NMD likely if extended
ENST00000359087.8	FLJ40361
ENST00000290810.8	MANE_select
ENST00000564040.6	NMD likely if extended
ENST00000338437.7	MANE_select
ENST00000394069.3	upstream uORF
ENST00000568869.1	alternative 5' UTR
ENST00000311765.4	MANE_select
ENST00000299752.9	MANE_select
ENST00000299759.11	MANE_select
ENST00000299759.11	QC splicing correct
ENST00000422424.7	MANE_select
ENST00000422424.7	non canonical conserved
ENST00000417689.6	upstream ATG
ENST00000317091.10	MANE_select
ENST00000566869.1	NMD likely if extended
ENST00000303334.9	MANE_select
ENST00000540947.6	upstream ATG
ENST00000290858.11	CAGE supported TSS
ENST00000290858.11	LR annotation
ENST00000412916.7	CAGE supported TSS
ENST00000412916.7	MANE_select
ENST00000219139.8	MANE_select
ENST00000449549.4	MANE_select
ENST00000345057.9	MANE_select
ENST00000258200.8	MANE_select
ENST00000519917.5	alternative 3' UTR
ENST00000523893.1	alternative 5' UTR
ENST00000521374.6	MANE_select
ENST00000565560.5	alternative 5' UTR
ENST00000565560.5	upstream ATG
ENST00000563439.5	alternative 5' UTR
ENST00000564992.1	alternative 5' UTR
ENST00000564053.5	upstream ATG
ENST00000563902.2	MANE_select
ENST00000563902.2	alternative 5' UTR
ENST00000570009.1	NMD likely if extended
ENST00000314586.11	MANE_select
ENST00000562887.1	NMD likely if extended
ENST00000379378.8	MANE_select
ENST00000379378.8	non canonical conserved
ENST00000360833.6	upstream ATG
ENST00000393997.8	MANE_select
ENST00000393997.8	upstream ATG
ENST00000571638.1	NMD likely if extended
ENST00000637079.1	orthologous to mouse XP_006530956.1
ENST00000304800.14	MANE_select
ENST00000258201.9	MANE_select
ENST00000561472.2	NMD likely if extended
ENST00000299798.16	MANE_select
ENST00000379344.8	MANE_select
ENST00000304372.6	MANE_select
ENST00000562860.1	NMD likely if extended
ENST00000329956.11	MANE_select
ENST00000393957.7	MANE_select
ENST00000564104.5	alternative 5' UTR
ENST00000290942.9	alternative 5' UTR
ENST00000562206.1	alternative 5' UTR
ENST00000565726.3	MANE_select
ENST00000326152.6	MANE_select
ENST00000290949.8	MANE_select
ENST00000656196.1	Assembled from SLRseq reads (SRP049776)
ENST00000659360.1	Assembled from SLRseq reads (SRP049776)
ENST00000653151.1	Assembled from SLRseq reads (SRP049776)
ENST00000290953.3	MANE_select
ENST00000621378.1	CAGE supported TSS
ENST00000562116.1	alternative 5' UTR
ENST00000562755.5	alternative 5' UTR
ENST00000379312.7	NP_001180451.1
ENST00000042381.9	MANE_select
ENST00000540839.7	NAGNAG splice site
ENST00000566907.1	alternative 5' UTR
ENST00000566920.5	alternative 5' UTR
ENST00000565176.5	alternative 5' UTR
ENST00000566559.5	alternative 5' UTR
ENST00000605277.1	not organism-supported
ENST00000646076.1	alternative 5' UTR
ENST00000644852.1	alternative 5' UTR
ENST00000264010.10	MANE_select
ENST00000264010.10	NP_006556.1
ENST00000401394.6	NP_001177951.1
ENST00000642847.1	alternative 5' UTR
ENST00000644753.1	alternative 5' UTR
ENST00000642819.1	alternative 5' UTR
ENST00000645306.1	alternative 5' UTR
ENST00000645699.1	alternative 5' UTR
ENST00000334583.11	MANE_select
ENST00000620761.6	CAGE supported TSS
ENST00000620761.6	LR annotation
ENST00000620761.6	MANE_select
ENST00000458121.7	MANE_select
ENST00000243878.9	MANE_select
ENST00000403458.9	MANE_select
ENST00000459925.1	FLJ41802
ENST00000602974.5	NMD likely if extended
ENST00000268797.12	MANE_select
ENST00000317506.8	MANE_select
ENST00000561639.6	MANE_select
ENST00000565558.1	NMD likely if extended
ENST00000562787.6	MANE_select
ENST00000562947.5	NMD likely if extended
ENST00000564538.5	NMD likely if extended
ENST00000561593.5	alternative 5' UTR
ENST00000565114.5	alternative 5' UTR
ENST00000567985.5	alternative 5' UTR
ENST00000303596.3	MANE_select
ENST00000219169.9	MANE_select
ENST00000567105.5	alternative 5' UTR
ENST00000569436.6	alternative 5' UTR
ENST00000568396.2	alternative 5' UTR
ENST00000358933.10	MANE_select
ENST00000339176.8	MANE_select
ENST00000291041.6	MANE_select
ENST00000574481.6	MANE_select
ENST00000576408.1	NMD likely if extended
ENST00000358514.9	MANE_select
ENST00000264005.10	MANE_select
ENST00000316341.8	MANE_select
ENST00000572010.5	NMD likely if extended
ENST00000268793.6	MANE_select
ENST00000574342.1	NMD likely if extended
ENST00000393847.6	MANE_select
ENST00000572888.5	alternative 5' UTR
ENST00000572624.5	alternative 5' UTR
ENST00000574865.1	alternative 5' UTR
ENST00000571081.6	alternative 5' UTR
ENST00000570709.6	alternative 5' UTR
ENST00000566306.5	alternative 5' UTR
ENST00000358896.10	alternative 5' UTR
ENST00000568099.6	alternative 5' UTR
ENST00000567100.5	alternative 5' UTR
ENST00000565263.6	MANE_select
ENST00000569289.5	alternative 5' UTR
ENST00000564781.1	alternative 5' UTR
ENST00000574912.1	MANE_select
ENST00000332395.7	MANE_select
ENST00000346183.8	MANE_select
ENST00000473183.7	MANE_select
ENST00000566774.1	NMD likely if extended
ENST00000219345.10	MANE_select
ENST00000648130.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648130.1	alternative 5' UTR
ENST00000219343.11	MANE_select
ENST00000566454.5	alternative 5' UTR
ENST00000568088.5	alternative 5' UTR
ENST00000564708.1	alternative 5' UTR
ENST00000562727.1	alternative 5' UTR
ENST00000563146.1	alternative 5' UTR
ENST00000568024.1	alternative 5' UTR
ENST00000568315.1	NMD likely if extended
ENST00000263997.11	MANE_select
ENST00000565745.5	alternative 5' UTR
ENST00000441236.3	CAGE supported TSS
ENST00000441236.3	MANE_select
ENST00000441236.3	alternative 5' UTR
ENST00000569571.5	alternative 5' UTR
ENST00000569047.7	alternative 5' UTR
ENST00000565983.5	alternative 5' UTR
ENST00000563562.5	NMD likely if extended
ENST00000219334.10	MANE_select
ENST00000561749.1	alternative 5' UTR
ENST00000666035.1	Assembled from SLRseq reads (SRP049776)
ENST00000576305.5	alternative 5' UTR
ENST00000571382.5	alternative 5' UTR
ENST00000562156.5	alternative 5' UTR
ENST00000573685.5	alternative 5' UTR
ENST00000563169.7	MANE_select
ENST00000563169.7	alternative 5' UTR
ENST00000264012.9	MANE_select
ENST00000261769.10	MANE_select
ENST00000261778.2	MANE_select
ENST00000569188.6	MANE_select
ENST00000569188.6	alternative 5' UTR
ENST00000566118.5	alternative 5' UTR
ENST00000448552.7	MANE_select
ENST00000448552.7	Merkle et al. (2003) PMID: 12766176
ENST00000398235.6	alternative 5' UTR
ENST00000314423.12	FLJ14728
ENST00000314423.12	MANE_select
ENST00000528525.1	NMD likely if extended
ENST00000254950.13	MANE_select
ENST00000306875.10	CAGE supported TSS
ENST00000306875.10	MANE_select
ENST00000306875.10	upstream ATG
ENST00000288022.2	MANE_select
ENST00000563364.3	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000254940.10	MANE_select
ENST00000288025.4	MANE_select
ENST00000254942.8	MANE_select
ENST00000566257.5	last exon non-canonical - clipped
ENST00000514123.5	upstream ATG
ENST00000307892.13	MANE_select
ENST00000307892.13	downstream ATG
ENST00000515314.6	downstream ATG
ENST00000561792.6	downstream ATG
ENST00000426654.6	NAGNAG splice site
ENST00000349945.7	CAGE supported TSS
ENST00000349945.7	LR annotation
ENST00000349945.7	MANE_select
ENST00000349945.7	NAGNAG splice site
ENST00000354436.6	NAGNAG splice site
ENST00000393742.7	NAGNAG splice site
ENST00000566899.6	NAGNAG splice site
ENST00000566899.6	alternative 3' UTR
ENST00000320623.10	MANE_select
ENST00000268802.10	MANE_select
ENST00000561780.5	alternative 5' UTR
ENST00000359154.7	MANE_select
ENST00000568684.1	CAGE supported TSS
ENST00000393701.6	alternative 5' UTR
ENST00000288050.9	MANE_select
ENST00000568530.5	alternative 5' UTR
ENST00000671539.1	Assembled from SLRseq reads (SRP049776)
ENST00000541793.7	MANE_select
ENST00000541793.7	alternative 5' UTR
ENST00000314151.12	alternative 5' UTR
ENST00000565806.5	alternative 5' UTR
ENST00000435634.3	MANE_select
ENST00000675643.1	alternative 5' UTR
ENST00000674963.1	alternative 5' UTR
ENST00000674691.1	alternative 5' UTR
ENST00000261772.13	MANE_select
ENST00000676211.1	alternative 5' UTR
ENST00000676040.1	alternative 5' UTR
ENST00000676209.1	alternative 3' UTR
ENST00000676168.1	alternative 3' UTR
ENST00000675751.1	alternative 3' UTR
ENST00000675297.1	alternative 3' UTR
ENST00000675371.1	NMD likely if extended
ENST00000563392.5	alternative 5' UTR
ENST00000570055.5	NMD likely if extended
ENST00000393657.6	alternative 5' UTR
ENST00000288071.11	MANE_select
ENST00000666089.1	Assembled from SLRseq reads (SRP049776)
ENST00000569244.6	NMD likely if extended
ENST00000302243.12	MANE_select
ENST00000650629.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000342907.3	MANE_select
ENST00000342907.3	genebuild_only_MANE
ENST00000572784.5	alternative 5' UTR
ENST00000574784.5	alternative 5' UTR
ENST00000288078.11	FLJ31894
ENST00000288078.11	MANE_select
ENST00000378912.6	FLJ46530
ENST00000573352.5	alternative 5' UTR
ENST00000576453.1	alternative 5' UTR
ENST00000485034.1	FLJ41476
ENST00000323786.10	MANE_select
ENST00000674443.1	upstream ATG
ENST00000564653.6	upstream ATG
ENST00000530160.2	upstream ATG
ENST00000524584.1	NMD likely if extended
ENST00000566095.6	alternative 5' UTR
ENST00000577085.1	alternative 5' UTR
ENST00000302516.10	MANE_select
ENST00000564899.1	alternative 5' UTR
ENST00000429149.6	alternative 5' UTR
ENST00000338779.11	MANE_select
ENST00000261776.10	FLJ31871
ENST00000261776.10	MANE_select
ENST00000566416.1	alternative exon 16
ENST00000398177.2	Assembled from SLRseq reads (SRP049776)
ENST00000662383.1	Assembled from SLRseq reads (SRP049776)
ENST00000666405.1	Assembled from SLRseq reads (SRP049776)
ENST00000393567.7	MANE_select
ENST00000378856.8	NMD likely if extended
ENST00000546257.1	NMD likely if extended
ENST00000538568.5	NMD likely if extended
ENST00000539447.5	NMD likely if extended
ENST00000321489.9	FLJ12871
ENST00000539973.5	alternative 5' UTR
ENST00000545267.1	alternative 5' UTR
ENST00000338099.9	FLJ11171
ENST00000434935.7	MANE_select
ENST00000434935.7	alternative 5' UTR
ENST00000563876.1	alternative 5' UTR
ENST00000564183.1	alternative 5' UTR
ENST00000565850.1	alternative 5' UTR
ENST00000567610.1	alternative 5' UTR
ENST00000568910.1	alternative 5' UTR
ENST00000666391.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000567721.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655293.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000302628.9	MANE_select
ENST00000567469.2	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000561754.4	CAGE supported TSS
ENST00000561754.4	MANE_select
ENST00000393539.6	alternative 5' UTR
ENST00000567340.1	alternative 5' UTR
ENST00000648971.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000288177.10	MANE_select
ENST00000564230.5	alternative 5' UTR
ENST00000568815.5	alternative 5' UTR
ENST00000564225.5	alternative 5' UTR
ENST00000566202.5	alternative 5' UTR
ENST00000569072.1	alternative 5' UTR
ENST00000539698.4	MANE_select
ENST00000539698.4	alternative 5' UTR
ENST00000656895.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666821.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670228.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000355962.5	MANE_select
ENST00000268485.8	MANE_select
ENST00000299952.4	FLJ32280
ENST00000568954.5	MANE_select
ENST00000567016.1	alternative 5' UTR
ENST00000299980.9	MANE_select
ENST00000563259.5	alternative 5' UTR
ENST00000569185.5	alternative 5' UTR
ENST00000567583.1	alternative 5' UTR
ENST00000569975.5	alternative 5' UTR
ENST00000570017.1	alternative 5' UTR
ENST00000427980.7	MANE_select
ENST00000568581.5	alternative 5' UTR
ENST00000540296.5	alternative 5' UTR
ENST00000538104.5	alternative 5' UTR
ENST00000424485.6	alternative 5' UTR
ENST00000378799.11	MANE_select
ENST00000541918.5	alternative 5' UTR
ENST00000534994.5	alternative 5' UTR
ENST00000539186.5	alternative 5' UTR
ENST00000536027.1	NMD likely if extended
ENST00000425432.6	MANE_select
ENST00000425432.6	genebuild_only_MANE
ENST00000568666.5	alternative 5' UTR
ENST00000565516.5	alternative 5' UTR
ENST00000565843.5	alternative 5' UTR
ENST00000568322.5	alternative 5' UTR
ENST00000219240.9	MANE_select
ENST00000219240.9	genebuild_only_MANE
ENST00000573922.5	NMD likely if extended
ENST00000268483.8	FLJ20511
ENST00000268483.8	MANE_select
ENST00000426362.6	alternative 5' UTR
ENST00000569767.1	alternative 5' UTR
ENST00000567185.3	NAGNAG splice site
ENST00000649683.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000540303.7	MANE_select
ENST00000566794.5	alternative 5' UTR
ENST00000268482.8	MANE_select
ENST00000566489.1	alternative 5' UTR
ENST00000237353.15	MANE_select
ENST00000535461.5	alternative 5' UTR
ENST00000539172.5	alternative 5' UTR
ENST00000543746.1	NMD likely if extended
ENST00000536211.5	alternative 5' UTR
ENST00000540440.1	alternative 5' UTR
ENST00000669279.1	Assembled from SLRseq reads (SRP049776)
ENST00000664779.1	Assembled from RACEseq reads
ENST00000661899.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000653104.1	Assembled from SLRseq reads (SRP049776)
ENST00000624829.4	Assembled from SLRseq reads (SRP049776)
ENST00000656218.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664155.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657725.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666555.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668081.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000570152.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662171.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655530.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659470.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668995.1	Assembled from SLRseq reads (SRP049776)
ENST00000653037.1	Assembled from SLRseq reads (SRP049776)
ENST00000268489.10	MANE_select
ENST00000397992.5	CAGE supported TSS
ENST00000641018.1	CAGE supported TSS
ENST00000662824.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659438.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647808.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000671224.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668007.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668007.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000665707.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000555721.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656216.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669193.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670919.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670932.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663851.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666626.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669634.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655534.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669648.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666218.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667695.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664807.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662417.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666029.1	Assembled from SLRseq reads (SRP049776)
ENST00000658533.1	Assembled from SLRseq reads (SRP049776)
ENST00000657089.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000565061.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650425.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000219313.9	MANE_select
ENST00000662467.1	Assembled from SLRseq reads (SRP049776)
ENST00000655599.1	Assembled from SLRseq reads (SRP049776)
ENST00000567148.2	Assembled from SLRseq reads (SRP049776)
ENST00000669286.1	Assembled from SLRseq reads (SRP049776)
ENST00000422840.7	MANE_select
ENST00000361070.9	MANE_select
ENST00000571750.5	alternative 5' UTR
ENST00000572990.5	alternative 5' UTR
ENST00000576652.1	alternative 5' UTR
ENST00000575113.1	alternative 5' UTR
ENST00000308807.12	MANE_select
ENST00000573267.1	alternative 5' UTR
ENST00000219368.8	MANE_select
ENST00000262144.11	MANE_select
ENST00000568462.5	NMD likely if extended
ENST00000568323.5	NMD likely if extended
ENST00000562331.5	NMD likely if extended
ENST00000335325.9	MANE_select
ENST00000567962.5	alternative 3' UTR
ENST00000450168.3	MANE_select
ENST00000569876.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000570010.6	MANE_select
ENST00000570010.6	alternative 5' UTR
ENST00000303037.13	MANE_select
ENST00000361017.9	MANE_select
ENST00000162330.10	MANE_select
ENST00000283882.4	MANE_select
ENST00000561887.1	NMD likely if extended
ENST00000621929.1	CAGE supported TSS
ENST00000561878.2	MANE_select
ENST00000332272.9	CAGE supported TSS
ENST00000332272.9	LR annotation
ENST00000332272.9	MANE_select
ENST00000258173.11	MANE_select
ENST00000258173.11	non canonical U12
ENST00000562410.5	non canonical U12
ENST00000568377.5	NP_001070884.2
ENST00000568377.5	non canonical U12
ENST00000564318.1	non canonical U12
ENST00000565067.5	non canonical U12
ENST00000570006.5	non canonical U12
ENST00000569294.1	non canonical U12
ENST00000564576.1	NMD likely if extended
ENST00000621911.1	CAGE supported TSS
ENST00000037243.7	MANE_select
ENST00000564657.2	CAGE supported TSS
ENST00000564657.2	MANE_select
ENST00000564657.2	alternative 5' UTR
ENST00000567281.5	alternative 5' UTR
ENST00000565109.5	NMD likely if extended
ENST00000562374.1	alternative 5' UTR
ENST00000302445.8	CAGE supported TSS
ENST00000302445.8	MANE_select
ENST00000570215.1	alternative 5' UTR
ENST00000300086.5	CAGE supported TSS
ENST00000300086.5	LR annotation
ENST00000300086.5	MANE_select
ENST00000633875.4	MANE_select
ENST00000640559.2	MANE_select
ENST00000657535.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000567477.1	NAGNAG splice site
ENST00000658559.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000568714.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657635.1	Assembled from SLRseq reads (SRP049776)
ENST00000611870.5	MANE_select
ENST00000569610.5	alternative 5' UTR
ENST00000567291.5	alternative 5' UTR
ENST00000563612.1	alternative 5' UTR
ENST00000563279.5	alternative 5' UTR
ENST00000248248.8	MANE_select
ENST00000378644.5	MANE_select
ENST00000648730.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000282849.10	MANE_select
ENST00000670344.1	Assembled from SLRseq reads (SRP049776)
ENST00000659510.1	Assembled from SLRseq reads (SRP049776)
ENST00000658875.1	Assembled from SLRseq reads (SRP049776)
ENST00000268533.9	MANE_select
ENST00000648858.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000302536.3	MANE_select
ENST00000299642.10	MANE_select
ENST00000299642.10	upstream ATG
ENST00000566780.6	MANE_select
ENST00000539474.6	confirm experimentally
ENST00000664344.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666211.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669173.1	Assembled from SLRseq reads (SRP049776)
ENST00000655872.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649926.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000569649.1	not organism-supported
ENST00000326043.5	MANE_select
ENST00000661087.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000569164.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658367.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653222.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663559.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668311.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660877.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664812.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663905.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658021.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660492.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000563360.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668552.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670230.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667860.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669736.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658102.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669642.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660867.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669947.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668170.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669543.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665206.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668897.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665592.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653629.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666087.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664391.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663824.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656256.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667006.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668234.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665091.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661887.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654126.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654418.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654418.1	Assembled from SLRseq reads (SRP049776)
ENST00000669552.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664722.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671582.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670441.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000562921.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668946.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658463.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654454.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657613.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670969.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000567993.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669528.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662553.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000566729.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668341.1	Assembled from SLRseq reads (SRP049776)
ENST00000666474.1	Assembled from SLRseq reads (SRP049776)
ENST00000663853.1	Assembled from SLRseq reads (SRP049776)
ENST00000658726.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000305904.11	MANE_select
ENST00000652792.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663414.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666768.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660108.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663234.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000567317.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664145.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654863.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670104.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654679.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000565215.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656480.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000561634.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662243.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000562002.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000570137.7	MANE_select
ENST00000652621.1	alternative 3' UTR
ENST00000652621.1	alternative 5' UTR
ENST00000651816.1	alternative 3' UTR
ENST00000651816.1	alternative 5' UTR
ENST00000219400.8	MANE_select
ENST00000219400.8	upstream ATG
ENST00000564249.5	alternative 5' UTR
ENST00000565650.5	alternative 5' UTR
ENST00000568228.5	upstream ATG
ENST00000565914.5	alternative 5' UTR
ENST00000565108.5	alternative 5' UTR
ENST00000305850.10	MANE_select
ENST00000564669.5	alternative 5' UTR
ENST00000649061.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000299575.5	MANE_select
ENST00000299578.10	MANE_select
ENST00000565253.1	alternative 5' UTR
ENST00000315467.9	MANE_select
ENST00000525539.5	non canonical polymorphism
ENST00000662219.1	Assembled from SLRseq reads (SRP049776)
ENST00000258168.7	MANE_select
ENST00000648994.2	LR annotation
ENST00000648994.2	MANE_select
ENST00000537098.8	MANE_select
ENST00000398040.8	upstream ATG
ENST00000565054.5	alternative 5' UTR
ENST00000564138.6	MANE_select
ENST00000328945.7	MANE_select
ENST00000199936.9	MANE_select
ENST00000568090.5	alternative 5' UTR
ENST00000258169.9	MANE_select
ENST00000650164.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000565374.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000567109.6	MANE_select
ENST00000656814.1	Assembled from SLRseq reads (SRP049776)
ENST00000570056.2	Assembled from SLRseq reads (SRP049776)
ENST00000563981.6	Assembled from SLRseq reads (SRP049776)
ENST00000669198.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664525.1	Assembled from SLRseq reads (SRP049776)
ENST00000654587.1	Assembled from SLRseq reads (SRP049776)
ENST00000670287.1	Assembled from SLRseq reads (SRP049776)
ENST00000667932.1	Assembled from RACEseq reads
ENST00000561599.2	Assembled from SLRseq reads (SRP049776)
ENST00000666360.1	Assembled from SLRseq reads (SRP049776)
ENST00000433866.7	MANE_select
ENST00000570259.1	alternative 3' UTR
ENST00000262430.6	MANE_select
ENST00000361711.7	alternative 5' UTR
ENST00000393306.6	MANE_select
ENST00000299709.8	MANE_select
ENST00000299709.8	confirm experimentally
ENST00000299709.8	upstream ATG
ENST00000568178.1	alternative 5' UTR
ENST00000647688.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000343411.8	MANE_select
ENST00000569770.5	NMD likely if extended
ENST00000219439.9	MANE_select
ENST00000565275.1	alternative 3' UTR
ENST00000568857.5	alternative 5' UTR
ENST00000562224.1	alternative 5' UTR
ENST00000564998.1	alternative 5' UTR
ENST00000378553.10	MANE_select
ENST00000566732.6	MANE_select
ENST00000564345.5	alternative 5' UTR
ENST00000315906.10	MANE_select
ENST00000561900.1	NAGNAG splice site
ENST00000568638.1	alternative 3' UTR
ENST00000219454.10	MANE_select
ENST00000262429.9	MANE_select
ENST00000343629.11	MANE_select
ENST00000343629.11	upstream ATG
ENST00000561807.5	NMD likely if extended
ENST00000565079.5	alternative 5' UTR
ENST00000562447.5	alternative 5' UTR
ENST00000565765.1	alternative 5' UTR
ENST00000262428.5	MANE_select
ENST00000564996.6	MANE_select
ENST00000567410.5	alternative 5' UTR
ENST00000569472.5	alternative 5' UTR
ENST00000565743.1	alternative 5' UTR
ENST00000219473.12	MANE_select
ENST00000219473.12	upstream ATG
ENST00000648152.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000566151.1	alternative 5' UTR
ENST00000262424.10	MANE_select
ENST00000567845.5	NAGNAG splice site
ENST00000625056.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000313732.9	MANE_select
ENST00000569488.1	NMD likely if extended
ENST00000569017.1	alternative 5' UTR
ENST00000539556.6	MANE_select
ENST00000253458.12	MANE_select
ENST00000469381.1	FLJ45416
ENST00000438180.1	FLJ98653
ENST00000653746.1	Assembled from SLRseq reads (SRP049776)
ENST00000653751.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000253462.8	MANE_select
ENST00000602583.5	alternative 5' UTR
ENST00000602675.5	alternative 5' UTR
ENST00000284245.9	MANE_select
ENST00000655120.1	Assembled from SLRseq reads (SRP049776)
ENST00000253457.8	MANE_select
ENST00000565078.5	alternative 5' UTR
ENST00000562336.5	alternative 5' UTR
ENST00000253452.8	MANE_select
ENST00000561569.5	alternative 5' UTR
ENST00000562929.1	NMD likely if extended
ENST00000665365.1	Assembled from SLRseq reads (SRP049776)
ENST00000268638.10	MANE_select
ENST00000565552.1	alternative 5' UTR
ENST00000564617.5	alternative 5' UTR
ENST00000564803.5	alternative 5' UTR
ENST00000569145.5	alternative 5' UTR
ENST00000569607.1	alternative 5' UTR
ENST00000646214.1	CAGE supported TSS
ENST00000669926.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650200.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000654153.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667546.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000602425.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000656382.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651755.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000656700.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670118.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000595169.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664042.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655731.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654235.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660779.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655979.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669859.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000599619.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000598994.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659545.1	Assembled from SLRseq reads (SRP049776)
ENST00000671115.1	Assembled from SLRseq reads (SRP049776)
ENST00000669311.1	Assembled from SLRseq reads (SRP049776)
ENST00000262426.6	MANE_select
ENST00000360900.11	MANE_select
ENST00000543303.6	NAGNAG splice site
ENST00000649859.1	CAGE supported TSS
ENST00000649859.1	LR annotation
ENST00000649859.1	MANE_select
ENST00000593625.1	alternative 5' UTR
ENST00000320241.5	MANE_select
ENST00000661967.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652314.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000667097.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660139.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653342.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659949.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658013.1	Assembled from SLRseq reads (SRP049776)
ENST00000670133.1	Assembled from SLRseq reads (SRP049776)
ENST00000666349.1	Assembled from SLRseq reads (SRP049776)
ENST00000664021.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000567970.2	MANE_select
ENST00000648601.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000311635.12	MANE_select
ENST00000650688.1	CAGE supported TSS
ENST00000650688.1	align_id:3611660|asmbl_101825
ENST00000650688.1	alternative 5' UTR
ENST00000650688.1	long_read_pipeline_2
ENST00000268607.10	MANE_select
ENST00000671377.2	CAGE supported TSS
ENST00000671377.2	MANE_select
ENST00000657113.1	Assembled from SLRseq reads (SRP049776)
ENST00000602388.1	FLJ40360
ENST00000284262.3	MANE_select
ENST00000567298.5	non canonical TEC
ENST00000316853.10	NAGNAG splice site
ENST00000353170.9	NAGNAG splice site
ENST00000270583.10	MANE_select
ENST00000658015.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668490.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000261622.5	MANE_select
ENST00000649794.3	LR annotation
ENST00000649794.3	MANE_select
ENST00000423252.5	alternative 5' UTR
ENST00000439677.5	alternative 5' UTR
ENST00000393208.6	non canonical conserved
ENST00000626016.2	non canonical conserved
ENST00000355022.8	non canonical conserved
ENST00000436970.5	alternative 5' UTR
ENST00000436274.5	alternative 5' UTR
ENST00000456902.5	alternative 5' UTR
ENST00000566155.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661363.1	Assembled from SLRseq reads (SRP049776)
ENST00000562705.2	Assembled from SLRseq reads (SRP049776)
ENST00000665557.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000565624.3	CAGE supported TSS
ENST00000565624.3	MANE_select
ENST00000565624.3	PMID: 18452888
ENST00000565624.3	confirm experimentally
ENST00000319555.8	MANE_select
ENST00000301011.10	MANE_select
ENST00000565583.1	alternative 3' UTR
ENST00000244241.5	MANE_select
ENST00000261623.8	MANE_select
ENST00000301012.8	MANE_select
ENST00000568709.5	NMD likely if extended
ENST00000565720.1	NMD likely if extended
ENST00000563261.6	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000669434.1	Assembled from SLRseq reads (SRP049776)
ENST00000563475.2	Assembled from SLRseq reads (SRP049776)
ENST00000654033.1	Assembled from SLRseq reads (SRP049776)
ENST00000661704.1	Assembled from SLRseq reads (SRP049776)
ENST00000661622.1	Assembled from SLRseq reads (SRP049776)
ENST00000663493.1	Assembled from SLRseq reads (SRP049776)
ENST00000332281.6	MANE_select
ENST00000312838.9	MANE_select
ENST00000537718.6	alternative 5' UTR
ENST00000541206.6	NP_001165287.1
ENST00000567844.1	NP_001165286.1
ENST00000312060.9	NP_001012780
ENST00000453996.7	MANE_select
ENST00000301015.14	LR annotation
ENST00000301015.14	MANE_select
ENST00000518793.6	alternative 3' UTR
ENST00000301019.9	MANE_select
ENST00000378364.8	MANE_select
ENST00000426324.6	NP_001025189
ENST00000567391.5	alternative 3' UTR
ENST00000268695.10	MANE_select
ENST00000564404.5	alternative 3' UTR
ENST00000268679.9	MANE_select
ENST00000569443.5	alternative 5' UTR
ENST00000562719.5	alternative 5' UTR
ENST00000564416.1	alternative 5' UTR
ENST00000669920.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000537895.5	alternative 5' UTR
ENST00000614302.5	MANE_select
ENST00000614302.5	alternative 5' UTR
ENST00000537290.5	alternative 5' UTR
ENST00000540697.5	alternative 5' UTR
ENST00000406948.7	alternative 5' UTR
ENST00000541755.2	alternative 5' UTR
ENST00000649953.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000544543.5	alternative 5' UTR
ENST00000562204.1	NMD likely if extended
ENST00000289746.3	MANE_select
ENST00000562855.7	confirm experimentally
ENST00000570267.2	CAGE supported TSS
ENST00000433976.7	CAGE supported TSS
ENST00000433976.7	MANE_select
ENST00000564906.5	alternative 5' UTR
ENST00000378330.7	alternative 5' UTR
ENST00000301030.10	MANE_select
ENST00000330736.10	NAGNAG splice site
ENST00000330736.10	alternative 3' UTR
ENST00000642600.1	NAGNAG splice site
ENST00000642600.1	alternative 5' UTR
ENST00000567699.2	NMD likely if extended
ENST00000562275.6	NAGNAG splice site
ENST00000644784.1	NAGNAG splice site
ENST00000644784.1	alternative 5' UTR
ENST00000642695.1	alternative 5' UTR
ENST00000643964.1	alternative 5' UTR
ENST00000646838.1	NAGNAG splice site
ENST00000642333.1	NAGNAG splice site
ENST00000642333.1	alternative 5' UTR
ENST00000645844.1	NMD likely if extended
ENST00000562816.5	NAGNAG splice site
ENST00000562816.5	NMD likely if extended
ENST00000567736.6	NAGNAG splice site
ENST00000647238.1	alternative 5' UTR
ENST00000568924.1	alternative 3' UTR
ENST00000563291.1	NAGNAG splice site
ENST00000563291.1	alternative 5' UTR
ENST00000566858.5	NAGNAG splice site
ENST00000566858.5	alternative 5' UTR
ENST00000564394.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000671638.1	Assembled from SLRseq reads (SRP049776)
ENST00000657156.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000643724.1	alternative 3' UTR
ENST00000645042.1	alternative 3' UTR
ENST00000646531.1	alternative 3' UTR
ENST00000646263.1	alternative 3' UTR
ENST00000645818.2	MANE_select
ENST00000642436.1	NMD likely if extended
ENST00000644210.1	alternative 3' UTR
ENST00000643105.1	alternative 3' UTR
ENST00000645354.1	alternative 3' UTR
ENST00000642334.1	alternative 3' UTR
ENST00000646399.1	alternative 3' UTR
ENST00000643178.1	NMD likely if extended
ENST00000645886.1	alternative 3' UTR
ENST00000645258.1	alternative 3' UTR
ENST00000644044.1	alternative 3' UTR
ENST00000569820.6	alternative 3' UTR
ENST00000565310.1	non canonical conserved
ENST00000567815.5	alternative 5' UTR
ENST00000311528.10	MANE_select
ENST00000467736.5	alternative 5' UTR
ENST00000393099.3	alternative 5' UTR
ENST00000319518.13	MANE_select
ENST00000570029.5	alternative 5' UTR
ENST00000568281.5	alternative 5' UTR
ENST00000393092.7	alternative 5' UTR
ENST00000397901.8	MANE_select
ENST00000547614.5	NMD likely if extended
ENST00000566204.2	NP_001258838.1
ENST00000615131.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000353379.12	MANE_select
ENST00000289805.10	MANE_select
ENST00000569918.1	alternative 5' UTR
ENST00000561976.5	non canonical conserved
ENST00000389386.8	MANE_select
ENST00000389386.8	non canonical conserved
ENST00000565023.1	NAGNAG splice site
ENST00000568691.5	non canonical conserved
ENST00000567379.5	non canonical conserved
ENST00000563798.1	non canonical conserved
ENST00000443381.7	MANE_select
ENST00000389301.8	MANE_select
ENST00000378247.8	MANE_select
ENST00000263346.13	MANE_select
ENST00000555147.2	MANE_select
ENST00000555147.2	upstream uORF
ENST00000555810.5	alternative 5' UTR
ENST00000556565.5	alternative 5' UTR
ENST00000315491.12	MANE_select
ENST00000563594.6	MANE_select
ENST00000568662.2	CAGE supported TSS
ENST00000002501.11	MANE_select
ENST00000268699.9	MANE_select
ENST00000449207.8	MANE_select
ENST00000660322.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660047.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663989.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660257.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000660257.1	Assembled from SLRseq reads (SRP049776)
ENST00000667258.1	Assembled from SLRseq reads (SRP049776)
ENST00000568947.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663757.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669853.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668039.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658135.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663101.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000569162.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665776.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668099.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668099.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000656587.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000568739.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000613549.3	MANE_select
ENST00000331302.12	MANE_select
ENST00000536489.6	alternative 5' UTR
ENST00000576420.5	alternative 5' UTR
ENST00000577079.5	alternative 5' UTR
ENST00000574722.5	alternative 5' UTR
ENST00000570638.5	alternative 5' UTR
ENST00000573780.5	alternative 5' UTR
ENST00000575736.5	alternative 5' UTR
ENST00000575130.5	alternative 5' UTR
ENST00000575634.5	alternative 5' UTR
ENST00000573588.5	alternative 5' UTR
ENST00000573448.1	alternative 5' UTR
ENST00000662387.1	Assembled from SLRseq reads (SRP049776)
ENST00000360127.7	MANE_select
ENST00000681160.1	CAGE supported TSS
ENST00000437048.7	MANE_select
ENST00000437048.7	NP_001121631.1
ENST00000680465.1	alternative 3' UTR
ENST00000681661.1	alternative 3' UTR
ENST00000681050.1	alternative 3' UTR
ENST00000681510.1	CAGE supported TSS
ENST00000680641.1	alternative 3' UTR
ENST00000576149.5	CAGE supported TSS
ENST00000576149.5	QC splicing correct
ENST00000681858.1	CAGE supported TSS
ENST00000681103.1	CAGE supported TSS
ENST00000571805.6	NP_001353182.1
ENST00000291074.10	NP_060759.2
ENST00000679817.1	CAGE supported TSS
ENST00000572334.7	CAGE supported TSS
ENST00000572334.7	alternative 5' UTR
ENST00000681120.1	CAGE supported TSS
ENST00000308278.13	MANE_select
ENST00000319004.6	MANE_select
ENST00000304478.9	MANE_select
ENST00000336868.8	MANE_select
ENST00000575801.5	NP_001192248.1
ENST00000327158.5	MANE_select
ENST00000544583.6	alternative 5' UTR
ENST00000575934.5	alternative 5' UTR
ENST00000574139.6	alternative 5' UTR
ENST00000570525.5	alternative 5' UTR
ENST00000574266.1	alternative 5' UTR
ENST00000391429.2	MANE_select
ENST00000333813.4	MANE_select
ENST00000264335.13	MANE_select
ENST00000571732.5	QC splicing correct
ENST00000300574.3	MANE_select
ENST00000574295.1	not organism-supported
ENST00000648446.1	CAGE supported TSS
ENST00000648446.1	LR annotation
ENST00000648651.1	CAGE supported TSS
ENST00000648651.1	LR annotation
ENST00000648651.1	MANE_select
ENST00000361007.7	alternative 5' UTR
ENST00000646049.1	alternative 5' UTR
ENST00000570984.7	alternative 5' UTR
ENST00000573853.5	alternative 5' UTR
ENST00000575335.5	alternative 5' UTR
ENST00000421807.7	MANE_select
ENST00000406424.8	alternative 5' UTR
ENST00000571274.5	alternative 5' UTR
ENST00000313486.12	MANE_select
ENST00000301335.10	MANE_select
ENST00000571650.5	alternative 5' UTR
ENST00000263071.9	MANE_select
ENST00000571272.5	NP_663325.1
ENST00000301336.7	MANE_select
ENST00000304992.11	MANE_select
ENST00000572621.5	alternative 5' UTR
ENST00000575116.1	NMD likely if extended
ENST00000577001.1	QC splicing correct
ENST00000577001.1	alternative 5' UTR
ENST00000615078.1	CAGE supported TSS
ENST00000330676.8	MANE_select
ENST00000330676.8	confirm experimentally
ENST00000419248.5	NP_001157283.1
ENST00000409644.6	MANE_select
ENST00000409644.6	NP_001157281.1
ENST00000450523.6	NP_001159393.1
ENST00000453066.6	CAGE supported TSS
ENST00000453066.6	MANE_select
ENST00000453066.6	alternative 5' UTR
ENST00000254722.9	MANE_select
ENST00000571149.5	alternative 5' UTR
ENST00000570731.5	alternative 5' UTR
ENST00000577053.1	alternative 5' UTR
ENST00000305513.12	MANE_select
ENST00000570368.5	alternative 5' UTR
ENST00000571854.5	QC splicing correct
ENST00000571854.5	alternative 5' UTR
ENST00000254719.10	MANE_select
ENST00000331238.7	MANE_select
ENST00000670164.1	Assembled from SLRseq reads (SRP049776)
ENST00000263083.12	MANE_select
ENST00000263083.12	upstream ATG
ENST00000571418.7	upstream ATG
ENST00000570477.6	upstream ATG
ENST00000571710.6	alternative 3' UTR
ENST00000607788.2	alternative 3' UTR
ENST00000670012.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000572195.3	CAGE supported TSS
ENST00000572195.3	MANE_select
ENST00000574370.1	alternative 5' UTR
ENST00000571875.2	alternative 5' UTR
ENST00000571990.1	alternative 5' UTR
ENST00000619757.5	MANE_select
ENST00000576444.1	alternative 5' UTR
ENST00000263073.11	MANE_select
ENST00000536871.6	alternative 5' UTR
ENST00000575454.1	CAGE supported TSS
ENST00000572369.5	alternative 5' UTR
ENST00000575176.5	alternative 5' UTR
ENST00000571442.5	alternative 5' UTR
ENST00000570659.5	alternative 5' UTR
ENST00000575663.5	alternative 5' UTR
ENST00000570606.5	alternative 5' UTR
ENST00000570668.1	alternative 5' UTR
ENST00000572709.5	alternative 5' UTR
ENST00000575840.5	alternative 5' UTR
ENST00000344595.10	MANE_select
ENST00000570662.2	alternative 5' UTR
ENST00000574229.1	alternative 5' UTR
ENST00000301364.10	MANE_select
ENST00000268989.8	MANE_select
ENST00000574290.1	QC splicing correct
ENST00000174618.5	MANE_select
ENST00000263092.11	MANE_select
ENST00000576586.5	alternative 5' UTR
ENST00000397195.10	MANE_select
ENST00000675621.1	align_id:1318837|asmbl_38740
ENST00000574426.7	CAGE supported TSS
ENST00000574426.7	NAGNAG splice site
ENST00000574426.7	QC splicing correct
ENST00000651024.2	MANE_select
ENST00000575014.5	NAGNAG splice site
ENST00000576885.5	alternative 5' UTR
ENST00000576309.5	alternative 5' UTR
ENST00000571566.1	alternative 5' UTR
ENST00000540393.6	QC splicing correct
ENST00000366401.8	QC splicing correct
ENST00000254695.13	MANE_select
ENST00000254695.13	QC splicing correct
ENST00000574515.1	NMD likely if extended
ENST00000575751.1	MANE_select
ENST00000641064.1	ENA ID EGAS00001001486
ENST00000641833.1	ENA ID EGAS00001001486
ENST00000641833.1	MANE_select
ENST00000641833.1	alternative 5' UTR
ENST00000642014.1	ENA ID EGAS00001001486
ENST00000641322.1	ENA ID EGAS00001001486
ENST00000641732.1	ENA ID EGAS00001001486
ENST00000641732.1	alternative 5' UTR
ENST00000531680.2	ENA ID EGAS00001001486
ENST00000642052.1	ENA ID EGAS00001001486
ENST00000642052.1	NCBI GEO ID GSE80249
ENST00000573491.5	alternative 5' UTR
ENST00000576166.2	alternative 5' UTR
ENST00000323404.2	MANE_select
ENST00000323404.2	NCBI GEO ID GSE80249
ENST00000323404.2	logan
ENST00000322608.2	MANE_select
ENST00000248384.1	MANE_select
ENST00000397168.7	alternative 5' UTR
ENST00000572969.6	MANE_select
ENST00000572969.6	alternative 5' UTR
ENST00000573128.5	alternative 5' UTR
ENST00000541913.5	alternative 5' UTR
ENST00000572582.5	alternative 5' UTR
ENST00000571607.1	QC splicing correct
ENST00000574457.1	upstream uORF
ENST00000570318.1	alternative 5' UTR
ENST00000577034.1	alternative 5' UTR
ENST00000456349.6	alternative 5' UTR
ENST00000263080.3	MANE_select
ENST00000576742.6	MANE_select
ENST00000301365.8	NAGNAG splice site
ENST00000573539.5	NAGNAG splice site
ENST00000399759.7	alternative 5' UTR
ENST00000572705.1	alternative 5' UTR
ENST00000650505.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000650505.1	upstream uORF
ENST00000399756.8	alternative 5' UTR
ENST00000576351.5	QC splicing correct
ENST00000573568.1	QC splicing correct
ENST00000572919.1	not organism-supported
ENST00000225519.5	MANE_select
ENST00000673965.1	alternative 5' UTR
ENST00000381870.8	CAGE supported TSS
ENST00000381870.8	LR annotation
ENST00000452111.5	alternative 5' UTR
ENST00000046640.9	CAGE supported TSS
ENST00000046640.9	LR annotation
ENST00000046640.9	MANE_select
ENST00000576979.1	alternative 5' UTR
ENST00000225525.4	MANE_select
ENST00000248378.6	MANE_select
ENST00000397133.2	alternative 5' UTR
ENST00000552276.5	NAGNAG splice site
ENST00000551178.5	NAGNAG splice site
ENST00000547178.5	NAGNAG splice site
ENST00000225328.10	MANE_select
ENST00000263087.9	MANE_select
ENST00000263087.9	upstream ATG
ENST00000325418.5	MANE_select
ENST00000389005.6	MANE_select
ENST00000348335.7	MANE_select
ENST00000225538.4	MANE_select
ENST00000397041.8	MANE_select
ENST00000359983.7	NP_777613.1
ENST00000381638.7	MANE_select
ENST00000577075.6	alternative 5' UTR
ENST00000301391.8	MANE_select
ENST00000341657.9	MANE_select
ENST00000648043.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000575298.1	QC splicing correct
ENST00000355530.7	MANE_select
ENST00000576069.5	NMD likely if extended
ENST00000576069.5	QC splicing correct
ENST00000329078.8	MANE_select
ENST00000254718.9	MANE_select
ENST00000381550.8	MANE_select
ENST00000389313.9	MANE_select
ENST00000572951.1	QC splicing correct
ENST00000293761.8	CAGE supported TSS
ENST00000293761.8	MANE_select
ENST00000570836.6	alternative 5' UTR
ENST00000576572.1	QC splicing correct
ENST00000572293.7	MANE_select
ENST00000572293.7	upstream ATG
ENST00000574876.5	CAGE supported TSS
ENST00000570823.5	NMD likely if extended
ENST00000269260.7	MANE_select
ENST00000293777.6	MANE_select
ENST00000674339.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000576153.5	CAGE supported TSS
ENST00000574412.6	alternative 3' UTR
ENST00000574412.6	upstream ATG
ENST00000575168.1	CAGE supported TSS
ENST00000433935.6	MANE_select
ENST00000270560.4	MANE_select
ENST00000328739.6	MANE_select
ENST00000331264.8	MANE_select
ENST00000270586.8	MANE_select
ENST00000263088.11	MANE_select
ENST00000575316.1	alternative 5' UTR
ENST00000355280.11	MANE_select
ENST00000649488.2	CAGE supported TSS
ENST00000649488.2	LR annotation
ENST00000649488.2	MANE_select
ENST00000572438.1	not organism-supported
ENST00000649830.1	CAGE supported TSS
ENST00000575637.1	NMD likely if extended
ENST00000381365.4	MANE_select
ENST00000381365.4	NP_001139008.1
ENST00000329125.6	MANE_select
ENST00000225665.12	MANE_select
ENST00000544061.6	NP_001158890.1
ENST00000571816.5	alternative 5' UTR
ENST00000573404.5	alternative 5' UTR
ENST00000576452.5	alternative 5' UTR
ENST00000572430.5	alternative 5' UTR
ENST00000262482.11	MANE_select
ENST00000575111.5	alternative 5' UTR
ENST00000570492.5	NMD likely if extended
ENST00000225655.6	MANE_select
ENST00000522798.5	alternative 5' UTR
ENST00000522249.5	alternative 5' UTR
ENST00000519584.5	NP_001180432.1
ENST00000519602.6	MANE_select
ENST00000519602.6	alternative 5' UTR
ENST00000518175.1	alternative 5' UTR
ENST00000206020.8	MANE_select
ENST00000414043.7	NP_001164638.1
ENST00000348066.8	MANE_select
ENST00000572326.1	NMD likely if extended
ENST00000355025.7	alternative 5' UTR
ENST00000574617.1	alternative 5' UTR
ENST00000320785.10	MANE_select
ENST00000574165.1	alternative 5' UTR
ENST00000572959.1	QC splicing correct
ENST00000254853.10	LR annotation
ENST00000254853.10	MANE_select
ENST00000318833.4	MANE_select
ENST00000575538.1	alternative 3' UTR
ENST00000665679.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000574788.6	MANE_select
ENST00000574788.6	alternative 5' UTR
ENST00000575779.2	MANE_select
ENST00000399604.4	alternative 5' UTR
ENST00000576772.1	alternative 5' UTR
ENST00000669386.1	Assembled from SLRseq reads (SRP049776)
ENST00000671211.1	Assembled from SLRseq reads (SRP049776)
ENST00000663434.1	Assembled from SLRseq reads (SRP049776)
ENST00000667038.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000649359.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000656594.1	Assembled from SLRseq reads (SRP049776)
ENST00000573772.2	Assembled from SLRseq reads (SRP049776)
ENST00000574081.6	CCDS42242.1
ENST00000574081.6	MANE_select
ENST00000575056.1	QC splicing correct
ENST00000537505.6	MANE_select
ENST00000573584.6	MANE_select
ENST00000572019.1	NMD likely if extended
ENST00000572792.1	QC splicing correct
ENST00000327154.10	NP_001153738.1
ENST00000381209.8	MANE_select
ENST00000405578.8	NP_001153715.1
ENST00000574003.1	NMD likely if extended
ENST00000575890.1	QC splicing correct
ENST00000225698.8	MANE_select
ENST00000570805.1	alternative 5' UTR
ENST00000576122.1	alternative 5' UTR
ENST00000225296.8	MANE_select
ENST00000158771.9	MANE_select
ENST00000576988.1	alternative 5' UTR
ENST00000576570.5	alternative 5' UTR
ENST00000573759.1	alternative 5' UTR
ENST00000611091.5	MANE_select
ENST00000611091.5	alternative 5' UTR
ENST00000568641.2	CAGE supported TSS
ENST00000568641.2	MANE_select
ENST00000262467.10	NP_001028225.1
ENST00000572272.6	MANE_select
ENST00000571451.6	alternative 5' UTR
ENST00000576905.5	alternative 5' UTR
ENST00000669214.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000563763.5	CAGE supported TSS
ENST00000573619.1	CAGE supported TSS
ENST00000576083.5	alternative 5' UTR
ENST00000574232.5	alternative 5' UTR
ENST00000571973.1	alternative 5' UTR
ENST00000576233.1	alternative 5' UTR
ENST00000664051.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000573698.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649660.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000381129.8	MANE_select
ENST00000250087.9	NP_001028226.1
ENST00000576307.5	NP_001028227.1
ENST00000570337.6	alternative 3' UTR
ENST00000572447.6	MANE_select
ENST00000576056.5	alternative 3' UTR
ENST00000571572.2	alternative 3' UTR
ENST00000262483.13	MANE_select
ENST00000361413.8	MANE_select
ENST00000571642.5	alternative 5' UTR
ENST00000634965.2	CAGE supported TSS
ENST00000634965.2	NMD exception
ENST00000250101.10	MANE_select
ENST00000225728.8	MANE_select
ENST00000542475.3	MANE_select
ENST00000433363.7	MANE_select
ENST00000573648.5	NP_001137310.1
ENST00000576323.1	NMD likely if extended
ENST00000574394.5	alternative 5' UTR
ENST00000361842.8	MANE_select
ENST00000321535.5	MANE_select
ENST00000338694.7	MANE_select
ENST00000667870.1	Assembled from SLRseq reads (SRP049776)
ENST00000653385.1	Assembled from SLRseq reads (SRP049776)
ENST00000659173.1	Assembled from SLRseq reads (SRP049776)
ENST00000659418.1	Assembled from SLRseq reads (SRP049776)
ENST00000575727.5	alternative 3' UTR
ENST00000654550.1	Assembled from SLRseq reads (SRP049776)
ENST00000666062.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000251535.11	MANE_select
ENST00000546495.5	NP_001136270.1
ENST00000552402.5	NP_00113627.1
ENST00000439424.6	MANE_select
ENST00000293805.10	MANE_select
ENST00000572216.1	NMD likely if extended
ENST00000576705.1	alternative 5' UTR
ENST00000573503.1	alternative 5' UTR
ENST00000308027.7	MANE_select
ENST00000662352.3	upstream ATG
ENST00000574600.3	MANE_select
ENST00000416562.7	MANE_select
ENST00000446679.6	NP_550436.1
ENST00000574868.1	alternative 5' UTR
ENST00000269299.8	MANE_select
ENST00000574388.5	NP_001184145.1
ENST00000573083.1	alternative 5' UTR
ENST00000399506.9	CAGE supported TSS
ENST00000399506.9	LR annotation
ENST00000399506.9	MANE_select
ENST00000399506.9	Non-canonical splicing between exon 3 and exon 4
ENST00000399506.9	non canonical conserved
ENST00000399510.8	CAGE supported TSS
ENST00000399510.8	LR annotation
ENST00000399510.8	NP_001308003.1
ENST00000648172.8	Non-canonical splicing between exon 5 and exon 6
ENST00000648172.8	non canonical conserved
ENST00000649520.1	CAGE supported TSS
ENST00000649520.1	Non-canonical splicing between exon 2 and exon 3
ENST00000649520.1	alternative 5' UTR
ENST00000649520.1	non canonical conserved
ENST00000491753.2	Non-canonical splicing between exon 5 and exon 6
ENST00000491753.2	non canonical conserved
ENST00000648707.1	Non-canonical splicing between exon 3 and exon 4
ENST00000648707.1	non canonical conserved
ENST00000649971.1	CAGE supported TSS
ENST00000649186.1	CAGE supported TSS
ENST00000649186.1	NP_001308005.1
ENST00000648896.1	CAGE supported TSS
ENST00000648896.1	Non-canonical splicing between exon 3 and exon 4
ENST00000648896.1	non canonical conserved
ENST00000650120.1	CAGE supported TSS
ENST00000650120.1	alternative 5' UTR
ENST00000648263.1	CAGE supported TSS
ENST00000648263.1	Non-canonical splicing between exon 2 and exon 3
ENST00000648263.1	alternative 5' UTR
ENST00000648263.1	non canonical conserved
ENST00000451807.7	CAGE supported TSS
ENST00000451807.7	Non-canonical splicing between exon 2 and exon 3
ENST00000451807.7	non canonical conserved
ENST00000647975.1	Non-canonical splicing between exon 2 and exon 3
ENST00000647975.1	non canonical conserved
ENST00000486626.8	CAGE supported TSS
ENST00000486626.8	alternative 5' UTR
ENST00000493294.2	CAGE supported TSS
ENST00000648658.1	CAGE supported TSS
ENST00000648658.1	Non-canonical splicing between exon 3 and exon 4
ENST00000648658.1	non canonical conserved
ENST00000648760.1	CAGE supported TSS
ENST00000648760.1	Non-canonical splicing between exon 2 and exon 3
ENST00000648760.1	alternative 5' UTR
ENST00000648760.1	non canonical conserved
ENST00000650301.1	CAGE supported TSS
ENST00000650301.1	Non-canonical splicing between exon 2 and exon 3
ENST00000650301.1	non canonical conserved
ENST00000350303.9	NP_001029031.1
ENST00000577857.5	NMD likely if extended
ENST00000356839.10	MANE_select
ENST00000356839.10	upstream ATG
ENST00000579546.1	NAGNAG splice site
ENST00000583850.5	NAGNAG splice site
ENST00000579391.1	NAGNAG splice site
ENST00000005340.10	MANE_select
ENST00000574642.5	NMD likely if extended
ENST00000320316.8	MANE_select
ENST00000302386.10	MANE_select
ENST00000574322.6	MANE_select
ENST00000573600.5	alternative 5' UTR
ENST00000574205.5	alternative 3' UTR
ENST00000318988.10	alternative 5' UTR
ENST00000575783.5	alternative 5' UTR
ENST00000571409.1	alternative 5' UTR
ENST00000573699.5	alternative 5' UTR
ENST00000573513.5	alternative 5' UTR
ENST00000570500.5	alternative 5' UTR
ENST00000396628.6	alternative 5' UTR
ENST00000573657.5	alternative 5' UTR
ENST00000360325.11	MANE_select
ENST00000317370.13	MANE_select
ENST00000007699.10	MANE_select
ENST00000571464.1	alternative 3' UTR
ENST00000576930.5	alternative 5' UTR
ENST00000573542.5	alternative 5' UTR
ENST00000336458.13	MANE_select
ENST00000419711.6	alternative 5' UTR
ENST00000571955.5	alternative 5' UTR
ENST00000573714.5	alternative 5' UTR
ENST00000416016.2	alternative 5' UTR
ENST00000389167.9	alternative 5' UTR
ENST00000380728.7	MANE_select
ENST00000577040.2	alternative 5' UTR
ENST00000399464.7	MANE_select
ENST00000570460.5	QC splicing correct
ENST00000571887.5	QC splicing correct
ENST00000158762.8	MANE_select
ENST00000333751.8	MANE_select
ENST00000576060.6	MANE_select
ENST00000576812.5	alternative 5' UTR
ENST00000619711.5	MANE_select
ENST00000619711.5	genebuild_only_MANE
ENST00000576201.5	alternative 5' UTR
ENST00000574401.5	alternative 5' UTR
ENST00000573213.1	alternative 5' UTR
ENST00000302422.4	MANE_select
ENST00000575301.5	alternative 5' UTR
ENST00000302926.7	MANE_select
ENST00000323675.4	MANE_select
ENST00000333870.8	MANE_select
ENST00000636696.4	CAGE supported TSS
ENST00000636696.4	LR annotation
ENST00000636696.4	MANE_select
ENST00000323206.2	MANE_select
ENST00000396568.1	alternative 5' UTR
ENST00000293829.9	MANE_select
ENST00000306071.7	MANE_select
ENST00000380599.9	MANE_select
ENST00000380599.9	alternative 5' UTR
ENST00000412468.3	No transcriptional, CAGE, polyAseq or RNAseq evidence to support this locus
ENST00000412468.3	not best-in-genome evidence
ENST00000617998.6	sequence error
ENST00000293825.11	CAGE supported TSS
ENST00000293825.11	LR annotation
ENST00000293825.11	MANE_select
ENST00000321337.12	MANE_select
ENST00000293831.13	MANE_select
ENST00000579139.1	NAGNAG splice site
ENST00000380498.10	NP_001035148.1
ENST00000250092.11	MANE_select
ENST00000655859.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000250124.11	MANE_select
ENST00000538513.6	alternative 5' UTR
ENST00000250055.3	MANE_select
ENST00000250113.12	MANE_select
ENST00000624152.1	confirm experimentally
ENST00000380450.9	MANE_select
ENST00000576846.1	confirm experimentally
ENST00000269298.10	MANE_select
ENST00000380466.6	upstream uORF
ENST00000576686.1	upstream uORF
ENST00000250111.9	MANE_select
ENST00000504290.5	NMD exception
ENST00000510385.5	NMD exception
ENST00000610623.4	NMD exception
ENST00000618944.4	NMD exception
ENST00000610292.4	NMD exception
ENST00000610292.4	alternative 5' UTR
ENST00000620739.4	NP_001263689
ENST00000420246.6	NMD exception
ENST00000455263.6	NMD exception
ENST00000610538.4	NMD exception
ENST00000622645.4	NMD exception
ENST00000445888.6	NAGNAG splice site
ENST00000445888.6	alternative 5' UTR
ENST00000619485.4	NAGNAG splice site
ENST00000269305.9	CAGE supported TSS
ENST00000269305.9	MANE_select
ENST00000269305.9	NP_000537
ENST00000574684.1	NMD likely if extended
ENST00000508793.5	alternative 5' UTR
ENST00000503591.1	alternative 5' UTR
ENST00000431639.6	alternative 5' UTR
ENST00000316024.9	FLJ32107
ENST00000457584.6	alternative 5' UTR
ENST00000396463.7	MANE_select
ENST00000396463.7	alternative 5' UTR
ENST00000226091.3	MANE_select
ENST00000448097.7	MANE_select
ENST00000575521.1	QC splicing correct
ENST00000570632.1	QC splicing correct
ENST00000301599.7	MANE_select
ENST00000575208.2	upstream uORF
ENST00000576384.1	CAGE supported TSS
ENST00000332439.5	MANE_select
ENST00000380358.9	CAGE supported TSS
ENST00000380358.9	LR annotation
ENST00000672274.1	CAGE supported TSS
ENST00000330494.12	CAGE supported TSS
ENST00000330494.12	LR annotation
ENST00000330494.12	MANE_select
ENST00000570758.1	NMD likely if extended
ENST00000470531.5	FLJ43940
ENST00000481999.1	FLJ39236
ENST00000324348.9	CAGE supported TSS
ENST00000324348.9	MANE_select
ENST00000324348.9	upstream ATG
ENST00000640240.1	CAGE supported TSS
ENST00000303731.9	MANE_select
ENST00000571947.5	alternative 5' UTR
ENST00000572656.2	alternative 5' UTR
ENST00000576538.5	alternative 5' UTR
ENST00000563694.6	MANE_select
ENST00000570782.1	alternative 5' UTR
ENST00000570784.1	alternative 5' UTR
ENST00000565740.5	NAGNAG splice site
ENST00000571540.5	NMD likely if extended
ENST00000254854.5	MANE_select
ENST00000380183.9	MANE_select
ENST00000647874.1	CAGE supported TSS
ENST00000647874.1	LR annotation
ENST00000647874.1	MANE_select
ENST00000577351.5	NMD likely if extended
ENST00000399413.3	Note strong kozak
ENST00000380149.6	upstream ATG
ENST00000448843.7	CAGE supported TSS
ENST00000448843.7	MANE_select
ENST00000318227.4	upstream ATG
ENST00000541682.7	MANE_select
ENST00000317276.9	MANE_select
ENST00000578089.1	NMD likely if extended
ENST00000581395.5	overlapping uORF
ENST00000584202.1	alternative 5' UTR
ENST00000316509.11	MANE_select
ENST00000437139.7	MANE_select
ENST00000389017.6	MANE_select
ENST00000316199.10	NAGNAG splice site
ENST00000585124.6	MANE_select
ENST00000577833.5	NAGNAG splice site
ENST00000581511.5	alternative 5' UTR
ENST00000651323.1	CAGE supported TSS
ENST00000651323.1	LR annotation
ENST00000651323.1	MANE_select
ENST00000585183.5	alternative 5' UTR
ENST00000584044.5	alternative 5' UTR
ENST00000314666.11	MANE_select
ENST00000581242.3	alternative 5' UTR
ENST00000380067.6	alternative 3' UTR
ENST00000580340.5	alternative 3' UTR
ENST00000577745.2	MANE_select
ENST00000226105.11	MANE_select
ENST00000583529.1	alternative 5' UTR
ENST00000361926.8	MANE_select
ENST00000579439.5	alternative 5' UTR
ENST00000647883.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000328248.7	MANE_select
ENST00000649935.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000396267.3	CAGE supported TSS
ENST00000396267.3	MANE_select
ENST00000396267.3	NP_001291876.1
ENST00000643221.1	NP_998762.1
ENST00000647210.1	alternative 5' UTR
ENST00000666354.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000582471.1	not organism-supported
ENST00000648839.1	CAGE supported TSS
ENST00000648839.1	LR annotation
ENST00000648839.1	MANE_select
ENST00000584164.6	alternative 5' UTR
ENST00000583011.6	alternative 5' UTR
ENST00000582556.5	alternative 5' UTR
ENST00000584343.6	alternative 5' UTR
ENST00000583515.1	alternative 5' UTR
ENST00000399398.2	not organism-supported
ENST00000582812.5	alternative 5' UTR
ENST00000582665.5	alternative 5' UTR
ENST00000334527.12	MANE_select
ENST00000584866.1	alternative 5' UTR
ENST00000582490.5	alternative 5' UTR
ENST00000580012.1	alternative 5' UTR
ENST00000360416.8	MANE_select
ENST00000411957.1	alternative 5' UTR
ENST00000293845.8	MANE_select
ENST00000581598.1	alternative 5' UTR
ENST00000329805.6	MANE_select
ENST00000619866.5	MANE_select
ENST00000611951.4	alternative 3' UTR
ENST00000584803.1	NAGNAG splice site
ENST00000578515.5	NAGNAG splice site
ENST00000578457.5	NMD likely if extended
ENST00000580959.5	NMD likely if extended
ENST00000581895.1	alternative 5' UTR
ENST00000173229.7	MANE_select
ENST00000306357.9	MANE_select
ENST00000573016.2	alternative 5' UTR
ENST00000573373.1	NMD likely if extended
ENST00000574460.1	QC splicing correct
ENST00000352665.10	MANE_select
ENST00000285199.12	MANE_select
ENST00000573955.1	confirm experimentally
ENST00000634974.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000330255.9	NAGNAG splice site
ENST00000571134.2	MANE_select
ENST00000571134.2	NAGNAG splice site
ENST00000609065.1	NMD likely if extended
ENST00000399363.4	confirm experimentally
ENST00000262441.10	MANE_select
ENST00000304773.5	CAGE supported TSS
ENST00000226193.6	MANE_select
ENST00000432992.7	MANE_select
ENST00000437099.6	CAGE supported TSS
ENST00000323816.8	CAGE supported TSS
ENST00000585266.5	CAGE supported TSS
ENST00000585266.5	alternative 5' UTR
ENST00000580865.5	CAGE supported TSS
ENST00000583882.5	CAGE supported TSS
ENST00000542249.5	CAGE supported TSS
ENST00000542249.5	alternative 5' UTR
ENST00000542249.5	upstream ATG
ENST00000579158.5	CAGE supported TSS
ENST00000579158.5	alternative 5' UTR
ENST00000579158.5	upstream ATG
ENST00000580811.5	CAGE supported TSS
ENST00000584146.6	alternative 5' UTR
ENST00000578655.1	NMD likely if extended
ENST00000578599.5	alternative 5' UTR
ENST00000584389.5	alternative 5' UTR
ENST00000584389.5	upstream ATG
ENST00000580043.1	alternative 5' UTR
ENST00000252172.9	MANE_select
ENST00000252172.9	alternative 5' UTR
ENST00000418404.8	alternative 5' UTR
ENST00000403437.2	MANE_select
ENST00000255381.2	MANE_select
ENST00000255381.2	NAGNAG splice site
ENST00000226207.6	MANE_select
ENST00000245503.10	MANE_select
ENST00000420805.1	alternative 5' UTR
ENST00000583535.6	MANE_select
ENST00000582580.1	NMD likely if extended
ENST00000255390.10	MANE_select
ENST00000577335.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000577335.2	NAGNAG splice site
ENST00000379774.5	MANE_select
ENST00000609540.1	alternative 5' UTR
ENST00000341871.8	MANE_select
ENST00000664973.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662130.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000581851.1	NMD exception
ENST00000581851.1	overlapping uORF
ENST00000580256.3	MANE_select
ENST00000645807.1	CAGE supported TSS
ENST00000648331.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000441885.8	MANE_select
ENST00000262442.9	MANE_select
ENST00000454412.6	confirm experimentally
ENST00000581682.1	upstream ATG
ENST00000579621.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000580306.7	MANE_select
ENST00000580306.7	NAGNAG splice site
ENST00000322748.7	alternative 5' UTR
ENST00000580903.1	alternative 5' UTR
ENST00000353533.10	MANE_select
ENST00000654149.1	Assembled from SLRseq reads (SRP049776)
ENST00000660226.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000577863.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671006.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669748.1	Assembled from SLRseq reads (SRP049776)
ENST00000425538.6	MANE_select
ENST00000379672.10	MANE_select
ENST00000338034.9	MANE_select
ENST00000395962.6	FLJ37368
ENST00000465825.5	FLJ36693
ENST00000446899.5	non canonical TEC
ENST00000609101.5	alternative 5' UTR
ENST00000580504.5	alternative 5' UTR
ENST00000581499.6	alternative 5' UTR
ENST00000583371.5	alternative 5' UTR
ENST00000578071.1	NMD likely if extended
ENST00000668709.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649257.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000649037.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000284110.2	MANE_select
ENST00000582752.7	Assembled from SLRseq reads (SRP049776)
ENST00000662986.1	Assembled from SLRseq reads (SRP049776)
ENST00000656960.1	Assembled from SLRseq reads (SRP049776)
ENST00000602539.2	Assembled from SLRseq reads (SRP049776)
ENST00000655970.1	Assembled from RACEseq reads
ENST00000661551.1	Assembled from SLRseq reads (SRP049776)
ENST00000653162.1	Assembled from SLRseq reads (SRP049776)
ENST00000623598.1	confirm experimentally
ENST00000664612.1	Assembled from SLRseq reads (SRP049776)
ENST00000664394.1	Assembled from SLRseq reads (SRP049776)
ENST00000652924.1	Assembled from SLRseq reads (SRP049776)
ENST00000656685.1	Assembled from SLRseq reads (SRP049776)
ENST00000660804.1	Assembled from SLRseq reads (SRP049776)
ENST00000449363.2	Assembled from SLRseq reads (SRP049776)
ENST00000449363.2	FLJ41105
ENST00000656963.1	Assembled from SLRseq reads (SRP049776)
ENST00000659114.1	Assembled from SLRseq reads (SRP049776)
ENST00000261643.8	MANE_select
ENST00000420162.7	MANE_select
ENST00000360954.3	MANE_select
ENST00000466596.5	FLJ13661
ENST00000655690.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671827.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000656370.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664242.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666952.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660746.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661145.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445035.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665893.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660966.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652815.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662040.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665225.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664152.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666016.1	Assembled from SLRseq reads (SRP049776)
ENST00000675819.1	alternative 5' UTR
ENST00000675854.1	alternative 5' UTR
ENST00000612492.5	alternative 5' UTR
ENST00000312280.9	MANE_select
ENST00000312280.9	alternative 5' UTR
ENST00000580584.3	alternative 5' UTR
ENST00000676221.1	alternative 5' UTR
ENST00000675950.1	alternative 5' UTR
ENST00000675808.1	alternative 5' UTR
ENST00000644020.1	NP_001317072.1
ENST00000644020.1	alternative 5' UTR
ENST00000674651.1	alternative 5' UTR
ENST00000674707.1	alternative 5' UTR
ENST00000395936.7	NP_001317072.1
ENST00000646419.2	NP_001317072.1
ENST00000646419.2	alternative 5' UTR
ENST00000674947.1	alternative 5' UTR
ENST00000675350.1	alternative 5' UTR
ENST00000674868.1	alternative 5' UTR
ENST00000431343.1	FLJ25830
ENST00000654786.1	Assembled from SLRseq reads (SRP049776)
ENST00000453339.2	QC splicing correct
ENST00000395930.6	MANE_select
ENST00000536146.1	alternative 5' UTR
ENST00000539316.1	alternative 5' UTR
ENST00000543896.1	alternative 5' UTR
ENST00000619038.5	FLJ36674
ENST00000619038.5	MANE_select
ENST00000524205.3	alternative 5' UTR
ENST00000584811.5	non canonical TEC
ENST00000518321.6	MANE_select
ENST00000438826.7	QC splicing correct
ENST00000438826.7	non canonical TEC
ENST00000428082.6	QC splicing correct
ENST00000428082.6	non canonical TEC
ENST00000523573.5	non canonical TEC
ENST00000523573.5	non-canonical acceptor splice site betwween exons 6 and 7
ENST00000521179.5	non canonical TEC
ENST00000416464.6	FLJ31464
ENST00000649191.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000649191.2	MANE_select
ENST00000649191.2	alternative 5' UTR
ENST00000649191.2	upstream uORF
ENST00000577372.5	alternative 5' UTR
ENST00000579535.5	NMD likely if extended
ENST00000582182.6	NMD likely if extended
ENST00000580259.5	alternative 5' UTR
ENST00000395894.6	alternative 5' UTR
ENST00000583566.6	MANE_select
ENST00000583566.6	alternative 5' UTR
ENST00000583347.1	NMD likely if extended
ENST00000585171.5	NMD likely if extended
ENST00000585171.5	alternative 5' UTR
ENST00000413242.6	KIAA1874
ENST00000584301.5	alternative 5' UTR
ENST00000580596.5	alternative 5' UTR
ENST00000464963.5	alternative 5' UTR
ENST00000464963.5	novel transcript
ENST00000578506.1	alternative 5' UTR
ENST00000418821.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656490.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000653263.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000399277.6	FLJ36065
ENST00000399277.6	MANE_select
ENST00000497719.5	alternative 3' UTR
ENST00000472495.5	alternative 3' UTR
ENST00000475723.5	FLJ31218
ENST00000261647.10	MANE_select
ENST00000261647.10	upstream ATG
ENST00000481107.1	FLJ37500
ENST00000465567.1	DKFZp667J2313
ENST00000268712.8	MANE_select
ENST00000395851.5	KIAA1047
ENST00000579573.2	NAGNAG splice site
ENST00000436828.5	alternative 5' UTR
ENST00000430577.2	alternative 5' UTR
ENST00000225609.10	MANE_select
ENST00000613719.1	non canonical other
ENST00000488375.2	nested 454 RNA-Seq supported
ENST00000299736.5	MANE_select
ENST00000577958.1	alternative 5' UTR
ENST00000577640.1	alternative 5' UTR
ENST00000302182.8	MANE_select
ENST00000395839.5	alternative 5' UTR
ENST00000395837.1	alternative 5' UTR
ENST00000578706.5	alternative 5' UTR
ENST00000338560.12	MANE_select
ENST00000583241.1	NMD likely if extended
ENST00000475947.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000487066.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000580180.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660020.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665646.1	Assembled from SLRseq reads (SRP049776)
ENST00000668333.1	Assembled from SLRseq reads (SRP049776)
ENST00000660419.1	Assembled from SLRseq reads (SRP049776)
ENST00000667979.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663781.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664939.1	Assembled from SLRseq reads (SRP049776)
ENST00000491009.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000583400.7	Assembled from SLRseq reads (SRP049776)
ENST00000654778.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000497774.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669136.1	Assembled from SLRseq reads (SRP049776)
ENST00000659884.1	Assembled from SLRseq reads (SRP049776)
ENST00000654561.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653954.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000480811.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662869.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671170.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666215.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000483140.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000477249.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000484836.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655540.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000579473.6	Assembled from SLRseq reads (SRP049776)
ENST00000581718.6	Assembled from SLRseq reads (SRP049776)
ENST00000654356.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658116.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000475953.5	MGC40157
ENST00000660462.1	Assembled from SLRseq reads (SRP049776)
ENST00000658943.1	Assembled from SLRseq reads (SRP049776)
ENST00000585048.1	CAGE supported TSS
ENST00000470794.2	MANE_select
ENST00000409083.7	FLJ35696
ENST00000655442.1	Assembled from SLRseq reads (SRP049776)
ENST00000395825.4	MANE_select
ENST00000395824.5	alternative 5' UTR
ENST00000448349.2	alternative 5' UTR
ENST00000311331.12	MANE_select
ENST00000583766.5	alternative 5' UTR
ENST00000423860.2	alternative 5' UTR
ENST00000340621.9	FLJ36492
ENST00000340621.9	QC splicing correct
ENST00000399273.5	FLJ36492
ENST00000399273.5	MANE_select
ENST00000428950.2	QC splicing correct
ENST00000417524.5	QC splicing correct
ENST00000393005.6	TL132-like (LOC162632)
ENST00000399211.8	QC splicing correct
ENST00000429445.1	not best-in-genome evidence
ENST00000261651.6	LOC906597
ENST00000261652.7	MANE_select
ENST00000581616.2	NMD likely if extended
ENST00000659709.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671173.1	Assembled from SLRseq reads (SRP049776)
ENST00000651222.2	MANE_select
ENST00000584936.2	NMD likely if extended
ENST00000321560.4	LOC201164
ENST00000321560.4	MANE_select
ENST00000285071.9	MANE_select
ENST00000389171.4	alternative 5' UTR
ENST00000461699.1	alternative 5' UTR
ENST00000268717.10	MANE_select
ENST00000389022.9	MANE_select
ENST00000580462.1	NMD likely if extended
ENST00000268711.4	MANE_select
ENST00000225688.4	MANE_select
ENST00000579152.1	NMD likely if extended
ENST00000671231.1	Assembled from SLRseq reads (SRP049776)
ENST00000395782.5	alternative 5' UTR
ENST00000255389.10	MANE_select
ENST00000472446.1	NMD likely if extended
ENST00000353383.6	MANE_select
ENST00000471135.2	alternative 5' UTR
ENST00000395774.1	alternative 5' UTR
ENST00000583732.1	NMD likely if extended
ENST00000577897.2	alternative 5' UTR
ENST00000379504.8	MANE_select
ENST00000582416.5	alternative 5' UTR
ENST00000399187.6	DKFZP586M1120
ENST00000399187.6	MANE_select
ENST00000399187.6	non canonical U12
ENST00000399187.6	non canonical conserved
ENST00000581264.5	alternative 5' UTR
ENST00000479684.2	alternative 5' UTR
ENST00000584166.5	alternative 5' UTR
ENST00000584166.5	non canonical conserved
ENST00000490517.5	non canonical U12
ENST00000490517.5	non canonical conserved
ENST00000585108.5	alternative 5' UTR
ENST00000399182.5	non canonical U12
ENST00000399182.5	non canonical conserved
ENST00000579977.1	alternative 5' UTR
ENST00000583171.5	non canonical conserved
ENST00000577202.1	NMD likely if extended
ENST00000474627.8	MANE_select
ENST00000444058.1	alternative 5' UTR
ENST00000268719.9	MANE_select
ENST00000481836.2	QC splicing correct
ENST00000225729.8	MANE_select
ENST00000579224.5	NMD exception
ENST00000647165.2	CAGE supported TSS
ENST00000647165.2	LR annotation
ENST00000647165.2	MANE_select
ENST00000412324.1	non canonical TEC
ENST00000585180.1	NMD likely if extended
ENST00000585180.1	alternative 5' UTR
ENST00000399138.5	MANE_select
ENST00000316843.9	MANE_select
ENST00000327031.9	MANE_select
ENST00000584444.5	NMD likely if extended
ENST00000579341.5	NAGNAG splice site
ENST00000323019.9	MANE_select
ENST00000321105.10	MANE_select
ENST00000580095.5	confirm experimentally
ENST00000582230.5	NMD likely if extended
ENST00000584887.1	NMD likely if extended
ENST00000406438.5	MANE_select
ENST00000316694.8	MANE_select
ENST00000582653.1	alternative 5' UTR
ENST00000583780.1	alternative 5' UTR
ENST00000399134.5	MANE_select
ENST00000300992.12	QC splicing correct
ENST00000328114.11	MANE_select
ENST00000610104.1	nested 454 RNA-Seq supported
ENST00000608376.1	nested 454 RNA-Seq supported
ENST00000609578.1	nested 454 RNA-Seq supported
ENST00000609959.1	nested 454 RNA-Seq supported
ENST00000621104.4	novel transcript
ENST00000613211.1	novel transcript
ENST00000445752.5	novel transcript FLJ36492
ENST00000455629.5	novel transcript
ENST00000450277.2	novel transcript
ENST00000405044.6	alternative 5' UTR
ENST00000575220.5	alternative 5' UTR
ENST00000573652.1	alternative 5' UTR
ENST00000575211.1	alternative 5' UTR
ENST00000395675.7	MANE_select
ENST00000454745.2	alternative 5' UTR
ENST00000572555.5	alternative 5' UTR
ENST00000449552.6	alternative 5' UTR
ENST00000571708.5	alternative 5' UTR
ENST00000573443.5	alternative 5' UTR
ENST00000571542.5	alternative 5' UTR
ENST00000395665.9	MANE_select
ENST00000395665.9	NAGNAG splice site
ENST00000301938.4	DKFZp434O1826
ENST00000307767.13	DKFZp686F19101
ENST00000307767.13	MANE_select
ENST00000482741.1	FLJ46240
ENST00000441887.5	alternative 5' UTR
ENST00000573432.5	NMD likely if extended
ENST00000432893.6	alternative 5' UTR
ENST00000414602.5	alternative 5' UTR
ENST00000574522.5	alternative 5' UTR
ENST00000570450.5	alternative 5' UTR
ENST00000492129.5	DKFZp686D15157
ENST00000419284.6	alternative 5' UTR
ENST00000412418.5	alternative 5' UTR
ENST00000268835.7	MANE_select
ENST00000478622.6	NMD likely if extended
ENST00000575102.5	alternative 5' UTR
ENST00000576355.5	alternative 5' UTR
ENST00000422237.5	alternative 5' UTR
ENST00000395645.4	MANE_select
ENST00000388995.11	MANE_select
ENST00000284154.10	MANE_select
ENST00000399091.1	QC splicing correct
ENST00000399091.1	not best-in-genome evidence
ENST00000399093.2	LOC388436
ENST00000399093.2	QC splicing correct
ENST00000399093.2	not best-in-genome evidence
ENST00000344415.9	MANE_select
ENST00000495691.2	QC splicing correct
ENST00000582015.5	alternative 5' UTR
ENST00000584633.1	alternative 5' UTR
ENST00000583197.5	alternative 5' UTR
ENST00000577692.5	alternative 5' UTR
ENST00000494192.6	NAGNAG splice site
ENST00000575595.5	NAGNAG splice site
ENST00000581024.5	alternative 5' UTR
ENST00000584150.5	alternative 5' UTR
ENST00000577195.5	alternative 5' UTR
ENST00000395620.6	FLJ11134
ENST00000571254.1	NAGNAG splice site
ENST00000261499.10	LR annotation
ENST00000261499.10	MANE_select
ENST00000655381.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000395602.8	alternative 5' UTR
ENST00000579284.5	alternative 5' UTR
ENST00000443215.5	alternative 5' UTR
ENST00000395604.8	MANE_select
ENST00000482850.1	QC splicing correct
ENST00000482850.1	alternative 5' UTR
ENST00000299610.5	MANE_select
ENST00000660817.1	Assembled from SLRseq reads (SRP049776)
ENST00000575165.6	QC splicing correct
ENST00000575165.6	alternative 5' UTR
ENST00000574149.6	QC splicing correct
ENST00000461366.2	MANE_select
ENST00000658570.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668984.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655270.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456537.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664238.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000610229.1	nested 454 RNA-Seq supported
ENST00000270570.8	FLJ10847
ENST00000270570.8	MANE_select
ENST00000576095.5	NMD likely if extended
ENST00000495425.6	novel transcript
ENST00000573009.1	NMD likely if extended
ENST00000581518.6	alternative 5' UTR
ENST00000673136.1	alternative 5' UTR
ENST00000580550.5	alternative 5' UTR
ENST00000672465.1	alternative 5' UTR
ENST00000672357.1	alternative 5' UTR
ENST00000176643.11	LR annotation
ENST00000176643.11	MANE_select
ENST00000579855.5	alternative 5' UTR
ENST00000672709.1	alternative 3' UTR
ENST00000476965.5	DKFZp686E23276
ENST00000672591.1	alternative 3' UTR
ENST00000571163.2	QC splicing correct
ENST00000575384.2	alternative 3' UTR
ENST00000433844.4	MANE_select
ENST00000433844.4	supported by PacBio data
ENST00000479677.6	FLJ36558
ENST00000457500.6	alternative 5' UTR
ENST00000225740.11	MANE_select
ENST00000439102.6	alternative 5' UTR
ENST00000574162.5	alternative 5' UTR
ENST00000573368.5	alternative 5' UTR
ENST00000570414.1	alternative 5' UTR
ENST00000361658.6	alternative 3' UTR
ENST00000395544.9	MANE_select
ENST00000395544.9	alternative 3' UTR
ENST00000602532.1	not organism-supported
ENST00000225737.11	MANE_select
ENST00000395536.7	non canonical TEC
ENST00000676570.1	align_id:3616034|asmbl_106199
ENST00000678321.1	align_id:3616028|asmbl_106193
ENST00000678315.1	align_id:3616044|asmbl_106209
ENST00000678019.1	align_id:3616032|asmbl_106197
ENST00000679048.1	align_id:3616025|asmbl_106190
ENST00000677148.1	align_id:3616035|asmbl_106200
ENST00000678651.1	align_id:3616014|asmbl_106179
ENST00000679049.1	align_id:3616039|asmbl_106204
ENST00000467722.3	align_id:3616061|asmbl_106226
ENST00000583528.6	align_id:3616016|asmbl_106181
ENST00000680019.1	align_id:3616036|asmbl_106201
ENST00000681593.1	align_id:3616042|asmbl_106207
ENST00000680830.1	align_id:3616013|asmbl_106178
ENST00000680124.1	align_id:3616012|asmbl_106177
ENST00000395527.8	alternative 5' UTR
ENST00000583482.7	alternative 5' UTR
ENST00000679255.1	align_id:3616010|asmbl_106175
ENST00000679255.1	alternative 5' UTR
ENST00000681202.1	align_id:3616047|asmbl_106212
ENST00000677914.1	align_id:3616009|asmbl_106174
ENST00000677914.1	alternative 5' UTR
ENST00000578321.2	alternative 5' UTR
ENST00000680374.1	align_id:3616041|asmbl_106206
ENST00000583463.6	alternative 5' UTR
ENST00000681564.1	align_id:3616031|asmbl_106196
ENST00000681116.1	align_id:3616046|asmbl_106211
ENST00000680572.1	align_id:3616037|asmbl_106202
ENST00000680604.1	align_id:3616043|asmbl_106208
ENST00000681875.1	align_id:3616026|asmbl_106191
ENST00000679058.1	CAGE supported TSS
ENST00000679058.1	align_id:3616008|asmbl_106173
ENST00000581973.7	alternative 5' UTR
ENST00000580934.2	No clear CAGE, ESTs  are from testis, so maybe tissue specific
ENST00000580934.2	Snaptron intron support for first intron
ENST00000580934.2	alternative 5' UTR
ENST00000680740.1	align_id:3616017|asmbl_106182
ENST00000579688.2	align_id:3616015|asmbl_106180
ENST00000581399.6	align_id:3616011|asmbl_106176
ENST00000679819.1	align_id:3616057|asmbl_106222
ENST00000679801.1	align_id:3616030|asmbl_106195
ENST00000681545.1	align_id:3616021|asmbl_106186
ENST00000680373.1	align_id:3616018|asmbl_106183
ENST00000679740.1	align_id:3616055|asmbl_106220
ENST00000681731.1	align_id:3616022|asmbl_106187
ENST00000677784.1	align_id:3616024|asmbl_106189
ENST00000676737.1	align_id:3616029|asmbl_106194
ENST00000661883.1	not best-in-genome evidence
ENST00000399044.1	MANE_select
ENST00000648089.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000583962.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000443508.7	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000662319.1	Assembled from SLRseq reads (SRP049776)
ENST00000261497.9	MANE_select
ENST00000664838.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666441.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668335.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659567.1	Assembled from SLRseq reads (SRP049776)
ENST00000671326.1	Assembled from SLRseq reads (SRP049776)
ENST00000656070.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664827.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664341.1	Assembled from SLRseq reads (SRP049776)
ENST00000582161.5	alternative 5' UTR
ENST00000317635.6	MANE_select
ENST00000661579.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000611551.1	MANE_select
ENST00000342679.9	MANE_select
ENST00000496046.5	QC splicing correct
ENST00000526076.6	alternative 5' UTR
ENST00000583088.6	MANE_select
ENST00000331718.5	alternative 5' UTR
ENST00000667136.1	Assembled from SLRseq reads (SRP049776)
ENST00000654263.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661785.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657015.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657905.1	Assembled from SLRseq reads (SRP049776)
ENST00000671646.1	Assembled from SLRseq reads (SRP049776)
ENST00000663530.1	Assembled from SLRseq reads (SRP049776)
ENST00000659175.1	Assembled from SLRseq reads (SRP049776)
ENST00000663437.1	Assembled from SLRseq reads (SRP049776)
ENST00000656879.1	Assembled from SLRseq reads (SRP049776)
ENST00000412778.4	Assembled from SLRseq reads (SRP049776)
ENST00000659749.1	Assembled from SLRseq reads (SRP049776)
ENST00000666869.1	Assembled from SLRseq reads (SRP049776)
ENST00000652925.1	Assembled from SLRseq reads (SRP049776)
ENST00000669595.1	Assembled from SLRseq reads (SRP049776)
ENST00000655246.1	Assembled from SLRseq reads (SRP049776)
ENST00000653508.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653508.1	Assembled from SLRseq reads (SRP049776)
ENST00000658783.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668194.1	Assembled from SLRseq reads (SRP049776)
ENST00000655529.1	Assembled from SLRseq reads (SRP049776)
ENST00000659967.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660505.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656149.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653536.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656051.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659671.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660551.1	Assembled from SLRseq reads (SRP049776)
ENST00000657168.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663304.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000540040.3	MANE_select
ENST00000540040.3	not best-in-genome evidence
ENST00000650069.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000649401.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000262394.7	MANE_select
ENST00000666005.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656365.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000586223.5	non canonical TEC
ENST00000583370.5	alternative 5' UTR
ENST00000395473.7	MANE_select
ENST00000313735.11	MANE_select
ENST00000379103.7	alternative 5' UTR
ENST00000460380.6	alternative 5' UTR
ENST00000379102.8	MANE_select
ENST00000503642.1	alternative 5' UTR
ENST00000508816.1	alternative 5' UTR
ENST00000661257.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661257.1	Assembled from SLRseq reads (SRP049776)
ENST00000668365.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668365.1	Assembled from SLRseq reads (SRP049776)
ENST00000666961.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654644.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660253.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670416.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000407008.8	MANE_select
ENST00000658960.1	Assembled from SLRseq reads (SRP049776)
ENST00000226230.8	MANE_select
ENST00000579419.5	alternative 5' UTR
ENST00000395418.8	MANE_select
ENST00000395418.8	alternative 5' UTR
ENST00000585089.5	alternative 5' UTR
ENST00000585313.5	alternative 5' UTR
ENST00000577498.1	alternative 5' UTR
ENST00000578158.5	alternative 5' UTR
ENST00000226225.7	MANE_select
ENST00000582302.2	alternative 5' UTR
ENST00000540200.6	MANE_select
ENST00000618887.2	NP_001277074.1
ENST00000292114.8	MANE_select
ENST00000483505.6	QC splicing correct
ENST00000591482.1	NMD likely if extended
ENST00000536498.5	confirm experimentally
ENST00000536498.5	upstream ATG
ENST00000585482.6	MANE_select
ENST00000226218.9	MANE_select
ENST00000542029.1	alternative 5' UTR
ENST00000612814.5	MANE_select
ENST00000314669.10	MANE_select
ENST00000577936.1	alternative 5' UTR
ENST00000579795.6	MANE_select
ENST00000579795.6	alternative 5' UTR
ENST00000335765.9	MANE_select
ENST00000308360.8	MANE_select
ENST00000395321.6	alternative 5' UTR
ENST00000226253.9	MANE_select
ENST00000460201.6	alternative 5' UTR
ENST00000584086.5	alternative 5' UTR
ENST00000435638.5	alternative 5' UTR
ENST00000578590.1	alternative 5' UTR
ENST00000321765.10	MANE_select
ENST00000580567.6	NAGNAG splice site
ENST00000578479.1	NAGNAG splice site
ENST00000670419.1	Assembled from SLRseq reads (SRP049776)
ENST00000301037.11	MANE_select
ENST00000527863.2	NAGNAG splice site
ENST00000528896.7	MANE_select
ENST00000247020.9	MANE_select
ENST00000347486.8	alternative 5' UTR
ENST00000314616.11	MANE_select
ENST00000314616.11	alternative 5' UTR
ENST00000577713.1	alternative 5' UTR
ENST00000395243.7	NMD exception
ENST00000395245.9	MANE_select
ENST00000395245.9	genebuild_only_MANE
ENST00000450529.5	CAGE supported TSS
ENST00000450529.5	alternative 5' UTR
ENST00000436730.7	CAGE supported TSS
ENST00000636772.1	NMD exception
ENST00000353676.9	alternative 5' UTR
ENST00000412625.5	alternative 5' UTR
ENST00000636513.1	NMD exception
ENST00000419712.7	CAGE supported TSS
ENST00000636154.2	NAGNAG splice site
ENST00000636154.2	NMD exception
ENST00000580843.6	CAGE supported TSS
ENST00000582934.1	CAGE supported TSS
ENST00000422514.7	MANE_select
ENST00000292090.8	MANE_select
ENST00000268766.11	MANE_select
ENST00000593261.1	NMD likely if extended
ENST00000262395.10	MANE_select
ENST00000452648.7	alternative 5' UTR
ENST00000577376.5	alternative 5' UTR
ENST00000581229.5	alternative 5' UTR
ENST00000577513.5	alternative 5' UTR
ENST00000254928.10	MANE_select
ENST00000394908.9	MANE_select
ENST00000378895.9	MANE_select
ENST00000332830.9	MANE_select
ENST00000579563.1	NMD likely if extended
ENST00000483934.5	NMD likely if extended
ENST00000323372.9	MANE_select
ENST00000317338.17	MANE_select
ENST00000527372.7	MANE_select
ENST00000533112.5	alternative 5' UTR
ENST00000225387.8	MANE_select
ENST00000225388.9	MANE_select
ENST00000261716.8	MANE_select
ENST00000583121.5	alternative 5' UTR
ENST00000307201.5	MANE_select
ENST00000301057.8	MANE_select
ENST00000225394.8	MANE_select
ENST00000394859.8	MANE_select
ENST00000492276.6	alternative 5' UTR
ENST00000540801.6	MANE_select
ENST00000448319.5	alternative 5' UTR
ENST00000582953.1	NMD likely if extended
ENST00000247026.10	MANE_select
ENST00000650711.1	MANE_select
ENST00000650711.1	genebuild_only_MANE
ENST00000394821.2	alternative 5' UTR
ENST00000261714.11	MANE_select
ENST00000328886.5	MANE_select
ENST00000225719.9	MANE_select
ENST00000588977.1	NMD likely if extended
ENST00000451249.7	MANE_select
ENST00000436477.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667731.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651170.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000652774.1	Assembled from SLRseq reads (SRP049776)
ENST00000661384.1	Assembled from SLRseq reads (SRP049776)
ENST00000625101.1	confirm experimentally
ENST00000623719.1	confirm experimentally
ENST00000324238.7	MANE_select
ENST00000321990.5	MANE_select
ENST00000581216.6	MANE_select
ENST00000330889.8	MANE_select
ENST00000328381.10	MANE_select
ENST00000535306.6	NP_001171921
ENST00000431387.8	NP_001121619
ENST00000358273.9	MANE_select
ENST00000479614.1	not organism-supported
ENST00000581113.6	CAGE supported TSS
ENST00000247271.5	MANE_select
ENST00000330927.5	MANE_select
ENST00000577894.1	alternative 5' UTR
ENST00000577894.1	upstream ATG
ENST00000578584.5	CAGE supported TSS
ENST00000462804.3	MANE_select
ENST00000462804.3	alternative 5' UTR
ENST00000461237.5	downstream ATG
ENST00000621161.5	MANE_select
ENST00000624452.1	confirm experimentally
ENST00000612557.1	CAGE supported TSS
ENST00000302362.11	MANE_select
ENST00000261708.9	MANE_select
ENST00000490218.6	QC splicing correct
ENST00000322652.10	MANE_select
ENST00000583342.1	downstream ATG
ENST00000579206.5	alternative 5' UTR
ENST00000579206.5	upstream uORF
ENST00000582640.1	confirm experimentally
ENST00000579186.1	confirm experimentally
ENST00000625123.1	confirm experimentally
ENST00000613639.1	CAGE supported TSS
ENST00000583994.5	alternative 3' UTR
ENST00000545287.7	MANE_select
ENST00000545287.7	NP_001028738
ENST00000354266.7	NAGNAG splice site
ENST00000623319.1	confirm experimentally
ENST00000623905.1	confirm experimentally
ENST00000653149.1	Assembled from SLRseq reads (SRP049776)
ENST00000269051.9	MANE_select
ENST00000577809.6	MANE_select
ENST00000577809.6	non canonical U12
ENST00000580558.5	non canonical U12
ENST00000583774.5	non canonical U12
ENST00000583221.5	NAGNAG splice site
ENST00000583221.5	non canonical U12
ENST00000583334.5	non canonical U12
ENST00000394670.9	CAGE supported TSS
ENST00000394670.9	MANE_select
ENST00000394670.9	NP_001091977
ENST00000580759.5	alternative 5' UTR
ENST00000394679.9	alternative 5' UTR
ENST00000582165.1	alternative 5' UTR
ENST00000578918.1	alternative 5' UTR
ENST00000649012.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000649012.1	alternative 3' UTR
ENST00000457654.6	alternative 3' UTR
ENST00000261712.8	MANE_select
ENST00000580904.1	alternative 5' UTR
ENST00000313401.4	MANE_select
ENST00000318217.10	MANE_select
ENST00000623444.1	confirm experimentally
ENST00000650181.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000650181.1	NAGNAG splice site
ENST00000623428.1	confirm experimentally
ENST00000624836.1	confirm experimentally
ENST00000435733.2	Assembled from SLRseq reads (SRP049776)
ENST00000394642.7	alternative 5' UTR
ENST00000395149.6	alternative 5' UTR
ENST00000579849.6	MANE_select
ENST00000439138.5	alternative 5' UTR
ENST00000583437.2	alternative 5' UTR
ENST00000269053.8	MANE_select
ENST00000225823.7	MANE_select
ENST00000624540.1	confirm experimentally
ENST00000659958.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000624332.1	confirm experimentally
ENST00000583224.3	Assembled from SLRseq reads (SRP049776)
ENST00000667899.1	Assembled from SLRseq reads (SRP049776)
ENST00000624362.1	confirm experimentally
ENST00000225831.4	MANE_select
ENST00000378569.2	MANE_select
ENST00000378569.2	upstream ATG
ENST00000394630.3	upstream ATG
ENST00000305869.4	MANE_select
ENST00000394620.2	MANE_select
ENST00000394620.2	upstream ATG
ENST00000225844.7	MANE_select
ENST00000225842.4	MANE_select
ENST00000665501.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670265.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657652.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653506.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000623254.1	FLJ44815
ENST00000661426.1	Assembled from SLRseq reads (SRP049776)
ENST00000321639.7	QC splicing correct
ENST00000631683.2	MANE_select
ENST00000624723.1	confirm experimentally
ENST00000421975.7	NP_001180458
ENST00000314144.10	MANE_select
ENST00000436961.7	NP_001180459
ENST00000649470.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000361952.5	MANE_select
ENST00000585941.5	downstream ATG
ENST00000378526.9	MANE_select
ENST00000394597.7	MANE_select
ENST00000394597.7	alternative 5' UTR
ENST00000447669.6	alternative 5' UTR
ENST00000447669.6	upstream ATG
ENST00000415395.6	alternative 5' UTR
ENST00000414419.6	alternative 5' UTR
ENST00000590309.1	confirm experimentally
ENST00000345365.11	MANE_select
ENST00000394589.8	alternative 5' UTR
ENST00000590016.5	NP_001136043
ENST00000592928.2	NMD likely if extended
ENST00000158009.6	MANE_select
ENST00000442241.9	MANE_select
ENST00000394570.7	MANE_select
ENST00000394570.7	NAGNAG splice site
ENST00000299977.9	MANE_select
ENST00000662865.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664469.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661410.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663051.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657419.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669048.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664542.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659130.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000585387.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000591886.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662029.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662029.1	NAGNAG splice site
ENST00000308377.8	alternative 5' UTR
ENST00000591682.5	alternative 5' UTR
ENST00000441608.6	alternative 5' UTR
ENST00000589811.5	alternative 5' UTR
ENST00000430814.5	alternative 5' UTR
ENST00000427966.5	alternative 5' UTR
ENST00000588579.1	alternative 5' UTR
ENST00000592122.1	alternative 5' UTR
ENST00000304905.10	MANE_select
ENST00000394562.5	alternative 5' UTR
ENST00000452764.3	alternative 5' UTR
ENST00000447040.6	alternative 5' UTR
ENST00000445092.5	alternative 5' UTR
ENST00000285013.11	MANE_select
ENST00000526861.5	alternative 5' UTR
ENST00000524511.5	alternative 5' UTR
ENST00000260908.12	QC splicing correct
ENST00000674182.1	CAGE supported TSS
ENST00000674182.1	MANE_select
ENST00000665667.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659685.1	Assembled from SLRseq reads (SRP049776)
ENST00000225873.9	MANE_select
ENST00000585380.1	alternative 5' UTR
ENST00000589774.5	alternative 5' UTR
ENST00000610402.5	MANE_select
ENST00000614600.4	alternative 5' UTR
ENST00000590432.5	alternative 5' UTR
ENST00000612116.5	alternative 5' UTR
ENST00000593014.3	alternative 5' UTR
ENST00000603427.5	alternative 5' UTR
ENST00000604360.5	NMD likely if extended
ENST00000605844.6	MANE_select
ENST00000603017.2	MANE_select
ENST00000604641.6	MANE_select
ENST00000605424.6	MANE_select
ENST00000605424.6	alternative 3' UTR
ENST00000615136.4	alternative 3' UTR
ENST00000605587.2	MANE_select
ENST00000604834.6	MANE_select
ENST00000605140.6	CAGE supported TSS
ENST00000605140.6	LR annotation
ENST00000651122.1	MANE_select
ENST00000603197.6	CAGE supported TSS
ENST00000603197.6	LR annotation
ENST00000605509.2	QC splicing correct
ENST00000620284.5	MANE_select
ENST00000613308.4	NP_001030008
ENST00000615905.5	MANE_select
ENST00000615905.5	alternative 5' UTR
ENST00000611905.2	MANE_select
ENST00000618404.5	MANE_select
ENST00000617897.2	MANE_select
ENST00000615050.2	MANE_select
ENST00000616054.2	MANE_select
ENST00000613922.2	MANE_select
ENST00000615863.2	MANE_select
ENST00000621587.1	not best-in-genome evidence
ENST00000619989.1	MANE_select
ENST00000621034.1	not best-in-genome evidence
ENST00000616101.4	not best-in-genome evidence
ENST00000482104.1	not best-in-genome evidence
ENST00000617429.5	MANE_select
ENST00000614623.5	MANE_select
ENST00000610930.4	non canonical TEC
ENST00000616159.4	alternative 5' UTR
ENST00000622055.4	alternative 5' UTR
ENST00000616207.4	alternative 5' UTR
ENST00000613551.4	alternative 5' UTR
ENST00000614443.2	MANE_select
ENST00000614443.2	alternative 5' UTR
ENST00000619326.1	alternative 5' UTR
ENST00000613102.5	MANE_select
ENST00000616019.1	alternative 5' UTR
ENST00000618403.5	MANE_select
ENST00000614766.5	MANE_select
ENST00000616810.1	confirm experimentally
ENST00000610398.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662436.1	Assembled from SLRseq reads (SRP049776)
ENST00000664845.1	Assembled from SLRseq reads (SRP049776)
ENST00000669023.1	Assembled from SLRseq reads (SRP049776)
ENST00000671186.1	Assembled from SLRseq reads (SRP049776)
ENST00000673652.1	NMD likely if extended
ENST00000614239.1	MANE_select
ENST00000679508.1	NMD likely if extended
ENST00000619387.5	MANE_select
ENST00000619606.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000616317.5	MANE_select
ENST00000621960.1	alternative 5' UTR
ENST00000614789.4	alternative 5' UTR
ENST00000617548.1	alternative 5' UTR
ENST00000616352.4	alternative 5' UTR
ENST00000615133.2	MANE_select
ENST00000615133.2	non canonical conserved
ENST00000611038.4	non canonical conserved
ENST00000615182.5	MANE_select
ENST00000612272.4	alternative 5' UTR
ENST00000617516.5	MANE_select
ENST00000613659.1	alternative 5' UTR
ENST00000612223.5	MANE_select
ENST00000614941.4	NP_001157019
ENST00000619976.1	NMD likely if extended
ENST00000617633.5	MANE_select
ENST00000617811.5	MANE_select
ENST00000617678.2	not best-in-genome evidence
ENST00000649858.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000613675.5	MANE_select
ENST00000613675.5	upstream ATG
ENST00000616987.5	MANE_select
ENST00000612932.6	MANE_select
ENST00000612932.6	NP_055413.2
ENST00000622683.5	MANE_select
ENST00000622683.5	NP_001186346.1
ENST00000620417.4	confirm experimentally
ENST00000617146.5	MANE_select
ENST00000617146.5	NP_079524.2
ENST00000621492.4	NAGNAG splice site
ENST00000621763.4	NAGNAG splice site
ENST00000621654.2	MANE_select
ENST00000621332.5	MANE_select
ENST00000613478.2	MANE_select
ENST00000620225.5	MANE_select
ENST00000620225.5	genebuild_only_MANE
ENST00000611883.4	alternative 5' UTR
ENST00000619426.5	MANE_select
ENST00000619039.5	MANE_select
ENST00000614790.5	MANE_select
ENST00000614158.2	MANE_select
ENST00000479035.7	MANE_select
ENST00000584583.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000318008.11	MANE_select
ENST00000583195.2	NMD exception
ENST00000378079.3	MANE_select
ENST00000647826.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000315392.9	MANE_select
ENST00000577941.5	NMD likely if extended
ENST00000667388.1	Assembled from SLRseq reads (SRP049776)
ENST00000269586.12	MANE_select
ENST00000394303.8	MANE_select
ENST00000394310.7	NP_954856.1
ENST00000344140.5	NP_954855.1
ENST00000225430.9	LR annotation
ENST00000225430.9	MANE_select
ENST00000678573.1	CAGE supported TSS
ENST00000333461.6	MANE_select
ENST00000264658.11	MANE_select
ENST00000583610.5	alternative 3' UTR
ENST00000394294.7	NP_001171835.1
ENST00000577399.5	upstream ATG
ENST00000647139.1	CAGE supported TSS
ENST00000654971.1	Assembled from SLRseq reads (SRP049776)
ENST00000300651.11	MANE_select
ENST00000447079.6	CAGE supported TSS
ENST00000447079.6	LR annotation
ENST00000447079.6	MANE_select
ENST00000584632.5	NAGNAG splice site
ENST00000615852.1	May be part of 3'UTR of upstream gene but no evidence to support this
ENST00000302584.5	MANE_select
ENST00000662516.1	Assembled from SLRseq reads (SRP049776)
ENST00000580825.5	alternative 5' UTR
ENST00000254079.9	MANE_select
ENST00000394265.5	alternative 5' UTR
ENST00000578254.5	NMD likely if extended
ENST00000578254.5	alternative 5' UTR
ENST00000544210.6	NP_001159409.1
ENST00000581894.5	alternative 5' UTR
ENST00000394250.8	NP_001159410.1
ENST00000336308.10	MANE_select
ENST00000577248.5	alternative 5' UTR
ENST00000583718.5	alternative 5' UTR
ENST00000580331.5	alternative 5' UTR
ENST00000583419.5	alternative 5' UTR
ENST00000443521.1	alternative 5' UTR
ENST00000460894.6	NMD likely if extended
ENST00000582874.1	NMD likely if extended
ENST00000309889.3	MANE_select
ENST00000269582.3	MANE_select
ENST00000300658.9	MANE_select
ENST00000269571.10	MANE_select
ENST00000578709.5	alternative 5' UTR
ENST00000584099.1	alternative 5' UTR
ENST00000394231.8	MANE_select
ENST00000309156.9	MANE_select
ENST00000394211.7	alternative 5' UTR
ENST00000578702.5	NMD likely if extended
ENST00000394209.6	alternative 5' UTR
ENST00000346872.8	MANE_select
ENST00000377952.6	NP_001244342.1
ENST00000346243.7	CCDS11351.1
ENST00000348931.9	MANE_select
ENST00000394175.6	non-canonical first splice acceptor
ENST00000579695.5	alternative 5' UTR
ENST00000304046.7	MANE_select
ENST00000394169.5	alternative 5' UTR
ENST00000301659.9	MANE_select
ENST00000577447.1	alternative 5' UTR
ENST00000264639.9	MANE_select
ENST00000394149.8	MANE_select
ENST00000579852.1	not organism-supported
ENST00000394148.7	NP_757374.2
ENST00000356271.7	alternative 5' UTR
ENST00000394128.7	MANE_select
ENST00000479829.5	NMD likely if extended
ENST00000585306.5	alternative 5' UTR
ENST00000580302.1	alternative 5' UTR
ENST00000577288.5	alternative 5' UTR
ENST00000585047.5	alternative 5' UTR
ENST00000578218.5	alternative 5' UTR
ENST00000394121.8	alternative 5' UTR
ENST00000450525.7	MANE_select
ENST00000546243.5	alternative 5' UTR
ENST00000246672.4	MANE_select
ENST00000398532.9	MANE_select
ENST00000264645.12	MANE_select
ENST00000456989.6	non canonical conserved
ENST00000543876.5	alternative 5' UTR
ENST00000543876.5	non canonical conserved
ENST00000544503.5	non canonical conserved
ENST00000264644.10	non canonical conserved
ENST00000538884.1	alternative 5' UTR
ENST00000538884.1	non canonical conserved
ENST00000620260.6	HsBN_lib11:Read_211032-Barcode%3DBC023:length%3D3637
ENST00000620260.6	MANE_select
ENST00000620260.6	non canonical conserved
ENST00000541245.1	non canonical conserved
ENST00000538981.1	alternative 5' UTR
ENST00000538981.1	non canonical conserved
ENST00000323571.9	MANE_select
ENST00000585043.5	alternative 5' UTR
ENST00000583130.5	alternative 5' UTR
ENST00000584296.1	alternative 5' UTR
ENST00000209728.9	LR annotation
ENST00000209728.9	MANE_select
ENST00000580824.5	alternative 5' UTR
ENST00000577249.1	alternative 5' UTR
ENST00000649662.1	alternative 5' UTR
ENST00000473555.1	alternative 5' UTR
ENST00000254066.10	MANE_select
ENST00000577646.5	alternative 5' UTR
ENST00000394089.6	alternative 5' UTR
ENST00000657921.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000578689.2	MANE_select
ENST00000423485.6	MANE_select
ENST00000269593.5	MANE_select
ENST00000254051.11	MANE_select
ENST00000662739.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000246657.2	MANE_select
ENST00000348513.12	MANE_select
ENST00000643318.1	alternative 5' UTR
ENST00000644701.1	alternative 3' UTR
ENST00000643683.1	alternative 5' UTR
ENST00000646856.1	alternative 3' UTR
ENST00000578044.6	confirm experimentally
ENST00000447024.6	alternative 3' UTR
ENST00000580654.6	alternative 5' UTR
ENST00000645663.1	NMD likely if extended
ENST00000577721.6	alternative 5' UTR
ENST00000582955.6	alternative 5' UTR
ENST00000474246.2	alternative 3' UTR
ENST00000643255.1	alternative 3' UTR
ENST00000394052.5	MANE_select
ENST00000264651.3	MANE_select
ENST00000312150.5	MANE_select
ENST00000301656.4	MANE_select
ENST00000306658.8	MANE_select
ENST00000269576.6	MANE_select
ENST00000301665.8	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668620.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668620.1	Assembled from SLRseq reads (SRP049776)
ENST00000666187.1	Assembled from SLRseq reads (SRP049776)
ENST00000654043.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662074.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671399.1	Assembled from SLRseq reads (SRP049776)
ENST00000670968.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000251643.5	CAGE supported TSS
ENST00000251643.5	LR annotation
ENST00000251643.5	MANE_select
ENST00000167588.4	MANE_select
ENST00000209718.8	MANE_select
ENST00000355612.7	MANE_select
ENST00000391586.3	MANE_select
ENST00000391587.3	MANE_select
ENST00000391588.3	MANE_select
ENST00000361883.6	MANE_select
ENST00000344363.7	MANE_select
ENST00000306271.5	MANE_select
ENST00000391419.3	MANE_select
ENST00000391418.3	MANE_select
ENST00000394015.3	MANE_select
ENST00000657137.1	Assembled from SLRseq reads (SRP049776)
ENST00000333822.4	not best-in-genome evidence
ENST00000391413.4	CCDS45675.1
ENST00000391413.4	MANE_select
ENST00000394014.2	MANE_select
ENST00000343246.6	MANE_select
ENST00000390661.5	MANE_select
ENST00000391356.4	MANE_select
ENST00000377726.3	MANE_select
ENST00000398470.1	MANE_select
ENST00000377721.3	MANE_select
ENST00000411528.4	MANE_select
ENST00000254072.7	MANE_select
ENST00000334109.3	MANE_select
ENST00000391353.1	MANE_select
ENST00000334202.5	MANE_select
ENST00000007735.4	MANE_select
ENST00000251646.8	MANE_select
ENST00000394001.2	upstream ATG
ENST00000251645.3	MANE_select
ENST00000225550.4	MANE_select
ENST00000246646.4	MANE_select
ENST00000225899.4	CCDS11393.1
ENST00000225899.4	MANE_select
ENST00000246635.8	MANE_select
ENST00000254043.8	MANE_select
ENST00000361566.7	MANE_select
ENST00000246662.9	MANE_select
ENST00000167586.7	MANE_select
ENST00000301653.9	MANE_select
ENST00000311208.13	CAGE supported TSS
ENST00000311208.13	LR annotation
ENST00000311208.13	MANE_select
ENST00000469257.2	MANE_select
ENST00000329402.4	MANE_select
ENST00000347901.9	MANE_select
ENST00000310778.5	P54257.3
ENST00000393930.5	alternative 5' UTR
ENST00000393931.8	MANE_select
ENST00000449889.5	alternative 5' UTR
ENST00000437187.5	alternative 5' UTR
ENST00000420370.5	alternative 5' UTR
ENST00000424457.5	alternative 5' UTR
ENST00000591690.5	alternative 5' UTR
ENST00000437369.5	alternative 5' UTR
ENST00000355468.7	QC splicing correct
ENST00000393928.6	MANE_select
ENST00000393928.6	genebuild_only_MANE
ENST00000590496.1	alternative 5' UTR
ENST00000585922.5	alternative 5' UTR
ENST00000321562.9	MANE_select
ENST00000435506.7	MANE_select
ENST00000448203.2	alternative 5' UTR
ENST00000485613.1	NMD likely if extended
ENST00000293303.5	MANE_select
ENST00000319121.4	MANE_select
ENST00000590151.5	alternative 5' UTR
ENST00000352035.7	MANE_select
ENST00000592970.1	alternative 5' UTR
ENST00000377540.6	MANE_select
ENST00000591945.1	NMD likely if extended
ENST00000393892.8	MANE_select
ENST00000592446.1	NMD likely if extended
ENST00000441615.2	alternative 5' UTR
ENST00000457167.9	MANE_select
ENST00000426588.7	alternative 5' UTR
ENST00000674504.1	alternative 3' UTR
ENST00000674472.1	alternative 3' UTR
ENST00000674166.1	alternative 5' UTR
ENST00000590774.6	alternative 5' UTR
ENST00000674303.1	alternative 5' UTR
ENST00000674252.1	alternative 5' UTR
ENST00000674287.1	CAGE supported TSS
ENST00000674287.1	alternative 5' UTR
ENST00000674497.1	alternative 5' UTR
ENST00000674175.1	alternative 3' UTR
ENST00000590886.7	CAGE supported TSS
ENST00000589586.6	alternative 5' UTR
ENST00000589773.5	alternative 5' UTR
ENST00000591787.1	alternative 5' UTR
ENST00000585955.5	alternative 5' UTR
ENST00000307641.9	alternative 5' UTR
ENST00000393885.9	MANE_select
ENST00000393880.5	alternative 5' UTR
ENST00000393881.7	alternative 5' UTR
ENST00000461831.1	CAGE supported TSS
ENST00000461831.1	overlapping uORF
ENST00000436535.4	QC splicing correct
ENST00000587304.3	CAGE supported TSS
ENST00000587304.3	MANE_select
ENST00000251642.8	MANE_select
ENST00000413196.6	alternative 5' UTR
ENST00000430773.1	alternative 5' UTR
ENST00000225916.10	MANE_select
ENST00000565659.2	MANE_select
ENST00000346213.9	MANE_select
ENST00000552162.5	alternative 5' UTR
ENST00000550504.5	alternative 5' UTR
ENST00000550406.1	alternative 5' UTR
ENST00000607371.5	NMD exception
ENST00000607371.5	alternative 3' UTR
ENST00000264661.4	MANE_select
ENST00000264661.4	NMD exception
ENST00000293330.1	MANE_select
ENST00000587427.6	MANE_select
ENST00000301671.12	alternative 5' UTR
ENST00000590249.5	alternative 5' UTR
ENST00000588352.5	alternative 5' UTR
ENST00000586692.5	NMD likely if extended
ENST00000590520.5	NMD likely if extended
ENST00000293328.8	MANE_select
ENST00000415845.1	alternative 5' UTR
ENST00000597755.2	extended 3' using psl_CRG_3prime_testis_all and psl_CRG_3prime_brain_all
ENST00000546010.6	align_id:3618858|asmbl_109023
ENST00000676631.1	align_id:3618863|asmbl_109028
ENST00000677893.1	align_id:3618859|asmbl_109024
ENST00000590949.6	MANE_select
ENST00000590949.6	alternative 5' UTR
ENST00000676585.1	alternative 5' UTR
ENST00000588868.5	align_id:3618860|asmbl_109025
ENST00000677301.1	CAGE supported TSS
ENST00000587646.2	align_id:3618868|asmbl_109033
ENST00000264657.10	MANE_select
ENST00000678960.1	align_id:3618872|asmbl_109037
ENST00000678906.1	align_id:3618873|asmbl_109038
ENST00000678906.1	upstream ATG
ENST00000678044.1	NAGNAG splice site
ENST00000678044.1	align_id:3618871|asmbl_109036
ENST00000679231.1	align_id:3618896|asmbl_109061
ENST00000677421.1	align_id:3618882|asmbl_109047
ENST00000678048.1	align_id:3618885|asmbl_109050
ENST00000678674.1	align_id:3618893|asmbl_109058
ENST00000678445.1	align_id:3618889|asmbl_109054
ENST00000678913.1	align_id:3618880|asmbl_109045
ENST00000678764.1	align_id:3618890|asmbl_109055
ENST00000678792.1	align_id:3618881|asmbl_109046
ENST00000679166.1	align_id:3618886|asmbl_109051
ENST00000677442.1	align_id:3618891|asmbl_109056
ENST00000677723.1	align_id:3618878|asmbl_109043
ENST00000678043.1	align_id:3618887|asmbl_109052
ENST00000679014.1	align_id:3618874|asmbl_109039
ENST00000677030.1	align_id:3618876|asmbl_109041
ENST00000676636.1	align_id:3618899|asmbl_109064
ENST00000678572.1	align_id:3618897|asmbl_109062
ENST00000677271.1	align_id:3618900|asmbl_109065
ENST00000678905.1	align_id:3618901|asmbl_109066
ENST00000677479.1	align_id:3618888|asmbl_109053
ENST00000677820.1	align_id:3618898|asmbl_109063
ENST00000679185.1	align_id:3618884|asmbl_109049
ENST00000678827.1	NAGNAG splice site
ENST00000678827.1	align_id:3618879|asmbl_109044
ENST00000677346.1	align_id:1320970|asmbl_40873
ENST00000677346.1	pacbio_cs_merged_multi
ENST00000491272.2	CAGE supported TSS
ENST00000491272.2	align_id:1320969|asmbl_40872
ENST00000491272.2	pacbio_cs_merged_multi
ENST00000677500.1	CAGE supported TSS
ENST00000677500.1	align_id:1320978|asmbl_40881
ENST00000677002.1	align_id:1320968|asmbl_40871
ENST00000677152.1	align_id:1320974|asmbl_40877
ENST00000677308.1	align_id:3618903|asmbl_109068
ENST00000389272.7	align_id:3618875|asmbl_109040
ENST00000588969.5	alternative 5' UTR
ENST00000677763.1	align_id:1320973|asmbl_40876
ENST00000677763.1	pacbio_cs_merged_multi
ENST00000677270.1	align_id:3618911|asmbl_109076
ENST00000678659.1	align_id:3618904|asmbl_109069
ENST00000678108.1	align_id:3618905|asmbl_109070
ENST00000678529.1	align_id:3618908|asmbl_109073
ENST00000357037.6	MANE_select
ENST00000343619.9	MANE_select
ENST00000587824.5	alternative 5' UTR
ENST00000589213.1	alternative 5' UTR
ENST00000225927.7	MANE_select
ENST00000585572.1	NMD likely if extended
ENST00000585807.6	MANE_select
ENST00000585811.1	alternative 5' UTR
ENST00000585909.1	alternative 5' UTR
ENST00000586771.1	alternative 5' UTR
ENST00000393818.3	MANE_select
ENST00000393818.3	alternative 5' UTR
ENST00000587858.5	alternative 5' UTR
ENST00000587214.1	alternative 5' UTR
ENST00000435881.7	MANE_select
ENST00000393795.8	MANE_select
ENST00000655617.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000309428.10	MANE_select
ENST00000251413.8	MANE_select
ENST00000251412.8	MANE_select
ENST00000591022.6	MANE_select
ENST00000592974.5	NMD likely if extended
ENST00000332438.4	MANE_select
ENST00000264638.9	MANE_select
ENST00000428826.7	MANE_select
ENST00000428826.7	alternative 5' UTR
ENST00000593214.5	alternative 5' UTR
ENST00000592492.5	alternative 5' UTR
ENST00000662231.1	Assembled from SLRseq reads (SRP049776)
ENST00000253796.10	MANE_select
ENST00000253794.7	MANE_select
ENST00000246914.10	MANE_select
ENST00000587705.5	NMD likely if extended
ENST00000328434.8	MANE_select
ENST00000588408.6	MANE_select
ENST00000591559.5	NMD likely if extended
ENST00000361523.8	alternative 5' UTR
ENST00000590099.6	MANE_select
ENST00000589636.5	alternative 5' UTR
ENST00000612631.1	alternative 5' UTR
ENST00000545225.5	alternative 5' UTR
ENST00000590720.6	MANE_select
ENST00000293362.7	CCDS11442.1
ENST00000253799.8	MANE_select
ENST00000308423.7	MANE_select
ENST00000301683.7	FLJ31222
ENST00000253801.7	MANE_select
ENST00000253801.7	upstream ATG
ENST00000585489.1	not organism-supported
ENST00000427569.7	MANE_select
ENST00000474578.1	non canonical TEC
ENST00000409399.6	upstream ATG
ENST00000421990.7	alternative 5' UTR
ENST00000421990.7	upstream ATG
ENST00000423601.2	upstream ATG
ENST00000454303.1	alternative 5' UTR
ENST00000591916.7	MANE_select
ENST00000409446.8	upstream ATG
ENST00000589037.5	alternative 5' UTR
ENST00000253788.12	CAGE supported TSS
ENST00000253788.12	LR annotation
ENST00000253788.12	MANE_select
ENST00000589913.6	CAGE supported TSS
ENST00000589913.6	alternative 5' UTR
ENST00000438323.2	QC splicing correct
ENST00000415816.7	MANE_select
ENST00000534876.1	QC splicing correct
ENST00000592388.1	alternative 5' UTR
ENST00000355653.8	MANE_select
ENST00000587062.1	alternative 5' UTR
ENST00000587250.4	MANE_select
ENST00000357654.9	LR annotation
ENST00000357654.9	MANE_select
ENST00000471181.7	LR annotation
ENST00000471181.7	NAGNAG splice site
ENST00000471181.7	QC splicing correct
ENST00000468300.5	NAGNAG splice site
ENST00000644379.1	NAGNAG splice site
ENST00000491747.6	NAGNAG splice site
ENST00000491747.6	NP_009229.2
ENST00000461574.1	NAGNAG splice site
ENST00000634433.1	alternative 5' UTR
ENST00000470026.5	alternative 5' UTR
ENST00000494123.5	alternative 5' UTR
ENST00000489037.1	alternative 5' UTR
ENST00000644555.1	alternative 5' UTR
ENST00000618469.1	alternative 5' UTR
ENST00000657841.1	Assembled from SLRseq reads (SRP049776)
ENST00000659136.1	Assembled from SLRseq reads (SRP049776)
ENST00000653081.1	Assembled from SLRseq reads (SRP049776)
ENST00000586650.5	alternative 5' UTR
ENST00000590996.6	MANE_select
ENST00000590996.6	alternative 5' UTR
ENST00000589872.1	alternative 5' UTR
ENST00000588693.5	alternative 5' UTR
ENST00000588659.5	alternative 5' UTR
ENST00000536052.5	alternative 5' UTR
ENST00000612339.4	MANE_select
ENST00000608223.1	nested 454 RNA-Seq supported
ENST00000663186.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664824.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658096.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662750.1	Assembled from SLRseq reads (SRP049776)
ENST00000661340.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000658754.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658202.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662582.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665553.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662853.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656132.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667855.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664287.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656704.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666319.1	Assembled from SLRseq reads (SRP049776)
ENST00000658683.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000588654.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000320033.5	MANE_select
ENST00000650571.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000262415.8	MANE_select
ENST00000319349.10	MANE_select
ENST00000545089.5	alternative 5' UTR
ENST00000591713.5	alternative 5' UTR
ENST00000318579.9	MANE_select
ENST00000593169.2	Assembled from SLRseq reads (SRP049776)
ENST00000301691.3	CAGE supported TSS
ENST00000301691.3	LR annotation
ENST00000301691.3	MANE_select
ENST00000226004.8	MANE_select
ENST00000449302.8	MANE_select
ENST00000398389.9	MANE_select
ENST00000317310.5	MANE_select
ENST00000269095.9	MANE_select
ENST00000461854.5	non canonical polymorphism
ENST00000520406.5	alternative 5' UTR
ENST00000523762.5	alternative 5' UTR
ENST00000523934.5	alternative 5' UTR
ENST00000521178.5	alternative 5' UTR
ENST00000522172.5	alternative 5' UTR
ENST00000518478.1	alternative 5' UTR
ENST00000225992.8	MANE_select
ENST00000293404.8	MANE_select
ENST00000206380.8	MANE_select
ENST00000206380.8	genebuild_only_MANE
ENST00000293406.8	MANE_select
ENST00000269097.9	CAGE supported TSS
ENST00000269097.9	MANE_select
ENST00000585683.6	MANE_select
ENST00000585683.6	NAGNAG splice site
ENST00000293414.6	MANE_select
ENST00000588785.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000585457.6	Assembled from SLRseq reads (SRP049776)
ENST00000656516.1	Assembled from SLRseq reads (SRP049776)
ENST00000669052.1	Assembled from SLRseq reads (SRP049776)
ENST00000667684.1	Assembled from SLRseq reads (SRP049776)
ENST00000667107.1	Assembled from SLRseq reads (SRP049776)
ENST00000538716.7	MANE_select
ENST00000587097.5	alternative 5' UTR
ENST00000590169.5	alternative 5' UTR
ENST00000589805.1	alternative 5' UTR
ENST00000436088.6	MANE_select
ENST00000436088.6	alternative 5' UTR
ENST00000527034.5	NAGNAG splice site
ENST00000527034.5	QC splicing correct
ENST00000533177.5	alternative 5' UTR
ENST00000393606.7	alternative 5' UTR
ENST00000526094.5	alternative 5' UTR
ENST00000529383.5	alternative 5' UTR
ENST00000537550.1	not organism-supported
ENST00000262418.12	MANE_select
ENST00000666090.1	Assembled from SLRseq reads (SRP049776)
ENST00000655016.1	Assembled from SLRseq reads (SRP049776)
ENST00000426726.8	MANE_select
ENST00000377095.10	MANE_select
ENST00000590194.5	alternative 5' UTR
ENST00000586633.5	alternative 5' UTR
ENST00000592857.5	alternative 5' UTR
ENST00000585523.1	alternative 5' UTR
ENST00000589536.5	alternative 5' UTR
ENST00000587109.5	alternative 5' UTR
ENST00000587518.5	alternative 5' UTR
ENST00000588143.5	alternative 5' UTR
ENST00000593167.5	alternative 5' UTR
ENST00000585512.5	alternative 5' UTR
ENST00000591740.5	alternative 5' UTR
ENST00000592783.5	alternative 5' UTR
ENST00000053867.8	MANE_select
ENST00000589923.1	NMD likely if extended
ENST00000293443.12	MANE_select
ENST00000648408.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000262407.6	MANE_select
ENST00000591680.6	MANE_select
ENST00000315323.5	MANE_select
ENST00000592909.1	LOC728675
ENST00000409122.7	MANE_select
ENST00000432494.1	alternative 5' UTR
ENST00000456912.1	alternative 5' UTR
ENST00000315286.13	MANE_select
ENST00000315286.13	non canonical U12
ENST00000457422.6	QC splicing correct
ENST00000457422.6	non canonical TEC
ENST00000588210.1	non canonical U12
ENST00000315005.8	MANE_select
ENST00000526915.5	NMD likely if extended
ENST00000200557.11	MANE_select
ENST00000587773.1	non canonical TEC
ENST00000591137.1	DA869411.1
ENST00000592524.6	MANE_select
ENST00000592524.6	alternative 5' UTR
ENST00000330514.4	alternative 5' UTR
ENST00000591424.5	alternative 5' UTR
ENST00000587239.5	alternative 5' UTR
ENST00000586267.1	alternative 5' UTR
ENST00000591513.5	alternative 5' UTR
ENST00000253410.3	MANE_select
ENST00000590423.1	NMD likely if extended
ENST00000426333.7	MANE_select
ENST00000591382.5	alternative 5' UTR
ENST00000402521.7	NP_001136077
ENST00000593072.5	alternative 5' UTR
ENST00000592701.2	alternative 5' UTR
ENST00000592701.2	upstream ATG
ENST00000577339.5	alternative 5' UTR
ENST00000577339.5	confirm experimentally
ENST00000410006.6	alternative 5' UTR
ENST00000357776.6	alternative 5' UTR
ENST00000417826.3	MANE_select
ENST00000588735.3	MANE_select
ENST00000639243.1	alternative 3' UTR
ENST00000639369.1	alternative 3' UTR
ENST00000640859.1	alternative 3' UTR
ENST00000638281.1	confirm experimentally
ENST00000588316.1	not organism-supported
ENST00000593179.1	alternative 5' UTR
ENST00000593135.6	MANE_select
ENST00000258960.7	MANE_select
ENST00000258960.7	genebuild_only_MANE
ENST00000585561.5	330614
ENST00000253407.4	MANE_select
ENST00000452796.6	alternative 5' UTR
ENST00000651974.1	MANE_select
ENST00000651974.1	genebuild_only_MANE
ENST00000588499.5	alternative 5' UTR
ENST00000593094.1	alternative 5' UTR
ENST00000619929.5	MANE_select
ENST00000619929.5	non canonical U12
ENST00000619929.5	suspected genomic sequence error affecting CDS in exon 10
ENST00000590644.5	non canonical U12
ENST00000538093.1	non canonical U12
ENST00000544446.1	NMD likely if extended
ENST00000587111.5	non canonical TEC
ENST00000591859.5	alternative 5' UTR
ENST00000591859.5	non canonical TEC
ENST00000321854.13	MANE_select
ENST00000332499.4	MANE_select
ENST00000585340.1	downstream ATG
ENST00000593138.5	alternative 5' UTR
ENST00000586681.5	alternative 5' UTR
ENST00000589230.5	alternative 5' UTR
ENST00000591576.5	alternative 5' UTR
ENST00000591070.5	alternative 5' UTR
ENST00000592695.1	alternative 5' UTR
ENST00000670229.1	Assembled from SLRseq reads (SRP049776)
ENST00000331495.8	MANE_select
ENST00000657572.1	Assembled from SLRseq reads (SRP049776)
ENST00000655903.1	Assembled from SLRseq reads (SRP049776)
ENST00000590100.6	Assembled from SLRseq reads (SRP049776)
ENST00000588698.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000586450.6	Assembled from SLRseq reads (SRP049776)
ENST00000663374.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000331780.5	MANE_select
ENST00000344686.8	CAGE supported TSS
ENST00000344686.8	LR annotation
ENST00000344686.8	MANE_select
ENST00000376926.8	alternative 5' UTR
ENST00000617331.3	alternative 5' UTR
ENST00000430334.8	MANE_select
ENST00000446609.6	alternative 5' UTR
ENST00000582119.5	NMD likely if extended
ENST00000586562.5	NMD likely if extended
ENST00000661058.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000650501.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000314537.10	MANE_select
ENST00000583888.1	not organism-supported
ENST00000535778.2	not organism-supported
ENST00000653949.1	Assembled from SLRseq reads (SRP049776)
ENST00000649665.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000329196.7	MANE_select
ENST00000262410.10	CAGE supported TSS
ENST00000262410.10	MANE_select
ENST00000570299.5	NMD likely if extended
ENST00000431008.7	PubMed=2484340
ENST00000431008.7	confirm experimentally
ENST00000571987.5	PMID:1420178
ENST00000571987.5	confirm experimentally
ENST00000574436.5	PubMed=2484340
ENST00000574436.5	confirm experimentally
ENST00000537309.1	MANE_select
ENST00000572218.5	NAGNAG splice site
ENST00000432791.7	MANE_select
ENST00000432791.7	NAGNAG splice site
ENST00000572904.6	NAGNAG splice site
ENST00000572904.6	alternative 5' UTR
ENST00000574590.6	NP_001180394.1
ENST00000638275.1	alternative 5' UTR
ENST00000576870.5	NAGNAG splice site
ENST00000262419.10	NAGNAG splice site
ENST00000262419.10	alternative 5' UTR
ENST00000648792.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000639805.1	non canonical TEC
ENST00000639467.1	NAGNAG splice site
ENST00000638551.1	NAGNAG splice site
ENST00000638291.1	NAGNAG splice site
ENST00000639531.1	NAGNAG splice site
ENST00000639150.1	NAGNAG splice site
ENST00000576137.2	NAGNAG splice site
ENST00000640636.1	NAGNAG splice site
ENST00000571698.2	alternative 5' UTR
ENST00000639279.1	NMD likely if extended
ENST00000639356.1	non canonical polymorphism
ENST00000576739.2	alternative 5' UTR
ENST00000656849.1	alternative 3' UTR
ENST00000572991.5	QC splicing correct
ENST00000575960.5	QC splicing correct
ENST00000450673.4	MANE_select
ENST00000336125.6	MANE_select
ENST00000398238.8	MANE_select
ENST00000225512.6	MANE_select
ENST00000290015.7	MANE_select
ENST00000638634.1	NAGNAG splice site
ENST00000415811.7	NAGNAG splice site
ENST00000573224.2	NP_001308062.1
ENST00000638838.1	NAGNAG splice site
ENST00000640443.1	alternative 5' UTR
ENST00000640051.2	CAGE supported TSS
ENST00000640051.2	MANE_select
ENST00000639066.1	NMD likely if extended
ENST00000638219.1	alternative 3' UTR
ENST00000640495.1	alternative 5' UTR
ENST00000639287.1	alternative 5' UTR
ENST00000640138.1	alternative 5' UTR
ENST00000640068.1	alternative 5' UTR
ENST00000393456.7	NP_001308063.1
ENST00000640866.1	alternative 3' UTR
ENST00000639822.1	NMD likely if extended
ENST00000322329.5	MANE_select
ENST00000668245.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656035.1	Assembled from SLRseq reads (SRP049776)
ENST00000655083.1	Assembled from SLRseq reads (SRP049776)
ENST00000670688.1	Assembled from SLRseq reads (SRP049776)
ENST00000663416.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663847.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660600.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000570314.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660267.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669500.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662706.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660448.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000571143.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655133.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663210.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663210.1	Assembled from SLRseq reads (SRP049776)
ENST00000653193.1	Assembled from SLRseq reads (SRP049776)
ENST00000659775.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668766.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661492.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000575173.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666536.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653065.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668604.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658121.1	Assembled from SLRseq reads (SRP049776)
ENST00000573341.6	Assembled from SLRseq reads (SRP049776)
ENST00000667718.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670987.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000066544.8	MANE_select
ENST00000531206.5	NP_001107563
ENST00000525495.6	NMD likely if extended
ENST00000575830.2	not organism-supported
ENST00000576484.1	not organism-supported
ENST00000647948.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000572316.5	alternative 5' UTR
ENST00000576874.5	alternative 5' UTR
ENST00000536623.6	alternative 5' UTR
ENST00000393450.5	MANE_select
ENST00000570671.1	alternative 3' UTR
ENST00000559488.7	MANE_select
ENST00000523285.5	alternative 5' UTR
ENST00000331493.7	MANE_select
ENST00000519772.5	alternative 5' UTR
ENST00000525037.5	not best-in-genome evidence
ENST00000677710.1	align_id:3620519|asmbl_110684
ENST00000526247.6	non canonical polymorphism
ENST00000526247.6	non-canonical splice acceptor site at exon 4; possibly SNP rs2610393
ENST00000677226.1	align_id:3620493|asmbl_110658
ENST00000532729.6	PacBio_Alzheimer_Brain
ENST00000678461.1	align_id:3620490|asmbl_110655
ENST00000322157.9	MANE_select
ENST00000533573.5	NMD likely if extended
ENST00000677120.1	align_id:3620499|asmbl_110664
ENST00000678496.1	align_id:3620520|asmbl_110685
ENST00000678262.1	align_id:3620506|asmbl_110671
ENST00000677370.1	align_id:3620505|asmbl_110670
ENST00000678902.1	align_id:1321498|asmbl_41401
ENST00000583648.6	alternative 5' UTR
ENST00000290158.9	MANE_select
ENST00000577875.5	alternative 5' UTR
ENST00000540627.5	alternative 5' UTR
ENST00000582126.1	not organism-supported
ENST00000578982.5	alternative 5' UTR
ENST00000537587.6	alternative 5' UTR
ENST00000177694.2	MANE_select
ENST00000007414.8	MANE_select
ENST00000351111.7	MANE_select
ENST00000290208.11	alternative 5' UTR
ENST00000269025.9	MANE_select
ENST00000290216.14	MANE_select
ENST00000584123.5	downstream ATG
ENST00000583090.1	upstream ATG
ENST00000578323.1	alternative 5' UTR
ENST00000536300.2	MANE_select
ENST00000536300.2	alternative 5' UTR
ENST00000582787.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000376741.5	MANE_select
ENST00000642017.2	MANE_select
ENST00000641856.1	alternative 3' UTR
ENST00000585320.5	alternative 3' UTR
ENST00000583245.6	NMD likely if extended
ENST00000641703.1	alternative 3' UTR
ENST00000300557.3	MANE_select
ENST00000581708.5	NMD likely if extended
ENST00000338399.9	MANE_select
ENST00000584592.5	NMD likely if extended
ENST00000578134.5	NMD likely if extended
ENST00000621465.5	MANE_select
ENST00000621465.5	suspected genomic sequence error affecting CDS in exon 1
ENST00000612370.4	suspected genomic sequence error affecting CDS in exon 1
ENST00000579889.1	alternative 5' UTR
ENST00000584137.5	alternative 5' UTR
ENST00000362042.8	MANE_select
ENST00000357480.9	alternative 5' UTR
ENST00000585062.1	alternative 5' UTR
ENST00000581441.1	alternative 5' UTR
ENST00000579537.5	alternative 5' UTR
ENST00000577411.5	alternative 5' UTR
ENST00000584634.5	alternative 5' UTR
ENST00000580050.1	alternative 5' UTR
ENST00000580037.1	alternative 5' UTR
ENST00000393408.7	alternative 5' UTR
ENST00000225603.9	MANE_select
ENST00000581003.5	alternative 5' UTR
ENST00000444685.1	alternative 5' UTR
ENST00000581298.5	alternative 5' UTR
ENST00000359238.7	MANE_select
ENST00000359238.7	alternative 5' UTR
ENST00000582104.5	alternative 5' UTR
ENST00000584335.5	alternative 5' UTR
ENST00000582481.1	alternative 5' UTR
ENST00000336915.11	MANE_select
ENST00000584924.5	alternative 3' UTR
ENST00000421610.2	In certain cancer cells this variant is subject to fusion with the THRA gene, elsewhere on chr17. The genomic rearrangement results in splicing of exon 7 of THRA to the first exon of  this gene. PubmedID 7511052
ENST00000239174.7	CAGE supported TSS
ENST00000239174.7	LR annotation
ENST00000239174.7	MANE_select
ENST00000330070.6	MANE_select
ENST00000498678.6	MANE_select
ENST00000498678.6	alternative 5' UTR
ENST00000311626.8	alternative 5' UTR
ENST00000476342.1	alternative 5' UTR
ENST00000480872.5	alternative 5' UTR
ENST00000332503.6	MANE_select
ENST00000239151.6	MANE_select
ENST00000225648.4	MANE_select
ENST00000225648.4	alternative 5' UTR
ENST00000239165.9	MANE_select
ENST00000567101.2	CAGE supported TSS
ENST00000239144.5	MANE_select
ENST00000576562.1	NAGNAG splice site
ENST00000311177.7	MANE_select
ENST00000669176.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000290294.5	MANE_select
ENST00000422730.4	MANE_select
ENST00000290295.8	MANE_select
ENST00000433608.6	downstream ATG
ENST00000393382.7	downstream ATG
ENST00000393382.7	non canonical conserved
ENST00000456415.1	alternative 5' UTR
ENST00000456415.1	non canonical conserved
ENST00000570513.5	alternative 5' UTR
ENST00000513119.5	alternative 5' UTR
ENST00000258947.8	MANE_select
ENST00000507076.1	alternative 5' UTR
ENST00000502761.1	alternative 5' UTR
ENST00000393366.7	MANE_select
ENST00000393366.7	alternative 5' UTR
ENST00000360943.10	MANE_select
ENST00000502492.6	MANE_select
ENST00000514929.1	Em:BF685140.1 -used until 727 only
ENST00000357424.2	MANE_select
ENST00000290341.8	MANE_select
ENST00000393354.7	MANE_select
ENST00000511277.5	alternative 5' UTR
ENST00000507680.6	MANE_select
ENST00000507680.6	alternative 5' UTR
ENST00000515635.5	alternative 5' UTR
ENST00000511673.1	alternative 5' UTR
ENST00000225941.6	MANE_select
ENST00000310544.9	MANE_select
ENST00000511066.5	alternative 5' UTR
ENST00000574638.1	alternative 5' UTR
ENST00000574638.1	non canonical U12
ENST00000512250.1	alternative 5' UTR
ENST00000668445.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656738.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662835.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659323.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670922.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659288.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666749.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662937.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661566.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654393.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658261.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666512.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000502951.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653971.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000511008.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659865.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663036.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655089.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430262.3	MANE_select
ENST00000430262.3	alternative 5' UTR
ENST00000502823.6	Assembled from SLRseq reads (SRP049776)
ENST00000507337.2	Assembled from SLRseq reads (SRP049776)
ENST00000511832.6	alternative 5' UTR
ENST00000511832.6	non canonical other
ENST00000300408.8	MANE_select
ENST00000419140.7	alternative 5' UTR
ENST00000617874.5	alternative 5' UTR
ENST00000504124.6	alternative 5' UTR
ENST00000614445.5	alternative 5' UTR
ENST00000508009.6	align_id:3620833|asmbl_110998
ENST00000512041.7	align_id:3620832|asmbl_110997
ENST00000434917.3	align_id:3620834|asmbl_110999
ENST00000172229.8	MANE_select
ENST00000509200.5	alternative 5' UTR
ENST00000647923.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000328741.6	MANE_select
ENST00000504102.6	MANE_select
ENST00000504102.6	alternative 5' UTR
ENST00000665825.1	alternative 5' UTR
ENST00000514121.6	alternative 5' UTR
ENST00000509079.6	alternative 5' UTR
ENST00000503676.5	alternative 5' UTR
ENST00000505581.5	alternative 5' UTR
ENST00000507970.5	alternative 5' UTR
ENST00000510476.5	alternative 5' UTR
ENST00000508805.5	alternative 5' UTR
ENST00000451526.6	alternative 5' UTR
ENST00000240333.12	MANE_select
ENST00000240333.12	upstream ATG
ENST00000507773.6	upstream ATG
ENST00000502268.5	alternative 5' UTR
ENST00000515850.6	upstream ATG
ENST00000511763.6	upstream ATG
ENST00000240364.7	MANE_select
ENST00000259021.9	MANE_select
ENST00000509124.5	NMD likely if extended
ENST00000506533.5	alternative 5' UTR
ENST00000240306.5	MANE_select
ENST00000434704.2	MANE_select
ENST00000320031.13	MANE_select
ENST00000007722.11	confirm experimentally
ENST00000508030.5	alternative 5' UTR
ENST00000503614.5	alternative 5' UTR
ENST00000503176.6	MANE_select
ENST00000505440.5	alternative 5' UTR
ENST00000512238.1	alternative 5' UTR
ENST00000330175.9	MANE_select
ENST00000511964.1	alternative 5' UTR
ENST00000612501.2	MANE_select
ENST00000262018.8	MANE_select
ENST00000225964.10	MANE_select
ENST00000509943.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662496.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654981.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670608.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661144.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655214.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000650459.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000514468.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000663981.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666820.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657387.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000507382.2	MANE_select
ENST00000507382.2	alternative 5' UTR
ENST00000017003.7	MANE_select
ENST00000225969.9	MANE_select
ENST00000511860.1	alternative 5' UTR
ENST00000338165.9	MANE_select
ENST00000225972.8	MANE_select
ENST00000300441.9	MANE_select
ENST00000506187.1	alternative 3' UTR
ENST00000508540.6	MANE_select
ENST00000258969.4	alternative 3' UTR
ENST00000258955.7	MANE_select
ENST00000323776.11	MANE_select
ENST00000323776.11	NP_115509.5
ENST00000323776.11	upstream ATG
ENST00000419930.2	upstream ATG
ENST00000452039.6	upstream ATG
ENST00000437498.2	upstream ATG
ENST00000654456.1	Assembled from SLRseq reads (SRP049776)
ENST00000503246.1	alternative 5' UTR
ENST00000503690.5	alternative 5' UTR
ENST00000514874.5	alternative 5' UTR
ENST00000268933.8	MANE_select
ENST00000507998.5	NMD likely if extended
ENST00000515126.1	alternative 5' UTR
ENST00000507467.1	alternative 5' UTR
ENST00000006658.11	MANE_select
ENST00000359106.10	MANE_select
ENST00000507510.6	non canonical U12
ENST00000570567.1	not organism-supported
ENST00000285238.13	MANE_select
ENST00000506464.5	NMD likely if extended
ENST00000285243.7	MANE_select
ENST00000508045.5	alternative 5' UTR
ENST00000504563.6	alternative 5' UTR
ENST00000240304.5	alternative 3' UTR
ENST00000505658.6	MANE_select
ENST00000510984.5	alternative 5' UTR
ENST00000507200.5	alternative 5' UTR
ENST00000450727.6	MANE_select
ENST00000648357.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000311378.5	MANE_select
ENST00000499247.3	MANE_select
ENST00000268957.3	alternative 5' UTR
ENST00000671267.1	Assembled from SLRseq reads (SRP049776)
ENST00000262013.12	MANE_select
ENST00000393196.8	MANE_select
ENST00000013034.3	alternative 5' UTR
ENST00000456492.1	alternative 5' UTR
ENST00000514264.6	alternative 5' UTR
ENST00000512737.6	MANE_select
ENST00000503064.5	alternative 5' UTR
ENST00000393190.4	alternative 5' UTR
ENST00000586178.6	MANE_select
ENST00000225298.12	MANE_select
ENST00000649531.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000441895.3	Assembled from SLRseq reads (SRP049776)
ENST00000663733.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654524.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662469.1	Assembled from SLRseq reads (SRP049776)
ENST00000650413.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000656686.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000592081.2	Assembled from SLRseq reads (SRP049776)
ENST00000663289.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451037.7	MANE_select
ENST00000451037.7	alternative 5' UTR
ENST00000575181.1	NAGNAG splice site
ENST00000575181.1	alternative 5' UTR
ENST00000573294.1	NMD likely if extended
ENST00000649605.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000650577.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000268919.6	MANE_select
ENST00000654899.1	Assembled from SLRseq reads (SRP049776)
ENST00000575882.6	MANE_select
ENST00000576370.5	alternative 3' UTR
ENST00000299335.8	MANE_select
ENST00000376352.6	MANE_select
ENST00000226067.10	MANE_select
ENST00000573945.5	alternative 5' UTR
ENST00000575345.5	alternative 5' UTR
ENST00000572002.1	NAGNAG splice site
ENST00000262065.8	MANE_select
ENST00000649377.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000636752.1	NMD exception
ENST00000424486.3	MANE_select
ENST00000571679.1	alternative 5' UTR
ENST00000268896.10	MANE_select
ENST00000332822.6	MANE_select
ENST00000397861.7	MANE_select
ENST00000397861.7	upstream uORF
ENST00000284061.8	MANE_select
ENST00000648772.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000316881.9	MANE_select
ENST00000240316.5	MANE_select
ENST00000262288.8	MANE_select
ENST00000571898.5	NMD likely if extended
ENST00000656535.1	Assembled from SLRseq reads (SRP049776)
ENST00000575322.1	alternative 5' UTR
ENST00000337714.8	MANE_select
ENST00000571629.5	alternative 5' UTR
ENST00000570423.5	alternative 5' UTR
ENST00000575186.5	alternative 5' UTR
ENST00000573085.1	alternative 5' UTR
ENST00000572814.1	alternative 5' UTR
ENST00000574683.1	alternative 3' UTR
ENST00000572557.5	alternative 5' UTR
ENST00000539273.5	alternative 5' UTR
ENST00000576591.1	alternative 5' UTR
ENST00000572156.1	alternative 5' UTR
ENST00000573326.1	not organism-supported
ENST00000649027.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000660832.1	Assembled from SLRseq reads (SRP049776)
ENST00000284073.7	MANE_select
ENST00000676345.1	CAGE supported TSS
ENST00000299415.3	MANE_select
ENST00000313608.13	MANE_select
ENST00000577830.6	MANE_select
ENST00000407144.6	alternative 5' UTR
ENST00000585294.5	alternative 3' UTR
ENST00000360238.6	alternative 5' UTR
ENST00000581208.2	MANE_select
ENST00000258962.5	MANE_select
ENST00000649559.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000579991.3	MANE_select
ENST00000641449.1	ENA ID EGAS00001001486
ENST00000545221.2	ENA ID EGAS00001001486
ENST00000545221.2	MANE_select
ENST00000545221.2	alternative 5' UTR
ENST00000225371.6	MANE_select
ENST00000678763.1	align_id:3621668|asmbl_111833
ENST00000678568.1	align_id:1321855|asmbl_41758
ENST00000678568.1	pacbio_cs_merged_multi
ENST00000313863.11	align_id:3621653|asmbl_111818
ENST00000393119.7	MANE_select
ENST00000675753.2	align_id:3621660|asmbl_111825
ENST00000677160.1	align_id:3621657|asmbl_111822
ENST00000678463.1	align_id:3621654|asmbl_111819
ENST00000677416.1	align_id:3621650|asmbl_111815
ENST00000677709.1	align_id:3621649|asmbl_111814
ENST00000678011.1	align_id:3621656|asmbl_111821
ENST00000677486.1	align_id:3621664|asmbl_111829
ENST00000676787.1	align_id:3621662|asmbl_111827
ENST00000678641.1	align_id:3621665|asmbl_111830
ENST00000677111.1	align_id:3621658|asmbl_111823
ENST00000678432.1	align_id:3621666|asmbl_111831
ENST00000580127.6	align_id:3621655|asmbl_111820
ENST00000585134.2	align_id:1321853|asmbl_41756
ENST00000585134.2	pacbio_cs_merged_multi
ENST00000581761.6	align_id:1321859|asmbl_41762
ENST00000581761.6	pacbio_cs_merged_multi
ENST00000677546.1	align_id:3621671|asmbl_111836
ENST00000678481.1	align_id:1321857|asmbl_41760
ENST00000678481.1	pacbio_cs_merged_multi
ENST00000677076.1	align_id:3621652|asmbl_111817
ENST00000677475.1	align_id:3621667|asmbl_111832
ENST00000679081.1	align_id:3621669|asmbl_111834
ENST00000678928.1	align_id:3621651|asmbl_111816
ENST00000676975.1	align_id:3621659|asmbl_111824
ENST00000678211.1	align_id:3621672|asmbl_111837
ENST00000581180.2	PacBio_RACEseq_UKGTN_Kidney_reads
ENST00000581180.2	m160409_012306_42182_c100987122550000001823224907191611_s1_p0/24720/ccs
ENST00000262290.9	MANE_select
ENST00000581008.1	alternative 5' UTR
ENST00000654179.1	Assembled from SLRseq reads (SRP049776)
ENST00000670144.1	Assembled from SLRseq reads (SRP049776)
ENST00000655053.1	Assembled from SLRseq reads (SRP049776)
ENST00000225275.4	MANE_select
ENST00000578493.1	NMD likely if extended
ENST00000580005.1	NMD likely if extended
ENST00000343736.9	MANE_select
ENST00000580669.6	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000667382.1	Assembled from SLRseq reads (SRP049776)
ENST00000656608.1	Assembled from SLRseq reads (SRP049776)
ENST00000581166.5	NMD likely if extended
ENST00000225504.8	MANE_select
ENST00000580947.1	alternative 5' UTR
ENST00000648873.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000584437.5	alternative 5' UTR
ENST00000407977.7	MANE_select
ENST00000407977.7	alternative 5' UTR
ENST00000323777.8	MANE_select
ENST00000578022.2	Assembled from SLRseq reads (SRP049776)
ENST00000426861.5	Evidence to support this protein PMID:21824006, 21992730, 15254396
ENST00000426861.5	NMD exception
ENST00000584528.5	NMD likely if extended
ENST00000349033.10	MANE_select
ENST00000337432.9	MANE_select
ENST00000308249.4	MANE_select
ENST00000262294.12	MANE_select
ENST00000330137.12	MANE_select
ENST00000578777.5	alternative 5' UTR
ENST00000577457.1	alternative 5' UTR
ENST00000262293.9	MANE_select
ENST00000580498.5	NMD likely if extended
ENST00000300917.10	MANE_select
ENST00000300917.10	align_id:3621959|asmbl_112124
ENST00000582469.1	not organism-supported
ENST00000284116.9	MANE_select
ENST00000312655.9	MANE_select
ENST00000585166.1	alternative 5' UTR
ENST00000665301.1	Assembled from SLRseq reads (SRP049776)
ENST00000584262.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000584262.6	Assembled from SLRseq reads (SRP049776)
ENST00000665757.1	Assembled from SLRseq reads (SRP049776)
ENST00000670915.1	Assembled from SLRseq reads (SRP049776)
ENST00000671404.1	Assembled from SLRseq reads (SRP049776)
ENST00000660347.1	Assembled from SLRseq reads (SRP049776)
ENST00000654551.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000577478.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000251241.9	MANE_select
ENST00000580030.1	not organism-supported
ENST00000611877.1	CAGE supported TSS
ENST00000269122.8	MANE_select
ENST00000393038.3	CAGE supported TSS
ENST00000393038.3	MANE_select
ENST00000470557.2	alternative 5' UTR
ENST00000262291.9	MANE_select
ENST00000592106.5	alternative 5' UTR
ENST00000591315.5	alternative 5' UTR
ENST00000587259.5	alternative 5' UTR
ENST00000591782.1	not organism-supported
ENST00000325752.8	MANE_select
ENST00000325752.8	genebuild_only_MANE
ENST00000591611.5	NMD likely if extended
ENST00000592145.1	alternative 5' UTR
ENST00000592145.1	downstream ATG
ENST00000225577.9	MANE_select
ENST00000305783.13	MANE_select
ENST00000589113.1	not organism-supported
ENST00000654621.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000184956.11	MANE_select
ENST00000587003.5	non canonical TEC
ENST00000591683.1	not organism-supported
ENST00000656205.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659112.1	Assembled from SLRseq reads (SRP049776)
ENST00000652174.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652174.2	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000658811.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668564.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666380.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655732.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670159.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661390.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667343.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661874.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662447.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665195.1	Assembled from SLRseq reads (SRP049776)
ENST00000654768.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667315.1	Assembled from SLRseq reads (SRP049776)
ENST00000663798.1	Assembled from SLRseq reads (SRP049776)
ENST00000670169.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655826.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000300900.9	MANE_select
ENST00000300896.9	MANE_select
ENST00000593071.1	not organism-supported
ENST00000461535.1	alternative 5' UTR
ENST00000269127.5	MANE_select
ENST00000083182.8	MANE_select
ENST00000590244.1	NMD likely if extended
ENST00000585368.1	alternative 5' UTR
ENST00000661567.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000305921.8	MANE_select
ENST00000588168.5	alternative 5' UTR
ENST00000407086.8	MANE_select
ENST00000591371.5	NMD likely if extended
ENST00000588462.5	confirm experimentally
ENST00000408905.7	confirm experimentally
ENST00000586705.5	alternative 5' UTR
ENST00000585744.5	confirm experimentally
ENST00000590128.5	alternative 5' UTR
ENST00000586484.1	alternative 5' UTR
ENST00000666957.1	Assembled from SLRseq reads (SRP049776)
ENST00000240328.4	MANE_select
ENST00000644296.1	LR annotation
ENST00000644296.1	MANE_select
ENST00000644296.1	NAGNAG splice site
ENST00000240335.1	NAGNAG splice site
ENST00000642491.1	NAGNAG splice site
ENST00000642491.1	alternative 5' UTR
ENST00000521764.3	MANE_select
ENST00000259008.7	MANE_select
ENST00000577598.5	confirm experimentally
ENST00000577913.1	alternative 5' UTR
ENST00000251334.7	MANE_select
ENST00000583076.1	alternative 5' UTR
ENST00000397786.7	MANE_select
ENST00000647929.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000305286.8	CAGE supported TSS
ENST00000305286.8	MANE_select
ENST00000520404.5	alternative 5' UTR
ENST00000518576.1	alternative 5' UTR
ENST00000311506.10	MANE_select
ENST00000583843.5	alternative 5' UTR
ENST00000579450.5	alternative 5' UTR
ENST00000577616.1	NMD likely if extended
ENST00000582195.5	alternative 5' UTR
ENST00000346027.10	MANE_select
ENST00000303375.10	MANE_select
ENST00000580916.1	NMD likely if extended
ENST00000655517.1	Assembled from SLRseq reads (SRP049776)
ENST00000660412.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663932.1	Assembled from SLRseq reads (SRP049776)
ENST00000579620.1	non canonical TEC
ENST00000456609.6	alternative 5' UTR
ENST00000311269.10	MANE_select
ENST00000583803.1	alternative 5' UTR
ENST00000658616.1	Assembled from SLRseq reads (SRP049776)
ENST00000650312.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000636248.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000604690.1	weak homology
ENST00000389520.8	confirm experimentally
ENST00000656935.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000392975.6	alternative 5' UTR
ENST00000360793.8	MANE_select
ENST00000581573.5	alternative 5' UTR
ENST00000542042.5	downstream ATG
ENST00000580691.5	downstream ATG
ENST00000582997.5	downstream ATG
ENST00000584291.5	alternative 5' UTR
ENST00000580592.1	not organism-supported
ENST00000584529.5	NMD likely if extended
ENST00000290866.10	MANE_select
ENST00000314672.10	MANE_select
ENST00000614556.5	MANE_select
ENST00000258975.7	MANE_select
ENST00000579585.5	alternative 5' UTR
ENST00000361733.8	MANE_select
ENST00000577784.1	NMD likely if extended
ENST00000639835.1	alternative 5' UTR
ENST00000336174.12	MANE_select
ENST00000640999.1	NP_001003786.1
ENST00000638702.1	alternative 5' UTR
ENST00000638698.1	alternative 5' UTR
ENST00000640741.1	upstream ATG
ENST00000638718.1	alternative 5' UTR
ENST00000581505.6	alternative 3' UTR
ENST00000579549.6	alternative 5' UTR
ENST00000639816.1	NMD likely if extended
ENST00000580338.5	alternative 5' UTR
ENST00000639778.1	NMD likely if extended
ENST00000582030.5	alternative 5' UTR
ENST00000580288.2	alternative 5' UTR
ENST00000584110.1	alternative 5' UTR
ENST00000259006.8	MANE_select
ENST00000578402.5	alternative 5' UTR
ENST00000578061.5	alternative 5' UTR
ENST00000582055.1	alternative 5' UTR
ENST00000584645.1	alternative 5' UTR
ENST00000580553.1	not organism-supported
ENST00000225726.10	MANE_select
ENST00000403162.7	alternative 5' UTR
ENST00000580986.1	alternative 5' UTR
ENST00000581135.5	alternative 5' UTR
ENST00000583590.5	alternative 5' UTR
ENST00000389924.7	MANE_select
ENST00000389924.7	genebuild_only_MANE
ENST00000359353.9	confirm experimentally
ENST00000427159.7	MANE_select
ENST00000580272.5	alternative 5' UTR
ENST00000581209.5	alternative 5' UTR
ENST00000584574.5	alternative 5' UTR
ENST00000585145.1	alternative 5' UTR
ENST00000310144.11	MANE_select
ENST00000581842.5	alternative 5' UTR
ENST00000584320.5	alternative 5' UTR
ENST00000585123.5	alternative 5' UTR
ENST00000580864.5	alternative 5' UTR
ENST00000448276.7	MANE_select
ENST00000577990.1	alternative 5' UTR
ENST00000560142.5	not best-in-genome evidence
ENST00000392886.7	MANE_select
ENST00000423893.7	MANE_select
ENST00000316193.13	MANE_select
ENST00000309894.6	MANE_select
ENST00000309894.6	not best-in-genome evidence
ENST00000323322.10	MANE_select
ENST00000647774.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000006750.8	MANE_select
ENST00000435607.3	MANE_select
ENST00000435607.3	non canonical U12
ENST00000657561.1	Assembled from SLRseq reads (SRP049776)
ENST00000662204.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000412177.6	MANE_select
ENST00000449662.6	alternative 5' UTR
ENST00000579788.6	MANE_select
ENST00000579687.5	alternative 5' UTR
ENST00000578313.5	alternative 5' UTR
ENST00000583366.5	NAGNAG splice site
ENST00000583366.5	alternative 5' UTR
ENST00000584084.1	alternative 5' UTR
ENST00000584403.5	NMD likely if extended
ENST00000433197.4	MANE_select
ENST00000680625.1	align_id:3622795|asmbl_112960
ENST00000660893.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000584379.6	MANE_select
ENST00000583097.5	alternative 5' UTR
ENST00000583922.1	alternative 5' UTR
ENST00000583738.1	alternative 5' UTR
ENST00000539111.7	MANE_select
ENST00000577506.5	NMD likely if extended
ENST00000225792.10	MANE_select
ENST00000450599.7	NAGNAG splice site
ENST00000450599.7	alternative 5' UTR
ENST00000577922.6	alternative 5' UTR
ENST00000585111.2	alternative 5' UTR
ENST00000583212.2	align_id:3622861|asmbl_113026
ENST00000581237.2	not organism-supported
ENST00000556440.7	MANE_select
ENST00000577476.5	NMD likely if extended
ENST00000262435.14	MANE_select
ENST00000585301.1	not organism-supported
ENST00000580919.5	QC splicing correct
ENST00000580919.5	non canonical TEC
ENST00000439174.7	MANE_select
ENST00000262406.10	MANE_select
ENST00000307078.10	MANE_select
ENST00000577278.1	alternative 5' UTR
ENST00000580513.1	alternative 5' UTR
ENST00000585045.1	alternative 5' UTR
ENST00000544103.2	alternative 5' UTR
ENST00000535342.7	MANE_select
ENST00000583358.1	alternative 5' UTR
ENST00000205948.11	MANE_select
ENST00000577982.1	alternative 5' UTR
ENST00000413366.8	MANE_select
ENST00000533854.6	CAGE supported TSS
ENST00000533854.6	LR annotation
ENST00000533854.6	MANE_select
ENST00000262138.4	MANE_select
ENST00000226021.5	MANE_select
ENST00000358691.10	MANE_select
ENST00000579953.5	NAGNAG splice site
ENST00000580168.5	NAGNAG splice site
ENST00000580662.5	NMD likely if extended
ENST00000581159.5	alternative 5' UTR
ENST00000579861.1	alternative 5' UTR
ENST00000650446.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000356126.8	MANE_select
ENST00000581618.1	NMD likely if extended
ENST00000581322.6	MANE_select
ENST00000581923.5	NMD likely if extended
ENST00000655554.1	Assembled from SLRseq reads (SRP049776)
ENST00000253247.9	MANE_select
ENST00000581966.5	NMD likely if extended
ENST00000306378.11	MANE_select
ENST00000582406.1	NMD likely if extended
ENST00000580729.3	CAGE supported TSS
ENST00000580729.3	MANE_select
ENST00000536693.1	alternative 5' UTR
ENST00000334461.7	CAGE supported TSS
ENST00000449250.3	CAGE supported TSS
ENST00000676857.1	align_id:1322448|asmbl_42351
ENST00000676594.1	align_id:1322449|asmbl_42352
ENST00000677827.1	align_id:1322460|asmbl_42363
ENST00000676622.1	align_id:1322462|asmbl_42365
ENST00000678054.1	align_id:1322455|asmbl_42358
ENST00000677918.1	align_id:3623320|asmbl_113485
ENST00000678388.1	align_id:3623296|asmbl_113461
ENST00000677695.1	align_id:3623323|asmbl_113488
ENST00000677223.1	align_id:3623322|asmbl_113487
ENST00000679346.1	align_id:3623309|asmbl_113474
ENST00000676902.1	align_id:3623318|asmbl_113483
ENST00000677419.1	align_id:3623300|asmbl_113465
ENST00000330459.8	MANE_select
ENST00000584026.6	align_id:1322438|asmbl_42341
ENST00000584026.6	alternative 5' UTR
ENST00000537025.6	alternative 5' UTR
ENST00000677086.1	align_id:3623255|asmbl_113420
ENST00000579754.2	align_id:3623255|asmbl_113420
ENST00000579754.2	alternative 5' UTR
ENST00000583392.2	align_id:3623385|asmbl_113550
ENST00000579629.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666251.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674770.2	CAGE supported TSS
ENST00000580548.5	alternative 5' UTR
ENST00000580753.5	alternative 5' UTR
ENST00000392720.6	alternative 5' UTR
ENST00000359904.8	MANE_select
ENST00000579724.5	alternative 5' UTR
ENST00000584494.5	alternative 5' UTR
ENST00000580837.5	alternative 5' UTR
ENST00000577866.5	alternative 5' UTR
ENST00000614046.1	CAGE supported TSS
ENST00000621439.5	MANE_select
ENST00000327268.8	alternative 5' UTR
ENST00000580666.6	MANE_select
ENST00000582867.1	alternative 5' UTR
ENST00000592645.5	alternative 3' UTR
ENST00000262139.10	MANE_select
ENST00000586815.1	NMD likely if extended
ENST00000589017.5	alternative 5' UTR
ENST00000358598.6	alternative 5' UTR
ENST00000585427.5	alternative 5' UTR
ENST00000589228.6	MANE_select
ENST00000536854.6	alternative 5' UTR
ENST00000588702.5	alternative 5' UTR
ENST00000589309.5	alternative 5' UTR
ENST00000585981.5	alternative 5' UTR
ENST00000589480.5	alternative 5' UTR
ENST00000585815.5	alternative 5' UTR
ENST00000586397.5	alternative 5' UTR
ENST00000588178.5	alternative 5' UTR
ENST00000585907.1	not organism-supported
ENST00000592554.2	MANE_select
ENST00000592847.1	NMD likely if extended
ENST00000586539.6	MANE_select
ENST00000585531.1	alternative 5' UTR
ENST00000340001.9	MANE_select
ENST00000585714.1	alternative 5' UTR
ENST00000284425.7	MANE_select
ENST00000522406.5	non canonical polymorphism
ENST00000521526.2	NMD likely if extended
ENST00000650511.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000392676.8	MANE_select
ENST00000588877.5	alternative 5' UTR
ENST00000593153.5	alternative 5' UTR
ENST00000592568.1	alternative 5' UTR
ENST00000588665.5	alternative 5' UTR
ENST00000590474.7	MANE_select
ENST00000589295.5	alternative 5' UTR
ENST00000665875.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659331.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000455460.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654711.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654068.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000649355.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000420427.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000591891.5	alternative 5' UTR
ENST00000283936.5	alternative 5' UTR
ENST00000392671.5	alternative 5' UTR
ENST00000615244.4	alternative 5' UTR
ENST00000392670.5	alternative 5' UTR
ENST00000587698.5	alternative 5' UTR
ENST00000587892.1	alternative 5' UTR
ENST00000243457.4	MANE_select
ENST00000243457.4	alternative 5' UTR
ENST00000659670.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665992.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662323.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662349.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668160.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669182.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659322.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667642.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668920.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664398.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671130.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664372.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669562.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670823.1	Assembled from SLRseq reads (SRP049776)
ENST00000430908.8	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000472655.4	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000472655.4	Assembled from SLRseq reads (SRP049776)
ENST00000538810.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655287.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656107.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662263.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662263.1	Assembled from SLRseq reads (SRP049776)
ENST00000664713.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653391.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656124.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655689.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655689.1	Assembled from SLRseq reads (SRP049776)
ENST00000657467.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655414.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668847.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653248.1	Assembled from SLRseq reads (SRP049776)
ENST00000659228.1	Assembled from SLRseq reads (SRP049776)
ENST00000666904.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671151.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668902.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659599.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662298.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656392.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663438.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000668782.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670181.1	Assembled from SLRseq reads (SRP049776)
ENST00000659146.1	Assembled from SLRseq reads (SRP049776)
ENST00000666489.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665568.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654175.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000245479.3	CAGE supported TSS
ENST00000245479.3	LR annotation
ENST00000245479.3	MANE_select
ENST00000580199.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650194.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000581183.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648672.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649440.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648104.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650289.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650602.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649595.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648623.2	Assembled from SLRseq reads (SRP049776)
ENST00000650131.2	Assembled from SLRseq reads (SRP049776)
ENST00000649793.2	Assembled from SLRseq reads (SRP049776)
ENST00000647706.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648176.2	Assembled from SLRseq reads (SRP049776)
ENST00000650550.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000581549.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647871.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656431.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664653.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663290.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000580557.5	alternative 5' UTR
ENST00000583146.5	alternative 5' UTR
ENST00000579018.5	alternative 5' UTR
ENST00000578620.1	alternative 5' UTR
ENST00000357585.4	MANE_select
ENST00000299886.9	MANE_select
ENST00000403627.7	FLJ14775, FLJ90274
ENST00000403627.7	NP_116226
ENST00000405159.7	NP_001092302
ENST00000577615.5	alternative 5' UTR
ENST00000585109.5	alternative 5' UTR
ENST00000582391.1	alternative 5' UTR
ENST00000344935.8	MANE_select
ENST00000397671.1	not organism-supported
ENST00000335793.4	MANE_select
ENST00000581014.1	not organism-supported
ENST00000580315.1	alternative 5' UTR
ENST00000579611.1	alternative 5' UTR
ENST00000582303.1	not organism-supported
ENST00000392650.8	MANE_select
ENST00000392650.8	NP_001138424.1
ENST00000650299.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000655723.1	Assembled from SLRseq reads (SRP049776)
ENST00000652907.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657088.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665734.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657440.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655526.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655592.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667712.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668259.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669327.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656457.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659097.1	Assembled from RACEseq reads
ENST00000647802.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000654301.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668167.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653467.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666198.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439590.6	alternative 5' UTR
ENST00000311111.11	MANE_select
ENST00000528433.2	alternative 5' UTR
ENST00000533498.1	alternative 5' UTR
ENST00000662857.1	Assembled from SLRseq reads (SRP049776)
ENST00000670574.1	Assembled from SLRseq reads (SRP049776)
ENST00000269346.9	MANE_select
ENST00000311014.11	MANE_select
ENST00000311014.11	NMD exception
ENST00000582036.5	NMD exception
ENST00000579490.5	NMD exception
ENST00000389916.5	MANE_select
ENST00000389916.5	NP_694941
ENST00000375366.4	MANE_select
ENST00000481232.2	upstream ATG
ENST00000392627.7	MANE_select
ENST00000392627.7	NP_071319.2
ENST00000392627.7	upstream ATG
ENST00000392629.3	upstream ATG
ENST00000581590.1	not organism-supported
ENST00000648095.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000648095.1	alternative 5' UTR
ENST00000360141.8	MANE_select
ENST00000392625.7	Not 100% match (98.3%) but is b-i-g. Most discrepancies are in 3' UTR. -clb 24-1-12
ENST00000392621.6	MANE_select
ENST00000392621.6	NP_777552.2
ENST00000392621.6	upstream ATG
ENST00000314401.3	upstream ATG
ENST00000330793.2	MANE_select
ENST00000375352.1	MANE_select
ENST00000524389.5	alternative 5' UTR
ENST00000392620.5	FLJ31882
ENST00000577560.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000392619.2	MANE_select
ENST00000392619.2	upstream ATG
ENST00000665064.1	Assembled from SLRseq reads (SRP049776)
ENST00000663016.1	Assembled from SLRseq reads (SRP049776)
ENST00000392614.8	NP_001157461.1
ENST00000392612.7	NP_001157462.1
ENST00000392613.10	MANE_select
ENST00000326165.11	MANE_select
ENST00000301573.13	NMD exception
ENST00000262613.10	MANE_select
ENST00000357814.8	MANE_select
ENST00000580301.5	NAGNAG splice site
ENST00000583476.5	NMD exception
ENST00000579218.5	alternative 5' UTR
ENST00000580216.5	NMD likely if extended
ENST00000583989.5	NMD likely if extended
ENST00000577428.5	NMD likely if extended
ENST00000584409.5	NMD likely if extended
ENST00000585240.5	NMD likely if extended
ENST00000578947.1	alternative 5' UTR
ENST00000335464.10	CAGE supported TSS
ENST00000335464.10	LR annotation
ENST00000335464.10	MANE_select
ENST00000582330.2	alternative 5' UTR
ENST00000293190.10	MANE_select
ENST00000293195.10	MANE_select
ENST00000612771.5	MANE_select
ENST00000612771.5	NP_835229.2
ENST00000614341.5	MANE_select
ENST00000580223.2	CAGE supported TSS
ENST00000331427.9	CAGE supported TSS
ENST00000331427.9	MANE_select
ENST00000328801.6	MANE_select
ENST00000328801.6	upstream uORF
ENST00000425042.7	MANE_select
ENST00000581676.1	not organism-supported
ENST00000337231.5	MANE_select
ENST00000301585.10	MANE_select
ENST00000322444.7	MANE_select
ENST00000301587.9	MANE_select
ENST00000578847.5	alternative 5' UTR
ENST00000585293.5	NMD likely if extended
ENST00000329783.9	MANE_select
ENST00000329783.9	alternative 5' UTR
ENST00000578376.5	alternative 5' UTR
ENST00000582048.1	NMD likely if extended
ENST00000450736.6	alternative 5' UTR
ENST00000584118.1	alternative 5' UTR
ENST00000245543.6	MANE_select
ENST00000245552.7	MANE_select
ENST00000579082.1	NMD likely if extended
ENST00000409753.8	MANE_select
ENST00000482348.5	alternative 5' UTR
ENST00000470924.5	alternative 5' UTR
ENST00000481647.5	alternative 5' UTR
ENST00000420826.7	MANE_select
ENST00000314523.7	NP_001005849.1
ENST00000245544.9	MANE_select
ENST00000583948.5	NMD likely if extended
ENST00000577208.5	NMD likely if extended
ENST00000583548.1	NMD likely if extended
ENST00000537686.6	MANE_select
ENST00000649398.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000584550.1	not organism-supported
ENST00000582717.5	NP_001166174.1
ENST00000578773.1	not organism-supported
ENST00000245539.11	MANE_select
ENST00000325102.13	MANE_select
ENST00000579297.5	NP_001229427.1
ENST00000577542.5	alternative 5' UTR
ENST00000579194.6	alternative 5' UTR
ENST00000579194.6	upstream uORF
ENST00000618645.5	alternative 5' UTR
ENST00000618645.5	upstream uORF
ENST00000649805.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000580717.5	alternative 5' UTR
ENST00000416858.7	MANE_select
ENST00000402418.7	alternative 5' UTR
ENST00000442286.6	alternative 5' UTR
ENST00000320362.7	alternative 5' UTR
ENST00000580994.5	alternative 5' UTR
ENST00000579207.5	alternative 5' UTR
ENST00000580151.5	alternative 5' UTR
ENST00000581988.5	alternative 5' UTR
ENST00000582778.1	alternative 5' UTR
ENST00000584438.1	alternative 5' UTR
ENST00000392563.5	NP_987102.1
ENST00000392564.5	alternative 5' UTR
ENST00000392562.5	alternative 5' UTR
ENST00000316804.10	MANE_select
ENST00000648046.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000582582.1	alternative 5' UTR
ENST00000577380.5	alternative 5' UTR
ENST00000314256.12	MANE_select
ENST00000582455.5	alternative 5' UTR
ENST00000581519.5	alternative 5' UTR
ENST00000584694.1	not organism-supported
ENST00000321617.8	MANE_select
ENST00000580075.1	alternative 5' UTR
ENST00000679370.1	align_id:3624343|asmbl_114508
ENST00000681282.1	align_id:3624350|asmbl_114515
ENST00000333213.11	MANE_select
ENST00000680528.1	align_id:3624341|asmbl_114506
ENST00000679928.1	align_id:3624349|asmbl_114514
ENST00000545228.3	align_id:3624354|asmbl_114519
ENST00000679782.1	align_id:3624352|asmbl_114517
ENST00000680999.1	align_id:3624355|asmbl_114520
ENST00000580013.6	align_id:3624344|asmbl_114509
ENST00000583818.2	align_id:3624359|asmbl_114524
ENST00000579449.2	align_id:3624342|asmbl_114507
ENST00000679919.1	align_id:3624356|asmbl_114521
ENST00000679443.1	align_id:3624353|asmbl_114518
ENST00000577197.2	align_id:3624357|asmbl_114522
ENST00000580578.5	alternative 5' UTR
ENST00000392550.8	MANE_select
ENST00000375227.8	alternative 5' UTR
ENST00000578363.5	NP_001015002.1
ENST00000579392.5	alternative 5' UTR
ENST00000577200.5	NAGNAG splice site
ENST00000578536.5	alternative 5' UTR
ENST00000580925.1	alternative 5' UTR
ENST00000581713.5	alternative 5' UTR
ENST00000642007.1	CAGE supported TSS
ENST00000423245.6	non canonical U12
ENST00000317905.10	MANE_select
ENST00000317905.10	non canonical U12
ENST00000578201.5	alternative 5' UTR
ENST00000340830.9	alternative 5' UTR
ENST00000340830.9	non canonical U12
ENST00000375215.3	MANE_select
ENST00000375215.3	NP_001156467
ENST00000537494.1	alternative 5' UTR
ENST00000556126.2	alternative 5' UTR
ENST00000579469.2	MANE_select
ENST00000579469.2	NP_001156469.1
ENST00000584667.6	MANE_select
ENST00000578354.5	NMD likely if extended
ENST00000579864.5	NMD likely if extended
ENST00000579662.5	alternative 5' UTR
ENST00000200181.8	MANE_select
ENST00000584558.5	NMD likely if extended
ENST00000584374.1	NMD likely if extended
ENST00000225614.6	alternative 3' UTR
ENST00000588479.6	MANE_select
ENST00000588479.6	upstream ATG
ENST00000254810.8	MANE_select
ENST00000593254.1	not organism-supported
ENST00000587560.5	alternative 5' UTR
ENST00000589599.5	alternative 5' UTR
ENST00000586607.5	alternative 5' UTR
ENST00000586270.5	alternative 5' UTR
ENST00000589666.6	MANE_select
ENST00000587258.1	not organism-supported
ENST00000589670.5	alternative 3' UTR
ENST00000207549.9	CAGE supported TSS
ENST00000207549.9	MANE_select
ENST00000586519.1	not organism-supported
ENST00000587504.5	NMD likely if extended
ENST00000585574.5	NMD likely if extended
ENST00000586108.1	alternative 5' UTR
ENST00000254806.8	MANE_select
ENST00000254806.8	genebuild_only_MANE
ENST00000590450.5	NMD likely if extended
ENST00000254816.6	MANE_select
ENST00000269383.8	MANE_select
ENST00000648382.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000309352.4	MANE_select
ENST00000410030.1	NMD likely if extended
ENST00000590264.5	alternative 3' UTR
ENST00000588478.1	not organism-supported
ENST00000293217.10	MANE_select
ENST00000587927.5	alternative 3' UTR
ENST00000591857.5	NMD likely if extended
ENST00000649294.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000397640.6	MANE_select
ENST00000397640.6	NP_001106795.2
ENST00000590676.1	alternative 5' UTR
ENST00000448471.2	alternative 5' UTR
ENST00000589231.1	alternative 3' UTR
ENST00000301607.8	MANE_select
ENST00000307877.7	MANE_select
ENST00000585539.1	NMD likely if extended
ENST00000334586.10	MANE_select
ENST00000329003.4	MANE_select
ENST00000589210.6	MANE_select
ENST00000411744.6	NP_001138770
ENST00000592559.1	not organism-supported
ENST00000322957.7	MANE_select
ENST00000662723.1	Assembled from SLRseq reads (SRP049776)
ENST00000269391.11	MANE_select
ENST00000327490.8	MANE_select
ENST00000446526.8	MANE_select
ENST00000588364.1	not organism-supported
ENST00000435555.6	alternative 5' UTR
ENST00000436498.6	alternative 5' UTR
ENST00000423915.1	alternative 5' UTR
ENST00000591651.5	alternative 5' UTR
ENST00000545180.5	alternative 5' UTR
ENST00000588682.5	alternative 5' UTR
ENST00000590379.5	alternative 5' UTR
ENST00000592299.6	MANE_select
ENST00000590959.5	NP_068807.2
ENST00000392496.3	alternative 5' UTR
ENST00000319380.12	MANE_select
ENST00000587127.1	NAGNAG splice site
ENST00000250615.7	NP_001160051.1
ENST00000392492.8	MANE_select
ENST00000675367.1	MANE_select
ENST00000675367.1	alternative 5' UTR
ENST00000592123.5	alternative 5' UTR
ENST00000592378.5	NMD likely if extended
ENST00000585989.5	alternative 5' UTR
ENST00000589526.5	alternative 5' UTR
ENST00000591697.5	alternative 5' UTR
ENST00000591879.1	alternative 5' UTR
ENST00000585701.5	alternative 5' UTR
ENST00000591192.1	alternative 5' UTR
ENST00000590322.1	alternative 5' UTR
ENST00000590288.1	alternative 5' UTR
ENST00000591255.5	alternative 5' UTR
ENST00000293230.10	MANE_select
ENST00000592014.6	MANE_select
ENST00000592014.6	NMD exception
ENST00000586148.1	NMD exception
ENST00000586148.1	alternative 3' UTR
ENST00000653677.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000493536.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670737.1	Assembled from SLRseq reads (SRP049776)
ENST00000667091.1	Assembled from SLRseq reads (SRP049776)
ENST00000586846.2	Assembled from SLRseq reads (SRP049776)
ENST00000586942.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661348.1	Assembled from SLRseq reads (SRP049776)
ENST00000668511.1	Assembled from SLRseq reads (SRP049776)
ENST00000587838.2	Assembled from SLRseq reads (SRP049776)
ENST00000640006.1	NMD exception
ENST00000225276.10	MANE_select
ENST00000654027.1	Assembled from SLRseq reads (SRP049776)
ENST00000156626.12	MANE_select
ENST00000589004.5	NMD likely if extended
ENST00000590878.1	NMD likely if extended
ENST00000612163.1	CAGE supported TSS
ENST00000397625.9	MANE_select
ENST00000341249.11	MANE_select
ENST00000592849.5	alternative 5' UTR
ENST00000586738.5	alternative 5' UTR
ENST00000588563.5	alternative 5' UTR
ENST00000586752.5	NP_001193915.1
ENST00000586752.5	alternative 5' UTR
ENST00000590964.5	NP_001193914.1
ENST00000588822.1	NP_001193916.1
ENST00000588822.1	alternative 5' UTR
ENST00000587459.1	not organism-supported
ENST00000359995.10	MANE_select
ENST00000392485.2	NP_003007.2
ENST00000392485.2	alternative 3' UTR
ENST00000588460.5	alternative 5' UTR
ENST00000586689.5	alternative 5' UTR
ENST00000587661.5	alternative 5' UTR
ENST00000336509.8	alternative 5' UTR
ENST00000590514.5	alternative 5' UTR
ENST00000666866.1	Assembled from SLRseq reads (SRP049776)
ENST00000664044.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670268.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000569840.7	MANE_select
ENST00000586429.5	alternative 5' UTR
ENST00000588880.5	alternative 5' UTR
ENST00000436233.9	MANE_select
ENST00000588696.5	End coincides with genomic polyA but there is a strong polyA signal at  380350 (75139921)
ENST00000587820.1	alternative 5' UTR
ENST00000591437.5	alternative 5' UTR
ENST00000588616.6	alternative 5' UTR
ENST00000427177.6	MANE_select
ENST00000449803.6	alternative 5' UTR
ENST00000431235.6	alternative 5' UTR
ENST00000431235.6	isoform 3
ENST00000588690.6	alternative 5' UTR
ENST00000591020.5	alternative 5' UTR
ENST00000586521.5	alternative 5' UTR
ENST00000588958.6	alternative 5' UTR
ENST00000586128.5	alternative 5' UTR
ENST00000591704.5	alternative 5' UTR
ENST00000591088.5	alternative 5' UTR
ENST00000590938.5	alternative 5' UTR
ENST00000592951.5	alternative 5' UTR
ENST00000586433.5	alternative 5' UTR
ENST00000585929.5	alternative 5' UTR
ENST00000593189.6	alternative 5' UTR
ENST00000427180.5	upstream ATG
ENST00000589920.5	upstream uORF
ENST00000669593.1	Assembled from SLRseq reads (SRP049776)
ENST00000660167.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660001.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664436.1	Assembled from SLRseq reads (SRP049776)
ENST00000655368.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000586779.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653013.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661481.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661624.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652977.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654934.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663796.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663004.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668146.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663779.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661175.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667474.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000659817.1	Assembled from SLRseq reads (SRP049776)
ENST00000660171.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666804.1	Assembled from SLRseq reads (SRP049776)
ENST00000649512.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000662088.1	Assembled from SLRseq reads (SRP049776)
ENST00000664715.1	Assembled from SLRseq reads (SRP049776)
ENST00000585438.1	not organism-supported
ENST00000588549.1	alternative 5' UTR
ENST00000590602.6	MANE_select
ENST00000590602.6	alternative 5' UTR
ENST00000322914.7	alternative 5' UTR
ENST00000589271.5	alternative 5' UTR
ENST00000592063.5	alternative 5' UTR
ENST00000592594.5	alternative 5' UTR
ENST00000590426.1	alternative 5' UTR
ENST00000318430.10	MANE_select
ENST00000586999.2	NMD likely if extended
ENST00000591995.1	upstream uORF
ENST00000225777.8	MANE_select
ENST00000301634.12	MANE_select
ENST00000350051.8	MANE_select
ENST00000330871.3	MANE_select
ENST00000262764.11	MANE_select
ENST00000585521.2	NMD likely if extended
ENST00000389840.7	CAGE supported TSS
ENST00000389840.7	MANE_select
ENST00000389840.7	not best-in-genome evidence
ENST00000663269.1	Assembled from SLRseq reads (SRP049776)
ENST00000647847.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666340.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648562.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665544.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649700.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665836.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664798.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000591384.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652831.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649880.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650316.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649477.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669040.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663352.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666453.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000647919.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669841.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648052.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667424.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000591455.5	confirm experimentally
ENST00000587010.5	alternative 3' UTR
ENST00000588130.5	alternative 3' UTR
ENST00000591052.5	alternative 3' UTR
ENST00000587379.1	alternative 3' UTR
ENST00000592231.5	alternative 3' UTR
ENST00000586531.5	alternative 5' UTR
ENST00000586896.2	alternative 5' UTR
ENST00000592275.5	alternative 5' UTR
ENST00000587783.5	alternative 5' UTR
ENST00000588365.1	alternative 5' UTR
ENST00000667381.1	Assembled from SLRseq reads (SRP049776)
ENST00000262768.11	MANE_select
ENST00000586713.5	upstream uORF
ENST00000322630.3	MANE_select
ENST00000262776.8	MANE_select
ENST00000392446.10	CCDS11760.1
ENST00000392446.10	MANE_select
ENST00000588075.5	alternative 5' UTR
ENST00000591811.1	alternative 5' UTR
ENST00000581579.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000579760.6	MANE_select
ENST00000339142.6	alternative 5' UTR
ENST00000392445.6	alternative 5' UTR
ENST00000579016.6	MANE_select
ENST00000648001.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648001.1	NAGNAG splice site
ENST00000328313.10	MANE_select
ENST00000328313.10	upstream ATG
ENST00000310942.9	MANE_select
ENST00000269385.9	MANE_select
ENST00000667764.1	Assembled from SLRseq reads (SRP049776)
ENST00000576963.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000269397.9	MANE_select
ENST00000269397.9	NP_003646
ENST00000655170.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000310924.7	MANE_select
ENST00000397545.9	MANE_select
ENST00000570803.5	alternative 5' UTR
ENST00000302262.8	MANE_select
ENST00000302262.8	alternative 5' UTR
ENST00000577106.5	alternative 5' UTR
ENST00000649764.2	CAGE supported TSS
ENST00000649764.2	LR annotation
ENST00000649764.2	MANE_select
ENST00000647795.1	alternative 5' UTR
ENST00000650867.1	alternative 5' UTR
ENST00000648509.2	LR annotation
ENST00000648509.2	MANE_select
ENST00000575465.6	alternative 5' UTR
ENST00000326317.11	MANE_select
ENST00000572208.5	NMD likely if extended
ENST00000577155.5	alternative 5' UTR
ENST00000361193.8	MANE_select
ENST00000574967.5	alternative 5' UTR
ENST00000411502.7	alternative 5' UTR
ENST00000546047.6	alternative 5' UTR
ENST00000571602.5	NMD likely if extended
ENST00000571564.5	NMD likely if extended
ENST00000572725.5	alternative 5' UTR
ENST00000572226.1	NMD likely if extended
ENST00000571176.1	alternative 5' UTR
ENST00000582970.5	NM_020914.4
ENST00000667202.1	Assembled from SLRseq reads (SRP049776)
ENST00000518137.6	MANE_select
ENST00000521330.6	NMD likely if extended
ENST00000306773.5	MANE_select
ENST00000306801.8	MANE_select
ENST00000649732.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000655216.1	Assembled from SLRseq reads (SRP049776)
ENST00000325167.9	MANE_select
ENST00000577061.2	non canonical U12
ENST00000658997.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659111.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655751.1	Assembled from SLRseq reads (SRP049776)
ENST00000572498.1	NAGNAG splice site
ENST00000326724.9	MANE_select
ENST00000573469.1	not organism-supported
ENST00000573441.1	NMD likely if extended
ENST00000650574.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000650574.1	CAGE supported TSS
ENST00000572339.5	CAGE supported TSS
ENST00000572339.5	alternative 5' UTR
ENST00000576053.1	CAGE supported TSS
ENST00000572798.1	NMD likely if extended
ENST00000637878.2	MANE_select
ENST00000637878.2	upstream uORF
ENST00000450824.7	MANE_select
ENST00000637944.2	MANE_select
ENST00000577158.2	non canonical TEC
ENST00000431388.3	MANE_select
ENST00000374759.8	MANE_select
ENST00000546352.1	NMD likely if extended
ENST00000332012.5	CAGE supported TSS
ENST00000665286.1	CAGE supported TSS
ENST00000648736.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000572077.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000570301.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669395.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664998.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664400.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659293.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000612902.5	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655200.1	Assembled from SLRseq reads (SRP049776)
ENST00000611501.1	CAGE supported TSS
ENST00000662306.1	Assembled from SLRseq reads (SRP049776)
ENST00000675386.2	MANE_select
ENST00000617888.1	CAGE supported TSS
ENST00000681052.1	alternative 5' UTR
ENST00000573283.7	CAGE supported TSS
ENST00000573283.7	LR annotation
ENST00000573283.7	MANE_select
ENST00000679480.1	alternative 5' UTR
ENST00000570382.2	alternative 5' UTR
ENST00000615544.5	alternative 5' UTR
ENST00000680727.1	alternative 5' UTR
ENST00000680227.1	alternative 5' UTR
ENST00000575842.5	alternative 5' UTR
ENST00000575087.5	alternative 5' UTR
ENST00000571721.6	alternative 5' UTR
ENST00000575659.6	alternative 5' UTR
ENST00000575994.6	alternative 5' UTR
ENST00000417245.7	MANE_select
ENST00000327787.13	MANE_select
ENST00000331134.11	MANE_select
ENST00000573519.5	alternative 3' UTR
ENST00000570300.1	NMD likely if extended
ENST00000331056.10	LR annotation
ENST00000331056.10	MANE_select
ENST00000331056.10	upstream ATG
ENST00000571224.5	alternative 5' UTR
ENST00000374741.4	MANE_select
ENST00000329214.13	MANE_select
ENST00000622299.5	CAGE supported TSS
ENST00000622299.5	MANE_select
ENST00000622299.5	non canonical U12
ENST00000677161.1	Ensembl_RNAseq
ENST00000677161.1	SLRseq_PASA_cluster_9935_align_id:3625552|asmbl_115717
ENST00000678387.1	PLAR_transcripts_Ens_CodingFull|3P|XLOC_029297|TCONS_00121038:9.31767
ENST00000678387.1	intropolis_filtered
ENST00000676546.1	PLAR_transcripts_EnsCodingFull|3P|XLOC_029297|TCONS_00121039:8.40305
ENST00000676546.1	Snaptron_GTEX
ENST00000676546.1	alternative 3' UTR
ENST00000676546.1	intropolis_filtered
ENST00000678096.1	PLAR_transcripts_EnsCodingFull|3P|XLOC_029297|TCONS_00121043:2.15383
ENST00000679191.1	PLAR_transcripts_EnsCodingFull|3P|XLOC_029297|TCONS_00121042:0.715744
ENST00000679170.1	intropolis_filtered
ENST00000676462.1	SLRseq_PASA_cluster_9935_align_id:3625548|asmbl_115713
ENST00000679336.1	SLRseq_PASA_cluster_9935_align_id:3625547|asmbl_115712
ENST00000678196.1	SLRseq_PASA_cluster_9935_align_id:3625554|asmbl_115719
ENST00000678196.1	Snaptron_GTEX
ENST00000678196.1	intropolis_filtered
ENST00000677243.1	SLRseq_PASA_cluster_9935_align_id:3625546|asmbl_115711
ENST00000677044.1	SLRseq_PASA_cluster_9935_align_id:3625549|asmbl_115714
ENST00000677109.1	SLRseq_align_id:3625538|asmbl_115703
ENST00000677109.1	Snaptron_GTEX
ENST00000677484.1	SLRseq_PASA_cluster_9935_align_id:3625533|asmbl_115698
ENST00000677484.1	Snaptron_GTEX
ENST00000678115.1	SLRseq_PASA_cluster_9935_align_id:3625540|asmbl_115705
ENST00000678105.1	Ensembl_RNAseq_introns
ENST00000678105.1	SLRseq_PASA_cluster_9935
ENST00000678105.1	alternative 5' UTR
ENST00000676478.1	SLRseq_PASA_cluster_9935_align_id:3625545|asmbl_115710
ENST00000677209.1	Snaptron_GTEX
ENST00000677209.1	alternative 5' UTR
ENST00000677209.1	intropolis_filtered
ENST00000676721.1	Snaptron_GTEX
ENST00000676721.1	intropolis_filtered
ENST00000329138.9	MANE_select
ENST00000679275.1	SLR-seq_HsBN_lib12
ENST00000677225.1	Ensembl_RNAseq_introns
ENST00000677225.1	SLRseq_PASA_cluster_9935_align_id:3625544|asmbl_115709
ENST00000678866.1	SLRseq_PASA_cluster_9935_align_id:3625539|asmbl_115704
ENST00000678866.1	Snaptron_GTEX
ENST00000678541.1	SLRseq_PASA_cluster_9935_align_id:3625551|asmbl_115716
ENST00000678541.1	alternative 5' UTR
ENST00000676729.1	SLRseq_PASA_cluster_9935_align_id:3625531|asmbl_115696
ENST00000676729.1	intropolis_filtered
ENST00000572392.2	Ensembl_RNAseq_introns
ENST00000572392.2	SLR-seq_HsBN_lib9
ENST00000572392.2	intropolis_filtered
ENST00000677012.1	Ensembl_RNAseq_introns
ENST00000676484.1	Snaptron_GTEX
ENST00000676484.1	intropolis_filtered
ENST00000571518.6	Snaptron_GTEX
ENST00000678846.1	SLR-seq_HsBN_lib9 & SLR-seq_HsBN_lib10
ENST00000678846.1	Snaptron_GTEX
ENST00000678846.1	intropolis_filtered
ENST00000678658.1	SLRseq_PASA_cluster_9935_align_id:3625534|asmbl_115699
ENST00000679235.1	Snaptron_GTEX
ENST00000679235.1	intropolis_filtered
ENST00000678979.1	intropolis_filtered
ENST00000676898.1	Snaptron_GTEX
ENST00000678893.1	Snaptron_GTEX
ENST00000678893.1	intropolis_filtered
ENST00000678385.1	intropolis_filtered
ENST00000678271.1	intropolis_filtered
ENST00000677805.1	intropolis_filtered
ENST00000678238.1	intropolis_filtered
ENST00000678296.1	intropolis_filtered
ENST00000677818.1	intropolis_filtered
ENST00000677129.1	Snaptron_GTEX
ENST00000677129.1	intropolis_filtered
ENST00000678313.1	SLRseq_PASA_cluster_9935_align_id:3625534|asmbl_115699
ENST00000677639.1	Ensembl_RNAseq_introns
ENST00000677639.1	intropolis_filtered
ENST00000677402.1	intropolis_filtered
ENST00000678485.1	Snaptron_GTEX
ENST00000678218.1	Snaptron_GTEX
ENST00000677463.1	Snaptron_GTEX
ENST00000677463.1	intropolis_filtered
ENST00000677872.1	Snaptron_GTEX
ENST00000677872.1	intropolis_filtered
ENST00000679168.1	Snaptron_GTEX
ENST00000679168.1	intropolis_filtered
ENST00000677472.1	Snaptron_GTEX
ENST00000677898.1	Snaptron_GTEX
ENST00000677898.1	intropolis_filtered
ENST00000677725.1	Snaptron_GTEX
ENST00000677725.1	intropolis_filtered
ENST00000676879.1	Snaptron_GTEX
ENST00000676879.1	intropolis_filtered
ENST00000678748.1	Snaptron_GTEX
ENST00000678748.1	intropolis_filtered
ENST00000678478.1	Ensembl_RNAseq
ENST00000678478.1	intropolis_filtered
ENST00000678680.1	Snaptron_GTEX
ENST00000676727.1	Snaptron_GTEX
ENST00000676963.1	Ensembl_RNAseq_introns
ENST00000677132.1	Snaptron_GTEX
ENST00000678907.1	Ensembl_RNAseq_introns
ENST00000679146.1	Snaptron_GTEX
ENST00000679146.1	intropolis_filtered
ENST00000677390.1	Snaptron_GTEX
ENST00000677390.1	intropolis_filtered
ENST00000677159.1	SLRseq_PASA_cluster_9935_align_id:3625555|asmbl_115720
ENST00000678406.1	Snaptron_GTEX
ENST00000678406.1	intropolis_filtered
ENST00000678926.1	Snaptron_GTEX
ENST00000678926.1	intropolis_filtered
ENST00000678981.1	Snaptron_GTEX
ENST00000678981.1	intropolis_filtered
ENST00000678142.1	Snaptron_GTEX
ENST00000678142.1	intropolis_filtered
ENST00000678428.1	intropolis_filtered
ENST00000678944.1	Snaptron_GTEX
ENST00000678944.1	intropolis_filtered
ENST00000678055.1	Snaptron_GTEX
ENST00000678667.1	Snaptron_GTEX
ENST00000677188.1	Snaptron_GTEX
ENST00000676704.1	Snaptron_GTEX
ENST00000677511.1	Snaptron_GTEX
ENST00000677728.1	Snaptron_GTEX
ENST00000677728.1	intropolis_filtered
ENST00000678176.1	intropolis_filtered
ENST00000677232.1	Snaptron_GTEX
ENST00000678896.1	Snaptron_GTEX
ENST00000678896.1	intropolis_filtered
ENST00000679036.1	Snaptron_GTEX
ENST00000679036.1	intropolis_filtered
ENST00000678565.1	Snaptron_GTEX
ENST00000676665.1	Snaptron_GTEX
ENST00000676665.1	intropolis_filtered
ENST00000677706.1	Snaptron_GTEX
ENST00000677706.1	intropolis_filtered
ENST00000678550.1	Snaptron_GTEX
ENST00000575078.6	Snaptron_GTEX
ENST00000575078.6	intropolis_filtered
ENST00000678607.1	Ensembl_RNAseq_introns
ENST00000678607.1	intropolis_filtered
ENST00000677466.1	Ensembl_RNAseq
ENST00000677466.1	alternative 3' UTR
ENST00000677466.1	intropolis_filtered
ENST00000679340.1	Snaptron_GTEX
ENST00000679340.1	intropolis_filtered
ENST00000573320.2	Snaptron_GTEX
ENST00000570652.2	Snaptron_GTEX
ENST00000570652.2	alternative 3' UTR
ENST00000677663.1	SLR-seq_HsBN_lib9
ENST00000677663.1	Snaptron_GTEX
ENST00000677663.1	alternative 3' UTR
ENST00000333676.8	MANE_select
ENST00000350690.10	MANE_select
ENST00000350690.10	NP_036272.2
ENST00000400723.8	MANE_select
ENST00000573428.1	alternative 5' UTR
ENST00000455127.7	MANE_select
ENST00000455127.7	alternative 3' UTR
ENST00000455127.7	alternative 5' UTR
ENST00000538396.5	alternative 5' UTR
ENST00000574190.5	alternative 3' UTR
ENST00000570507.5	NAGNAG splice site
ENST00000575061.2	alternative 3' UTR
ENST00000330261.5	MANE_select
ENST00000331483.9	MANE_select
ENST00000680105.1	alternative 3' UTR
ENST00000679366.1	alternative 3' UTR
ENST00000679455.1	alternative 3' UTR
ENST00000680259.1	alternative 3' UTR
ENST00000680909.1	alternative 3' UTR
ENST00000681933.1	alternative 3' UTR
ENST00000573778.7	alternative 3' UTR
ENST00000576380.6	alternative 3' UTR
ENST00000576541.2	alternative 3' UTR
ENST00000269321.12	MANE_select
ENST00000541078.6	alternative 5' UTR
ENST00000580685.5	alternative 5' UTR
ENST00000580033.5	alternative 3' UTR
ENST00000582309.1	alternative 5' UTR
ENST00000505490.3	MANE_select
ENST00000505490.3	NP_005773.3
ENST00000571570.5	alternative 5' UTR
ENST00000572639.5	alternative 5' UTR
ENST00000579978.5	alternative 5' UTR
ENST00000577425.5	alternative 5' UTR
ENST00000344877.10	MANE_select
ENST00000344877.10	alternative 5' UTR
ENST00000571024.6	alternative 5' UTR
ENST00000572851.6	alternative 5' UTR
ENST00000584314.5	alternative 5' UTR
ENST00000571874.6	alternative 5' UTR
ENST00000578550.5	alternative 5' UTR
ENST00000577747.5	alternative 5' UTR
ENST00000579133.5	alternative 5' UTR
ENST00000392376.7	alternative 5' UTR
ENST00000583839.1	alternative 5' UTR
ENST00000578544.1	alternative 5' UTR
ENST00000575195.2	alternative 5' UTR
ENST00000333383.8	MANE_select
ENST00000538936.7	MANE_select
ENST00000331285.7	alternative 5' UTR
ENST00000538721.6	NP_001171846.1
ENST00000573927.5	alternative 5' UTR
ENST00000572473.1	alternative 5' UTR
ENST00000328666.11	MANE_select
ENST00000357736.9	MANE_select
ENST00000392366.7	NP_116100.2
ENST00000574686.1	alternative 5' UTR
ENST00000337943.9	NP_722546
ENST00000329875.13	MANE_select
ENST00000402252.6	upstream uORF
ENST00000405481.8	alternative 5' UTR
ENST00000585215.5	alternative 5' UTR
ENST00000577624.5	NAGNAG splice site
ENST00000579698.5	alternative 5' UTR
ENST00000579366.5	alternative 5' UTR
ENST00000581271.5	alternative 5' UTR
ENST00000583564.5	alternative 5' UTR
ENST00000585244.1	alternative 5' UTR
ENST00000409745.2	MANE_select
ENST00000409678.8	MANE_select
ENST00000425009.1	alternative 5' UTR
ENST00000581484.5	upstream uORF
ENST00000306739.9	MANE_select
ENST00000392359.8	MANE_select
ENST00000306688.8	MANE_select
ENST00000583383.5	NMD likely if extended
ENST00000306897.9	MANE_select
ENST00000584341.1	alternative 5' UTR
ENST00000306869.7	MANE_select
ENST00000582900.5	NAGNAG splice site
ENST00000310496.9	MANE_select
ENST00000429557.7	alternative 5' UTR
ENST00000582327.5	NAGNAG splice site
ENST00000582327.5	alternative 5' UTR
ENST00000585084.5	NAGNAG splice site
ENST00000585084.5	alternative 5' UTR
ENST00000583961.5	NAGNAG splice site
ENST00000583961.5	alternative 5' UTR
ENST00000578552.5	NAGNAG splice site
ENST00000320548.8	NAGNAG splice site
ENST00000624957.3	NAGNAG splice site
ENST00000581578.5	alternative 5' UTR
ENST00000583885.5	NAGNAG splice site
ENST00000583641.5	NAGNAG splice site
ENST00000623691.3	NAGNAG splice site
ENST00000581418.5	NAGNAG splice site
ENST00000581418.5	alternative 5' UTR
ENST00000580141.5	NAGNAG splice site
ENST00000580141.5	alternative 3' UTR
ENST00000578392.5	NAGNAG splice site
ENST00000392358.6	NAGNAG splice site
ENST00000623761.3	NAGNAG splice site
ENST00000306796.10	MANE_select
ENST00000354321.11	alternative 5' UTR
ENST00000538833.6	NAGNAG splice site
ENST00000582529.5	alternative 5' UTR
ENST00000306749.4	MANE_select
ENST00000635197.1	alternative 5' UTR
ENST00000637525.1	alternative 5' UTR
ENST00000637026.1	alternative 5' UTR
ENST00000636968.1	alternative 5' UTR
ENST00000584689.6	alternative 5' UTR
ENST00000392341.6	alternative 5' UTR
ENST00000582743.6	MANE_select
ENST00000582743.6	alternative 5' UTR
ENST00000392339.6	alternative 5' UTR
ENST00000617373.5	alternative 5' UTR
ENST00000580189.6	alternative 5' UTR
ENST00000619321.2	alternative 5' UTR
ENST00000578904.1	NMD likely if extended
ENST00000667248.1	Assembled from SLRseq reads (SRP049776)
ENST00000660277.1	Assembled from SLRseq reads (SRP049776)
ENST00000659963.1	Assembled from SLRseq reads (SRP049776)
ENST00000663689.1	Assembled from SLRseq reads (SRP049776)
ENST00000656989.1	Assembled from SLRseq reads (SRP049776)
ENST00000671452.1	Assembled from SLRseq reads (SRP049776)
ENST00000661217.1	Assembled from SLRseq reads (SRP049776)
ENST00000312648.8	MANE_select
ENST00000269389.8	MANE_select
ENST00000581691.5	alternative 5' UTR
ENST00000582563.5	alternative 5' UTR
ENST00000582290.5	alternative 5' UTR
ENST00000581954.1	alternative 5' UTR
ENST00000333437.5	FLJ35767
ENST00000333437.5	MANE_select
ENST00000313056.10	MANE_select
ENST00000327949.15	MANE_select
ENST00000306645.10	MANE_select
ENST00000437807.6	alternative 5' UTR
ENST00000434650.6	NP_001093878
ENST00000577436.5	alternative 5' UTR
ENST00000585064.5	alternative 5' UTR
ENST00000577732.5	alternative 5' UTR
ENST00000578919.5	alternative 5' UTR
ENST00000580560.5	NAGNAG splice site
ENST00000585080.5	alternative 5' UTR
ENST00000577696.5	alternative 5' UTR
ENST00000577471.5	alternative 5' UTR
ENST00000577834.5	alternative 5' UTR
ENST00000582545.2	alternative 5' UTR
ENST00000583359.1	NMD likely if extended
ENST00000658363.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653651.1	Assembled from SLRseq reads (SRP049776)
ENST00000579198.5	alternative 5' UTR
ENST00000390006.8	NP_001033707
ENST00000580296.5	alternative 5' UTR
ENST00000584411.5	NAGNAG splice site
ENST00000584411.5	alternative 5' UTR
ENST00000309794.16	MANE_select
ENST00000577410.2	alternative 5' UTR
ENST00000335255.10	MANE_select
ENST00000392325.9	MANE_select
ENST00000571995.6	MANE_select
ENST00000269373.11	MANE_select
ENST00000300784.8	MANE_select
ENST00000355528.9	MANE_select
ENST00000576996.5	alternative 5' UTR
ENST00000576760.5	alternative 5' UTR
ENST00000572984.5	alternative 5' UTR
ENST00000574422.1	alternative 5' UTR
ENST00000269394.4	MANE_select
ENST00000320095.12	MANE_select
ENST00000570778.5	alternative 5' UTR
ENST00000654400.1	Assembled from SLRseq reads (SRP049776)
ENST00000572573.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000582707.5	NP_001032411.1
ENST00000580410.5	alternative 5' UTR
ENST00000261601.8	MANE_select
ENST00000261600.11	MANE_select
ENST00000583228.5	alternative 5' UTR
ENST00000585307.1	alternative 5' UTR
ENST00000581677.1	confirm experimentally
ENST00000400256.5	MANE_select
ENST00000400256.5	NP_569057.1
ENST00000327228.5	MANE_select
ENST00000400606.6	alternative 5' UTR
ENST00000667928.1	Assembled from SLRseq reads (SRP049776)
ENST00000664942.1	Assembled from SLRseq reads (SRP049776)
ENST00000585033.1	alternative 3' UTR
ENST00000323274.15	MANE_select
ENST00000647584.2	MANE_select
ENST00000340116.12	cDNA and EST evidence contain differing numbers of the 18 bp repeat which defines exon 1 compared with the genomic translation   ProteinID:  NP_974487.1
ENST00000314574.5	MANE_select
ENST00000314574.5	NP_005424.1
ENST00000584307.5	alternative 5' UTR
ENST00000581719.2	non canonical TEC
ENST00000667997.1	Assembled from SLRseq reads (SRP049776)
ENST00000450565.8	MANE_select
ENST00000450565.8	alternative 5' UTR
ENST00000579794.1	upstream ATG
ENST00000581602.1	alternative 5' UTR
ENST00000667797.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670380.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657618.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657423.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660947.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669242.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660475.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653775.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661931.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667416.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000657919.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661852.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661646.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667776.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660358.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000577403.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660964.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659094.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653213.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661233.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654559.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671645.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665133.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671558.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659289.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657121.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655957.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669153.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663512.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666542.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663392.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000582862.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669312.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658090.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667225.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665846.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668980.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661994.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665474.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652957.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657235.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653006.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663966.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668483.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669226.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662293.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653094.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655815.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653330.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660357.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657750.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662133.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671074.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000583163.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665135.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660136.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663660.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663472.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670283.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670529.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659989.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671104.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000639316.2	Assembled from SLRseq reads (SRP049776)
ENST00000659469.1	Assembled from RACEseq reads
ENST00000574538.2	MANE_select
ENST00000583253.1	confirm experimentally
ENST00000261597.9	MANE_select
ENST00000320876.11	MANE_select
ENST00000254528.4	MANE_select
ENST00000677752.1	MANE_select
ENST00000677752.1	alternative 5' UTR
ENST00000665001.1	Assembled from SLRseq reads (SRP049776)
ENST00000356443.9	CAGE supported TSS
ENST00000356443.9	MANE_select
ENST00000579226.5	alternative 5' UTR
ENST00000217652.8	MANE_select
ENST00000578611.5	alternative 5' UTR
ENST00000583449.1	alternative 5' UTR
ENST00000578562.6	NAGNAG splice site
ENST00000578562.6	alternative 5' UTR
ENST00000578800.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000581905.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000648965.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000648965.1	alternative 5' UTR
ENST00000237500.10	MANE_select
ENST00000581193.5	alternative 5' UTR
ENST00000400175.9	alternative 5' UTR
ENST00000584539.1	alternative 5' UTR
ENST00000578787.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664706.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665521.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664193.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000558690.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669526.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669368.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665752.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653644.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667379.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671295.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671376.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667064.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669439.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667334.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662880.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000552383.5	alternative 5' UTR
ENST00000550958.5	alternative 5' UTR
ENST00000618001.4	NP_775299.1
ENST00000549780.5	alternative 5' UTR
ENST00000549253.5	alternative 5' UTR
ENST00000407501.6	alternative 5' UTR
ENST00000546979.5	NAGNAG splice site
ENST00000546979.5	alternative 5' UTR
ENST00000343820.10	MANE_select
ENST00000343820.10	alternative 5' UTR
ENST00000577543.5	alternative 5' UTR
ENST00000551541.5	alternative 5' UTR
ENST00000345133.9	alternative 5' UTR
ENST00000330513.10	upstream ATG
ENST00000549546.5	alternative 5' UTR
ENST00000549468.5	alternative 5' UTR
ENST00000551333.1	alternative 5' UTR
ENST00000472042.1	NP_775301.1
ENST00000578664.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000315677.8	MANE_select
ENST00000534970.5	NP_001229691.1
ENST00000581699.5	NP_001229693.1
ENST00000581527.5	NP_001229690.1
ENST00000577430.1	NAGNAG splice site
ENST00000577995.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000317114.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000573355.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669270.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668204.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661913.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667062.1	Assembled from SLRseq reads (SRP049776)
ENST00000666095.1	Assembled from SLRseq reads (SRP049776)
ENST00000668905.1	Assembled from SLRseq reads (SRP049776)
ENST00000652891.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661068.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662752.1	Assembled from SLRseq reads (SRP049776)
ENST00000667972.1	Assembled from SLRseq reads (SRP049776)
ENST00000662697.1	Assembled from SLRseq reads (SRP049776)
ENST00000582054.2	Assembled from SLRseq reads (SRP049776)
ENST00000668864.1	Assembled from SLRseq reads (SRP049776)
ENST00000662868.1	Assembled from SLRseq reads (SRP049776)
ENST00000656896.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661003.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000583985.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665972.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670963.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000434239.4	MANE_select
ENST00000434239.4	NP_001138666.1
ENST00000649240.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000665272.1	Assembled from SLRseq reads (SRP049776)
ENST00000670111.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000582008.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657250.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657250.1	Assembled from SLRseq reads (SRP049776)
ENST00000654155.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654155.1	Assembled from SLRseq reads (SRP049776)
ENST00000662359.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000580684.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669574.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657129.1	Assembled from SLRseq reads (SRP049776)
ENST00000654021.1	Assembled from SLRseq reads (SRP049776)
ENST00000664934.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662415.1	Assembled from SLRseq reads (SRP049776)
ENST00000660030.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660030.1	Assembled from SLRseq reads (SRP049776)
ENST00000656810.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656810.1	Assembled from SLRseq reads (SRP049776)
ENST00000662932.1	Assembled from SLRseq reads (SRP049776)
ENST00000658607.1	Assembled from SLRseq reads (SRP049776)
ENST00000666950.1	Assembled from SLRseq reads (SRP049776)
ENST00000663393.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000580082.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653507.1	Assembled from SLRseq reads (SRP049776)
ENST00000668807.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665541.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665541.1	Assembled from SLRseq reads (SRP049776)
ENST00000660561.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662652.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668495.1	Assembled from SLRseq reads (SRP049776)
ENST00000655685.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666552.1	Assembled from SLRseq reads (SRP049776)
ENST00000665442.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665442.1	Assembled from SLRseq reads (SRP049776)
ENST00000657955.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657955.1	Assembled from SLRseq reads (SRP049776)
ENST00000670993.1	Assembled from SLRseq reads (SRP049776)
ENST00000671289.1	Assembled from SLRseq reads (SRP049776)
ENST00000661357.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658946.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669192.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000577439.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000658226.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653571.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661829.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671312.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651870.1	MANE_select
ENST00000651870.1	genebuild_only_MANE
ENST00000400143.7	alternative 5' UTR
ENST00000582388.5	alternative 5' UTR
ENST00000582388.5	upstream uORF
ENST00000582135.5	alternative 5' UTR
ENST00000578327.1	alternative 5' UTR
ENST00000341928.7	MANE_select
ENST00000540638.6	alternative 5' UTR
ENST00000580308.5	alternative 5' UTR
ENST00000584015.5	alternative 5' UTR
ENST00000580989.5	alternative 5' UTR
ENST00000581833.5	alternative 5' UTR
ENST00000585142.5	alternative 5' UTR
ENST00000582703.5	alternative 5' UTR
ENST00000580179.2	alternative 5' UTR
ENST00000654302.1	Assembled from SLRseq reads (SRP049776)
ENST00000661123.1	Assembled from SLRseq reads (SRP049776)
ENST00000656406.1	Assembled from SLRseq reads (SRP049776)
ENST00000670689.1	Assembled from SLRseq reads (SRP049776)
ENST00000670176.1	Assembled from SLRseq reads (SRP049776)
ENST00000665768.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667177.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658316.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655616.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653194.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654839.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662782.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668422.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655587.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665407.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666521.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652835.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654963.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654509.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654796.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658289.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653157.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668692.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000566533.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668925.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668423.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000580378.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661027.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653236.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667098.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671001.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653609.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656844.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664262.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666692.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659973.1	Assembled from SLRseq reads (SRP049776)
ENST00000664630.1	Assembled from SLRseq reads (SRP049776)
ENST00000659662.1	Assembled from SLRseq reads (SRP049776)
ENST00000659442.1	Assembled from SLRseq reads (SRP049776)
ENST00000317931.12	MANE_select
ENST00000583054.5	alternative 5' UTR
ENST00000583809.5	NAGNAG splice site
ENST00000623868.1	confirm experimentally
ENST00000584361.1	NP_001230446.1
ENST00000623844.1	confirm experimentally
ENST00000383472.9	MANE_select
ENST00000383472.9	confirm experimentally
ENST00000532723.5	alternative 5' UTR
ENST00000581099.5	alternative 5' UTR
ENST00000419673.6	NP_001010000.1
ENST00000532996.5	upstream ATG
ENST00000656732.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000578497.5	NAGNAG splice site
ENST00000389658.4	MANE_select
ENST00000389658.4	NP_005550.2
ENST00000580170.6	MANE_select
ENST00000577468.2	NMD likely if extended
ENST00000668117.1	Assembled from RACEseq reads
ENST00000660095.1	Assembled from SLRseq reads (SRP049776)
ENST00000523122.1	alternative 5' UTR
ENST00000518815.1	upstream ATG
ENST00000667345.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668687.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000318388.11	MANE_select
ENST00000583375.5	NMD likely if extended
ENST00000579126.5	NMD likely if extended
ENST00000578850.1	NMD likely if extended
ENST00000585234.5	alternative 5' UTR
ENST00000262126.9	MANE_select
ENST00000577992.1	alternative 5' UTR
ENST00000577992.1	upstream ATG
ENST00000540578.6	NMD likely if extended
ENST00000581758.1	NMD likely if extended
ENST00000584509.2	Assembled from SLRseq reads (SRP049776)
ENST00000262120.10	MANE_select
ENST00000668094.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000585015.6	alternative 5' UTR
ENST00000383432.8	MANE_select
ENST00000383432.8	alternative 5' UTR
ENST00000458039.3	alternative 5' UTR
ENST00000577221.1	alternative 5' UTR
ENST00000400556.8	FLJ21856, FLJ23411
ENST00000400556.8	MANE_select
ENST00000584074.5	alternative 5' UTR
ENST00000581250.5	alternative 5' UTR
ENST00000580745.5	alternative 5' UTR
ENST00000582240.5	alternative 5' UTR
ENST00000581835.1	alternative 5' UTR
ENST00000649128.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000578921.6	MANE_select
ENST00000649534.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000584255.1	alternative 5' UTR
ENST00000357775.6	MANE_select
ENST00000426718.3	NMD likely if extended
ENST00000400000.7	MANE_select
ENST00000669473.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669383.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666410.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665436.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654161.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653772.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671418.1	Assembled from SLRseq reads (SRP049776)
ENST00000355285.10	MANE_select
ENST00000322897.11	MANE_select
ENST00000302079.10	confirm experimentally
ENST00000674853.1	MANE_select
ENST00000503781.7	NM_022068.2
ENST00000580640.5	confirm experimentally
ENST00000659512.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668070.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656361.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669406.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000586947.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661687.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665603.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668120.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660965.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659316.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655334.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658156.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670553.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654376.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655487.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654285.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657252.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661251.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656057.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665083.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655180.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664285.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665383.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658793.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666190.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664813.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661916.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660761.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666911.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669156.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666178.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664427.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663721.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665636.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663415.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000588001.2	not best-in-genome evidence
ENST00000547442.5	not best-in-genome evidence
ENST00000334049.11	MANE_select
ENST00000334049.11	NP_892023
ENST00000535121.5	alternative 5' UTR
ENST00000269162.9	alternative 5' UTR
ENST00000666417.1	Assembled from SLRseq reads (SRP049776)
ENST00000526991.3	MANE_select
ENST00000609238.1	CAGE supported TSS
ENST00000588072.6	MANE_select
ENST00000309976.13	alternative 5' UTR
ENST00000592977.5	alternative 5' UTR
ENST00000592331.5	NMD likely if extended
ENST00000588186.5	alternative 5' UTR
ENST00000588191.5	alternative 5' UTR
ENST00000589267.5	alternative 5' UTR
ENST00000590501.5	alternative 5' UTR
ENST00000588103.5	alternative 5' UTR
ENST00000589859.1	alternative 5' UTR
ENST00000586844.5	alternative 5' UTR
ENST00000589238.5	alternative 5' UTR
ENST00000269159.8	MANE_select
ENST00000391405.2	Possible pseudogene-previous annotator
ENST00000391405.2	gdr reviewed this today (27/04/2012) and found this to had been annotated as a novel protein (152 aa), but without any attached evidence; gdr now annotates this as kinesin family member 1C (KIF1C) pseudogene, adding Sw:O43896.3 as an evidence, and a pseudo polyA signal.  -gdr 27/04/2012
ENST00000587848.3	MANE_select
ENST00000625003.1	confirm experimentally
ENST00000320477.10	MANE_select
ENST00000590693.5	alternative 5' UTR
ENST00000317702.10	MANE_select
ENST00000269143.8	MANE_select
ENST00000590956.5	alternative 5' UTR
ENST00000440960.6	MANE_select
ENST00000440960.6	genebuild_only_MANE
ENST00000589952.5	alternative 5' UTR
ENST00000453447.6	NP_001122099
ENST00000449797.5	alternative 5' UTR
ENST00000462226.1	alternative 5' UTR
ENST00000317615.11	MANE_select
ENST00000262127.7	MANE_select
ENST00000657716.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652793.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000589930.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000309660.10	MANE_select
ENST00000643900.1	CAGE supported TSS
ENST00000644814.1	CAGE supported TSS
ENST00000399892.7	MANE_select
ENST00000506447.5	MANE_select
ENST00000506447.5	NP_115518.3
ENST00000587905.6	alternative 5' UTR
ENST00000676891.1	CAGE supported TSS
ENST00000679091.1	CAGE supported TSS
ENST00000676672.1	CAGE supported TSS
ENST00000586222.2	CAGE supported TSS
ENST00000586222.2	alternative 5' UTR
ENST00000678309.1	CAGE supported TSS
ENST00000593236.1	alternative 5' UTR
ENST00000587757.5	NP_001003674
ENST00000623680.1	confirm experimentally
ENST00000654841.1	Assembled from SLRseq reads (SRP049776)
ENST00000623585.1	confirm experimentally
ENST00000624889.1	confirm experimentally
ENST00000651643.1	MANE_select
ENST00000651643.1	genebuild_only_MANE
ENST00000592976.5	alternative 5' UTR
ENST00000591269.1	alternative 5' UTR
ENST00000624611.1	confirm experimentally
ENST00000543302.6	alternative 5' UTR
ENST00000383314.7	MANE_select
ENST00000591746.1	alternative 5' UTR
ENST00000589866.5	alternative 5' UTR
ENST00000589410.2	MANE_select
ENST00000589410.2	alternative 5' UTR
ENST00000327606.4	MANE_select
ENST00000399821.2	alternative 5' UTR
ENST00000623071.1	confirm experimentally
ENST00000590202.3	MANE_select
ENST00000624133.1	confirm experimentally
ENST00000671044.1	Assembled from SLRseq reads (SRP049776)
ENST00000358970.9	not best-in-genome evidence
ENST00000647999.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000623604.2	not best-in-genome evidence
ENST00000652892.1	Assembled from SLRseq reads (SRP049776)
ENST00000657254.1	Assembled from SLRseq reads (SRP049776)
ENST00000666083.1	Assembled from SLRseq reads (SRP049776)
ENST00000667754.1	Assembled from RACEseq reads
ENST00000399799.3	MANE_select
ENST00000269218.10	confirm experimentally
ENST00000580732.6	upstream uORF
ENST00000269214.10	MANE_select
ENST00000300413.10	MANE_select
ENST00000582475.1	upstream ATG
ENST00000289119.7	MANE_select
ENST00000261537.7	MANE_select
ENST00000581072.6	Assembled from SLRseq reads (SRP049776)
ENST00000577659.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664484.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000269216.10	MANE_select
ENST00000581694.1	alternative 5' UTR
ENST00000391403.4	MANE_select
ENST00000583700.5	alternative 5' UTR
ENST00000579124.5	alternative 5' UTR
ENST00000577588.5	alternative 5' UTR
ENST00000582354.5	alternative 5' UTR
ENST00000581819.5	alternative 5' UTR
ENST00000327155.10	MANE_select
ENST00000399722.6	alternative 5' UTR
ENST00000399721.6	alternative 5' UTR
ENST00000580153.5	alternative 5' UTR
ENST00000383233.8	MANE_select
ENST00000339486.8	MANE_select
ENST00000269221.8	MANE_select
ENST00000269221.8	non canonical conserved
ENST00000589215.5	non canonical conserved
ENST00000590868.5	non canonical conserved
ENST00000269228.10	MANE_select
ENST00000540608.5	NMD likely if extended
ENST00000592179.6	MANE_select
ENST00000313654.14	MANE_select
ENST00000399516.7	NP_001121189.1
ENST00000649721.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000587184.5	NP_001121190.1
ENST00000664669.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000584250.1	NP_001230354.1
ENST00000317571.8	MANE_select
ENST00000578150.1	NMD likely if extended
ENST00000399481.6	NMD exception
ENST00000463087.5	NAGNAG splice site
ENST00000463087.5	NMD exception
ENST00000463087.5	alternative 3' UTR
ENST00000579956.5	alternative 3' UTR
ENST00000584752.5	alternative 3' UTR
ENST00000585037.5	NAGNAG splice site
ENST00000585037.5	alternative 5' UTR
ENST00000399496.8	MANE_select
ENST00000486759.6	alternative 3' UTR
ENST00000577705.1	alternative 5' UTR
ENST00000621648.4	NMD exception
ENST00000399499.5	alternative 5' UTR
ENST00000579102.1	alternative 5' UTR
ENST00000582229.1	NMD exception
ENST00000582229.1	alternative 3' UTR
ENST00000319481.8	MANE_select
ENST00000357041.8	NP_001229437.1
ENST00000579764.5	NMD likely if extended
ENST00000582350.5	NMD likely if extended
ENST00000582618.1	NMD likely if extended
ENST00000648078.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000284202.9	MANE_select
ENST00000256906.5	MANE_select
ENST00000656050.1	Assembled from SLRseq reads (SRP049776)
ENST00000657131.1	Assembled from SLRseq reads (SRP049776)
ENST00000581648.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000668994.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662616.1	Assembled from SLRseq reads (SRP049776)
ENST00000664008.1	Assembled from SLRseq reads (SRP049776)
ENST00000669666.1	Assembled from SLRseq reads (SRP049776)
ENST00000665252.1	Assembled from SLRseq reads (SRP049776)
ENST00000667449.1	Assembled from SLRseq reads (SRP049776)
ENST00000664770.1	Assembled from SLRseq reads (SRP049776)
ENST00000663865.1	Assembled from SLRseq reads (SRP049776)
ENST00000663563.1	Assembled from SLRseq reads (SRP049776)
ENST00000648293.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000663756.1	Assembled from SLRseq reads (SRP049776)
ENST00000669467.1	Assembled from SLRseq reads (SRP049776)
ENST00000661107.1	Assembled from SLRseq reads (SRP049776)
ENST00000659746.1	Assembled from SLRseq reads (SRP049776)
ENST00000652945.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653857.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000578490.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661125.1	Assembled from SLRseq reads (SRP049776)
ENST00000577354.6	Assembled from SLRseq reads (SRP049776)
ENST00000669186.1	Assembled from SLRseq reads (SRP049776)
ENST00000669129.1	Assembled from SLRseq reads (SRP049776)
ENST00000671003.1	Assembled from SLRseq reads (SRP049776)
ENST00000658595.1	Assembled from SLRseq reads (SRP049776)
ENST00000654065.1	Assembled from SLRseq reads (SRP049776)
ENST00000658371.1	Assembled from SLRseq reads (SRP049776)
ENST00000657521.1	Assembled from SLRseq reads (SRP049776)
ENST00000657601.1	Assembled from SLRseq reads (SRP049776)
ENST00000670277.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670369.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665916.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000361524.8	MANE_select
ENST00000361524.8	overlapping uORF
ENST00000584787.5	upstream uORF
ENST00000538137.6	alternative 5' UTR
ENST00000538137.6	upstream uORF
ENST00000577801.5	alternative 5' UTR
ENST00000580488.1	alternative 5' UTR
ENST00000580488.1	upstream uORF
ENST00000577461.1	alternative 5' UTR
ENST00000649176.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000415083.7	MANE_select
ENST00000579061.5	alternative 5' UTR
ENST00000584083.5	alternative 5' UTR
ENST00000581021.5	alternative 5' UTR
ENST00000415576.7	MANE_select
ENST00000269142.10	MANE_select
ENST00000660990.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653430.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000580059.7	MANE_select
ENST00000580059.7	alternative 5' UTR
ENST00000408011.7	alternative 5' UTR
ENST00000580638.5	alternative 5' UTR
ENST00000657709.1	Assembled from SLRseq reads (SRP049776)
ENST00000579964.6	Assembled from SLRseq reads (SRP049776)
ENST00000668155.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670815.1	Assembled from SLRseq reads (SRP049776)
ENST00000658581.1	Assembled from SLRseq reads (SRP049776)
ENST00000664268.1	Assembled from SLRseq reads (SRP049776)
ENST00000656601.1	Assembled from SLRseq reads (SRP049776)
ENST00000664897.1	Assembled from SLRseq reads (SRP049776)
ENST00000669364.1	Assembled from SLRseq reads (SRP049776)
ENST00000661645.1	Assembled from SLRseq reads (SRP049776)
ENST00000666726.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656494.1	Assembled from SLRseq reads (SRP049776)
ENST00000659210.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655572.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000584560.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000383168.9	MANE_select
ENST00000440832.7	alternative 5' UTR
ENST00000440832.7	upstream ATG
ENST00000618847.5	MANE_select
ENST00000581714.5	alternative 5' UTR
ENST00000582893.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000580699.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659566.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662375.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660338.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668820.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000663298.1	Assembled from SLRseq reads (SRP049776)
ENST00000269141.8	MANE_select
ENST00000649159.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000666254.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657542.1	Assembled from SLRseq reads (SRP049776)
ENST00000360428.9	MANE_select
ENST00000360428.9	non canonical genome sequence error
ENST00000251081.8	LR annotation
ENST00000280904.11	LR annotation
ENST00000280904.11	MANE_select
ENST00000648081.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648081.1	upstream uORF
ENST00000654403.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000257198.6	MANE_select
ENST00000582307.1	confirm experimentally
ENST00000257192.5	MANE_select
ENST00000308128.9	MANE_select
ENST00000257189.5	MANE_select
ENST00000261590.13	MANE_select
ENST00000657343.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664179.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000610404.5	upstream ATG
ENST00000649620.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000649620.1	alternative 5' UTR
ENST00000649620.1	upstream ATG
ENST00000237014.8	MANE_select
ENST00000565978.1	confirm experimentally
ENST00000269205.7	MANE_select
ENST00000283351.10	MANE_select
ENST00000283351.10	NAGNAG splice site
ENST00000217740.4	MANE_select
ENST00000261593.8	MANE_select
ENST00000578107.5	alternative 5' UTR
ENST00000269209.7	MANE_select
ENST00000581447.1	NAGNAG splice site
ENST00000269202.11	MANE_select
ENST00000269202.11	NAGNAG splice site
ENST00000654761.1	Assembled from SLRseq reads (SRP049776)
ENST00000670534.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656657.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000359358.9	MANE_select
ENST00000426194.1	not organism-supported
ENST00000577766.5	alternative 5' UTR
ENST00000591558.1	poor quality sequence at 3' end
ENST00000269197.12	MANE_select
ENST00000592288.6	upstream ATG
ENST00000586948.1	NMD likely if extended
ENST00000261592.10	MANE_select
ENST00000589544.5	confirm experimentally
ENST00000679936.1	alternative 5' UTR
ENST00000680366.1	alternative 5' UTR
ENST00000591816.6	alternative 5' UTR
ENST00000680346.1	alternative 5' UTR
ENST00000680767.1	CAGE supported TSS
ENST00000588949.6	alternative 5' UTR
ENST00000399113.7	confirm experimentally
ENST00000613388.2	Assembled from RACEseq reads
ENST00000300249.10	MANE_select
ENST00000330501.12	MANE_select
ENST00000601719.1	alternative 5' UTR
ENST00000591206.5	alternative 5' UTR
ENST00000333206.10	MANE_select
ENST00000420878.7	alternative 5' UTR
ENST00000592598.1	alternative 5' UTR
ENST00000592211.1	alternative 5' UTR
ENST00000618230.1	CAGE supported TSS
ENST00000261332.11	MANE_select
ENST00000399061.3	alternative 5' UTR
ENST00000590140.1	alternative 5' UTR
ENST00000589539.1	alternative 5' UTR
ENST00000593130.1	alternative 5' UTR
ENST00000589332.7	MANE_select
ENST00000585522.1	alternative 5' UTR
ENST00000587422.1	alternative 5' UTR
ENST00000334598.12	MANE_select
ENST00000591924.5	alternative 5' UTR
ENST00000269194.10	alternative 5' UTR
ENST00000592875.6	MANE_select
ENST00000587873.5	alternative 5' UTR
ENST00000587563.5	alternative 3' UTR
ENST00000585879.1	alternative 3' UTR
ENST00000399022.9	FLJ10656
ENST00000399022.9	MANE_select
ENST00000357384.8	alternative 3' UTR
ENST00000269187.10	MANE_select
ENST00000590986.5	alternative 5' UTR
ENST00000358232.11	MANE_select
ENST00000261326.6	MANE_select
ENST00000667304.1	Assembled from SLRseq reads (SRP049776)
ENST00000334295.9	MANE_select
ENST00000280020.10	MANE_select
ENST00000591619.5	NMD exception
ENST00000591911.1	alternative 5' UTR
ENST00000420428.7	MANE_select
ENST00000420428.7	genebuild_only_MANE
ENST00000361795.9	non canonical conserved
ENST00000361795.9	non-canonical splice site conserved in mouse and maqacue
ENST00000603232.6	NP_001020258.1
ENST00000603232.6	non canonical conserved
ENST00000587911.5	NMD exception
ENST00000649194.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000661428.1	Assembled from SLRseq reads (SRP049776)
ENST00000657504.1	Assembled from SLRseq reads (SRP049776)
ENST00000663576.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669399.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668052.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671441.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666361.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667816.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669590.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668737.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665749.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662708.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663592.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000591629.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670992.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666611.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667009.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667500.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666148.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665844.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658829.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660099.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670388.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653594.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655721.1	Assembled from SLRseq reads (SRP049776)
ENST00000665416.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000655349.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000664913.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654837.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663128.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655720.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667701.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668391.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663244.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652839.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670943.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667895.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654975.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666091.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670383.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652860.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664919.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000660405.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667722.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653742.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654966.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666181.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658177.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670121.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669520.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663334.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000656839.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000658956.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000668006.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654956.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658494.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657401.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661169.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670258.1	Assembled from RACEseq reads
ENST00000663227.1	Assembled from SLRseq reads (SRP049776)
ENST00000636467.2	Assembled from SLRseq reads (SRP049776)
ENST00000668049.1	Assembled from SLRseq reads (SRP049776)
ENST00000659647.1	Assembled from SLRseq reads (SRP049776)
ENST00000660142.1	Assembled from SLRseq reads (SRP049776)
ENST00000667705.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670702.1	Assembled from SLRseq reads (SRP049776)
ENST00000262039.9	MANE_select
ENST00000665793.1	Assembled from SLRseq reads (SRP049776)
ENST00000659948.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000586990.6	Assembled from SLRseq reads (SRP049776)
ENST00000658915.1	Assembled from RACEseq reads
ENST00000659778.1	Assembled from RACEseq reads
ENST00000326695.10	MANE_select
ENST00000650392.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000656773.1	Assembled from SLRseq reads (SRP049776)
ENST00000660614.1	Assembled from SLRseq reads (SRP049776)
ENST00000255224.8	MANE_select
ENST00000649259.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000664723.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668470.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667772.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660684.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670858.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667908.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667873.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659766.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660866.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656528.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661590.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662019.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670168.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669871.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659414.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664337.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000587877.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654586.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666277.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656465.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665202.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663869.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653780.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659598.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664969.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663353.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657927.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666688.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653402.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669315.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000677068.1	alternative 5' UTR
ENST00000649279.2	CAGE supported TSS
ENST00000649279.2	LR annotation
ENST00000649279.2	MANE_select
ENST00000677077.1	alternative 5' UTR
ENST00000660208.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658735.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662399.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000589845.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655755.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649653.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000671581.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000255226.11	MANE_select
ENST00000666629.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650598.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000658918.1	Assembled from RACEseq reads
ENST00000587601.5	alternative 5' UTR
ENST00000321925.9	CAGE supported TSS
ENST00000321925.9	LR annotation
ENST00000321925.9	MANE_select
ENST00000586951.6	alternative 5' UTR
ENST00000535474.5	NP_001295208
ENST00000402943.6	NP_001295207
ENST00000586056.5	alternative 5' UTR
ENST00000436407.7	alternative 5' UTR
ENST00000590246.6	alternative 5' UTR
ENST00000586142.5	alternative 5' UTR
ENST00000389474.8	MANE_select
ENST00000282041.11	CAGE supported TSS
ENST00000282041.11	LR annotation
ENST00000282041.11	MANE_select
ENST00000409746.5	MANE_select
ENST00000398752.11	MANE_select
ENST00000282058.11	MANE_select
ENST00000587591.5	alternative 5' UTR
ENST00000615052.5	MANE_select
ENST00000269439.12	MANE_select
ENST00000650266.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000300591.11	CAGE supported TSS
ENST00000582408.6	upstream ATG
ENST00000642948.1	CAGE supported TSS
ENST00000642948.1	MANE_select
ENST00000452425.2	alternative 5' UTR
ENST00000452425.2	upstream ATG
ENST00000315087.12	MANE_select
ENST00000656102.1	Assembled from SLRseq reads (SRP049776)
ENST00000662459.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663845.1	Assembled from SLRseq reads (SRP049776)
ENST00000661793.1	Assembled from SLRseq reads (SRP049776)
ENST00000669973.1	Assembled from SLRseq reads (SRP049776)
ENST00000585916.6	MANE_select
ENST00000585469.5	upstream uORF
ENST00000245121.9	upstream uORF
ENST00000356157.12	confirm experimentally
ENST00000676383.1	not best-in-genome evidence
ENST00000300605.11	MANE_select
ENST00000300605.11	alternative 5' UTR
ENST00000590481.5	alternative 5' UTR
ENST00000588940.5	alternative 5' UTR
ENST00000587388.5	alternative 5' UTR
ENST00000591671.1	NMD likely if extended
ENST00000602459.6	alternative 3' UTR
ENST00000256433.6	MANE_select
ENST00000425639.3	MANE_select
ENST00000425639.3	confirm experimentally
ENST00000425639.3	snoRNA host
ENST00000400404.1	snoRNA host
ENST00000658369.1	Assembled from SLRseq reads (SRP049776)
ENST00000262160.11	MANE_select
ENST00000586040.5	confirm experimentally
ENST00000587269.5	alternative 5' UTR
ENST00000586514.5	alternative 5' UTR
ENST00000587421.5	alternative 5' UTR
ENST00000589877.5	alternative 5' UTR
ENST00000585978.1	alternative 5' UTR
ENST00000599498.1	non canonical other
ENST00000590800.6	MANE_select
ENST00000535628.6	alternative 5' UTR
ENST00000588982.5	alternative 5' UTR
ENST00000590437.5	alternative 5' UTR
ENST00000585404.5	alternative 5' UTR
ENST00000589619.5	alternative 5' UTR
ENST00000586743.5	alternative 5' UTR
ENST00000589077.5	alternative 5' UTR
ENST00000592656.5	alternative 5' UTR
ENST00000589194.5	alternative 5' UTR
ENST00000591279.5	alternative 5' UTR
ENST00000590855.5	alternative 5' UTR
ENST00000587107.5	alternative 5' UTR
ENST00000588970.5	alternative 5' UTR
ENST00000586525.5	alternative 5' UTR
ENST00000592387.5	alternative 5' UTR
ENST00000586047.5	alternative 5' UTR
ENST00000591405.5	alternative 5' UTR
ENST00000590178.5	alternative 5' UTR
ENST00000588149.5	alternative 5' UTR
ENST00000588566.5	alternative 5' UTR
ENST00000591526.5	alternative 5' UTR
ENST00000590374.5	alternative 5' UTR
ENST00000589170.5	alternative 5' UTR
ENST00000588028.1	alternative 5' UTR
ENST00000652829.1	Assembled from SLRseq reads (SRP049776)
ENST00000256413.8	MANE_select
ENST00000591387.5	alternative 5' UTR
ENST00000587752.5	alternative 5' UTR
ENST00000588345.1	alternative 5' UTR
ENST00000262158.7	overlapping uORF
ENST00000589634.1	NAGNAG splice site
ENST00000586093.1	alternative 5' UTR
ENST00000586093.1	upstream ATG
ENST00000675505.1	CAGE supported TSS
ENST00000675505.1	MANE_select
ENST00000583225.5	NAGNAG splice site
ENST00000583280.5	NAGNAG splice site
ENST00000583353.1	alternative 5' UTR
ENST00000577481.5	NMD likely if extended
ENST00000584977.5	NMD likely if extended
ENST00000581409.5	NMD likely if extended
ENST00000582095.5	NMD likely if extended
ENST00000667426.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000318240.8	MANE_select
ENST00000318240.8	alternative 5' UTR
ENST00000582392.2	alternative 5' UTR
ENST00000584895.5	NP_001186284.1
ENST00000618619.4	alternative 5' UTR
ENST00000618613.5	alternative 5' UTR
ENST00000579408.5	alternative 5' UTR
ENST00000579248.5	alternative 5' UTR
ENST00000583637.5	alternative 5' UTR
ENST00000578532.5	alternative 5' UTR
ENST00000617346.4	alternative 5' UTR
ENST00000583036.5	alternative 5' UTR
ENST00000615760.4	alternative 5' UTR
ENST00000580387.5	alternative 5' UTR
ENST00000615479.4	alternative 5' UTR
ENST00000578528.1	alternative 5' UTR
ENST00000261292.9	MANE_select
ENST00000623277.1	confirm experimentally
ENST00000285093.15	MANE_select
ENST00000586485.5	alternative 5' UTR
ENST00000585948.5	alternative 5' UTR
ENST00000285039.12	MANE_select
ENST00000398545.5	MANE_select
ENST00000382948.9	alternative 3' UTR
ENST00000457839.6	alternative 3' UTR
ENST00000457839.6	alternative 5' UTR
ENST00000285106.11	MANE_select
ENST00000586837.1	alternative 5' UTR
ENST00000586837.1	upstream ATG
ENST00000587396.1	alternative 5' UTR
ENST00000587396.1	overlapping uORF
ENST00000398452.6	alternative 5' UTR
ENST00000285116.8	MANE_select
ENST00000400384.7	MANE_select
ENST00000657182.1	Assembled from SLRseq reads (SRP049776)
ENST00000398439.8	MANE_select
ENST00000398439.8	alternative 5' UTR
ENST00000428869.6	alternative 5' UTR
ENST00000436348.6	NP_001120648.1
ENST00000592966.5	alternative 5' UTR
ENST00000321341.11	MANE_select
ENST00000639688.1	alternative 3' UTR
ENST00000639612.1	alternative 3' UTR
ENST00000585680.2	alternative 3' UTR
ENST00000269466.8	MANE_select
ENST00000588256.1	NMD likely if extended
ENST00000588860.5	alternative 5' UTR
ENST00000589076.5	alternative 5' UTR
ENST00000590061.1	alternative 5' UTR
ENST00000342988.8	MANE_select
ENST00000342988.8	alternative 5' UTR
ENST00000589941.1	alternative 5' UTR
ENST00000406189.4	MANE_select
ENST00000635503.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000662191.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666962.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666929.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658078.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665482.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000435144.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655280.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662744.1	Assembled from SLRseq reads (SRP049776)
ENST00000659439.1	Assembled from SLRseq reads (SRP049776)
ENST00000665420.1	Assembled from SLRseq reads (SRP049776)
ENST00000659333.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661773.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660545.1	Assembled from SLRseq reads (SRP049776)
ENST00000656225.1	Assembled from RACEseq reads
ENST00000650572.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000442544.7	MANE_select
ENST00000580024.1	NMD likely if extended
ENST00000577224.1	confirm experimentally
ENST00000671412.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650275.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000652786.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667801.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662607.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655115.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000579506.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669727.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000581198.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663332.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654465.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671590.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667052.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658566.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655896.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665439.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000256429.8	MANE_select
ENST00000621167.1	CAGE supported TSS
ENST00000579534.6	MANE_select
ENST00000580880.1	alternative 5' UTR
ENST00000620105.5	MANE_select
ENST00000620105.5	genebuild_only_MANE
ENST00000648616.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648945.2	MANE_select
ENST00000648945.2	upstream ATG
ENST00000586570.5	alternative 5' UTR
ENST00000262094.10	MANE_select
ENST00000586594.1	NMD likely if extended
ENST00000591504.6	MANE_select
ENST00000592040.5	alternative 3' UTR
ENST00000337363.8	alternative 5' UTR
ENST00000592405.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657832.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000354452.8	MANE_select
ENST00000643689.1	CAGE supported TSS
ENST00000643689.1	NP_001230162
ENST00000356073.8	upstream uORF
ENST00000637169.2	CAGE supported TSS
ENST00000636822.2	CAGE supported TSS
ENST00000638154.3	CAGE supported TSS
ENST00000570287.6	CAGE supported TSS
ENST00000570287.6	NP_001230164.1
ENST00000564999.5	alternative 5' UTR
ENST00000629387.2	alternative 5' UTR
ENST00000568673.5	CAGE supported TSS
ENST00000568673.5	alternative 5' UTR
ENST00000457482.7	CAGE supported TSS
ENST00000457482.7	NP_001230163.1
ENST00000543082.5	CAGE supported TSS
ENST00000543082.5	NP_001230160.1
ENST00000540999.5	CAGE supported TSS
ENST00000537578.5	NP_001230156.1
ENST00000568740.5	NAGNAG splice site
ENST00000626631.1	alternative 3' UTR
ENST00000537856.7	CAGE supported TSS
ENST00000537856.7	NAGNAG splice site
ENST00000537856.7	alternative 5' UTR
ENST00000544241.6	CAGE supported TSS
ENST00000544241.6	NAGNAG splice site
ENST00000544241.6	NP_001230161.1
ENST00000675707.1	alternative 5' UTR
ENST00000561992.5	CAGE supported TSS
ENST00000561992.5	upstream uORF
ENST00000561831.7	CAGE supported TSS
ENST00000561831.7	NP_001230165.1
ENST00000564228.5	CAGE supported TSS
ENST00000564228.5	NAGNAG splice site
ENST00000566286.5	NAGNAG splice site
ENST00000565018.6	confirm experimentally
ENST00000564403.6	NP_001230157.1
ENST00000564403.6	upstream uORF
ENST00000398339.5	NP_001230155.2
ENST00000570177.6	CAGE supported TSS
ENST00000570177.6	NP_001230162.1
ENST00000570177.6	alternative 5' UTR
ENST00000570177.6	overlapping uORF
ENST00000626584.2	CAGE supported TSS
ENST00000626584.2	confirm experimentally
ENST00000630720.3	CAGE supported TSS
ENST00000630720.3	NAGNAG splice site
ENST00000563760.5	NMD likely if extended
ENST00000628689.2	CAGE supported TSS
ENST00000629343.2	CAGE supported TSS
ENST00000629343.2	alternative 5' UTR
ENST00000628636.2	CAGE supported TSS
ENST00000628636.2	alternative 5' UTR
ENST00000627136.2	CAGE supported TSS
ENST00000627136.2	NMD likely if extended
ENST00000628078.2	CAGE supported TSS
ENST00000628078.2	alternative 5' UTR
ENST00000562030.3	CAGE supported TSS
ENST00000562030.3	alternative 5' UTR
ENST00000566514.5	CAGE supported TSS
ENST00000630828.2	CAGE supported TSS
ENST00000562607.5	CAGE supported TSS
ENST00000562607.5	NAGNAG splice site
ENST00000562607.5	alternative 5' UTR
ENST00000569012.5	CAGE supported TSS
ENST00000569012.5	alternative 5' UTR
ENST00000630268.2	CAGE supported TSS
ENST00000630268.2	NAGNAG splice site
ENST00000630268.2	alternative 5' UTR
ENST00000630319.2	CAGE supported TSS
ENST00000625925.2	CAGE supported TSS
ENST00000625925.2	NAGNAG splice site
ENST00000625925.2	alternative 5' UTR
ENST00000566777.5	CAGE supported TSS
ENST00000566777.5	alternative 5' UTR
ENST00000630712.2	CAGE supported TSS
ENST00000630712.2	alternative 5' UTR
ENST00000568186.5	CAGE supported TSS
ENST00000568186.5	NAGNAG splice site
ENST00000568186.5	alternative 5' UTR
ENST00000562638.5	CAGE supported TSS
ENST00000562638.5	alternative 5' UTR
ENST00000565908.6	alternative 5' UTR
ENST00000627685.2	CAGE supported TSS
ENST00000627685.2	alternative 5' UTR
ENST00000626595.2	alternative 5' UTR
ENST00000637068.1	CAGE supported TSS
ENST00000626425.2	CAGE supported TSS
ENST00000626425.2	NAGNAG splice site
ENST00000626425.2	alternative 5' UTR
ENST00000566376.3	NAGNAG splice site
ENST00000590810.5	CAGE supported TSS
ENST00000563824.5	CAGE supported TSS
ENST00000563824.5	alternative 5' UTR
ENST00000568147.5	CAGE supported TSS
ENST00000563888.6	CAGE supported TSS
ENST00000563888.6	NAGNAG splice site
ENST00000563888.6	alternative 5' UTR
ENST00000564343.5	alternative 5' UTR
ENST00000627784.2	NAGNAG splice site
ENST00000562543.5	alternative 5' UTR
ENST00000562847.5	CAGE supported TSS
ENST00000569357.4	NAGNAG splice site
ENST00000627320.2	alternative 3' UTR
ENST00000628391.1	NMD likely if extended
ENST00000654829.1	Assembled from SLRseq reads (SRP049776)
ENST00000662428.1	Assembled from SLRseq reads (SRP049776)
ENST00000656675.1	Assembled from SLRseq reads (SRP049776)
ENST00000657320.1	Assembled from SLRseq reads (SRP049776)
ENST00000663960.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657903.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000585985.1	confirm experimentally
ENST00000658965.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654280.1	Assembled from SLRseq reads (SRP049776)
ENST00000655696.1	Assembled from SLRseq reads (SRP049776)
ENST00000666716.1	Assembled from SLRseq reads (SRP049776)
ENST00000650203.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000666339.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668277.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670330.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669280.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655080.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670007.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654881.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658765.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665184.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656745.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652801.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667821.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655602.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652886.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654844.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667595.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000588139.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668250.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668250.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000657263.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662839.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654274.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669356.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660206.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666707.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665718.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660045.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662462.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670965.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661664.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670523.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659011.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663754.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663271.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664682.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668293.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660935.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657626.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663160.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663675.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000589983.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665510.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659119.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662429.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662735.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655648.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653652.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662269.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671593.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657412.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671420.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661430.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654820.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660365.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664842.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653524.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656913.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000589293.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665833.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654780.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655121.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664576.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666910.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671257.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663100.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670613.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656570.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664250.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670316.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665019.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668690.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000590484.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662324.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671483.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660685.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669575.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668386.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654480.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663615.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669163.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000590589.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659946.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000217515.11	MANE_select
ENST00000590954.5	alternative 5' UTR
ENST00000590954.5	upstream uORF
ENST00000587613.1	upstream uORF
ENST00000589329.5	alternative 5' UTR
ENST00000589329.5	upstream uORF
ENST00000254442.8	MANE_select
ENST00000593058.1	alternative 5' UTR
ENST00000668805.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000585477.2	MANE_select
ENST00000324000.4	MANE_select
ENST00000324000.4	upstream uORF
ENST00000491143.3	MANE_select
ENST00000262093.11	CAGE supported TSS
ENST00000262093.11	LR annotation
ENST00000262093.11	MANE_select
ENST00000652755.1	CAGE supported TSS
ENST00000652755.1	LR annotation
ENST00000256854.10	MANE_select
ENST00000660188.1	Assembled from RACEseq reads
ENST00000649476.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000652880.1	Assembled from RACEseq reads
ENST00000648908.2	LR annotation
ENST00000648908.2	MANE_select
ENST00000585322.2	alternative 5' UTR
ENST00000585322.2	upstream uORF
ENST00000400345.8	MANE_select
ENST00000256830.13	confirm experimentally
ENST00000592846.5	alternative 5' UTR
ENST00000587547.1	NMD likely if extended
ENST00000435432.6	alternative 5' UTR
ENST00000456173.6	NP_001138443.1
ENST00000588494.5	alternative 5' UTR
ENST00000586268.5	alternative 5' UTR
ENST00000587190.5	alternative 5' UTR
ENST00000635997.1	CAGE supported TSS
ENST00000675101.1	CAGE supported TSS
ENST00000667453.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655521.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656883.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000361673.4	MANE_select
ENST00000649217.2	LR annotation
ENST00000649217.2	MANE_select
ENST00000649756.1	NMD likely if extended
ENST00000659493.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000591083.5	alternative 5' UTR
ENST00000588601.5	alternative 5' UTR
ENST00000590285.5	alternative 5' UTR
ENST00000586085.5	alternative 5' UTR
ENST00000589288.5	alternative 5' UTR
ENST00000591230.5	alternative 5' UTR
ENST00000588543.5	alternative 5' UTR
ENST00000590287.5	alternative 5' UTR
ENST00000592452.5	alternative 5' UTR
ENST00000588456.5	alternative 5' UTR
ENST00000591808.6	MANE_select
ENST00000591808.6	alternative 5' UTR
ENST00000589481.1	alternative 5' UTR
ENST00000591049.1	alternative 5' UTR
ENST00000589403.1	NMD likely if extended
ENST00000670499.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658546.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655415.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000591900.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655428.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663146.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000589729.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656626.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666207.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671255.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666703.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669170.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000587834.6	MANE_select
ENST00000256857.7	MANE_select
ENST00000334889.4	MANE_select
ENST00000555288.1	alternative 5' UTR
ENST00000299721.3	MANE_select
ENST00000251047.6	MANE_select
ENST00000439986.9	LR annotation
ENST00000439986.9	MANE_select
ENST00000316660.7	MANE_select
ENST00000668793.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000592121.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659042.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658928.1	Assembled from SLRseq reads (SRP049776)
ENST00000650201.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000667405.1	Assembled from SLRseq reads (SRP049776)
ENST00000299766.5	CAGE supported TSS
ENST00000299766.5	CARS
ENST00000299766.5	LR annotation
ENST00000299766.5	MANE_select
ENST00000655645.1	Assembled from SLRseq reads (SRP049776)
ENST00000262717.9	MANE_select
ENST00000538374.5	alternative 5' UTR
ENST00000666670.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000567801.3	Assembled from SLRseq reads (SRP049776)
ENST00000663426.1	Assembled from SLRseq reads (SRP049776)
ENST00000312828.4	MANE_select
ENST00000591306.5	alternative 5' UTR
ENST00000640252.2	MANE_select
ENST00000640252.2	non canonical genome sequence error
ENST00000639912.1	alternative 5' UTR
ENST00000640876.1	alternative 5' UTR
ENST00000357637.10	alternative 5' UTR
ENST00000640145.1	alternative 5' UTR
ENST00000640170.1	alternative 3' UTR
ENST00000639681.1	alternative 3' UTR
ENST00000400334.7	alternative 5' UTR
ENST00000400334.7	non canonical genome sequence error
ENST00000639902.1	alternative 5' UTR
ENST00000639758.1	alternative 5' UTR
ENST00000638936.1	alternative 5' UTR
ENST00000638424.1	non canonical TEC
ENST00000640050.1	alternative 5' UTR
ENST00000589339.6	alternative 5' UTR
ENST00000588571.6	alternative 5' UTR
ENST00000589414.6	non canonical genome sequence error
ENST00000585344.6	alternative 5' UTR
ENST00000585458.2	alternative 5' UTR
ENST00000585923.6	alternative 5' UTR
ENST00000585926.5	alternative 5' UTR
ENST00000644646.2	MANE_select
ENST00000591227.1	NMD likely if extended
ENST00000586569.3	MANE_select
ENST00000269499.10	MANE_select
ENST00000591632.5	NMD likely if extended
ENST00000262719.10	MANE_select
ENST00000333681.5	MANE_select
ENST00000333681.5	alternative 5' UTR
ENST00000645214.2	LR annotation
ENST00000645214.2	MANE_select
ENST00000238497.10	MANE_select
ENST00000382771.9	MANE_select
ENST00000424602.1	alternative 5' UTR
ENST00000344731.10	MANE_select
ENST00000341074.10	MANE_select
ENST00000544088.6	MANE_select
ENST00000544088.6	alternative 5' UTR
ENST00000467649.2	non canonical other
ENST00000283752.10	MANE_select
ENST00000425392.5	Alternatively spliced 5' UTR, shares CDs with AC072051.1-001 (partial)
ENST00000425392.5	alternative 5' UTR
ENST00000398019.7	MANE_select
ENST00000299502.9	MANE_select
ENST00000238508.8	MANE_select
ENST00000408945.5	MANE_select
ENST00000526932.1	This allelic splice variant of HMSD is the precursor of the histocompatibility antigen ACC-6. It is translated in a different frame to HMSD. PubMed=17409267
ENST00000397985.7	MANE_select
ENST00000649298.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000662844.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657802.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653560.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417298.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665461.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657385.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658718.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666468.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669878.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671534.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669361.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657912.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662600.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663021.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665443.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659895.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668958.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649058.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000662570.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000582028.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659490.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000323011.7	alternative 5' UTR
ENST00000397968.4	MANE_select
ENST00000262150.7	MANE_select
ENST00000580157.2	alternative 5' UTR
ENST00000658992.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666895.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000580057.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661028.1	Assembled from SLRseq reads (SRP049776)
ENST00000657287.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000299608.7	MANE_select
ENST00000299608.7	upstream ATG
ENST00000578970.5	alternative 5' UTR
ENST00000582371.5	alternative 5' UTR
ENST00000584775.5	alternative 5' UTR
ENST00000360242.9	MANE_select
ENST00000581520.1	alternative 5' UTR
ENST00000649672.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000659514.1	Assembled from SLRseq reads (SRP049776)
ENST00000382713.10	MANE_select
ENST00000582621.6	MANE_select
ENST00000582621.6	alternative 5' UTR
ENST00000577287.5	alternative 5' UTR
ENST00000579496.5	alternative 5' UTR
ENST00000583955.5	alternative 5' UTR
ENST00000580335.1	alternative 5' UTR
ENST00000640769.2	MANE_select
ENST00000578780.2	CAGE supported TSS
ENST00000255674.11	confirm experimentally
ENST00000666381.1	Assembled from SLRseq reads (SRP049776)
ENST00000668900.1	Assembled from SLRseq reads (SRP049776)
ENST00000397942.4	MANE_select
ENST00000578377.1	alternative 5' UTR
ENST00000582322.1	alternative 5' UTR
ENST00000671274.1	Assembled from SLRseq reads (SRP049776)
ENST00000670401.1	Assembled from SLRseq reads (SRP049776)
ENST00000658819.1	Assembled from SLRseq reads (SRP049776)
ENST00000581940.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000585159.5	alternative 5' UTR
ENST00000269503.9	MANE_select
ENST00000583169.5	alternative 3' UTR
ENST00000327305.11	MANE_select
ENST00000582281.1	alternative 3' UTR
ENST00000664848.1	Assembled from SLRseq reads (SRP049776)
ENST00000581862.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669547.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661525.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667943.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654686.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653686.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666831.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000563172.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664821.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659659.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000583942.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660490.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667770.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648529.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000419743.7	MANE_select
ENST00000169551.11	MANE_select
ENST00000340533.9	MANE_select
ENST00000494131.6	NMD exception
ENST00000660707.1	Assembled from SLRseq reads (SRP049776)
ENST00000579455.2	MANE_select
ENST00000579455.2	non canonical TEC
ENST00000343998.8	MANE_select
ENST00000653759.1	Assembled from SLRseq reads (SRP049776)
ENST00000581272.5	alternative 5' UTR
ENST00000579847.5	alternative 5' UTR
ENST00000581513.5	alternative 5' UTR
ENST00000324262.9	MANE_select
ENST00000577600.5	alternative 5' UTR
ENST00000579583.5	alternative 5' UTR
ENST00000584613.5	alternative 5' UTR
ENST00000583216.5	alternative 5' UTR
ENST00000581912.1	alternative 5' UTR
ENST00000582589.5	alternative 5' UTR
ENST00000583785.5	alternative 5' UTR
ENST00000358821.8	MANE_select
ENST00000582365.1	not organism-supported
ENST00000654728.1	Assembled from SLRseq reads (SRP049776)
ENST00000670940.1	Assembled from SLRseq reads (SRP049776)
ENST00000669094.1	Assembled from SLRseq reads (SRP049776)
ENST00000652782.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664604.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657978.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000647939.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000322342.4	MANE_select
ENST00000582437.1	alternative 5' UTR
ENST00000581620.1	alternative 5' UTR
ENST00000580243.3	MANE_select
ENST00000560918.2	alternative 5' UTR
ENST00000560661.1	alternative 5' UTR
ENST00000670021.1	Assembled from SLRseq reads (SRP049776)
ENST00000647884.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000579022.5	MANE_select
ENST00000657893.1	Assembled from SLRseq reads (SRP049776)
ENST00000664948.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663697.1	Assembled from SLRseq reads (SRP049776)
ENST00000657842.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662762.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662237.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653783.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664600.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000581750.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661638.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657827.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657495.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658613.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653015.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661349.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668569.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000579714.1	not organism-supported
ENST00000443185.7	MANE_select
ENST00000617840.1	suspected genomic sequence error affecting CDS in exon 1
ENST00000532857.1	alternative 5' UTR
ENST00000657360.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000578613.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000583578.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671551.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670438.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669527.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661652.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670618.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659606.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653843.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668504.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651044.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000666393.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661369.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664503.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657675.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655002.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666531.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655357.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665281.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651395.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000668375.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663049.1	Assembled from SLRseq reads (SRP049776)
ENST00000655528.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658441.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658647.1	Assembled from SLRseq reads (SRP049776)
ENST00000652480.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000582231.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658908.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658993.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661118.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661700.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656854.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000611889.1	FLJ44881
ENST00000320610.14	MANE_select
ENST00000355994.7	MANE_select
ENST00000355994.7	genebuild_only_MANE
ENST00000498683.2	alternative 5' UTR
ENST00000397860.7	alternative 5' UTR
ENST00000581878.5	alternative 5' UTR
ENST00000583798.1	alternative 5' UTR
ENST00000670694.1	Assembled from SLRseq reads (SRP049776)
ENST00000299727.5	MANE_select
ENST00000583629.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657574.1	Assembled from SLRseq reads (SRP049776)
ENST00000657337.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000669341.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671271.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666771.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668585.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667842.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661306.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662598.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662109.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662085.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656930.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000578833.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654461.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426216.6	MANE_select
ENST00000652152.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000591814.5	downstream ATG
ENST00000427363.7	MANE_select
ENST00000651685.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000622987.1	confirm experimentally
ENST00000666976.1	Assembled from SLRseq reads (SRP049776)
ENST00000613122.5	MANE_select
ENST00000397778.7	MANE_select
ENST00000655769.1	Assembled from SLRseq reads (SRP049776)
ENST00000451882.3	MANE_select
ENST00000269601.10	MANE_select
ENST00000592957.1	alternative 5' UTR
ENST00000592837.1	alternative 5' UTR
ENST00000306735.10	MANE_select
ENST00000262198.9	MANE_select
ENST00000559951.5	alternative 5' UTR
ENST00000662611.1	Assembled from SLRseq reads (SRP049776)
ENST00000353265.8	MANE_select
ENST00000632280.1	confirm experimentally
ENST00000631744.1	confirm experimentally
ENST00000641173.1	ENA ID EGAS00001001486
ENST00000641984.1	ENA ID EGAS00001001486
ENST00000585993.3	ENA ID EGAS00001001486
ENST00000618231.3	ENA ID EGAS00001001486
ENST00000618231.3	alternative 5' UTR
ENST00000641591.1	ENA ID EGAS00001001486
ENST00000632624.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660559.1	Assembled from SLRseq reads (SRP049776)
ENST00000666656.1	Assembled from SLRseq reads (SRP049776)
ENST00000434325.7	MANE_select
ENST00000633125.1	alternative 5' UTR
ENST00000592722.1	NMD likely if extended
ENST00000342640.9	MANE_select
ENST00000662087.1	Assembled from SLRseq reads (SRP049776)
ENST00000332235.8	MANE_select
ENST00000590113.4	NMD likely if extended
ENST00000315489.5	MANE_select
ENST00000587541.5	CAGE supported TSS
ENST00000215637.8	MANE_select
ENST00000382683.8	CAGE supported TSS
ENST00000359315.6	MANE_select
ENST00000359315.6	upstream ATG
ENST00000215574.9	MANE_select
ENST00000264553.6	MANE_select
ENST00000545507.6	CAGE supported TSS
ENST00000545507.6	alternative 5' UTR
ENST00000346916.9	CAGE supported TSS
ENST00000346916.9	alternative 5' UTR
ENST00000346916.9	upstream ATG
ENST00000679472.1	align_id:3630988|asmbl_121153
ENST00000680552.1	align_id:3630989|asmbl_121154
ENST00000680065.1	align_id:3630987|asmbl_121152
ENST00000576925.4	align_id:3630985|asmbl_121150
ENST00000333511.9	MANE_select
ENST00000614867.2	alternative 3' UTR
ENST00000618112.4	align_id:3630986|asmbl_121151
ENST00000573784.6	CAGE supported TSS
ENST00000573784.6	alternative 5' UTR
ENST00000576984.3	CAGE supported TSS
ENST00000576984.3	alternative 5' UTR
ENST00000251287.3	MANE_select
ENST00000588649.7	MANE_select
ENST00000588649.7	upstream ATG
ENST00000292363.10	MANE_select
ENST00000166139.9	MANE_select
ENST00000589185.2	CAGE supported TSS
ENST00000592947.5	CAGE supported TSS
ENST00000592947.5	alternative 5' UTR
ENST00000588773.5	CAGE supported TSS
ENST00000588773.5	alternative 5' UTR
ENST00000591573.1	CAGE supported TSS
ENST00000605925.3	CAGE supported TSS
ENST00000605925.3	alternative 5' UTR
ENST00000329267.9	MANE_select
ENST00000329267.9	NAGNAG splice site
ENST00000613411.4	NAGNAG splice site
ENST00000338448.10	MANE_select
ENST00000586055.2	CAGE supported TSS
ENST00000215582.8	MANE_select
ENST00000614180.1	NMD likely if extended
ENST00000654818.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000606242.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666859.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665908.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662249.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000356948.11	MANE_select
ENST00000350092.8	CAGE supported TSS
ENST00000520876.8	MANE_select
ENST00000519502.2	alternative 5' UTR
ENST00000233997.4	MANE_select
ENST00000234347.10	MANE_select
ENST00000263621.2	MANE_select
ENST00000263621.2	genebuild_only_MANE
ENST00000327726.11	CAGE supported TSS
ENST00000327726.11	MANE_select
ENST00000325464.6	MANE_select
ENST00000325464.6	SLRseq reads (ENA:SRP049776) supports 5' end
ENST00000586342.1	alternative 5' UTR
ENST00000361574.10	MANE_select
ENST00000234371.10	MANE_select
ENST00000585809.6	MANE_select
ENST00000234389.3	MANE_select
ENST00000356663.8	MANE_select
ENST00000263097.9	CAGE supported TSS
ENST00000263097.9	MANE_select
ENST00000568865.3	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000566695.5	CAGE supported TSS
ENST00000263094.11	CAGE supported TSS
ENST00000263094.11	MANE_select
ENST00000524850.5	alternative 5' UTR
ENST00000313093.7	MANE_select
ENST00000543365.5	CAGE supported TSS
ENST00000590577.2	CAGE supported TSS
ENST00000615234.5	MANE_select
ENST00000586746.5	alternative 3' UTR
ENST00000612655.4	alternative 3' UTR
ENST00000585838.2	alternative 3' UTR
ENST00000614705.4	NMD likely if extended
ENST00000354171.13	MANE_select
ENST00000611653.4	CAGE supported TSS
ENST00000593032.5	CAGE supported TSS
ENST00000588919.5	CAGE supported TSS
ENST00000585362.6	CAGE supported TSS
ENST00000614791.1	CAGE supported TSS
ENST00000361757.8	MANE_select
ENST00000590998.5	alternative 5' UTR
ENST00000590176.5	alternative 5' UTR
ENST00000587655.2	alternative 5' UTR
ENST00000585748.2	non canonical U12
ENST00000326873.12	MANE_select
ENST00000326873.12	non canonical U12
ENST00000652231.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000652231.1	non canonical U12
ENST00000593219.5	non canonical U12
ENST00000589152.5	non canonical U12
ENST00000586358.5	non canonical U12
ENST00000585465.2	NMD exception
ENST00000590083.5	NAGNAG splice site
ENST00000589260.5	NAGNAG splice site
ENST00000395633.5	alternative 3' UTR
ENST00000215375.7	MANE_select
ENST00000215375.7	alternative 3' UTR
ENST00000591660.5	alternative 3' UTR
ENST00000586757.5	alternative 5' UTR
ENST00000588030.5	alternative 5' UTR
ENST00000588411.5	alternative 5' UTR
ENST00000592051.1	alternative 5' UTR
ENST00000586472.5	alternative 5' UTR
ENST00000589266.5	alternative 5' UTR
ENST00000588090.5	alternative 5' UTR
ENST00000592815.5	alternative 5' UTR
ENST00000591935.5	alternative 5' UTR
ENST00000586548.5	alternative 5' UTR
ENST00000585630.5	alternative 5' UTR
ENST00000589710.5	alternative 5' UTR
ENST00000586773.5	alternative 5' UTR
ENST00000587323.5	alternative 5' UTR
ENST00000588230.5	alternative 5' UTR
ENST00000413636.6	alternative 5' UTR
ENST00000587896.6	MANE_select
ENST00000587896.6	alternative 5' UTR
ENST00000589235.5	alternative 5' UTR
ENST00000409293.6	MANE_select
ENST00000469144.5	CAGE supported TSS
ENST00000215368.4	MANE_select
ENST00000592374.6	alternative 5' UTR
ENST00000592374.6	upstream ATG
ENST00000591337.7	MANE_select
ENST00000591337.7	align_id:3631097|asmbl_121262
ENST00000591806.6	alternative 5' UTR
ENST00000591806.6	upstream ATG
ENST00000415183.7	upstream ATG
ENST00000546283.5	alternative 5' UTR
ENST00000313408.11	alternative 5' UTR
ENST00000233627.14	MANE_select
ENST00000414651.3	alternative 5' UTR
ENST00000626781.2	Assembled from SLRseq reads (SRP049776)
ENST00000650765.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000252288.8	MANE_select
ENST00000336761.10	NAGNAG splice site
ENST00000233078.9	MANE_select
ENST00000233078.9	NAGNAG splice site
ENST00000592522.5	NAGNAG splice site
ENST00000586579.5	NMD likely if extended
ENST00000587079.5	NAGNAG splice site
ENST00000592453.2	NAGNAG splice site
ENST00000589484.5	NAGNAG splice site
ENST00000589484.5	at the final exon
ENST00000586686.6	alternative 5' UTR
ENST00000592588.7	MANE_select
ENST00000586656.5	alternative 5' UTR
ENST00000591804.6	alternative 5' UTR
ENST00000617694.4	alternative 5' UTR
ENST00000617694.4	alternative exon 4
ENST00000585665.2	alternative 5' UTR
ENST00000594262.1	CAGE supported TSS
ENST00000587869.5	alternative 5' UTR
ENST00000590469.6	CAGE supported TSS
ENST00000590469.6	MANE_select
ENST00000590469.6	NAGNAG splice site
ENST00000590469.6	alternative 5' UTR
ENST00000590877.5	NAGNAG splice site
ENST00000590877.5	alternative 5' UTR
ENST00000590877.5	at exon
ENST00000593146.1	NAGNAG splice site
ENST00000535453.5	NAGNAG splice site
ENST00000535453.5	alternative 5' UTR
ENST00000587149.6	alternative 5' UTR
ENST00000238483.5	NAGNAG splice site
ENST00000436106.3	alternative 5' UTR
ENST00000585675.6	MANE_select
ENST00000585675.6	alternative 5' UTR
ENST00000586564.5	alternative 5' UTR
ENST00000592872.5	alternative 5' UTR
ENST00000651077.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000233596.8	MANE_select
ENST00000330475.9	MANE_select
ENST00000586272.5	alternative 5' UTR
ENST00000590562.5	alternative 5' UTR
ENST00000673796.1	alternative 5' UTR
ENST00000454744.7	MANE_select
ENST00000454744.7	alternative 5' UTR
ENST00000334770.9	alternative 5' UTR
ENST00000605173.2	non canonical TEC
ENST00000434436.8	MANE_select
ENST00000585967.5	CAGE supported TSS
ENST00000585967.5	alternative 5' UTR
ENST00000592361.2	alternative 5' UTR
ENST00000592965.2	CAGE supported TSS
ENST00000592965.2	alternative 5' UTR
ENST00000585937.1	alternative 5' UTR
ENST00000591899.8	MANE_select
ENST00000589880.1	alternative 3' UTR
ENST00000585671.2	alternative 3' UTR
ENST00000592395.5	NAGNAG splice site
ENST00000262965.12	CAGE supported TSS
ENST00000262965.12	LR annotation
ENST00000262965.12	MANE_select
ENST00000262965.12	alternative 3' UTR
ENST00000588136.7	CAGE supported TSS
ENST00000588136.7	LR annotation
ENST00000592628.5	alternative 3' UTR
ENST00000593064.5	alternative 3' UTR
ENST00000453954.6	NAGNAG splice site
ENST00000585731.5	NAGNAG splice site
ENST00000590684.5	NAGNAG splice site
ENST00000590684.5	alternative 3' UTR
ENST00000585855.2	NAGNAG splice site
ENST00000610756.4	NAGNAG splice site
ENST00000590605.2	NAGNAG splice site
ENST00000586410.2	NAGNAG splice site
ENST00000587235.6	alternative 5' UTR
ENST00000586318.1	alternative 5' UTR
ENST00000382349.5	MANE_select
ENST00000310127.10	alternative 5' UTR
ENST00000587160.2	alternative 5' UTR
ENST00000170168.9	MANE_select
ENST00000643515.1	CAGE supported TSS
ENST00000587524.1	NMD likely if extended
ENST00000250916.6	MANE_select
ENST00000592313.1	CAGE supported TSS
ENST00000292577.12	MANE_select
ENST00000414057.6	alternative 5' UTR
ENST00000489554.1	NMD likely if extended
ENST00000316097.13	MANE_select
ENST00000411971.5	alternative 5' UTR
ENST00000588907.2	CAGE supported TSS
ENST00000588907.2	alternative 5' UTR
ENST00000590266.5	alternative 5' UTR
ENST00000621748.1	alternative 5' UTR
ENST00000329478.4	MANE_select
ENST00000454697.1	alternative 5' UTR
ENST00000255641.13	MANE_select
ENST00000591752.5	alternative 5' UTR
ENST00000255608.9	MANE_select
ENST00000590646.5	alternative 5' UTR
ENST00000587742.5	alternative 5' UTR
ENST00000588395.1	alternative 5' UTR
ENST00000591142.5	CAGE supported TSS
ENST00000250896.9	CAGE supported TSS
ENST00000250896.9	MANE_select
ENST00000588014.5	alternative 5' UTR
ENST00000591588.1	CAGE supported TSS
ENST00000589509.5	alternative 5' UTR
ENST00000589534.2	alternative 5' UTR
ENST00000357066.8	MANE_select
ENST00000592280.1	alternative 5' UTR
ENST00000591638.1	alternative 5' UTR
ENST00000591326.5	alternative 5' UTR
ENST00000591236.1	alternative 5' UTR
ENST00000589902.5	alternative 5' UTR
ENST00000586676.5	alternative 5' UTR
ENST00000588048.2	alternative 5' UTR
ENST00000395307.6	upstream ATG
ENST00000395301.8	MANE_select
ENST00000643116.3	LR annotation
ENST00000643116.3	MANE_select
ENST00000591631.2	NMD likely if extended
ENST00000398665.8	MANE_select
ENST00000608122.1	NMD likely if extended
ENST00000482433.1	FLJ37961
ENST00000326631.7	CAGE supported TSS
ENST00000326631.7	MANE_select
ENST00000589097.6	alternative 5' UTR
ENST00000221494.10	MANE_select
ENST00000586396.2	alternative 5' UTR
ENST00000221496.5	MANE_select
ENST00000300961.10	MANE_select
ENST00000300961.10	alternative 5' UTR
ENST00000593238.2	CAGE supported TSS
ENST00000593238.2	alternative 5' UTR
ENST00000602676.6	non canonical other
ENST00000582888.8	non canonical other
ENST00000342063.5	MANE_select
ENST00000585527.1	upstream ATG
ENST00000661102.1	Assembled from SLRseq reads (SRP049776)
ENST00000252622.15	MANE_select
ENST00000613503.5	MANE_select
ENST00000622308.4	NAGNAG splice site
ENST00000612623.1	NAGNAG splice site
ENST00000649857.1	CAGE supported TSS
ENST00000215570.8	MANE_select
ENST00000325327.4	MANE_select
ENST00000215631.9	MANE_select
ENST00000382159.8	MANE_select
ENST00000323469.5	MANE_select
ENST00000585334.1	alternative 5' UTR
ENST00000588128.1	alternative 5' UTR
ENST00000660775.1	Assembled from SLRseq reads (SRP049776)
ENST00000269740.9	MANE_select
ENST00000589363.5	alternative 5' UTR
ENST00000589166.1	alternative 5' UTR
ENST00000455372.2	overlapping uORF
ENST00000221566.7	MANE_select
ENST00000676943.1	alternative 5' UTR
ENST00000589251.5	alternative 5' UTR
ENST00000587866.1	alternative 5' UTR
ENST00000307741.11	MANE_select
ENST00000586780.1	NMD likely if extended
ENST00000591149.5	NMD likely if extended
ENST00000317243.10	MANE_select
ENST00000591539.1	NAGNAG splice site
ENST00000334241.9	MANE_select
ENST00000661023.1	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000586426.5	NAGNAG splice site
ENST00000307635.3	MANE_select
ENST00000306908.10	MANE_select
ENST00000654521.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657707.1	Assembled from SLRseq reads (SRP049776)
ENST00000314531.5	MANE_select
ENST00000453329.5	alternative 5' UTR
ENST00000468176.7	NMD likely if extended
ENST00000246112.9	MANE_select
ENST00000262953.11	MANE_select
ENST00000590536.5	NAGNAG splice site
ENST00000592584.1	alternative 5' UTR
ENST00000327141.9	MANE_select
ENST00000078429.9	MANE_select
ENST00000586763.1	NMD likely if extended
ENST00000262958.4	MANE_select
ENST00000246115.5	MANE_select
ENST00000246117.9	MANE_select
ENST00000592737.5	NAGNAG splice site
ENST00000292672.7	MANE_select
ENST00000592230.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000586919.5	confirm experimentally
ENST00000443272.3	MANE_select
ENST00000588839.1	NMD likely if extended
ENST00000215531.6	MANE_select
ENST00000591708.1	alternative 5' UTR
ENST00000641816.1	CAGE supported TSS
ENST00000427575.6	MANE_select
ENST00000427575.6	alternative 5' UTR
ENST00000441788.7	MANE_select
ENST00000652521.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000355415.7	MANE_select
ENST00000591878.1	NMD likely if extended
ENST00000586402.1	NMD likely if extended
ENST00000416526.5	alternative 5' UTR
ENST00000333651.11	MANE_select
ENST00000453933.5	alternative 5' UTR
ENST00000585741.1	NMD likely if extended
ENST00000644452.3	CAGE supported TSS
ENST00000644452.3	LR annotation
ENST00000644452.3	MANE_select
ENST00000375190.10	MANE_select
ENST00000591726.1	alternative 3' UTR
ENST00000592721.5	alternative 3' UTR
ENST00000429344.7	MANE_select
ENST00000335312.8	MANE_select
ENST00000636612.1	NMD likely if extended
ENST00000541714.7	MANE_select
ENST00000541714.7	NP_001254489.1
ENST00000316757.4	MANE_select
ENST00000330133.5	MANE_select
ENST00000555633.3	MANE_select
ENST00000555633.3	alternative 5' UTR
ENST00000310132.11	MANE_select
ENST00000585778.5	NAGNAG splice site
ENST00000395045.6	upstream uORF
ENST00000587180.1	upstream uORF
ENST00000590028.5	alternative 5' UTR
ENST00000590849.1	alternative 5' UTR
ENST00000591059.1	alternative 5' UTR
ENST00000590980.1	upstream uORF
ENST00000590821.1	NMD likely if extended
ENST00000592612.1	NAGNAG splice site
ENST00000592300.1	NAGNAG splice site
ENST00000262961.9	MANE_select
ENST00000591965.5	NMD likely if extended
ENST00000674260.1	Assembled from SLRseq reads (SRP049776)
ENST00000591712.1	alternative 5' UTR
ENST00000598136.5	alternative 5' UTR
ENST00000595916.5	NMD likely if extended
ENST00000450849.7	MANE_select
ENST00000600960.1	confirm experimentally
ENST00000545797.7	MANE_select
ENST00000596311.5	alternative 5' UTR
ENST00000601824.1	alternative 5' UTR
ENST00000593844.1	alternative 5' UTR
ENST00000309311.7	MANE_select
ENST00000600720.1	NMD likely if extended
ENST00000262971.3	MANE_select
ENST00000599999.5	NMD likely if extended
ENST00000593518.1	NMD likely if extended
ENST00000322357.9	MANE_select
ENST00000601588.1	alternative 5' UTR
ENST00000262948.10	MANE_select
ENST00000599345.1	NMD likely if extended
ENST00000078445.7	MANE_select
ENST00000595923.5	NAGNAG splice site
ENST00000595923.5	confirm experimentally
ENST00000337491.7	MANE_select
ENST00000221847.6	MANE_select
ENST00000262962.12	MANE_select
ENST00000543264.7	MANE_select
ENST00000543264.7	upstream uORF
ENST00000221856.11	MANE_select
ENST00000598010.5	NMD likely if extended
ENST00000594605.6	MANE_select
ENST00000599736.5	upstream uORF
ENST00000599840.6	MANE_select
ENST00000269886.7	MANE_select
ENST00000593591.5	upstream uORF
ENST00000598230.5	alternative 5' UTR
ENST00000598230.5	upstream ATG
ENST00000598219.1	alternative 5' UTR
ENST00000598219.1	upstream uORF
ENST00000301280.10	MANE_select
ENST00000587580.1	NMD likely if extended
ENST00000585371.1	NMD likely if extended
ENST00000301281.11	MANE_select
ENST00000616600.5	MANE_select
ENST00000621835.4	NAGNAG splice site
ENST00000589486.5	alternative 5' UTR
ENST00000633942.1	CAGE supported TSS
ENST00000633942.1	confirm experimentally
ENST00000381848.7	MANE_select
ENST00000592610.1	alternative 5' UTR
ENST00000306390.7	MANE_select
ENST00000586582.6	MANE_select
ENST00000327473.9	MANE_select
ENST00000262947.8	MANE_select
ENST00000594671.5	confirm experimentally
ENST00000262960.14	MANE_select
ENST00000598800.5	confirm experimentally
ENST00000600621.5	alternative 5' UTR
ENST00000602161.5	alternative 5' UTR
ENST00000598360.5	alternative 5' UTR
ENST00000598041.5	alternative 5' UTR
ENST00000601130.5	alternative 5' UTR
ENST00000595940.5	NMD likely if extended
ENST00000593973.1	alternative 5' UTR
ENST00000593973.1	confirm experimentally
ENST00000600497.5	NMD likely if extended
ENST00000655857.1	Assembled from SLRseq reads (SRP049776)
ENST00000658818.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655163.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663176.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662725.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668602.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668602.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000654534.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656089.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000592663.6	Assembled from SLRseq reads (SRP049776)
ENST00000658545.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669889.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657474.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000586721.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000591008.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000591008.2	NAGNAG splice site
ENST00000669248.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667444.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664951.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666978.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656469.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000588711.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667223.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660973.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663804.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661584.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665092.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670508.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000589368.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663010.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653646.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655375.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666837.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654084.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666056.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653012.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653355.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000317292.8	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657100.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667215.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660172.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660889.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655494.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653316.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669700.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000669408.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670131.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662608.1	Assembled from SLRseq reads (SRP049776)
ENST00000588923.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000269856.5	MANE_select
ENST00000248244.6	MANE_select
ENST00000221957.9	MANE_select
ENST00000587462.1	alternative 5' UTR
ENST00000381781.2	NP_001073992.1
ENST00000381781.2	not organism-supported
ENST00000650722.2	MANE_select
ENST00000650722.2	NP_001073992.1
ENST00000650722.2	confirm experimentally
ENST00000650722.2	upstream ATG
ENST00000650932.1	MANE_select
ENST00000650932.1	genebuild_only_MANE
ENST00000615884.4	alternative 5' UTR
ENST00000159111.9	MANE_select
ENST00000588337.5	alternative 5' UTR
ENST00000591760.5	alternative 5' UTR
ENST00000586065.1	alternative 5' UTR
ENST00000222033.6	MANE_select
ENST00000448587.5	NMD exception
ENST00000587632.1	NMD exception
ENST00000587632.1	alternative 3' UTR
ENST00000252542.9	MANE_select
ENST00000588852.2	MANE_select
ENST00000588852.2	NP_001188267.1
ENST00000592224.5	NAGNAG splice site
ENST00000592224.5	NP_001188268.1
ENST00000586934.5	NMD likely if extended
ENST00000454510.5	NP_001188269.1
ENST00000579649.5	alternative 5' UTR
ENST00000582380.6	overlapping uORF
ENST00000577222.5	alternative 5' UTR
ENST00000577222.5	overlapping uORF
ENST00000347512.8	MANE_select
ENST00000394580.2	alternative 5' UTR
ENST00000309324.9	MANE_select
ENST00000577257.5	alternative 5' UTR
ENST00000581773.5	alternative 5' UTR
ENST00000339423.7	MANE_select
ENST00000583928.5	alternative 5' UTR
ENST00000581521.5	alternative 5' UTR
ENST00000578832.5	alternative 5' UTR
ENST00000360614.8	MANE_select
ENST00000381624.4	MANE_select
ENST00000419421.3	MANE_select
ENST00000419421.3	NP_001127788.1
ENST00000309061.12	MANE_select
ENST00000303212.2	upstream uORF
ENST00000318336.10	CAGE supported TSS
ENST00000318336.10	alternative 5' UTR
ENST00000524754.1	alternative 5' UTR
ENST00000527106.5	alternative 5' UTR
ENST00000531085.5	alternative 5' UTR
ENST00000531199.1	alternative 5' UTR
ENST00000532464.5	alternative 5' UTR
ENST00000528505.1	alternative 5' UTR
ENST00000303225.11	alternative 5' UTR
ENST00000458379.7	alternative 5' UTR
ENST00000589620.5	alternative 5' UTR
ENST00000589714.1	alternative 5' UTR
ENST00000587048.1	alternative 5' UTR
ENST00000587183.1	alternative 5' UTR
ENST00000588525.1	MANE_select
ENST00000308961.5	MANE_select
ENST00000650663.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000339485.4	MANE_select
ENST00000452990.8	NP_542157.1
ENST00000452990.8	upstream ATG
ENST00000588776.8	MANE_select
ENST00000588776.8	upstream ATG
ENST00000340578.10	MANE_select
ENST00000591881.5	NAGNAG splice site
ENST00000303657.10	MANE_select
ENST00000359161.7	alternative 5' UTR
ENST00000592172.5	NMD likely if extended
ENST00000586940.1	NMD likely if extended
ENST00000592883.5	alternative 5' UTR
ENST00000593241.5	alternative 5' UTR
ENST00000592281.5	alternative 5' UTR
ENST00000587181.1	alternative 5' UTR
ENST00000591738.5	alternative 5' UTR
ENST00000588722.5	alternative 5' UTR
ENST00000588485.6	CAGE supported TSS
ENST00000588485.6	MANE_select
ENST00000591403.5	alternative 5' UTR
ENST00000589401.5	alternative 5' UTR
ENST00000252674.9	MANE_select
ENST00000301452.5	MANE_select
ENST00000245816.11	CAGE supported TSS
ENST00000245816.11	LR annotation
ENST00000245816.11	MANE_select
ENST00000596149.5	CAGE supported TSS
ENST00000245812.8	MANE_select
ENST00000394456.10	MANE_select
ENST00000598607.1	alternative 5' UTR
ENST00000596254.1	LOC390877
ENST00000600480.2	CAGE supported TSS
ENST00000600480.2	MANE_select
ENST00000595258.1	alternative 5' UTR
ENST00000321510.7	MANE_select
ENST00000301454.9	MANE_select
ENST00000598494.5	alternative 5' UTR
ENST00000600229.6	MANE_select
ENST00000308243.7	alternative 5' UTR
ENST00000381480.7	MANE_select
ENST00000590173.5	alternative 5' UTR
ENST00000591030.5	NMD likely if extended
ENST00000590473.5	alternative 5' UTR
ENST00000588421.1	alternative 5' UTR
ENST00000264071.7	MANE_select
ENST00000601640.5	alternative 5' UTR
ENST00000245817.5	MANE_select
ENST00000245903.4	MANE_select
ENST00000597430.2	alternative 5' UTR
ENST00000675206.1	CAGE supported TSS
ENST00000675206.1	MANE_select
ENST00000245907.11	MANE_select
ENST00000597298.5	alternative 5' UTR
ENST00000313244.14	MANE_select
ENST00000596673.1	alternative 5' UTR
ENST00000245908.11	MANE_select
ENST00000602142.6	MANE_select
ENST00000304076.6	NP_001245135
ENST00000596764.5	NP_001245136
ENST00000312053.9	MANE_select
ENST00000636986.2	MANE_select
ENST00000252840.11	MANE_select
ENST00000302850.10	MANE_select
ENST00000668164.2	CAGE supported TSS
ENST00000668164.2	MANE_select
ENST00000671891.2	CAGE supported TSS
ENST00000617428.4	alternative 5' UTR
ENST00000359920.11	upstream ATG
ENST00000221480.6	MANE_select
ENST00000596132.5	alternative 5' UTR
ENST00000361664.7	MANE_select
ENST00000597207.1	alternative 5' UTR
ENST00000601176.1	alternative 5' UTR
ENST00000596712.1	alternative 5' UTR
ENST00000597229.2	MANE_select
ENST00000264079.11	MANE_select
ENST00000221249.10	NAGNAG splice site
ENST00000601668.5	alternative 5' UTR
ENST00000601001.5	alternative 5' UTR
ENST00000545201.6	NAGNAG splice site
ENST00000545201.6	NP_001159584.1
ENST00000414982.7	NAGNAG splice site
ENST00000414982.7	NP_001159583.1
ENST00000450331.7	NAGNAG splice site
ENST00000450331.7	alternative 5' UTR
ENST00000600942.5	alternative 5' UTR
ENST00000593924.5	alternative 5' UTR
ENST00000600737.6	MANE_select
ENST00000600737.6	NAGNAG splice site
ENST00000599951.1	NAGNAG splice site
ENST00000160298.9	MANE_select
ENST00000358368.5	MANE_select
ENST00000594797.6	MANE_select
ENST00000311069.6	MANE_select
ENST00000221283.10	MANE_select
ENST00000221515.6	MANE_select
ENST00000596148.3	MANE_select
ENST00000317378.5	alternative 5' UTR
ENST00000426877.2	alternative 5' UTR
ENST00000597921.6	MANE_select
ENST00000597921.6	alternative 5' UTR
ENST00000676742.1	CHS.25531.6
ENST00000315599.12	MANE_select
ENST00000327325.10	MANE_select
ENST00000600802.1	NMD likely if extended
ENST00000618550.5	MANE_select
ENST00000306708.11	MANE_select
ENST00000598224.5	alternative 5' UTR
ENST00000593511.1	alternative 5' UTR
ENST00000599367.1	alternative 5' UTR
ENST00000397979.4	MANE_select
ENST00000565886.2	MANE_select
ENST00000221573.11	MANE_select
ENST00000318978.6	MANE_select
ENST00000270538.8	MANE_select
ENST00000270538.8	upstream uORF
ENST00000595831.5	NAGNAG splice site
ENST00000652364.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000407627.7	MANE_select
ENST00000596459.5	alternative 5' UTR
ENST00000680646.1	alternative 5' UTR
ENST00000680507.1	alternative 5' UTR
ENST00000680450.1	CAGE supported TSS
ENST00000680450.1	alternative 5' UTR
ENST00000681526.1	alternative 5' UTR
ENST00000680506.1	CAGE supported TSS
ENST00000680506.1	upstream ATG
ENST00000315626.6	CAGE supported TSS
ENST00000390669.7	NAGNAG splice site
ENST00000390669.7	alternative 5' UTR
ENST00000458625.5	NAGNAG splice site
ENST00000600128.6	MANE_select
ENST00000270509.6	alternative 5' UTR
ENST00000601739.5	alternative 5' UTR
ENST00000561008.5	alternative 5' UTR
ENST00000558268.5	alternative 5' UTR
ENST00000561053.5	alternative 5' UTR
ENST00000559450.5	alternative 5' UTR
ENST00000251363.10	MANE_select
ENST00000560412.1	alternative 5' UTR
ENST00000558877.1	alternative 5' UTR
ENST00000537716.6	NP_001159367.1
ENST00000301458.10	MANE_select
ENST00000596246.1	NMD likely if extended
ENST00000301457.3	MANE_select
ENST00000600659.3	MANE_select
ENST00000330915.7	MANE_select
ENST00000601886.1	NAGNAG splice site
ENST00000601886.1	alternative 5' UTR
ENST00000599192.5	NAGNAG splice site
ENST00000599192.5	alternative 5' UTR
ENST00000601770.1	alternative 5' UTR
ENST00000301455.7	MANE_select
ENST00000393962.6	NP_001034756.1
ENST00000600719.5	alternative 5' UTR
ENST00000328024.11	MANE_select
ENST00000595142.5	alternative 5' UTR
ENST00000601724.5	alternative 5' UTR
ENST00000215555.7	MANE_select
ENST00000595213.1	alternative 5' UTR
ENST00000325495.9	MANE_select
ENST00000423345.5	MANE_select
ENST00000393927.9	MANE_select
ENST00000644032.2	CAGE supported TSS
ENST00000644032.2	LR annotation
ENST00000644032.2	MANE_select
ENST00000598005.2	NMD likely if extended
ENST00000597188.6	MANE_select
ENST00000663339.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000673603.1	LOC107983991
ENST00000324436.5	MANE_select
ENST00000641125.1	ENA ID EGAS00001001486
ENST00000601372.6	MANE_select
ENST00000301475.1	alternative 5' UTR
ENST00000305625.2	alternative 5' UTR
ENST00000397910.8	confirm experimentally
ENST00000596956.1	NMD likely if extended
ENST00000641627.1	ENA ID EGAS00001001486
ENST00000641627.1	MANE_select
ENST00000641627.1	alternative 5' UTR
ENST00000641081.1	ENA ID EGAS00001001486
ENST00000541538.1	MANE_select
ENST00000305444.2	MANE_select
ENST00000247956.11	MANE_select
ENST00000642043.1	ENA ID EGAS00001001486
ENST00000642043.1	alternative 5' UTR
ENST00000641288.2	ENA ID EGAS00001001486
ENST00000641288.2	MANE_select
ENST00000641288.2	alternative 5' UTR
ENST00000641088.1	ENA ID EGAS00001001486
ENST00000641244.1	ENA ID EGAS00001001486
ENST00000641244.1	alternative 5' UTR
ENST00000641669.1	ENA ID EGAS00001001486
ENST00000641669.1	MANE_select
ENST00000641669.1	NAGNAG splice site
ENST00000641669.1	alternative 5' UTR
ENST00000641946.1	ENA ID EGAS00001001486
ENST00000456448.3	MANE_select
ENST00000591998.6	MANE_select
ENST00000603380.6	MANE_select
ENST00000592896.5	48071
ENST00000592298.5	alternative 5' UTR
ENST00000585377.5	alternative 5' UTR
ENST00000588124.1	alternative 5' UTR
ENST00000446085.8	NP_001189354.1
ENST00000603099.5	NMD likely if extended
ENST00000605301.5	NMD likely if extended
ENST00000605522.5	NMD likely if extended
ENST00000592912.5	alternative 5' UTR
ENST00000592904.6	upstream uORF
ENST00000588933.5	alternative 5' UTR
ENST00000590306.5	alternative 5' UTR
ENST00000651268.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000592292.5	alternative 5' UTR
ENST00000591213.1	alternative 5' UTR
ENST00000663347.1	Assembled from SLRseq reads (SRP049776)
ENST00000301480.5	MANE_select
ENST00000659036.1	Assembled from SLRseq reads (SRP049776)
ENST00000253115.7	MANE_select
ENST00000535489.5	alternative 5' UTR
ENST00000653468.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000320451.7	MANE_select
ENST00000591447.1	alternative 5' UTR
ENST00000302851.8	MANE_select
ENST00000302851.8	NP_689502.2
ENST00000421525.5	alternative 5' UTR
ENST00000435550.5	alternative 5' UTR
ENST00000652061.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000591932.6	Assembled from SLRseq reads (SRP049776)
ENST00000585797.5	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000585797.5	Assembled from SLRseq reads (SRP049776)
ENST00000587536.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000587536.6	Assembled from SLRseq reads (SRP049776)
ENST00000588765.5	Assembled from SLRseq reads (SRP049776)
ENST00000586614.6	Assembled from SLRseq reads (SRP049776)
ENST00000652787.1	Assembled from SLRseq reads (SRP049776)
ENST00000592851.5	alternative 3' UTR
ENST00000661696.1	Assembled from SLRseq reads (SRP049776)
ENST00000453372.7	MANE_select
ENST00000590155.5	NAGNAG splice site
ENST00000589542.1	alternative 5' UTR
ENST00000585350.1	alternative 5' UTR
ENST00000585964.1	alternative 5' UTR
ENST00000592859.1	alternative 5' UTR
ENST00000589412.5	alternative 5' UTR
ENST00000586814.5	alternative 5' UTR
ENST00000592587.1	alternative 5' UTR
ENST00000247977.9	MANE_select
ENST00000591009.1	alternative 5' UTR
ENST00000590277.1	alternative 5' UTR
ENST00000590068.1	alternative 5' UTR
ENST00000593087.1	non canonical TEC
ENST00000586895.6	MANE_select
ENST00000586895.6	alternative 5' UTR
ENST00000247970.9	MANE_select
ENST00000588695.5	alternative 3' UTR
ENST00000264828.4	MANE_select
ENST00000264828.4	NP_056534
ENST00000591589.3	MANE_select
ENST00000591589.3	upstream ATG
ENST00000592551.5	mRNA hits in 2 places, so 2 objects made
ENST00000253110.16	MANE_select
ENST00000590378.5	downstream ATG
ENST00000592641.5	alternative 5' UTR
ENST00000253107.12	MANE_select
ENST00000430370.1	alternative 5' UTR
ENST00000321826.5	MANE_select
ENST00000253108.9	MANE_select
ENST00000359526.9	MANE_select
ENST00000340748.8	upstream ATG
ENST00000588952.5	alternative 5' UTR
ENST00000592054.5	alternative 5' UTR
ENST00000646641.1	CAGE supported TSS
ENST00000646641.1	LR annotation
ENST00000646641.1	MANE_select
ENST00000592514.5	alternative 5' UTR
ENST00000253099.11	MANE_select
ENST00000264832.8	MANE_select
ENST00000380770.5	CAGE supported TSS
ENST00000380770.5	LR annotation
ENST00000380770.5	MANE_select
ENST00000221980.5	MANE_select
ENST00000586004.1	NMD likely if extended
ENST00000403903.7	NP_001096637
ENST00000393708.3	MANE_select
ENST00000393708.3	MGC19604
ENST00000393708.3	NP_001026904
ENST00000492239.5	alternative 5' UTR
ENST00000617231.5	CAGE supported TSS
ENST00000617231.5	MANE_select
ENST00000617231.5	NP_597709.2
ENST00000617231.5	upstream ATG
ENST00000585935.5	NMD likely if extended
ENST00000160262.10	MANE_select
ENST00000592439.1	not organism-supported
ENST00000589249.1	alternative 5' UTR
ENST00000589580.1	alternative 5' UTR
ENST00000525621.6	MANE_select
ENST00000531836.5	alternative 5' UTR
ENST00000222005.7	MANE_select
ENST00000380702.7	MANE_select
ENST00000171111.10	MANE_select
ENST00000393623.6	alternative 5' UTR
ENST00000588024.1	NMD likely if extended
ENST00000585845.1	not organism-supported
ENST00000592055.2	alternative 5' UTR
ENST00000591419.2	alternative 5' UTR
ENST00000591039.1	alternative 5' UTR
ENST00000333430.6	MANE_select
ENST00000590601.1	downstream ATG
ENST00000309469.9	MANE_select
ENST00000312962.12	MANE_select
ENST00000312962.12	upstream ATG
ENST00000432197.5	upstream ATG
ENST00000537964.5	NMD likely if extended
ENST00000393599.3	MANE_select
ENST00000250244.11	MANE_select
ENST00000588465.5	non canonical TEC
ENST00000335757.10	MANE_select
ENST00000586549.1	alternative 3' UTR
ENST00000589600.5	alternative 5' UTR
ENST00000589283.5	alternative 5' UTR
ENST00000590009.5	alternative 5' UTR
ENST00000593199.5	alternative 5' UTR
ENST00000592763.5	confirm experimentally
ENST00000250237.10	MANE_select
ENST00000585892.5	NAGNAG splice site
ENST00000389253.9	MANE_select
ENST00000214869.7	MANE_select
ENST00000591157.1	not organism-supported
ENST00000589638.1	not organism-supported
ENST00000592854.5	alternative 5' UTR
ENST00000397820.5	MANE_select
ENST00000327064.9	MANE_select
ENST00000344150.8	confirm experimentally
ENST00000586298.1	not organism-supported
ENST00000586748.6	MANE_select
ENST00000586748.6	alternative 5' UTR
ENST00000592646.5	alternative 3' UTR
ENST00000591872.1	alternative 3' UTR
ENST00000586575.5	alternative 5' UTR
ENST00000588347.5	alternative 5' UTR
ENST00000270502.7	MANE_select
ENST00000643549.1	NAGNAG splice site
ENST00000643549.1	non canonical conserved
ENST00000642726.1	NAGNAG splice site
ENST00000646484.1	NAGNAG splice site
ENST00000646484.1	alternative 5' UTR
ENST00000646693.1	NAGNAG splice site
ENST00000646693.1	NP_001122321.1
ENST00000644737.1	NAGNAG splice site
ENST00000644737.1	alternative 5' UTR
ENST00000644737.1	non canonical conserved
ENST00000642628.1	alternative 5' UTR
ENST00000643296.1	alternative 5' UTR
ENST00000643296.1	non canonical conserved
ENST00000647230.1	alternative 5' UTR
ENST00000429416.8	alternative 5' UTR
ENST00000644760.1	NAGNAG splice site
ENST00000644760.1	alternative 5' UTR
ENST00000344626.10	MANE_select
ENST00000645460.1	NAGNAG splice site
ENST00000645460.1	alternative 5' UTR
ENST00000541122.6	NAGNAG splice site
ENST00000541122.6	non canonical conserved
ENST00000589677.5	NAGNAG splice site
ENST00000589677.5	non canonical conserved
ENST00000444061.8	NAGNAG splice site
ENST00000590574.6	NAGNAG splice site
ENST00000643995.1	non canonical conserved
ENST00000644327.1	NAGNAG splice site
ENST00000644065.1	NAGNAG splice site
ENST00000644065.1	non canonical conserved
ENST00000644963.1	NAGNAG splice site
ENST00000644963.1	non canonical conserved
ENST00000643208.1	NAGNAG splice site
ENST00000642350.1	NAGNAG splice site
ENST00000642350.1	non canonical conserved
ENST00000644290.1	NAGNAG splice site
ENST00000647268.1	NAGNAG splice site
ENST00000643857.1	non canonical conserved
ENST00000646183.1	NAGNAG splice site
ENST00000646746.1	NAGNAG splice site
ENST00000643534.1	NAGNAG splice site
ENST00000646593.1	NAGNAG splice site
ENST00000646593.1	alternative 3' UTR
ENST00000592604.6	non canonical conserved
ENST00000585799.5	non canonical conserved
ENST00000642508.1	NAGNAG splice site
ENST00000645236.1	NAGNAG splice site
ENST00000538456.4	non canonical conserved
ENST00000592158.2	NAGNAG splice site
ENST00000643929.1	NAGNAG splice site
ENST00000455727.6	NP_001182729
ENST00000535915.5	NP_001182728
ENST00000545707.5	NP_001182732
ENST00000558518.6	MANE_select
ENST00000558013.5	NP_001182727
ENST00000586708.1	not organism-supported
ENST00000586659.6	MANE_select
ENST00000589894.1	confirm experimentally
ENST00000590685.5	alternative 5' UTR
ENST00000588724.5	alternative 5' UTR
ENST00000592903.5	alternative 5' UTR
ENST00000294618.12	MANE_select
ENST00000588666.1	not organism-supported
ENST00000252453.12	MANE_select
ENST00000316737.5	NP_036598.1
ENST00000590327.6	MANE_select
ENST00000586356.5	This variant has an 80 aa ORF starting of the second exon and finishing on the last exon
ENST00000585801.1	This variant has an 80 aa ORF starting of the second exon and finishing on the last exon
ENST00000222120.8	MANE_select
ENST00000589655.1	alternative 5' UTR
ENST00000354882.10	MANE_select
ENST00000354882.10	alternative 5' UTR
ENST00000586590.5	alternative 5' UTR
ENST00000586956.5	alternative 5' UTR
ENST00000589555.5	alternative 5' UTR
ENST00000587948.5	alternative 5' UTR
ENST00000588560.5	alternative 5' UTR
ENST00000586701.1	alternative 5' UTR
ENST00000590482.5	alternative 5' UTR
ENST00000591677.5	alternative 5' UTR
ENST00000590788.1	alternative 5' UTR
ENST00000458408.6	MANE_select
ENST00000458408.6	genebuild_only_MANE
ENST00000587531.5	alternative 5' UTR
ENST00000591329.5	alternative 5' UTR
ENST00000586380.5	alternative 5' UTR
ENST00000674460.1	MANE_select
ENST00000222139.11	MANE_select
ENST00000380456.8	MANE_select
ENST00000356392.9	MANE_select
ENST00000586836.5	upstream ATG
ENST00000676823.1	alternative 5' UTR
ENST00000591946.5	alternative 5' UTR
ENST00000589126.5	alternative 5' UTR
ENST00000587509.5	alternative 5' UTR
ENST00000591462.6	CAGE supported TSS
ENST00000677123.1	CAGE supported TSS
ENST00000677123.1	MANE_select
ENST00000593101.5	alternative 5' UTR
ENST00000587327.5	alternative 5' UTR
ENST00000359227.8	MANE_select
ENST00000585656.1	not organism-supported
ENST00000293771.10	MANE_select
ENST00000589051.1	not organism-supported
ENST00000270517.12	MANE_select
ENST00000591352.1	NMD likely if extended
ENST00000590480.1	alternative 5' UTR
ENST00000592665.1	alternative 5' UTR
ENST00000586149.1	alternative 5' UTR
ENST00000535659.6	alternative 5' UTR
ENST00000252456.7	MANE_select
ENST00000586059.5	alternative 5' UTR
ENST00000587806.5	downstream ATG
ENST00000589171.5	QC splicing correct
ENST00000589171.5	non canonical TEC
ENST00000591674.5	downstream ATG
ENST00000590700.5	alternative 5' UTR
ENST00000593077.1	alternative 5' UTR
ENST00000585493.5	alternative 5' UTR
ENST00000361113.10	MANE_select
ENST00000648477.1	LR annotation
ENST00000648477.1	MANE_select
ENST00000218758.9	alternative 5' UTR
ENST00000590420.1	non canonical TEC
ENST00000590832.1	alternative 5' UTR
ENST00000589792.5	alternative 5' UTR
ENST00000649386.1	alternative 5' UTR
ENST00000591319.1	alternative 5' UTR
ENST00000592828.6	alternative 5' UTR
ENST00000592659.1	alternative 5' UTR
ENST00000666937.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000341191.11	MANE_select
ENST00000357901.5	MANE_select
ENST00000357901.5	NP_689568.2
ENST00000323169.10	MANE_select
ENST00000304060.10	MANE_select
ENST00000429654.7	MANE_select
ENST00000254321.10	MANE_select
ENST00000358987.8	MANE_select
ENST00000652448.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000552904.5	alternative 5' UTR
ENST00000478765.5	alternative 5' UTR
ENST00000547560.5	alternative 5' UTR
ENST00000547628.2	MANE_select
ENST00000547628.2	confirm experimentally
ENST00000439326.8	MANE_select
ENST00000651606.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000480770.5	NMD likely if extended
ENST00000334213.10	MANE_select
ENST00000439556.3	MANE_select
ENST00000652580.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000343979.6	MANE_select
ENST00000355684.6	MANE_select
ENST00000293725.10	MANE_select
ENST00000430385.3	MANE_select
ENST00000301547.10	MANE_select
ENST00000397732.8	MANE_select
ENST00000339282.12	MANE_select
ENST00000311437.11	MANE_select
ENST00000343325.9	MANE_select
ENST00000456935.7	MANE_select
ENST00000596512.5	NMD likely if extended
ENST00000418543.8	MANE_select
ENST00000553179.5	alternative 3' UTR
ENST00000596731.7	CAGE supported TSS
ENST00000596731.7	MANE_select
ENST00000210060.12	MANE_select
ENST00000599481.1	NMD likely if extended
ENST00000640151.1	MANE_select
ENST00000393261.8	MANE_select
ENST00000356861.9	alternative 5' UTR
ENST00000450764.6	alternative 5' UTR
ENST00000450764.6	overlapping uORF
ENST00000589337.5	alternative 5' UTR
ENST00000590781.1	alternative 5' UTR
ENST00000242784.5	MANE_select
ENST00000242784.5	overlapping uORF
ENST00000591090.5	overlapping uORF
ENST00000357332.8	CAGE supported TSS
ENST00000357332.8	MANE_select
ENST00000357332.8	alternative 5' UTR
ENST00000549706.5	alternative 5' UTR
ENST00000553030.6	MANE_select
ENST00000678590.1	TB0000032-DNA_A01-LRAAD-01:Read_78124-Barcode%3DBC115:length%3D2125
ENST00000397668.8	CAGE supported TSS
ENST00000397668.8	MANE_select
ENST00000590839.5	alternative 5' UTR
ENST00000586719.5	upstream uORF
ENST00000587178.1	5' 350bp of this EST does not align to this, or any, locus of the reference human genome
ENST00000302754.6	MANE_select
ENST00000301522.3	MANE_select
ENST00000643364.1	NMD likely if extended
ENST00000643364.1	alternative 5' UTR
ENST00000221486.6	CAGE supported TSS
ENST00000221486.6	MANE_select
ENST00000589272.5	upstream uORF
ENST00000674343.2	MANE_select
ENST00000674343.2	upstream ATG
ENST00000458671.6	alternative 5' UTR
ENST00000586969.5	alternative 5' UTR
ENST00000589681.5	alternative 5' UTR
ENST00000589808.5	alternative 5' UTR
ENST00000590404.6	upstream ATG
ENST00000589567.2	alternative 5' UTR
ENST00000591512.2	alternative 5' UTR
ENST00000591512.2	overlapping uORF
ENST00000251472.9	MANE_select
ENST00000222219.8	MANE_select
ENST00000264834.6	MANE_select
ENST00000591470.5	alternative 5' UTR
ENST00000222214.10	MANE_select
ENST00000293695.8	MANE_select
ENST00000314606.9	MANE_select
ENST00000316448.10	MANE_select
ENST00000586967.2	align_id:3633266|asmbl_123431
ENST00000586967.2	alternative 3' UTR
ENST00000680816.1	align_id:3633268|asmbl_123433
ENST00000651137.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000586534.6	MANE_select
ENST00000316856.7	overlapping uORF
ENST00000316939.3	MANE_select
ENST00000585548.1	overlapping uORF
ENST00000317060.4	MANE_select
ENST00000317060.4	upstream ATG
ENST00000592199.6	CAGE supported TSS
ENST00000592199.6	MANE_select
ENST00000592199.6	confirm experimentally
ENST00000590027.1	alternative 5' UTR
ENST00000586797.5	overlapping uORF
ENST00000586873.1	overlapping uORF
ENST00000264824.5	MANE_select
ENST00000437766.5	CAGE supported TSS
ENST00000357720.9	CAGE supported TSS
ENST00000357720.9	MANE_select
ENST00000357720.9	alternative 5' UTR
ENST00000591425.5	NMD likely if extended
ENST00000592729.1	NMD likely if extended
ENST00000592892.1	NMD likely if extended
ENST00000586171.2	alternative 5' UTR
ENST00000292431.5	MANE_select
ENST00000292431.5	alternative 5' UTR
ENST00000343587.9	non canonical U12
ENST00000587230.6	MANE_select
ENST00000587230.6	non canonical U12
ENST00000587318.5	non canonical U12
ENST00000242770.9	non canonical U12
ENST00000589083.5	non canonical U12
ENST00000593126.5	non canonical U12
ENST00000440593.3	non canonical U12
ENST00000588848.5	alternative 5' UTR
ENST00000591197.1	alternative 5' UTR
ENST00000591197.1	non canonical U12
ENST00000292433.4	MANE_select
ENST00000292433.4	alternative 5' UTR
ENST00000587885.1	alternative 5' UTR
ENST00000588173.1	alternative 5' UTR
ENST00000656618.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000360228.11	MANE_select
ENST00000360228.11	non canonical U12
ENST00000638009.2	LR annotation
ENST00000638009.2	non canonical U12
ENST00000638009.2	non canonical conserved
ENST00000637769.1	non canonical U12
ENST00000637769.1	non canonical conserved
ENST00000635895.1	confirm experimentally
ENST00000635895.1	non canonical U12
ENST00000635895.1	non canonical conserved
ENST00000637736.1	non canonical conserved
ENST00000636389.1	non canonical U12
ENST00000636389.1	non canonical conserved
ENST00000637432.1	NP_000059.3
ENST00000637432.1	non canonical U12
ENST00000637432.1	non canonical conserved
ENST00000638029.1	NP_075461.2
ENST00000638029.1	non canonical U12
ENST00000638029.1	non canonical conserved
ENST00000635727.1	confirm experimentally
ENST00000635727.1	non canonical U12
ENST00000635727.1	non canonical conserved
ENST00000636012.1	confirm experimentally
ENST00000636012.1	non canonical U12
ENST00000636012.1	non canonical conserved
ENST00000573710.7	confirm experimentally
ENST00000573710.7	non canonical U12
ENST00000573710.7	non canonical conserved
ENST00000637276.1	confirm experimentally
ENST00000637276.1	non canonical U12
ENST00000637276.1	non canonical conserved
ENST00000637927.1	confirm experimentally
ENST00000637927.1	non canonical U12
ENST00000637927.1	non canonical conserved
ENST00000636549.1	NP_001167551.1
ENST00000636549.1	non canonical U12
ENST00000636549.1	non canonical conserved
ENST00000637777.1	alternative 3' UTR
ENST00000637966.1	non canonical U12
ENST00000637966.1	non canonical conserved
ENST00000636974.1	non canonical conserved
ENST00000636022.1	non canonical conserved
ENST00000593160.2	non canonical U12
ENST00000636966.1	non canonical U12
ENST00000637981.1	non canonical U12
ENST00000637616.1	non canonical U12
ENST00000586600.5	alternative 5' UTR
ENST00000586600.5	upstream uORF
ENST00000221554.13	MANE_select
ENST00000221554.13	alternative 5' UTR
ENST00000589669.1	upstream uORF
ENST00000040663.8	MANE_select
ENST00000588234.6	MANE_select
ENST00000586783.5	confirm experimentally
ENST00000318003.11	MANE_select
ENST00000318003.11	NAGNAG splice site
ENST00000589606.5	NAGNAG splice site
ENST00000588872.2	upstream ATG
ENST00000339560.10	upstream ATG
ENST00000254320.7	alternative 5' UTR
ENST00000254320.7	overlapping uORF
ENST00000538371.6	overlapping uORF
ENST00000586075.1	alternative 5' UTR
ENST00000587288.1	NMD likely if extended
ENST00000587458.1	alternative 5' UTR
ENST00000254325.9	MANE_select
ENST00000431365.3	CCDS12302.1
ENST00000431365.3	MANE_select
ENST00000263379.4	MANE_select
ENST00000589048.2	CAGE supported TSS
ENST00000589048.2	NP_001354256
ENST00000669674.2	MANE_select
ENST00000669674.2	NP_001138500
ENST00000587086.2	CAGE supported TSS
ENST00000548523.6	MANE_select
ENST00000548523.6	Partly Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000343945.5	not organism-supported
ENST00000547589.1	not organism-supported
ENST00000533683.7	confirm experimentally
ENST00000269724.5	not organism-supported
ENST00000677971.1	CHS.25881.7
ENST00000308677.9	MANE_select
ENST00000679067.1	align_id:3633479|asmbl_123644
ENST00000536649.5	upstream uORF
ENST00000678736.1	DC391460.1
ENST00000263382.8	MANE_select
ENST00000588387.2	Assembled from SLRseq reads (SRP049776)
ENST00000340736.10	overlapping uORF
ENST00000591528.1	NMD likely if extended
ENST00000661911.1	Assembled from SLRseq reads (SRP049776)
ENST00000358600.7	overlapping uORF
ENST00000242786.6	MANE_select
ENST00000242776.9	MANE_select
ENST00000590239.5	alternative 5' UTR
ENST00000586993.5	alternative 5' UTR
ENST00000593008.1	NMD likely if extended
ENST00000591275.5	alternative 5' UTR
ENST00000590696.1	alternative 5' UTR
ENST00000242783.11	MANE_select
ENST00000242783.11	isoform 2
ENST00000587429.1	NMD likely if extended
ENST00000342216.8	isoform 1
ENST00000292513.4	MANE_select
ENST00000393033.9	MANE_select
ENST00000345425.6	alternative 5' UTR
ENST00000586027.5	alternative 5' UTR
ENST00000591349.5	alternative 5' UTR
ENST00000587210.1	alternative 5' UTR
ENST00000587969.1	alternative 5' UTR
ENST00000587934.1	alternative 5' UTR
ENST00000591245.1	alternative 5' UTR
ENST00000676577.1	CAGE supported TSS
ENST00000254322.3	MANE_select
ENST00000596853.6	alternative 5' UTR
ENST00000678009.1	alternative 5' UTR
ENST00000596075.2	alternative 5' UTR
ENST00000594099.6	alternative 5' UTR
ENST00000676515.1	alternative 5' UTR
ENST00000598692.2	alternative 5' UTR
ENST00000598235.2	CAGE supported TSS
ENST00000598235.2	alternative 5' UTR
ENST00000678338.1	alternative 5' UTR
ENST00000677762.1	alternative 5' UTR
ENST00000677204.1	CAGE supported TSS
ENST00000677204.1	alternative 5' UTR
ENST00000601533.6	alternative 5' UTR
ENST00000679223.1	alternative 5' UTR
ENST00000676982.1	alternative 5' UTR
ENST00000678098.1	alternative 5' UTR
ENST00000396969.8	NP_001287843.1
ENST00000396969.8	Swiss-Prot isoform: P25685-2.4
ENST00000595992.6	alternative 5' UTR
ENST00000215567.10	MANE_select
ENST00000598333.5	alternative 3' UTR
ENST00000215565.3	MANE_select
ENST00000417570.6	MANE_select
ENST00000253673.6	MANE_select
ENST00000292530.11	MANE_select
ENST00000598161.1	not organism-supported
ENST00000315576.8	MANE_select
ENST00000641666.1	ENA ID EGAS00001001486
ENST00000641666.1	alternative 5' UTR
ENST00000642030.1	ENA ID EGAS00001001486
ENST00000642030.1	alternative 5' UTR
ENST00000642000.1	ENA ID EGAS00001001486
ENST00000642000.1	alternative 5' UTR
ENST00000601611.6	ENA ID EGAS00001001486
ENST00000322301.5	ENA ID EGAS00001001486
ENST00000322301.5	MANE_select
ENST00000322301.5	alternative 5' UTR
ENST00000641129.1	ENA ID EGAS00001001486
ENST00000641129.1	MANE_select
ENST00000641312.1	ENA ID EGAS00001001486
ENST00000642123.1	ENA ID EGAS00001001486
ENST00000642123.1	alternative 5' UTR
ENST00000641113.1	ENA ID EGAS00001001486
ENST00000641113.1	MANE_select
ENST00000641542.1	ENA ID EGAS00001001486
ENST00000641542.1	NCBI GEO ID GSE80249
ENST00000248072.3	MANE_select
ENST00000221742.7	alternative 5' UTR
ENST00000598504.5	alternative 5' UTR
ENST00000544886.6	alternative 5' UTR
ENST00000597262.1	NAGNAG splice site
ENST00000595863.1	alternative 5' UTR
ENST00000601761.1	alternative 5' UTR
ENST00000594383.1	alternative 5' UTR
ENST00000292574.4	MANE_select
ENST00000427043.4	MANE_select
ENST00000641398.1	MANE_select
ENST00000641398.1	NCBI GEO ID GSE80249
ENST00000641398.1	alternative 5' UTR
ENST00000342784.7	MANE_select
ENST00000263383.8	MANE_select
ENST00000527093.5	alternative 5' UTR
ENST00000533747.1	alternative 5' UTR
ENST00000263388.7	MANE_select
ENST00000221730.8	MANE_select
ENST00000221730.8	alternative 5' UTR
ENST00000594042.1	alternative 5' UTR
ENST00000263377.6	overlapping uORF
ENST00000679869.1	CAGE supported TSS
ENST00000679869.1	MANE_select
ENST00000594841.5	alternative 5' UTR
ENST00000601071.1	NMD likely if extended
ENST00000601941.1	alternative 5' UTR
ENST00000269701.7	CAGE supported TSS
ENST00000269701.7	MANE_select
ENST00000680199.1	align_id:3633729|asmbl_123894
ENST00000679798.1	align_id:3633716|asmbl_123881
ENST00000681018.1	align_id:3633715|asmbl_123880
ENST00000680245.1	align_id:3633717|asmbl_123882
ENST00000681812.1	align_id:3633727|asmbl_123892
ENST00000680336.1	align_id:3633726|asmbl_123891
ENST00000680461.1	CAGE supported TSS
ENST00000680461.1	align_id:3633718|asmbl_123883
ENST00000598597.7	align_id:3633721|asmbl_123886
ENST00000599883.2	align_id:3633737|asmbl_123902
ENST00000537303.5	CAGE supported TSS
ENST00000595416.1	CAGE supported TSS
ENST00000597164.2	CAGE supported TSS
ENST00000397410.10	CAGE supported TSS
ENST00000397410.10	MANE_select
ENST00000679638.1	align_id:3633695|asmbl_123860
ENST00000681170.1	align_id:3633698|asmbl_123863
ENST00000596213.6	align_id:3633694|asmbl_123859
ENST00000680649.1	align_id:3633693|asmbl_123858
ENST00000595879.6	align_id:3633702|asmbl_123867
ENST00000680703.1	align_id:3633706|asmbl_123871
ENST00000680017.1	align_id:3633707|asmbl_123872
ENST00000680363.1	align_id:3633733|asmbl_123898
ENST00000681405.1	align_id:3633722|asmbl_123887
ENST00000680957.1	align_id:3633723|asmbl_123888
ENST00000680865.1	align_id:3633720|asmbl_123885
ENST00000680303.1	NMD likely if extended
ENST00000680303.1	align_id:3633704|asmbl_123869
ENST00000679634.1	align_id:3633700|asmbl_123865
ENST00000681744.1	align_id:3633699|asmbl_123864
ENST00000680803.1	align_id:3633696|asmbl_123861
ENST00000681459.1	align_id:3633705|asmbl_123870
ENST00000680323.1	align_id:3633713|asmbl_123878
ENST00000680774.1	align_id:3633709|asmbl_123874
ENST00000680302.1	align_id:3633711|asmbl_123876
ENST00000680103.1	align_id:3633708|asmbl_123873
ENST00000680642.1	align_id:3633710|asmbl_123875
ENST00000595087.6	align_id:3633736|asmbl_123901
ENST00000600065.6	align_id:3633712|asmbl_123877
ENST00000674089.4	CAGE supported TSS
ENST00000674089.4	alternative 5' UTR
ENST00000263381.12	CAGE supported TSS
ENST00000673675.1	MANE_select
ENST00000599910.6	CAGE supported TSS
ENST00000599910.6	alternative 5' UTR
ENST00000596159.1	alternative 5' UTR
ENST00000602101.6	CAGE supported TSS
ENST00000343625.12	CAGE supported TSS
ENST00000343625.12	MANE_select
ENST00000292609.8	CAGE supported TSS
ENST00000340880.5	MANE_select
ENST00000601792.1	alternative 5' UTR
ENST00000594637.1	alternative 5' UTR
ENST00000269703.8	CAGE supported TSS
ENST00000269703.8	MANE_select
ENST00000617645.4	CAGE supported TSS
ENST00000617645.4	alternative 5' UTR
ENST00000441682.6	CAGE supported TSS
ENST00000325723.10	CAGE supported TSS
ENST00000612078.5	CAGE supported TSS
ENST00000612078.5	MANE_select
ENST00000590209.2	CAGE supported TSS
ENST00000622291.4	CAGE supported TSS
ENST00000586182.6	CAGE supported TSS
ENST00000586182.6	alternative 5' UTR
ENST00000221307.13	CAGE supported TSS
ENST00000221307.13	MANE_select
ENST00000591058.5	CAGE supported TSS
ENST00000591058.5	alternative 5' UTR
ENST00000587360.1	CAGE supported TSS
ENST00000585846.1	CAGE supported TSS
ENST00000585846.1	alternative 5' UTR
ENST00000547332.5	non canonical polymorphism
ENST00000547471.5	non canonical polymorphism
ENST00000451750.5	CAGE supported TSS
ENST00000430608.6	CAGE supported TSS
ENST00000548237.5	CAGE supported TSS
ENST00000518629.7	CAGE supported TSS
ENST00000518629.7	alternative 3' UTR
ENST00000518629.7	non canonical polymorphism
ENST00000548501.6	CAGE supported TSS
ENST00000548501.6	non canonical polymorphism
ENST00000549622.5	CAGE supported TSS
ENST00000548435.5	CAGE supported TSS
ENST00000548435.5	alternative 3' UTR
ENST00000548435.5	non canonical polymorphism
ENST00000550308.6	MANE_select
ENST00000546792.5	CAGE supported TSS
ENST00000546792.5	non canonical polymorphism
ENST00000550264.5	CAGE supported TSS
ENST00000517734.5	CAGE supported TSS
ENST00000517734.5	non canonical polymorphism
ENST00000324632.10	alternative 5' UTR
ENST00000305899.5	MANE_select
ENST00000641646.1	ENA ID EGAS00001001486
ENST00000641646.1	MANE_select
ENST00000642092.2	ENA ID EGAS00001001486
ENST00000642092.2	MANE_select
ENST00000642092.2	alternative 5' UTR
ENST00000641419.1	ENA ID EGAS00001001486
ENST00000641419.1	MANE_select
ENST00000641419.1	alternative 5' UTR
ENST00000667266.2	Merged with Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667266.2	Merged with TAGENE_transcript
ENST00000663214.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000644567.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000644174.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670862.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000645389.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655708.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658824.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000642256.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659568.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671188.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000644796.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655191.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000397381.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000645821.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000644845.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000645708.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665604.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666830.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000642440.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664784.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000392846.7	CAGE supported TSS
ENST00000221700.11	CAGE supported TSS
ENST00000221700.11	MANE_select
ENST00000587671.2	CAGE supported TSS
ENST00000586927.2	alternative 5' UTR
ENST00000608168.1	CAGE supported TSS
ENST00000248041.12	CAGE supported TSS
ENST00000248041.12	alternative 5' UTR
ENST00000402119.8	CAGE supported TSS
ENST00000402119.8	alternative 5' UTR
ENST00000641275.1	ENA ID EGAS00001001486
ENST00000322107.1	MANE_select
ENST00000664035.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659686.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654054.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654066.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666507.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661797.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656142.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662714.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668027.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662251.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659441.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658675.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665134.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664254.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671363.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669964.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662482.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654675.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662052.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658008.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657571.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658373.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000589071.4	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655400.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654208.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667744.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662860.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669042.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000588117.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654929.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662032.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669672.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662221.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000589897.1	alternative 5' UTR
ENST00000646974.2	CAGE supported TSS
ENST00000646974.2	LR annotation
ENST00000643579.2	CAGE supported TSS
ENST00000643579.2	LR annotation
ENST00000643579.2	MANE_select
ENST00000586833.7	CAGE supported TSS
ENST00000642221.1	CAGE supported TSS
ENST00000344824.11	CAGE supported TSS
ENST00000588483.2	alternative 5' UTR
ENST00000624324.1	confirm experimentally
ENST00000300935.8	MANE_select
ENST00000616645.4	alternative 5' UTR
ENST00000616645.4	upstream uORF
ENST00000613986.4	MANE_select
ENST00000591154.1	NAGNAG splice site
ENST00000269878.8	MANE_select
ENST00000597251.5	NAGNAG splice site
ENST00000263384.12	MANE_select
ENST00000668031.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000590263.5	alternative 5' UTR
ENST00000291439.8	MANE_select
ENST00000590945.5	alternative 5' UTR
ENST00000591775.5	alternative 5' UTR
ENST00000248071.6	MANE_select
ENST00000455140.7	MANE_select
ENST00000594975.5	upstream ATG
ENST00000593760.5	NAGNAG splice site
ENST00000623994.1	confirm experimentally
ENST00000269881.8	MANE_select
ENST00000221671.8	MANE_select
ENST00000599550.1	alternative 5' UTR
ENST00000594813.1	alternative 5' UTR
ENST00000601288.1	alternative 3' UTR
ENST00000546361.7	MANE_select
ENST00000198939.6	not organism-supported
ENST00000595753.6	MANE_select
ENST00000652421.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000263390.8	MANE_select
ENST00000611692.4	confirm experimentally
ENST00000611692.4	non canonical TEC
ENST00000598492.5	alternative 5' UTR
ENST00000625135.1	confirm experimentally
ENST00000487416.7	MANE_select
ENST00000187762.7	MANE_select
ENST00000524140.7	MANE_select
ENST00000673803.1	alternative 5' UTR
ENST00000673758.1	alternative 5' UTR
ENST00000646016.2	alternative 3' UTR
ENST00000552788.1	confirm experimentally
ENST00000248054.10	MANE_select
ENST00000248076.4	MANE_select
ENST00000599210.1	NAGNAG splice site
ENST00000443236.7	MANE_select
ENST00000443236.7	NP_056507
ENST00000443236.7	upstream ATG
ENST00000598792.1	NAGNAG splice site
ENST00000253669.10	MANE_select
ENST00000448593.6	NAGNAG splice site
ENST00000448593.6	NP_001011699
ENST00000595618.5	NP_001123537
ENST00000594824.5	NP_004136
ENST00000602177.1	NMD likely if extended
ENST00000596942.5	NAGNAG splice site
ENST00000263897.10	MANE_select
ENST00000215061.9	MANE_select
ENST00000291442.4	MANE_select
ENST00000596878.1	upstream ATG
ENST00000252597.8	MANE_select
ENST00000594190.5	alternative 5' UTR
ENST00000598309.1	alternative 5' UTR
ENST00000359435.8	alternative 5' UTR
ENST00000599474.5	alternative 5' UTR
ENST00000599057.5	NAGNAG splice site
ENST00000599057.5	alternative 5' UTR
ENST00000598188.6	MANE_select
ENST00000601043.5	alternative 5' UTR
ENST00000602066.5	alternative 5' UTR
ENST00000596542.1	NAGNAG splice site
ENST00000404261.9	upstream ATG
ENST00000652132.1	upstream ATG
ENST00000404085.7	MANE_select
ENST00000404085.7	upstream ATG
ENST00000598347.2	upstream ATG
ENST00000247706.4	MANE_select
ENST00000600434.5	alternative 5' UTR
ENST00000600434.5	upstream uORF
ENST00000594999.1	alternative 5' UTR
ENST00000252602.2	MANE_select
ENST00000359866.9	MANE_select
ENST00000159087.7	MANE_select
ENST00000361619.9	NP_001182351
ENST00000324894.13	MANE_select
ENST00000252590.9	MANE_select
ENST00000252593.7	MANE_select
ENST00000600514.5	alternative 5' UTR
ENST00000317040.12	MANE_select
ENST00000317040.12	gdr reviewed this and data support this is an overlapping locus, making the variants 13 and 14 as a separate locus - gdr 12/07/2012
ENST00000317040.12	potential upstream ATG but variants 13 + 14 fit criteria for non-coding RNA- by initial annotator
ENST00000341130.6	MANE_select
ENST00000341130.6	NP_001177773
ENST00000301944.3	MANE_select
ENST00000252595.12	MANE_select
ENST00000655024.1	Assembled from SLRseq reads (SRP049776)
ENST00000252603.7	MANE_select
ENST00000599164.6	MANE_select
ENST00000651880.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000252599.9	MANE_select
ENST00000550896.1	not organism-supported
ENST00000324096.9	MANE_select
ENST00000600209.5	alternative 5' UTR
ENST00000596309.5	alternative 5' UTR
ENST00000598539.5	alternative 5' UTR
ENST00000597474.5	alternative 5' UTR
ENST00000598067.5	alternative 5' UTR
ENST00000593833.5	alternative 5' UTR
ENST00000596536.5	alternative 5' UTR
ENST00000593870.5	alternative 5' UTR
ENST00000598086.5	alternative 5' UTR
ENST00000598932.5	NAGNAG splice site
ENST00000598932.5	alternative 5' UTR
ENST00000595023.5	alternative 5' UTR
ENST00000594068.5	alternative 5' UTR
ENST00000596507.5	alternative 5' UTR
ENST00000596462.5	NAGNAG splice site
ENST00000596462.5	alternative 5' UTR
ENST00000596865.5	alternative 5' UTR
ENST00000598960.5	alternative 5' UTR
ENST00000596951.5	alternative 5' UTR
ENST00000600777.1	alternative 5' UTR
ENST00000318683.7	MANE_select
ENST00000595387.1	alternative 5' UTR
ENST00000317306.8	CAGE supported TSS
ENST00000317306.8	LR annotation
ENST00000317306.8	MANE_select
ENST00000458235.7	MANE_select
ENST00000222247.10	MANE_select
ENST00000597648.5	alternative 5' UTR
ENST00000623214.1	confirm experimentally
ENST00000222248.4	MANE_select
ENST00000445755.7	MANE_select
ENST00000445755.7	alternative 5' UTR
ENST00000596123.1	alternative 5' UTR
ENST00000609922.1	CAGE supported TSS
ENST00000379656.7	CAGE supported TSS
ENST00000595712.5	CAGE supported TSS
ENST00000600788.6	CAGE supported TSS
ENST00000593560.6	CAGE supported TSS
ENST00000222250.5	CAGE supported TSS
ENST00000222250.5	MANE_select
ENST00000621646.1	CAGE supported TSS
ENST00000593993.7	CAGE supported TSS
ENST00000593993.7	MANE_select
ENST00000430026.7	CAGE supported TSS
ENST00000598019.6	alternative 5' UTR
ENST00000594176.1	alternative 5' UTR
ENST00000262811.10	CAGE supported TSS
ENST00000608648.1	CAGE supported TSS
ENST00000609076.1	NMD likely if extended
ENST00000222254.13	LR annotation
ENST00000222254.13	MANE_select
ENST00000617130.5	CHS.26064.6
ENST00000675271.1	align_id:1326926|asmbl_46829
ENST00000597802.2	alternative 5' UTR
ENST00000407280.4	MANE_select
ENST00000407280.4	alternative 5' UTR
ENST00000599612.3	MANE_select
ENST00000222256.9	MANE_select
ENST00000481914.2	alternative 5' UTR
ENST00000355502.7	overlapping uORF
ENST00000594617.7	alternative 5' UTR
ENST00000594465.7	alternative 5' UTR
ENST00000598111.7	CAGE supported TSS
ENST00000597297.1	CAGE supported TSS
ENST00000599754.1	alternative 5' UTR
ENST00000392413.5	MANE_select
ENST00000608950.1	alternative 5' UTR
ENST00000595654.6	alternative 5' UTR
ENST00000593659.5	alternative 5' UTR
ENST00000599528.1	alternative 5' UTR
ENST00000252818.5	MANE_select
ENST00000593829.6	MANE_select
ENST00000269919.11	MANE_select
ENST00000597765.1	alternative 5' UTR
ENST00000595973.2	alternative 5' UTR
ENST00000252809.3	MANE_select
ENST00000252809.3	alternative 5' UTR
ENST00000339007.4	MANE_select
ENST00000339007.4	alternative 5' UTR
ENST00000595840.1	alternative 5' UTR
ENST00000597724.6	CAGE supported TSS
ENST00000270061.12	MANE_select
ENST00000598159.6	NMD likely if extended
ENST00000602088.7	CAGE supported TSS
ENST00000599699.2	CAGE supported TSS
ENST00000582811.6	alternative 5' UTR
ENST00000338128.13	MANE_select
ENST00000457269.8	NP_001164409.1
ENST00000578963.5	CAGE supported TSS
ENST00000577820.5	alternative 5' UTR
ENST00000583534.1	alternative 5' UTR
ENST00000262809.9	MANE_select
ENST00000597960.7	NAGNAG splice site
ENST00000597960.7	alternative 5' UTR
ENST00000596558.6	NAGNAG splice site
ENST00000596558.6	alternative 5' UTR
ENST00000222308.8	NAGNAG splice site
ENST00000222308.8	alternative 5' UTR
ENST00000608443.6	MANE_select
ENST00000608443.6	NAGNAG splice site
ENST00000608443.6	alternative 5' UTR
ENST00000601844.5	NAGNAG splice site
ENST00000597611.7	NAGNAG splice site
ENST00000597611.7	alternative 5' UTR
ENST00000599540.6	NAGNAG splice site
ENST00000599540.6	alternative 5' UTR
ENST00000594844.5	alternative 5' UTR
ENST00000597547.1	alternative 5' UTR
ENST00000609656.1	alternative 5' UTR
ENST00000600372.5	alternative 5' UTR
ENST00000222307.9	MANE_select
ENST00000595073.5	alternative 3' UTR
ENST00000596785.5	alternative 5' UTR
ENST00000599319.5	alternative 5' UTR
ENST00000597438.5	alternative 5' UTR
ENST00000596244.1	alternative 5' UTR
ENST00000602094.5	alternative 5' UTR
ENST00000598830.5	alternative 5' UTR
ENST00000595870.5	alternative 5' UTR
ENST00000596304.5	alternative 5' UTR
ENST00000430157.6	alternative 5' UTR
ENST00000596273.5	alternative 5' UTR
ENST00000442744.7	MANE_select
ENST00000595683.5	alternative 5' UTR
ENST00000599256.5	alternative 5' UTR
ENST00000595158.5	alternative 5' UTR
ENST00000598780.5	alternative 5' UTR
ENST00000599551.5	alternative 5' UTR
ENST00000597451.5	alternative 5' UTR
ENST00000599595.5	alternative 3' UTR
ENST00000392386.8	MANE_select
ENST00000450195.6	NP_001093889.1
ENST00000358607.11	MANE_select
ENST00000600490.5	overlapping uORF
ENST00000262817.8	MANE_select
ENST00000262817.8	genebuild_only_MANE
ENST00000300976.9	MANE_select
ENST00000338797.10	non canonical U12
ENST00000321949.13	MANE_select
ENST00000321949.13	non canonical U12
ENST00000594658.5	non canonical U12
ENST00000222271.7	MANE_select
ENST00000262803.10	MANE_select
ENST00000247005.8	MANE_select
ENST00000623882.3	NMD exception
ENST00000262812.9	MANE_select
ENST00000349893.8	NP_955476.1
ENST00000629999.3	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000247003.9	MANE_select
ENST00000539827.5	alternative 5' UTR
ENST00000392351.8	MANE_select
ENST00000594439.5	NP_001139196.1
ENST00000542541.6	alternative 5' UTR
ENST00000596482.5	alternative 5' UTR
ENST00000600077.5	alternative 5' UTR
ENST00000599097.1	alternative 5' UTR
ENST00000601106.2	Assembled from SLRseq reads (SRP049776)
ENST00000452918.7	MANE_select
ENST00000452918.7	alternative 3' UTR
ENST00000337018.10	alternative 3' UTR
ENST00000337018.10	alternative 5' UTR
ENST00000337018.10	upstream uORF
ENST00000598202.1	NMD likely if extended
ENST00000594445.1	alternative 5' UTR
ENST00000537263.5	alternative 5' UTR
ENST00000540707.5	alternative 5' UTR
ENST00000535612.6	MANE_select
ENST00000541725.5	alternative 5' UTR
ENST00000541725.5	downstream ATG
ENST00000269932.10	alternative 5' UTR
ENST00000540792.5	alternative 5' UTR
ENST00000536098.5	alternative 5' UTR
ENST00000541898.5	alternative 5' UTR
ENST00000543877.1	downstream ATG
ENST00000535288.1	alternative 5' UTR
ENST00000538663.5	alternative 5' UTR
ENST00000392336.7	alternative 5' UTR
ENST00000392336.7	downstream ATG
ENST00000540634.2	alternative 3' UTR
ENST00000318596.8	MANE_select
ENST00000162044.14	MANE_select
ENST00000587096.5	alternative 5' UTR
ENST00000591031.6	,
ENST00000587915.1	alternative 5' UTR
ENST00000424583.7	CAGE supported TSS
ENST00000424583.7	MANE_select
ENST00000424583.7	NP_001139257.1
ENST00000409224.5	CAGE supported TSS
ENST00000410050.5	CAGE supported TSS
ENST00000409447.2	CAGE supported TSS
ENST00000602438.1	NMD likely if extended
ENST00000462790.8	MANE_select
ENST00000588208.6	alternative 3' UTR
ENST00000421262.7	alternative 5' UTR
ENST00000456252.7	NAGNAG splice site
ENST00000303088.9	MANE_select
ENST00000303088.9	NAGNAG splice site
ENST00000593273.5	NAGNAG splice site
ENST00000407360.7	NAGNAG splice site
ENST00000407360.7	alternative 5' UTR
ENST00000540981.5	NAGNAG splice site
ENST00000540981.5	alternative 5' UTR
ENST00000392324.8	NAGNAG splice site
ENST00000535017.1	NAGNAG splice site
ENST00000331552.12	MANE_select
ENST00000331552.12	non canonical U12
ENST00000420605.7	non canonical U12
ENST00000539693.1	non canonical U12
ENST00000252575.11	MANE_select
ENST00000291481.8	MANE_select
ENST00000389363.5	MANE_select
ENST00000586107.1	NMD likely if extended
ENST00000247001.10	CAGE supported TSS
ENST00000247001.10	MANE_select
ENST00000585763.5	NMD likely if extended
ENST00000606725.5	NMD likely if extended
ENST00000587716.7	NMD likely if extended
ENST00000262815.13	MANE_select
ENST00000494516.6	alternative 5' UTR
ENST00000609040.5	NAGNAG splice site
ENST00000417582.6	alternative 5' UTR
ENST00000457895.6	CAGE supported TSS
ENST00000457895.6	alternative 5' UTR
ENST00000448576.6	CAGE supported TSS
ENST00000432704.5	alternative 5' UTR
ENST00000404158.5	NAGNAG splice site
ENST00000404158.5	alternative 5' UTR
ENST00000429242.7	alternative 5' UTR
ENST00000358713.7	NAGNAG splice site
ENST00000444839.1	alternative 5' UTR
ENST00000418032.3	NAGNAG splice site
ENST00000585580.4	MANE_select
ENST00000507754.9	MANE_select
ENST00000507754.9	upstream ATG
ENST00000586674.1	NMD likely if extended
ENST00000514277.6	MANE_select
ENST00000291495.5	MANE_select
ENST00000251203.14	MANE_select
ENST00000407877.8	MANE_select
ENST00000407877.8	alternative 5' UTR
ENST00000542587.5	alternative 5' UTR
ENST00000542587.5	non canonical TEC
ENST00000591042.1	alternative 5' UTR
ENST00000588233.1	alternative 5' UTR
ENST00000592061.1	alternative 5' UTR
ENST00000588461.1	alternative 5' UTR
ENST00000588461.1	non canonical TEC
ENST00000203556.9	MANE_select
ENST00000586269.1	NMD likely if extended
ENST00000587205.1	not organism-supported
ENST00000357324.11	MANE_select
ENST00000592502.2	MANE_select
ENST00000344099.4	MANE_select
ENST00000651161.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000656660.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654130.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000540806.7	MANE_select
ENST00000589717.2	MANE_select
ENST00000343769.6	MANE_select
ENST00000397165.7	MANE_select
ENST00000601100.5	alternative 5' UTR
ENST00000474284.1	Exon 3 overlaps a ribosomal protein S16 (RPS16) Transcribed_processed_pseudogene annotated as OTTHUMG00000158058. The CDS of the pseudogene contains 9 substitutions, but is full length with no in-frame stop-codons or frame-shifts. However, the downstream splice junction would make this transcript a target for the nonsense mediated decay pathway
ENST00000418063.3	MANE_select
ENST00000418063.3	NP_009069.1
ENST00000657925.1	Assembled from SLRseq reads (SRP049776)
ENST00000670854.1	Assembled from SLRseq reads (SRP049776)
ENST00000497576.1	This pseudogene overlaps exon 3 of variant CTC-260E6.1-003 of a zinc finger protein 90 (ZNF90) annotated as OTTHUMG00000158057. The CDS of the pseudogene contains 9 substitutions, but is full length with no in-frame stop-codons or frame-shifts. However, the downstream splice junction would make this transcript a target for the nonsense mediated decay pathway
ENST00000335117.9	MANE_select
ENST00000653011.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427401.9	MANE_select
ENST00000595094.1	NMD likely if extended
ENST00000601440.6	MANE_select
ENST00000344519.10	MANE_select
ENST00000328178.13	MANE_select
ENST00000345030.6	confirm experimentally
ENST00000598862.5	alternative 5' UTR
ENST00000595742.1	alternative 5' UTR
ENST00000261560.10	MANE_select
ENST00000597424.1	alternative 5' UTR
ENST00000596367.1	downstream ATG
ENST00000311048.11	MANE_select
ENST00000356929.3	MANE_select
ENST00000392288.7	MANE_select
ENST00000600810.1	sequence error
ENST00000597444.6	Assembled from SLRseq reads (SRP049776)
ENST00000599993.6	Assembled from SLRseq reads (SRP049776)
ENST00000656526.1	Assembled from SLRseq reads (SRP049776)
ENST00000600469.6	Assembled from SLRseq reads (SRP049776)
ENST00000663704.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000358491.9	MANE_select
ENST00000358491.9	confirm experimentally
ENST00000662322.1	Assembled from SLRseq reads (SRP049776)
ENST00000657215.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000358296.11	MANE_select
ENST00000594401.1	alternative 5' UTR
ENST00000594012.1	alternative 5' UTR
ENST00000598381.1	alternative 5' UTR
ENST00000599906.1	alternative 5' UTR
ENST00000593551.1	alternative 5' UTR
ENST00000397126.9	MANE_select
ENST00000397126.9	NP_009084.2
ENST00000397126.9	confirm experimentally
ENST00000662217.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653321.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667750.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666067.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670493.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669253.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653701.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651236.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000670990.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658063.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652802.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651332.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000594947.6	MANE_select
ENST00000397121.3	MANE_select
ENST00000650058.1	not best-in-genome evidence
ENST00000651839.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000601693.2	MANE_select
ENST00000601693.2	NP_001229609.1
ENST00000601693.2	confirm experimentally
ENST00000357774.9	MANE_select
ENST00000652517.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000659982.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663718.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652384.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000660422.1	Assembled from SLRseq reads (SRP049776)
ENST00000456783.3	MANE_select
ENST00000596209.4	MANE_select
ENST00000596209.4	not best-in-genome evidence
ENST00000600766.3	MANE_select
ENST00000651654.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000594710.2	MANE_select
ENST00000594710.2	not best-in-genome evidence
ENST00000653078.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654102.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666832.1	Assembled from RACEseq reads
ENST00000658707.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658973.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658384.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657971.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658995.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671247.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664080.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655262.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663736.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664557.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000664557.1	Assembled from SLRseq reads (SRP049776)
ENST00000653153.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654127.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668302.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000593635.1	upstream ATG
ENST00000597761.7	MANE_select
ENST00000418100.6	MANE_select
ENST00000300619.12	MANE_select
ENST00000654756.1	Assembled from SLRseq reads (SRP049776)
ENST00000359788.9	MANE_select
ENST00000402377.3	FLJ16502
ENST00000402377.3	MANE_select
ENST00000402377.3	NP_612143
ENST00000658651.1	Assembled from SLRseq reads (SRP049776)
ENST00000525354.6	NP_001177758.1
ENST00000594466.6	MANE_select
ENST00000594466.6	not best-in-genome evidence
ENST00000598914.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000664647.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656993.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666101.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653003.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666488.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000594934.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654353.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654353.1	Assembled from SLRseq reads (SRP049776)
ENST00000662140.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668060.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669127.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660137.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658858.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670905.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652968.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654611.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652837.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654372.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654594.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664197.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671141.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659757.1	Assembled from SLRseq reads (SRP049776)
ENST00000653308.1	Assembled from SLRseq reads (SRP049776)
ENST00000661386.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668656.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656966.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663903.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662903.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663458.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668169.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665638.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670058.1	Assembled from SLRseq reads (SRP049776)
ENST00000668701.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655664.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666861.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664627.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661650.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667700.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000357002.5	MANE_select
ENST00000666409.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671282.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667518.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665996.1	Assembled from SLRseq reads (SRP049776)
ENST00000666003.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655465.1	Assembled from SLRseq reads (SRP049776)
ENST00000662444.1	Assembled from SLRseq reads (SRP049776)
ENST00000662487.1	Assembled from SLRseq reads (SRP049776)
ENST00000670572.1	Assembled from SLRseq reads (SRP049776)
ENST00000666658.1	Assembled from SLRseq reads (SRP049776)
ENST00000658694.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000656086.1	Assembled from SLRseq reads (SRP049776)
ENST00000658434.1	Assembled from SLRseq reads (SRP049776)
ENST00000663775.1	Assembled from SLRseq reads (SRP049776)
ENST00000656191.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656191.1	Assembled from SLRseq reads (SRP049776)
ENST00000654098.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654098.1	Assembled from SLRseq reads (SRP049776)
ENST00000659785.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659785.1	Assembled from SLRseq reads (SRP049776)
ENST00000664720.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667396.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653317.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665102.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665102.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000590677.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654565.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000655166.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656647.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000668933.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668933.1	Assembled from SLRseq reads (SRP049776)
ENST00000664383.1	Assembled from SLRseq reads (SRP049776)
ENST00000659995.1	Assembled from SLRseq reads (SRP049776)
ENST00000657677.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657677.1	Assembled from SLRseq reads (SRP049776)
ENST00000654443.1	Assembled from SLRseq reads (SRP049776)
ENST00000653471.1	Assembled from SLRseq reads (SRP049776)
ENST00000654151.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659922.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668560.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657730.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659734.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664688.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661680.1	Assembled from SLRseq reads (SRP049776)
ENST00000668513.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668513.1	Assembled from SLRseq reads (SRP049776)
ENST00000670305.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671152.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665874.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665874.1	Assembled from SLRseq reads (SRP049776)
ENST00000660820.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670973.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656170.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669191.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657659.1	Assembled from SLRseq reads (SRP049776)
ENST00000666734.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666734.1	Assembled from SLRseq reads (SRP049776)
ENST00000668068.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655567.1	Assembled from SLRseq reads (SRP049776)
ENST00000655066.1	Assembled from SLRseq reads (SRP049776)
ENST00000653459.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664444.1	Assembled from SLRseq reads (SRP049776)
ENST00000666841.1	Assembled from SLRseq reads (SRP049776)
ENST00000671227.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656728.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654892.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664204.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656221.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000591338.2	Assembled from SLRseq reads (SRP049776)
ENST00000658794.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667678.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663492.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656708.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658654.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659364.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659422.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659422.1	Assembled from SLRseq reads (SRP049776)
ENST00000660418.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000590523.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653404.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664921.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000585917.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000585917.6	Assembled from SLRseq reads (SRP049776)
ENST00000666789.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653426.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667196.1	Assembled from SLRseq reads (SRP049776)
ENST00000655543.1	Assembled from SLRseq reads (SRP049776)
ENST00000670399.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000592404.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668414.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659857.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667566.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000656827.1	Assembled from SLRseq reads (SRP049776)
ENST00000669503.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668186.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669909.1	Assembled from SLRseq reads (SRP049776)
ENST00000586220.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664065.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661017.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668903.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668903.1	Assembled from SLRseq reads (SRP049776)
ENST00000669826.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000587188.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660309.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663452.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669145.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000590229.1	NAGNAG splice site
ENST00000651559.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000656648.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000662278.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669752.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657984.1	Assembled from SLRseq reads (SRP049776)
ENST00000660056.1	Assembled from SLRseq reads (SRP049776)
ENST00000651179.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000587998.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664775.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659282.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659282.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000589466.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667314.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660607.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657694.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663381.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669456.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000585813.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654199.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664282.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670182.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670624.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000592653.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663054.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000591143.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000591143.6	Assembled from SLRseq reads (SRP049776)
ENST00000659147.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668941.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667583.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661114.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656059.1	Assembled from SLRseq reads (SRP049776)
ENST00000656834.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000304863.6	MANE_select
ENST00000590607.2	Assembled from SLRseq reads (SRP049776)
ENST00000657623.1	Assembled from SLRseq reads (SRP049776)
ENST00000663300.1	Assembled from SLRseq reads (SRP049776)
ENST00000660387.1	Assembled from SLRseq reads (SRP049776)
ENST00000664318.1	Assembled from SLRseq reads (SRP049776)
ENST00000591061.5	non canonical TEC
ENST00000585603.6	MANE_select
ENST00000592810.1	alternative 5' UTR
ENST00000436066.4	MANE_select
ENST00000588833.1	alternative 5' UTR
ENST00000586888.1	alternative 5' UTR
ENST00000323670.14	MANE_select
ENST00000666573.1	Assembled from SLRseq reads (SRP049776)
ENST00000262643.8	MANE_select
ENST00000657512.1	Assembled from SLRseq reads (SRP049776)
ENST00000570564.5	alternative 5' UTR
ENST00000574233.5	alternative 5' UTR
ENST00000392271.6	MANE_select
ENST00000655808.1	Assembled from SLRseq reads (SRP049776)
ENST00000659771.1	Assembled from SLRseq reads (SRP049776)
ENST00000660929.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000585628.5	alternative 5' UTR
ENST00000591488.1	alternative 5' UTR
ENST00000355537.4	MANE_select
ENST00000240587.5	MANE_select
ENST00000660210.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660315.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655851.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655296.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671470.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658988.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666238.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654096.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659241.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667120.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658745.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661073.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670562.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670066.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659731.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664841.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663546.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655260.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669039.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662746.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653649.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656632.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662101.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654237.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000655929.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661219.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667193.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654554.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000592788.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660379.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664476.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667398.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667366.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655900.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658409.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000590611.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661721.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660114.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664056.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671569.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661861.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662874.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660488.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660671.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660019.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663580.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660672.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663440.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670699.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670796.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662416.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669372.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659937.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655256.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653197.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657612.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659249.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656165.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663079.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652929.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654669.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657281.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670492.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657538.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656066.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666639.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654314.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656360.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663136.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660926.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653579.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654437.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658221.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666081.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669478.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663104.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662070.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000588694.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000593056.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652115.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000666300.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656139.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661915.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662548.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663477.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656347.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660670.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000590719.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657008.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670050.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657853.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671052.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000592668.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651770.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000355898.6	MANE_select
ENST00000355898.6	alternative 5' UTR
ENST00000392250.7	MANE_select
ENST00000392250.7	genebuild_only_MANE
ENST00000590247.7	MANE_select
ENST00000306065.9	MANE_select
ENST00000586693.7	NAGNAG splice site
ENST00000590519.2	alternative 5' UTR
ENST00000334176.4	MANE_select
ENST00000590341.5	alternative 5' UTR
ENST00000023064.9	MANE_select
ENST00000587772.1	alternative 5' UTR
ENST00000305768.10	MANE_select
ENST00000588258.6	MANE_select
ENST00000590179.1	alternative 5' UTR
ENST00000590281.1	alternative 5' UTR
ENST00000254260.8	MANE_select
ENST00000170564.7	MANE_select
ENST00000592765.5	NMD likely if extended
ENST00000361680.6	NMD exception
ENST00000355868.4	MANE_select
ENST00000253193.9	MANE_select
ENST00000253188.8	MANE_select
ENST00000658148.1	Assembled from SLRseq reads (SRP049776)
ENST00000668860.1	Assembled from SLRseq reads (SRP049776)
ENST00000498907.3	MANE_select
ENST00000652630.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000652630.1	non canonical U12
ENST00000284000.9	MANE_select
ENST00000585933.2	alternative 5' UTR
ENST00000244137.12	CAGE supported TSS
ENST00000244137.12	LR annotation
ENST00000244137.12	MANE_select
ENST00000650847.1	MANE_select
ENST00000650847.1	genebuild_only_MANE
ENST00000591231.5	alternative 5' UTR
ENST00000262622.4	alternative 5' UTR
ENST00000587658.5	alternative 5' UTR
ENST00000587559.5	alternative 5' UTR
ENST00000588637.5	alternative 5' UTR
ENST00000590771.5	alternative 5' UTR
ENST00000588881.5	alternative 5' UTR
ENST00000590906.5	alternative 5' UTR
ENST00000430256.3	alternative 5' UTR
ENST00000657364.1	Assembled from SLRseq reads (SRP049776)
ENST00000544216.8	MANE_select
ENST00000299505.8	MANE_select
ENST00000589583.5	alternative 5' UTR
ENST00000587521.7	alternative 5' UTR
ENST00000587384.6	alternative 5' UTR
ENST00000592277.5	alternative 5' UTR
ENST00000642240.1	alternative 5' UTR
ENST00000590375.5	alternative 5' UTR
ENST00000356487.11	CAGE supported TSS
ENST00000356487.11	LR annotation
ENST00000356487.11	MANE_select
ENST00000606020.1	CAGE supported TSS
ENST00000246535.4	MANE_select
ENST00000587065.2	CAGE supported TSS
ENST00000246548.9	MANE_select
ENST00000439527.6	CAGE supported TSS
ENST00000592791.1	CAGE supported TSS
ENST00000590071.7	MANE_select
ENST00000502743.5	alternative 5' UTR
ENST00000506901.5	alternative 5' UTR
ENST00000505163.5	alternative 5' UTR
ENST00000505242.6	MANE_select
ENST00000505242.6	alternative 5' UTR
ENST00000423823.6	alternative 5' UTR
ENST00000507959.5	NAGNAG splice site
ENST00000507959.5	alternative 5' UTR
ENST00000505365.2	alternative 5' UTR
ENST00000599244.5	NAGNAG splice site
ENST00000599244.5	alternative 5' UTR
ENST00000392232.7	NAGNAG splice site
ENST00000492450.3	MANE_select
ENST00000492450.3	NAGNAG splice site
ENST00000595708.5	NAGNAG splice site
ENST00000595708.5	alternative 5' UTR
ENST00000459757.6	NAGNAG splice site
ENST00000329285.13	MANE_select
ENST00000673678.1	non canonical polymorphism
ENST00000673783.1	alternative 3' UTR
ENST00000673783.1	non canonical polymorphism
ENST00000587150.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654750.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657681.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659696.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665910.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670999.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656274.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668481.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668481.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000601776.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668799.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656044.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661037.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668999.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666368.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669819.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657506.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655389.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653487.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661859.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665881.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657568.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000603718.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653476.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657508.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658624.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668349.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000657878.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000604453.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662155.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667778.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000605047.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651304.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000667951.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659576.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000603717.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665539.1	Assembled from SLRseq reads (SRP049776)
ENST00000303586.11	NAGNAG splice site
ENST00000601142.2	MANE_select
ENST00000601142.2	NAGNAG splice site
ENST00000601540.5	NAGNAG splice site
ENST00000601540.5	alternative 5' UTR
ENST00000601957.5	NAGNAG splice site
ENST00000601957.5	NMD exception
ENST00000404801.2	MANE_select
ENST00000317991.10	CAGE supported TSS
ENST00000317991.10	MANE_select
ENST00000598073.5	alternative 5' UTR
ENST00000262631.11	CAGE supported TSS
ENST00000262631.11	LR annotation
ENST00000262631.11	MANE_select
ENST00000638536.1	alternative 3' UTR
ENST00000640135.1	CAGE supported TSS
ENST00000596348.2	CAGE supported TSS
ENST00000675741.1	prediction only
ENST00000672452.2	MANE_select
ENST00000600390.1	alternative 5' UTR
ENST00000666194.1	Assembled from SLRseq reads (SRP049776)
ENST00000653822.1	Assembled from SLRseq reads (SRP049776)
ENST00000668923.1	Assembled from SLRseq reads (SRP049776)
ENST00000616460.2	confirm experimentally
ENST00000648240.1	alternative 5' UTR
ENST00000603181.5	alternative 5' UTR
ENST00000603181.5	upstream ATG
ENST00000604255.5	NP_001129479
ENST00000603449.5	alternative 5' UTR
ENST00000605552.5	NP_001129481
ENST00000603524.5	alternative 5' UTR
ENST00000604621.5	alternative 5' UTR
ENST00000310123.8	MANE_select
ENST00000351325.9	MANE_select
ENST00000589209.5	alternative 5' UTR
ENST00000455515.6	alternative 5' UTR
ENST00000588715.5	alternative 5' UTR
ENST00000588607.5	alternative 5' UTR
ENST00000588607.5	upstream ATG
ENST00000588081.5	alternative 3' UTR
ENST00000588081.5	upstream ATG
ENST00000270310.7	MANE_select
ENST00000392219.7	MANE_select
ENST00000541435.6	alternative 5' UTR
ENST00000590686.5	alternative 5' UTR
ENST00000588699.5	alternative 3' UTR
ENST00000588699.5	alternative 5' UTR
ENST00000423817.7	alternative 5' UTR
ENST00000597933.5	alternative 5' UTR
ENST00000602122.5	NAGNAG splice site
ENST00000354900.7	NAGNAG splice site
ENST00000354900.7	NP_057009
ENST00000605618.6	CAGE supported TSS
ENST00000605618.6	MANE_select
ENST00000601623.5	alternative 5' UTR
ENST00000222305.8	MANE_select
ENST00000598398.5	alternative 5' UTR
ENST00000222304.5	MANE_select
ENST00000600291.5	alternative 5' UTR
ENST00000595791.5	alternative 5' UTR
ENST00000597035.5	NMD likely if extended
ENST00000392213.8	MANE_select
ENST00000598537.5	alternative 5' UTR
ENST00000600131.5	alternative 5' UTR
ENST00000600131.5	upstream ATG
ENST00000595780.5	alternative 5' UTR
ENST00000597916.5	alternative 5' UTR
ENST00000593867.5	alternative 5' UTR
ENST00000085219.10	MANE_select
ENST00000327809.5	MANE_select
ENST00000594310.1	alternative 5' UTR
ENST00000454971.2	not best-in-genome evidence
ENST00000597214.1	alternative 5' UTR
ENST00000599180.3	MANE_select
ENST00000338897.4	MANE_select
ENST00000339686.8	MANE_select
ENST00000472252.6	CAGE supported TSS
ENST00000492341.6	CAGE supported TSS
ENST00000466587.6	NMD likely if extended
ENST00000602679.5	CAGE supported TSS
ENST00000447113.6	confirm experimentally
ENST00000451297.6	confirm experimentally
ENST00000452271.7	MANE_select
ENST00000222286.9	MANE_select
ENST00000590717.2	Assembled from SLRseq reads (SRP049776)
ENST00000444728.2	Partly Assembled from SLRseq reads (ENA:SRP049776)
ENST00000660248.1	Assembled from SLRseq reads (SRP049776)
ENST00000670097.1	Assembled from SLRseq reads (SRP049776)
ENST00000667891.1	Assembled from SLRseq reads (SRP049776)
ENST00000660839.1	Assembled from SLRseq reads (SRP049776)
ENST00000590125.2	Assembled from SLRseq reads (SRP049776)
ENST00000654809.1	Assembled from SLRseq reads (SRP049776)
ENST00000222284.10	MANE_select
ENST00000222284.10	seven transmembrane domain protein (NIFIE14)
ENST00000262623.4	MANE_select
ENST00000669392.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656011.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660835.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659371.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657962.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665580.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661919.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657146.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655429.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667472.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000453968.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000203166.10	MANE_select
ENST00000262633.9	MANE_select
ENST00000402764.6	MANE_select
ENST00000402764.6	genebuild_only_MANE
ENST00000403402.1	confirm experimentally
ENST00000649813.2	CAGE supported TSS
ENST00000649813.2	LR annotation
ENST00000649813.2	MANE_select
ENST00000592141.6	alternative 5' UTR
ENST00000592141.6	upstream ATG
ENST00000392201.1	alternative 5' UTR
ENST00000652250.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000392197.7	MANE_select
ENST00000392197.7	TESTIS ZINC FINGER PROTEIN
ENST00000481182.1	Novel protein similar to testis zinc finger protein, clone MGC:21109
ENST00000420124.4	MANE_select
ENST00000606995.2	NMD likely if extended
ENST00000606995.2	confirm experimentally
ENST00000246532.6	MANE_select
ENST00000586140.1	alternative 5' UTR
ENST00000378975.8	MANE_select
ENST00000222266.2	alternative 5' UTR
ENST00000587708.7	MANE_select
ENST00000591613.2	non canonical conserved
ENST00000591076.1	NMD likely if extended
ENST00000301159.14	MANE_select
ENST00000004982.6	MANE_select
ENST00000592984.6	alternative 5' UTR
ENST00000592984.6	novel protein similar to heat shock 20kDa like-protein (FLJ32389)
ENST00000444637.6	NAGNAG splice site
ENST00000301165.9	NAGNAG splice site
ENST00000536950.5	NAGNAG splice site
ENST00000620918.4	NAGNAG splice site
ENST00000537459.5	NAGNAG splice site
ENST00000421853.6	NAGNAG splice site
ENST00000545674.5	NAGNAG splice site
ENST00000545674.5	alternative 5' UTR
ENST00000539771.1	NAGNAG splice site
ENST00000591438.1	alternative 5' UTR
ENST00000433059.1	CAGE supported TSS
ENST00000653904.2	CAGE supported TSS
ENST00000653904.2	MANE_select
ENST00000378910.10	CAGE supported TSS
ENST00000378910.10	MANE_select
ENST00000353632.6	confirm experimentally
ENST00000586102.7	alternative 5' UTR
ENST00000360202.10	MANE_select
ENST00000221891.9	MANE_select
ENST00000652533.1	NAGNAG splice site
ENST00000652533.1	NP_005157.1
ENST00000589743.5	alternative 5' UTR
ENST00000246551.9	MANE_select
ENST00000246551.9	NP_055081.1
ENST00000544690.6	NP_001166985
ENST00000262629.9	MANE_select
ENST00000246529.4	MANE_select
ENST00000378887.4	MANE_select
ENST00000324444.9	CAGE supported TSS
ENST00000324444.9	LR annotation
ENST00000324444.9	MANE_select
ENST00000360535.9	MANE_select
ENST00000593074.5	alternative 5' UTR
ENST00000592017.5	alternative 5' UTR
ENST00000590559.2	alternative 5' UTR
ENST00000292894.2	MANE_select
ENST00000401500.7	MANE_select
ENST00000680806.1	alternative 3' UTR
ENST00000270301.12	confirm experimentally
ENST00000680211.1	CAGE supported TSS
ENST00000633214.1	confirm experimentally
ENST00000221859.9	MANE_select
ENST00000221855.8	MANE_select
ENST00000651435.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000588385.5	alternative 5' UTR
ENST00000246533.8	MANE_select
ENST00000592483.5	alternative 5' UTR
ENST00000588815.5	alternative 5' UTR
ENST00000591041.5	alternative 5' UTR
ENST00000588780.5	alternative 5' UTR
ENST00000292907.8	MANE_select
ENST00000304116.10	MANE_select
ENST00000304116.10	alternative 5' UTR
ENST00000585994.1	alternative 5' UTR
ENST00000443387.3	MANE_select
ENST00000666182.2	Assembled from SLRseq reads (SRP049776)
ENST00000449434.7	Assembled from SLRseq reads (SRP049776)
ENST00000658126.2	Assembled from SLRseq reads (SRP049776)
ENST00000668927.1	Assembled from SLRseq reads (SRP049776)
ENST00000658042.1	Assembled from SLRseq reads (SRP049776)
ENST00000665982.1	Assembled from SLRseq reads (SRP049776)
ENST00000659786.2	Assembled from SLRseq reads (SRP049776)
ENST00000590622.5	CAGE supported TSS
ENST00000651681.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651681.2	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000591372.2	Assembled from SLRseq reads (SRP049776)
ENST00000658301.1	Assembled from SLRseq reads (SRP049776)
ENST00000662398.1	Assembled from SLRseq reads (SRP049776)
ENST00000667829.1	Assembled from SLRseq reads (SRP049776)
ENST00000656137.1	Assembled from SLRseq reads (SRP049776)
ENST00000666458.1	Assembled from SLRseq reads (SRP049776)
ENST00000667789.1	Assembled from SLRseq reads (SRP049776)
ENST00000658991.1	Assembled from SLRseq reads (SRP049776)
ENST00000668768.1	Assembled from SLRseq reads (SRP049776)
ENST00000661195.1	Assembled from SLRseq reads (SRP049776)
ENST00000586345.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000586488.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660925.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655331.1	Assembled from SLRseq reads (SRP049776)
ENST00000660190.2	Extended using Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670370.1	Assembled from SLRseq reads (SRP049776)
ENST00000657631.1	Assembled from SLRseq reads (SRP049776)
ENST00000270001.12	MANE_select
ENST00000392161.4	MANE_select
ENST00000392170.6	NP_001138815.1
ENST00000452939.5	alternative 5' UTR
ENST00000427002.1	alternative 5' UTR
ENST00000523638.6	MANE_select
ENST00000592282.1	alternative 5' UTR
ENST00000588993.1	alternative 5' UTR
ENST00000593142.5	alternative 5' UTR
ENST00000591340.6	MANE_select
ENST00000585983.5	alternative 5' UTR
ENST00000670019.1	Assembled from SLRseq reads (SRP049776)
ENST00000670806.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000460670.5	alternative 5' UTR
ENST00000292928.7	MANE_select
ENST00000588268.6	MANE_select
ENST00000665321.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665321.1	Assembled from SLRseq reads (SRP049776)
ENST00000425254.3	Assembled from SLRseq reads (SRP049776)
ENST00000585696.5	alternative 5' UTR
ENST00000591344.2	MANE_select
ENST00000665759.1	Assembled from SLRseq reads (SRP049776)
ENST00000663625.1	Assembled from SLRseq reads (SRP049776)
ENST00000657461.1	Assembled from SLRseq reads (SRP049776)
ENST00000589556.2	Assembled from SLRseq reads (SRP049776)
ENST00000650959.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000587413.6	Assembled from SLRseq reads (SRP049776)
ENST00000655476.1	Assembled from SLRseq reads (SRP049776)
ENST00000663523.1	Assembled from SLRseq reads (SRP049776)
ENST00000665341.1	Assembled from SLRseq reads (SRP049776)
ENST00000356725.9	MANE_select
ENST00000528994.5	alternative 5' UTR
ENST00000586323.5	alternative 5' UTR
ENST00000525288.5	alternative 5' UTR
ENST00000527645.1	alternative 5' UTR
ENST00000589046.1	alternative 5' UTR
ENST00000420450.6	MANE_select
ENST00000532141.5	alternative 5' UTR
ENST00000529555.1	alternative 5' UTR
ENST00000331800.8	alternative 5' UTR
ENST00000586646.1	alternative 5' UTR
ENST00000585396.1	alternative 5' UTR
ENST00000520965.5	NP_001165450.1
ENST00000391711.8	MANE_select
ENST00000333987.12	MANE_select
ENST00000587130.5	alternative 5' UTR
ENST00000455427.6	NP_001191768.1
ENST00000587029.5	alternative 5' UTR
ENST00000337995.4	MANE_select
ENST00000589245.5	alternative 5' UTR
ENST00000292841.10	MANE_select
ENST00000392157.2	NP_954577.1
ENST00000532828.7	MANE_select
ENST00000590503.5	alternative 5' UTR
ENST00000589413.5	alternative 5' UTR
ENST00000588371.1	alternative 5' UTR
ENST00000652687.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000586324.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656668.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653146.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654113.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666838.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664190.1	Assembled from SLRseq reads (SRP049776)
ENST00000659928.1	Assembled from SLRseq reads (SRP049776)
ENST00000659822.1	Assembled from SLRseq reads (SRP049776)
ENST00000666743.1	Assembled from SLRseq reads (SRP049776)
ENST00000668926.1	Assembled from SLRseq reads (SRP049776)
ENST00000652615.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000589801.1	alternative 5' UTR
ENST00000590386.5	NMD likely if extended
ENST00000589392.5	NAGNAG splice site
ENST00000436120.7	MANE_select
ENST00000356178.8	gene for novel protein, KIAA1829
ENST00000392149.6	alternative 5' UTR
ENST00000316950.11	MANE_select
ENST00000448051.7	Partly Assembled from SLRseq reads (ENA:SRP049776)
ENST00000591073.1	NMD likely if extended
ENST00000330173.6	MANE_select
ENST00000589725.1	alternative 5' UTR
ENST00000589025.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000585890.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000627814.3	MANE_select
ENST00000627814.3	alternative 5' UTR
ENST00000587143.5	NP_001013681.2
ENST00000586138.5	alternative 5' UTR
ENST00000668693.1	Assembled from SLRseq reads (SRP049776)
ENST00000592533.5	alternative 5' UTR
ENST00000316433.9	MANE_select
ENST00000586134.5	alternative 5' UTR
ENST00000343599.5	alternative 5' UTR
ENST00000593133.5	alternative 5' UTR
ENST00000451802.7	MANE_select
ENST00000358744.3	alternative 5' UTR
ENST00000514101.6	alternative 5' UTR
ENST00000587809.5	alternative 5' UTR
ENST00000588979.5	alternative 5' UTR
ENST00000587199.5	alternative 5' UTR
ENST00000591444.1	alternative 5' UTR
ENST00000358582.9	MANE_select
ENST00000590008.5	alternative 5' UTR
ENST00000355202.9	MANE_select
ENST00000395835.7	NAGNAG splice site
ENST00000395835.7	NP_001166148.1
ENST00000658143.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000536220.7	MANE_select
ENST00000494605.2	NMD likely if extended
ENST00000447313.7	MANE_select
ENST00000222345.11	MANE_select
ENST00000601054.1	CAGE supported TSS
ENST00000420980.7	NP_004638.2
ENST00000420980.7	upstream ATG
ENST00000355526.9	upstream ATG
ENST00000438060.5	alternative 5' UTR
ENST00000438365.5	alternative 5' UTR
ENST00000586624.1	alternative 5' UTR
ENST00000590510.5	alternative 5' UTR
ENST00000301244.12	MANE_select
ENST00000454580.7	NP_001159575.1
ENST00000592007.1	alternative 5' UTR
ENST00000301242.9	MANE_select
ENST00000651064.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000339413.11	MANE_select
ENST00000592694.5	alternative 5' UTR
ENST00000392124.7	alternative 5' UTR
ENST00000329420.12	NP_001034760.1
ENST00000587361.1	NMD likely if extended
ENST00000587039.1	alternative 5' UTR
ENST00000301246.10	MANE_select
ENST00000263372.5	MANE_select
ENST00000588137.1	392759
ENST00000409235.8	MANE_select
ENST00000409410.6	alternative 5' UTR
ENST00000477793.2	NMD likely if extended
ENST00000466060.5	NMD likely if extended
ENST00000215071.9	MANE_select
ENST00000585598.1	CAGE supported TSS
ENST00000602911.5	CAGE supported TSS
ENST00000592561.5	CAGE supported TSS
ENST00000591250.1	alternative 5' UTR
ENST00000334928.11	MANE_select
ENST00000587676.1	alternative 5' UTR
ENST00000586301.5	alternative 5' UTR
ENST00000587947.5	alternative 5' UTR
ENST00000587564.2	NMD likely if extended
ENST00000585954.1	NMD likely if extended
ENST00000615340.4	non canonical TEC
ENST00000615340.4	non canonical conserved
ENST00000586305.5	non canonical conserved
ENST00000615439.5	MANE_select
ENST00000615439.5	genebuild_only_MANE
ENST00000589474.5	non canonical conserved
ENST00000614135.4	non canonical conserved
ENST00000622174.4	non canonical conserved
ENST00000587753.5	non canonical conserved
ENST00000454404.6	non canonical conserved
ENST00000617966.4	non canonical conserved
ENST00000589358.5	non canonical conserved
ENST00000592322.5	non canonical other
ENST00000588404.5	non canonical conserved
ENST00000587738.2	non canonical conserved
ENST00000589100.2	non canonical conserved
ENST00000359596.8	MANE_select
ENST00000396857.7	MANE_select
ENST00000248342.9	MANE_select
ENST00000252699.7	MANE_select
ENST00000328867.9	MANE_select
ENST00000314980.5	MANE_select
ENST00000307751.9	MANE_select
ENST00000596628.5	NMD likely if extended
ENST00000597803.1	NMD likely if extended
ENST00000221418.9	MANE_select
ENST00000601094.5	alternative 5' UTR
ENST00000597805.1	NMD likely if extended
ENST00000221419.10	MANE_select
ENST00000221419.10	non canonical U12
ENST00000647557.1	non canonical U12
ENST00000601449.5	non canonical U12
ENST00000388749.7	non canonical U12
ENST00000600873.5	non canonical U12
ENST00000591812.2	MANE_select
ENST00000591812.2	NP_001182762.1
ENST00000249396.12	MANE_select
ENST00000414941.5	alternative 5' UTR
ENST00000407552.5	alternative 5' UTR
ENST00000381766.8	alternative 5' UTR
ENST00000437828.5	alternative 5' UTR
ENST00000447739.1	alternative 5' UTR
ENST00000313582.6	MANE_select
ENST00000221431.11	MANE_select
ENST00000308018.9	MANE_select
ENST00000308018.9	alternative 5' UTR
ENST00000402029.3	alternative 5' UTR
ENST00000292852.9	MANE_select
ENST00000595329.5	alternative 5' UTR
ENST00000601394.1	95477
ENST00000660381.1	Assembled from SLRseq reads (SRP049776)
ENST00000292853.9	MANE_select
ENST00000593847.1	alternative 5' UTR
ENST00000331256.10	MANE_select
ENST00000601531.1	not organism-supported
ENST00000593480.5	alternative 5' UTR
ENST00000593690.5	alternative 5' UTR
ENST00000599386.5	alternative 5' UTR
ENST00000599657.5	alternative 5' UTR
ENST00000339852.5	MANE_select
ENST00000318438.7	MANE_select
ENST00000413851.3	MANE_select
ENST00000331982.6	MANE_select
ENST00000333625.3	MANE_select
ENST00000248668.5	MANE_select
ENST00000597595.6	MANE_select
ENST00000600322.5	alternative 5' UTR
ENST00000602243.5	alternative 5' UTR
ENST00000599712.1	alternative 5' UTR
ENST00000594204.1	NMD likely if extended
ENST00000596368.1	non canonical other
ENST00000600018.1	not organism-supported
ENST00000221265.8	MANE_select
ENST00000595564.5	NP_001243755.1
ENST00000599417.2	upstream ATG
ENST00000315588.11	CAGE supported TSS
ENST00000315588.11	MANE_select
ENST00000315588.11	NP_060062.1
ENST00000315588.11	upstream ATG
ENST00000600973.5	CAGE supported TSS
ENST00000594368.5	CAGE supported TSS
ENST00000596297.1	CAGE supported TSS
ENST00000597629.3	MANE_select
ENST00000597629.3	upstream ATG
ENST00000594045.2	upstream ATG
ENST00000425673.6	MANE_select
ENST00000451354.6	alternative 5' UTR
ENST00000478523.1	alternative 5' UTR
ENST00000251453.8	MANE_select
ENST00000602153.5	NMD likely if extended
ENST00000594990.5	alternative 5' UTR
ENST00000594990.5	non canonical other
ENST00000601515.5	alternative 5' UTR
ENST00000432763.7	MANE_select
ENST00000432763.7	genebuild_only_MANE
ENST00000594729.5	alternative 5' UTR
ENST00000598725.5	alternative 5' UTR
ENST00000607714.6	CAGE supported TSS
ENST00000607714.6	MANE_select
ENST00000607714.6	upstream ATG
ENST00000356433.10	MANE_select
ENST00000356433.10	NP_982353.1
ENST00000600579.1	NMD likely if extended
ENST00000326282.5	MANE_select
ENST00000390658.4	MANE_select
ENST00000390658.4	upstream ATG
ENST00000221797.5	MANE_select
ENST00000392051.4	MANE_select
ENST00000360675.7	NP_982297.1
ENST00000392052.8	MANE_select
ENST00000221804.5	MANE_select
ENST00000638280.2	MANE_select
ENST00000593685.5	alternative 5' UTR
ENST00000323039.10	MANE_select
ENST00000600611.5	alternative 5' UTR
ENST00000221801.8	MANE_select
ENST00000157812.7	MANE_select
ENST00000651981.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000347077.9	MANE_select
ENST00000595225.1	alternative 5' UTR
ENST00000434248.6	MANE_select
ENST00000598845.5	NAGNAG splice site
ENST00000593605.1	alternative 5' UTR
ENST00000595508.1	NMD likely if extended
ENST00000594395.5	NAGNAG splice site
ENST00000595773.5	alternative 5' UTR
ENST00000601715.5	NAGNAG splice site
ENST00000599368.5	alternative 5' UTR
ENST00000599972.1	alternative 5' UTR
ENST00000253055.8	MANE_select
ENST00000593906.1	NMD likely if extended
ENST00000430325.7	MANE_select
ENST00000430325.7	NP_079153.2
ENST00000392038.7	LR annotation
ENST00000392038.7	MANE_select
ENST00000391844.8	alternative 5' UTR
ENST00000480878.6	NMD likely if extended
ENST00000441941.6	alternative 5' UTR
ENST00000486368.6	alternative 5' UTR
ENST00000596634.5	alternative 5' UTR
ENST00000452077.5	alternative 5' UTR
ENST00000392037.5	alternative 5' UTR
ENST00000416362.5	alternative 5' UTR
ENST00000578123.5	alternative 5' UTR
ENST00000672890.1	alternative 5' UTR
ENST00000423127.5	alternative 5' UTR
ENST00000456441.5	alternative 5' UTR
ENST00000583859.5	alternative 5' UTR
ENST00000580747.5	alternative 5' UTR
ENST00000416994.6	alternative 5' UTR
ENST00000427375.1	alternative 5' UTR
ENST00000582006.5	alternative 5' UTR
ENST00000599685.5	alternative 5' UTR
ENST00000392032.6	alternative 5' UTR
ENST00000598962.5	alternative 5' UTR
ENST00000409587.5	alternative 5' UTR
ENST00000602131.5	alternative 5' UTR
ENST00000409735.9	MANE_select
ENST00000409735.9	alternative 5' UTR
ENST00000600948.5	alternative 5' UTR
ENST00000356508.9	alternative 5' UTR
ENST00000596682.5	alternative 5' UTR
ENST00000594908.5	alternative 5' UTR
ENST00000409281.5	alternative 5' UTR
ENST00000359274.5	alternative 5' UTR
ENST00000291823.3	MANE_select
ENST00000676316.1	Snaptron_GTEX
ENST00000676076.1	Snaptron_GTEX
ENST00000673881.1	CAGE supported TSS
ENST00000674773.1	CAGE supported TSS
ENST00000674773.1	alternative 5' UTR
ENST00000324001.8	MANE_select
ENST00000674005.2	CAGE supported TSS
ENST00000674005.2	Snaptron_GTEX
ENST00000676260.1	Snaptron_GTEX
ENST00000675517.1	Snaptron_GTEX
ENST00000674642.1	Snaptron_GTEX
ENST00000674978.1	Snaptron_GTEX
ENST00000675300.1	intropolis_filtered
ENST00000676330.1	Snaptron_GTEX
ENST00000674912.1	NMD likely if extended
ENST00000674912.1	Snaptron_GTEX
ENST00000676344.1	Snaptron_GTEX
ENST00000599513.1	NMD likely if extended
ENST00000674781.1	Snaptron_GTEX
ENST00000675339.1	Snaptron_GTEX
ENST00000676078.1	NMD likely if extended
ENST00000676078.1	Snaptron_GTEX
ENST00000675511.1	Snaptron_GTEX
ENST00000674899.1	Snaptron_GTEX
ENST00000675099.1	Snaptron_GTEX
ENST00000675156.1	Snaptron_GTEX
ENST00000675021.1	Snaptron_GTEX
ENST00000676230.1	Snaptron_GTEX
ENST00000676047.1	Snaptron_GTEX
ENST00000676042.1	Snaptron_GTEX
ENST00000357949.5	MANE_select
ENST00000614440.1	CAGE supported TSS
ENST00000392028.8	alternative 5' UTR
ENST00000322354.4	MANE_select
ENST00000322354.4	upstream uORF
ENST00000599706.1	alternative 5' UTR
ENST00000596456.1	alternative 5' UTR
ENST00000263368.9	MANE_select
ENST00000598249.6	MANE_select
ENST00000598249.6	alternative 5' UTR
ENST00000291842.10	MANE_select
ENST00000593764.5	NAGNAG splice site
ENST00000597396.5	NAGNAG splice site
ENST00000594862.1	NAGNAG splice site
ENST00000396819.8	MANE_select
ENST00000252891.8	MANE_select
ENST00000540131.5	alternative 5' UTR
ENST00000600967.5	NAGNAG splice site
ENST00000598773.5	alternative 5' UTR
ENST00000595741.5	alternative 5' UTR
ENST00000600636.5	alternative 5' UTR
ENST00000599594.1	NMD likely if extended
ENST00000678467.1	alternative 5' UTR
ENST00000601967.6	alternative 5' UTR
ENST00000678404.1	alternative 5' UTR
ENST00000594720.6	alternative 5' UTR
ENST00000324464.8	MANE_select
ENST00000594084.5	alternative 5' UTR
ENST00000600707.5	alternative 5' UTR
ENST00000596357.1	alternative 5' UTR
ENST00000263370.3	MANE_select
ENST00000469741.6	FLJ41131
ENST00000378313.7	MANE_select
ENST00000597353.5	alternative 5' UTR
ENST00000599362.5	alternative 5' UTR
ENST00000599570.5	NMD likely if extended
ENST00000243563.8	MANE_select
ENST00000597600.5	alternative 5' UTR
ENST00000594436.5	alternative 5' UTR
ENST00000597784.5	alternative 5' UTR
ENST00000263369.4	MANE_select
ENST00000357052.8	MANE_select
ENST00000357052.8	alternative 3' UTR
ENST00000602069.5	NMD likely if extended
ENST00000601949.5	NMD likely if extended
ENST00000598654.1	alternative 5' UTR
ENST00000303961.9	MANE_select
ENST00000593972.1	alternative 5' UTR
ENST00000406058.6	alternative 5' UTR
ENST00000593726.5	alternative 5' UTR
ENST00000594380.1	alternative 5' UTR
ENST00000593397.1	alternative 5' UTR
ENST00000601733.1	alternative 5' UTR
ENST00000593525.1	alternative 5' UTR
ENST00000596517.1	alternative 5' UTR
ENST00000595051.1	alternative 3' UTR
ENST00000437853.1	This is Cyp2f2 cytochrome P450, family 2, subfamily f, polypeptide 2 in mouse
ENST00000301141.10	CARS
ENST00000301141.10	LR annotation
ENST00000301141.10	MANE_select
ENST00000301146.9	MANE_select
ENST00000651727.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000324071.10	CAGE supported TSS
ENST00000324071.10	LR annotation
ENST00000324071.10	MANE_select
ENST00000598834.2	NMD likely if extended
ENST00000330436.4	MANE_select
ENST00000531409.5	NAGNAG splice site
ENST00000331105.7	MANE_select
ENST00000310054.9	MANE_select
ENST00000301178.9	MANE_select
ENST00000599719.5	alternative 5' UTR
ENST00000601309.5	alternative 5' UTR
ENST00000392006.8	MANE_select
ENST00000601336.5	alternative 5' UTR
ENST00000593587.5	alternative 5' UTR
ENST00000593587.5	overlapping uORF
ENST00000594207.1	NMD likely if extended
ENST00000595336.1	alternative 5' UTR
ENST00000221930.6	MANE_select
ENST00000651374.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000269967.4	MANE_select
ENST00000413014.6	alternative 5' UTR
ENST00000392002.7	MANE_select
ENST00000537354.5	alternative 5' UTR
ENST00000342187.9	alternative 5' UTR
ENST00000546362.5	alternative 3' UTR
ENST00000535712.1	alternative 3' UTR
ENST00000675972.1	alternative 5' UTR
ENST00000243578.8	MANE_select
ENST00000221233.9	MANE_select
ENST00000269980.7	MANE_select
ENST00000321702.2	upstream uORF
ENST00000221943.14	MANE_select
ENST00000592922.6	NP_001161343.1
ENST00000378187.3	MANE_select
ENST00000378187.3	confirm experimentally
ENST00000651285.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668141.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651806.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651156.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656967.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664904.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650804.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651572.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652484.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652144.2	Assembled from SLRseq reads (SRP049776)
ENST00000594315.3	Assembled from SLRseq reads (SRP049776)
ENST00000597702.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000401445.4	MANE_select
ENST00000457737.5	non canonical polymorphism
ENST00000632983.1	alternative 3' UTR
ENST00000401731.6	MANE_select
ENST00000401731.6	alternative 3' UTR
ENST00000221992.11	MANE_select
ENST00000405816.5	alternative 3' UTR
ENST00000595740.1	alternative 5' UTR
ENST00000199764.7	MANE_select
ENST00000357396.8	MANE_select
ENST00000609812.6	MANE_select
ENST00000600017.5	alternative 5' UTR
ENST00000269945.8	MANE_select
ENST00000602098.1	NMD likely if extended
ENST00000596258.5	alternative 5' UTR
ENST00000596660.1	alternative 5' UTR
ENST00000600467.6	alternative 5' UTR
ENST00000598742.6	MANE_select
ENST00000593863.5	alternative 5' UTR
ENST00000221972.8	MANE_select
ENST00000354532.8	MANE_select
ENST00000222008.11	MANE_select
ENST00000648268.1	CAGE supported TSS
ENST00000648268.1	LR annotation
ENST00000648268.1	MANE_select
ENST00000543770.5	CAGE supported TSS
ENST00000473086.3	alternative 5' UTR
ENST00000468774.3	CAGE supported TSS
ENST00000636197.1	alternative 5' UTR
ENST00000593562.5	alternative 5' UTR
ENST00000600245.1	upstream uORF
ENST00000597391.1	alternative 5' UTR
ENST00000359044.5	MANE_select
ENST00000524801.6	CAGE supported TSS
ENST00000636631.1	CAGE supported TSS
ENST00000596251.6	MANE_select
ENST00000596251.6	alternative 5' UTR
ENST00000598200.1	alternative 5' UTR
ENST00000678490.1	RNAseq_introns
ENST00000678490.1	Snaptron_GTEX
ENST00000678490.1	intropolis_filtered
ENST00000301215.8	MANE_select
ENST00000597945.1	alternative 5' UTR
ENST00000677025.1	Snaptron_GTEX
ENST00000677025.1	intropolis_filtered
ENST00000679257.1	Snaptron_GTEX
ENST00000679257.1	alternative 3' UTR
ENST00000679257.1	intropolis_filtered
ENST00000222330.8	CCDS12599.1
ENST00000222330.8	MANE_select
ENST00000677702.1	Snaptron_GTEX
ENST00000677702.1	intropolis_filtered
ENST00000678008.1	Snaptron_GTEX
ENST00000677575.1	Snaptron_GTEX
ENST00000677575.1	intropolis_filtered
ENST00000679279.1	Snaptron_GTEX
ENST00000679279.1	intropolis_filtered
ENST00000678692.1	Snaptron_GTEX
ENST00000678692.1	intropolis_filtered
ENST00000677897.1	Snaptron_GTEX
ENST00000677897.1	intropolis_filtered
ENST00000677464.1	Snaptron_GTEX
ENST00000677464.1	intropolis_filtered
ENST00000678040.1	Snaptron_GTEX
ENST00000678040.1	intropolis_filtered
ENST00000678524.1	Snaptron_GTEX
ENST00000678524.1	intropolis_filtered
ENST00000676724.1	Snaptron_GTEX
ENST00000677469.1	Snaptron_GTEX
ENST00000677469.1	intropolis_filtered
ENST00000678751.1	Snaptron_GTEX
ENST00000679108.1	Snaptron_GTEX
ENST00000679108.1	intropolis_filtered
ENST00000677751.1	Snaptron_GTEX
ENST00000677751.1	intropolis_filtered
ENST00000676517.1	Snaptron_GTEX
ENST00000676517.1	intropolis_filtered
ENST00000678354.1	Snaptron_GTEX
ENST00000676676.1	Snaptron_GTEX
ENST00000676676.1	intropolis_filtered
ENST00000678324.1	Snaptron_GTEX
ENST00000678324.1	intropolis_filtered
ENST00000677735.1	Snaptron_GTEX
ENST00000677735.1	intropolis_filtered
ENST00000676603.1	Snaptron_GTEX
ENST00000676603.1	intropolis_filtered
ENST00000676790.1	Snaptron_GTEX
ENST00000678427.1	Snaptron_GTEX
ENST00000678427.1	intropolis_filtered
ENST00000677424.1	Snaptron_GTEX
ENST00000677424.1	intropolis_filtered
ENST00000679338.1	intropolis_filtered
ENST00000678936.1	Snaptron_GTEX
ENST00000678936.1	intropolis_filtered
ENST00000677371.1	Snaptron_GTEX
ENST00000677371.1	intropolis_filtered
ENST00000679145.1	Snaptron_GTEX
ENST00000678672.1	Snaptron_GTEX
ENST00000678258.1	Snaptron_GTEX
ENST00000678258.1	intropolis_filtered
ENST00000676845.1	Snaptron_GTEX
ENST00000676845.1	intropolis_filtered
ENST00000677449.1	intropolis_filtered
ENST00000678491.1	Snaptron_GTEX
ENST00000678276.1	Snaptron_GTEX
ENST00000676537.1	intropolis_filtered
ENST00000676949.1	Ensembl_RNAseq_introns
ENST00000222329.9	MANE_select
ENST00000572681.6	NAGNAG splice site
ENST00000681038.1	CAGE supported TSS
ENST00000681038.1	alternative 5' UTR
ENST00000575839.2	not organism-supported
ENST00000160740.7	NAGNAG splice site
ENST00000573349.5	NAGNAG splice site
ENST00000262890.8	MANE_select
ENST00000595530.5	alternative 5' UTR
ENST00000601865.5	alternative 5' UTR
ENST00000341747.8	MANE_select
ENST00000341747.8	alternative 5' UTR
ENST00000595750.2	alternative 5' UTR
ENST00000301204.8	MANE_select
ENST00000598766.1	not organism-supported
ENST00000251268.11	MANE_select
ENST00000222032.10	MANE_select
ENST00000597255.1	alternative 5' UTR
ENST00000661814.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000244289.9	MANE_select
ENST00000601181.6	MANE_select
ENST00000161559.11	MANE_select
ENST00000471298.2	not best-in-genome evidence
ENST00000244336.10	MANE_select
ENST00000327495.10	MANE_select
ENST00000327495.10	upstream ATG
ENST00000306511.5	MANE_select
ENST00000436291.7	MANE_select
ENST00000187910.7	MANE_select
ENST00000406070.7	MANE_select
ENST00000320078.12	MANE_select
ENST00000320078.12	upstream ATG
ENST00000306322.7	upstream ATG
ENST00000406487.6	MANE_select
ENST00000329509.6	alternative 3' UTR
ENST00000407356.5	alternative 3' UTR
ENST00000342951.11	MANE_select
ENST00000342951.11	alternative 3' UTR
ENST00000405312.8	MANE_select
ENST00000270077.8	MANE_select
ENST00000618265.5	MANE_select
ENST00000598265.2	MANE_select
ENST00000598265.2	non canonical TEC
ENST00000244333.4	MANE_select
ENST00000594808.1	alternative 5' UTR
ENST00000601646.1	alternative 5' UTR
ENST00000292147.7	MANE_select
ENST00000598080.5	alternative 5' UTR
ENST00000601282.1	alternative 5' UTR
ENST00000262887.10	MANE_select
ENST00000599207.6	NP_001180550.2
ENST00000599207.6	upstream ATG
ENST00000569031.6	alternative 5' UTR
ENST00000562365.2	alternative 5' UTR
ENST00000598324.1	alternative 5' UTR
ENST00000391965.6	alternative 5' UTR
ENST00000525771.1	alternative 5' UTR
ENST00000533118.5	alternative 5' UTR
ENST00000528387.5	alternative 5' UTR
ENST00000529930.1	alternative 5' UTR
ENST00000336564.5	MANE_select
ENST00000607544.1	alternative 5' UTR
ENST00000607544.1	upstream ATG
ENST00000417606.3	MANE_select
ENST00000417606.3	upstream ATG
ENST00000300811.8	MANE_select
ENST00000222374.3	MANE_select
ENST00000340093.8	MANE_select
ENST00000602141.5	alternative 5' UTR
ENST00000244314.6	MANE_select
ENST00000270066.11	MANE_select
ENST00000602222.5	alternative 5' UTR
ENST00000597586.5	alternative 5' UTR
ENST00000601925.5	alternative 5' UTR
ENST00000599804.5	alternative 5' UTR
ENST00000596714.1	alternative 5' UTR
ENST00000600909.1	alternative 3' UTR
ENST00000648319.1	CAGE supported TSS
ENST00000648319.1	LR annotation
ENST00000648319.1	MANE_select
ENST00000377950.8	MANE_select
ENST00000414615.6	alternative 5' UTR
ENST00000594049.5	alternative 5' UTR
ENST00000602179.1	alternative 5' UTR
ENST00000618787.5	MANE_select
ENST00000650832.1	upstream ATG
ENST00000593164.6	upstream ATG
ENST00000587539.2	MANE_select
ENST00000587539.2	NP_001028891.2
ENST00000655972.1	Assembled from SLRseq reads (SRP049776)
ENST00000586247.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000269973.10	MANE_select
ENST00000269973.10	alternative 5' UTR
ENST00000591168.5	alternative 5' UTR
ENST00000587682.6	MANE_select
ENST00000251269.9	alternative 5' UTR
ENST00000592350.5	alternative 5' UTR
ENST00000590411.5	alternative 5' UTR
ENST00000270014.7	MANE_select
ENST00000591532.5	alternative 5' UTR
ENST00000590615.5	alternative 5' UTR
ENST00000586454.1	alternative 5' UTR
ENST00000653813.1	Assembled from SLRseq reads (SRP049776)
ENST00000667325.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670660.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000429154.7	MANE_select
ENST00000585491.1	alternative 5' UTR
ENST00000653695.1	Assembled from SLRseq reads (SRP049776)
ENST00000391960.4	MANE_select
ENST00000391960.4	NP_001123468.1
ENST00000434772.8	MANE_select
ENST00000421176.4	MANE_select
ENST00000589680.5	alternative 5' UTR
ENST00000336976.10	NP_037530.2
ENST00000589870.5	alternative 5' UTR
ENST00000591511.1	alternative 5' UTR
ENST00000661725.1	Assembled from SLRseq reads (SRP049776)
ENST00000589155.5	alternative 5' UTR
ENST00000262894.11	MANE_select
ENST00000588926.5	alternative 5' UTR
ENST00000590612.1	alternative 5' UTR
ENST00000590612.1	upstream uORF
ENST00000426739.7	MANE_select
ENST00000592437.5	alternative 5' UTR
ENST00000654455.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000590578.5	alternative 5' UTR
ENST00000586286.5	alternative 5' UTR
ENST00000585560.5	alternative 5' UTR
ENST00000586914.5	alternative 5' UTR
ENST00000413984.6	alternative 5' UTR
ENST00000588742.5	NP_001139692.1
ENST00000588742.5	alternative 5' UTR
ENST00000300823.10	NP_057003.2
ENST00000586203.5	alternative 5' UTR
ENST00000590467.5	alternative 5' UTR
ENST00000588127.5	alternative 5' UTR
ENST00000590089.5	alternative 5' UTR
ENST00000590524.1	alternative 5' UTR
ENST00000313040.12	MANE_select
ENST00000586048.1	alternative 5' UTR
ENST00000291182.9	MANE_select
ENST00000590668.5	alternative 5' UTR
ENST00000588489.5	alternative 5' UTR
ENST00000354340.9	MANE_select
ENST00000337401.8	NP_001076804.1
ENST00000590687.5	alternative 5' UTR
ENST00000614994.5	MANE_select
ENST00000614994.5	alternative 5' UTR
ENST00000588655.1	NMD likely if extended
ENST00000614049.5	MANE_select
ENST00000614049.5	upstream uORF
ENST00000591064.1	alternative 5' UTR
ENST00000614924.5	MANE_select
ENST00000402988.6	MANE_select
ENST00000441389.1	alternative 3' UTR
ENST00000662585.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657348.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425690.8	MANE_select
ENST00000187830.2	FLJ36858
ENST00000622237.4	alternative 5' UTR
ENST00000618372.4	alternative 5' UTR
ENST00000619799.4	alternative 5' UTR
ENST00000591979.1	alternative 5' UTR
ENST00000459648.1	FLJ46368
ENST00000587331.7	LR annotation
ENST00000587331.7	MANE_select
ENST00000164227.10	MANE_select
ENST00000647358.2	CAGE supported TSS
ENST00000647358.2	LR annotation
ENST00000647358.2	MANE_select
ENST00000611077.5	NMD exception
ENST00000270233.12	MANE_select
ENST00000252483.10	MANE_select
ENST00000589253.1	alternative 5' UTR
ENST00000589649.1	alternative 5' UTR
ENST00000426677.7	MANE_select
ENST00000426677.7	alternative 5' UTR
ENST00000446996.5	alternative 5' UTR
ENST00000252486.9	MANE_select
ENST00000425718.1	alternative 5' UTR
ENST00000588802.5	alternative 5' UTR
ENST00000592535.5	alternative 5' UTR
ENST00000589078.1	alternative 5' UTR
ENST00000592954.2	MANE_select
ENST00000252490.7	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000252490.7	MANE_select
ENST00000337392.10	MANE_select
ENST00000585961.1	alternative 5' UTR
ENST00000221452.13	MANE_select
ENST00000221455.8	MANE_select
ENST00000588936.5	alternative 5' UTR
ENST00000303809.7	MANE_select
ENST00000655031.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000658996.1	Assembled from SLRseq reads (SRP049776)
ENST00000591607.1	alternative 5' UTR
ENST00000591747.5	alternative 5' UTR
ENST00000270257.9	MANE_select
ENST00000391951.2	alternative 5' UTR
ENST00000587566.5	alternative 5' UTR
ENST00000262891.9	MANE_select
ENST00000221462.9	MANE_select
ENST00000589776.1	alternative 5' UTR
ENST00000585934.1	MANE_select
ENST00000433642.3	MANE_select
ENST00000587722.1	alternative 5' UTR
ENST00000592910.1	alternative 3' UTR
ENST00000413988.3	MANE_select
ENST00000221476.4	MANE_select
ENST00000589373.5	alternative 5' UTR
ENST00000391946.7	MANE_select
ENST00000585434.5	NAGNAG splice site
ENST00000590063.1	alternative 5' UTR
ENST00000391945.10	LR annotation
ENST00000391945.10	MANE_select
ENST00000391941.6	alternative 5' UTR
ENST00000360957.10	MANE_select
ENST00000418234.6	alternative 5' UTR
ENST00000593226.5	alternative 5' UTR
ENST00000309424.8	MANE_select
ENST00000300853.8	MANE_select
ENST00000589165.5	alternative 5' UTR
ENST00000589381.5	alternative 5' UTR
ENST00000592083.5	alternative 5' UTR
ENST00000589214.1	alternative 5' UTR
ENST00000353609.8	MANE_select
ENST00000589593.1	alternative 5' UTR
ENST00000245923.9	MANE_select
ENST00000401705.5	alternative 5' UTR
ENST00000451287.6	confirm experimentally
ENST00000396735.6	alternative 5' UTR
ENST00000589627.1	alternative 5' UTR
ENST00000245932.11	MANE_select
ENST00000586619.1	NMD likely if extended
ENST00000263275.5	MANE_select
ENST00000323040.5	MANE_select
ENST00000245925.8	MANE_select
ENST00000586770.5	alternative 5' UTR
ENST00000591721.5	alternative 5' UTR
ENST00000593255.5	alternative 5' UTR
ENST00000590018.1	alternative 5' UTR
ENST00000652180.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000590918.6	MANE_select
ENST00000342669.8	MANE_select
ENST00000587367.5	alternative 5' UTR
ENST00000588599.5	alternative 5' UTR
ENST00000588301.5	alternative 5' UTR
ENST00000677024.1	CHS.27027.5
ENST00000677542.1	CHS.27027.3
ENST00000678102.1	CHS.27027.4
ENST00000012049.10	MANE_select
ENST00000678862.1	align_id:3638203|asmbl_128368
ENST00000317683.4	MANE_select
ENST00000586899.1	alternative 5' UTR
ENST00000591686.1	alternative 5' UTR
ENST00000457052.3	MANE_select
ENST00000317578.7	CAGE supported TSS
ENST00000317578.7	LR annotation
ENST00000317578.7	MANE_select
ENST00000291270.9	MANE_select
ENST00000270223.7	MANE_select
ENST00000221538.8	MANE_select
ENST00000245934.12	MANE_select
ENST00000602061.5	alternative 5' UTR
ENST00000598059.5	alternative 5' UTR
ENST00000594293.5	alternative 5' UTR
ENST00000601600.1	alternative 5' UTR
ENST00000302177.3	MANE_select
ENST00000302165.5	MANE_select
ENST00000322217.6	MANE_select
ENST00000341294.4	MANE_select
ENST00000341294.4	upstream ATG
ENST00000263257.6	CAGE supported TSS
ENST00000263257.6	MANE_select
ENST00000595358.5	MANE_select
ENST00000594672.5	alternative 5' UTR
ENST00000008938.5	MANE_select
ENST00000595955.2	Assembled from SLRseq reads (SRP049776)
ENST00000662557.1	Assembled from SLRseq reads (SRP049776)
ENST00000341415.3	MANE_select
ENST00000601052.1	NAGNAG splice site
ENST00000594027.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666136.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663593.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669846.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667831.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664765.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000598518.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668528.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670157.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000599817.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663652.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656054.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666402.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656560.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000437936.2	MANE_select
ENST00000377670.9	MANE_select
ENST00000012443.9	MANE_select
ENST00000307522.5	CAGE supported TSS
ENST00000307522.5	LR annotation
ENST00000307522.5	MANE_select
ENST00000617053.2	CAGE supported TSS
ENST00000313683.15	MANE_select
ENST00000599531.2	MANE_select
ENST00000391918.6	alternative 5' UTR
ENST00000598871.5	alternative 5' UTR
ENST00000291295.14	CAGE supported TSS
ENST00000291295.14	LR annotation
ENST00000291295.14	MANE_select
ENST00000594523.5	alternative 5' UTR
ENST00000291294.7	MANE_select
ENST00000391916.7	MANE_select
ENST00000291281.9	MANE_select
ENST00000600194.5	alternative 5' UTR
ENST00000595132.5	alternative 5' UTR
ENST00000598633.1	alternative 5' UTR
ENST00000593363.1	alternative 5' UTR
ENST00000263280.11	MANE_select
ENST00000263280.11	NMD exception
ENST00000391910.7	NMD exception
ENST00000539396.5	NMD exception
ENST00000600615.5	alternative 3' UTR
ENST00000593979.6	alternative 5' UTR
ENST00000597063.6	alternative 5' UTR
ENST00000597021.6	alternative 5' UTR
ENST00000596012.2	alternative 5' UTR
ENST00000601299.5	alternative 5' UTR
ENST00000595570.5	alternative 5' UTR
ENST00000598271.5	alternative 5' UTR
ENST00000597313.5	alternative 5' UTR
ENST00000593875.5	alternative 3' UTR
ENST00000391909.7	alternative 5' UTR
ENST00000318584.10	MANE_select
ENST00000602250.5	alternative 5' UTR
ENST00000595868.5	alternative 5' UTR
ENST00000600629.5	alternative 5' UTR
ENST00000602181.5	alternative 5' UTR
ENST00000593800.5	alternative 5' UTR
ENST00000600227.5	alternative 5' UTR
ENST00000600005.5	alternative 5' UTR
ENST00000596460.5	alternative 5' UTR
ENST00000600834.5	alternative 5' UTR
ENST00000593877.1	alternative 5' UTR
ENST00000593902.1	alternative 5' UTR
ENST00000542575.6	MANE_select
ENST00000598022.1	alternative 5' UTR
ENST00000617006.1	CAGE supported TSS
ENST00000263270.11	MANE_select
ENST00000672722.1	MANE_select
ENST00000602212.6	MANE_select
ENST00000449844.6	alternative 5' UTR
ENST00000439365.6	alternative 5' UTR
ENST00000594670.1	alternative 5' UTR
ENST00000253047.7	MANE_select
ENST00000253048.10	MANE_select
ENST00000253048.10	non canonical U12
ENST00000597069.1	not organism-supported
ENST00000594144.5	alternative 5' UTR
ENST00000597808.5	alternative 5' UTR
ENST00000270225.12	MANE_select
ENST00000439096.3	MANE_select
ENST00000671594.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000221922.11	MANE_select
ENST00000599398.5	alternative 5' UTR
ENST00000595659.5	alternative 5' UTR
ENST00000596938.1	alternative 5' UTR
ENST00000552360.4	MANE_select
ENST00000552360.4	NP_848606.2
ENST00000552360.4	upstream ATG
ENST00000355085.4	MANE_select
ENST00000595464.3	MANE_select
ENST00000328771.9	MANE_select
ENST00000486327.6	QC splicing correct
ENST00000486327.6	lr13, QC, 22/8/12
ENST00000558555.6	MANE_select
ENST00000559524.5	alternative 3' UTR
ENST00000236877.11	MANE_select
ENST00000669287.1	Assembled from SLRseq reads (SRP049776)
ENST00000338134.8	MANE_select
ENST00000263354.8	MANE_select
ENST00000594866.2	alternative 5' UTR
ENST00000614245.2	CAGE supported TSS
ENST00000263277.8	MANE_select
ENST00000246802.10	MANE_select
ENST00000598681.5	NMD likely if extended
ENST00000593892.5	alternative 3' UTR
ENST00000595615.1	alternative 3' UTR
ENST00000601048.6	MANE_select
ENST00000601048.6	upstream ATG
ENST00000566686.5	alternative 5' UTR
ENST00000221996.12	MANE_select
ENST00000602001.1	alternative 3' UTR
ENST00000660899.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000222002.4	MANE_select
ENST00000344839.3	MANE_select
ENST00000339841.7	MANE_select
ENST00000339841.7	upstream ATG
ENST00000593782.1	alternative 3' UTR
ENST00000593413.1	alternative 3' UTR
ENST00000293255.3	MANE_select
ENST00000599921.6	MANE_select
ENST00000596510.5	non canonical TEC
ENST00000595161.5	non canonical TEC
ENST00000595899.5	NMD likely if extended
ENST00000594156.5	NMD likely if extended
ENST00000596138.1	alternative 5' UTR
ENST00000263274.12	MANE_select
ENST00000601091.5	NAGNAG splice site
ENST00000593425.5	alternative 5' UTR
ENST00000598938.1	upstream uORF
ENST00000614654.2	CAGE supported TSS
ENST00000614654.2	MANE_select
ENST00000328759.11	non canonical TEC
ENST00000600800.1	alternative 3' UTR
ENST00000517510.5	alternative 5' UTR
ENST00000651546.1	MANE_select
ENST00000518979.5	alternative 5' UTR
ENST00000519940.6	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000520153.5	alternative 5' UTR
ENST00000520015.5	alternative 5' UTR
ENST00000522068.5	NMD likely if extended
ENST00000522889.5	alternative 5' UTR
ENST00000522431.5	alternative 5' UTR
ENST00000520007.5	alternative 5' UTR
ENST00000521437.1	alternative 5' UTR
ENST00000595201.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000595201.2	Assembled from SLRseq reads (SRP049776)
ENST00000595607.6	MANE_select
ENST00000600687.5	alternative 5' UTR
ENST00000601320.1	alternative 5' UTR
ENST00000315396.7	NP_653178.3
ENST00000674294.1	MANE_select
ENST00000674294.1	alternative 5' UTR
ENST00000497273.1	non canonical TEC
ENST00000497803.2	alternative 5' UTR
ENST00000599704.5	alternative 5' UTR
ENST00000270221.11	MANE_select
ENST00000597279.5	alternative 5' UTR
ENST00000293261.8	MANE_select
ENST00000344846.7	MANE_select
ENST00000330720.7	MANE_select
ENST00000263269.4	CAGE supported TSS
ENST00000263269.4	MANE_select
ENST00000598711.1	alternative 5' UTR
ENST00000253237.10	MANE_select
ENST00000342291.3	MANE_select
ENST00000342291.3	alternative 5' UTR
ENST00000660043.1	Assembled from RACEseq reads
ENST00000596497.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452733.7	MANE_select
ENST00000648216.1	confirm experimentally
ENST00000672160.1	CAGE supported TSS
ENST00000673139.1	upstream ATG
ENST00000666424.1	CAGE supported TSS
ENST00000201586.7	MANE_select
ENST00000263266.4	MANE_select
ENST00000321762.3	MANE_select
ENST00000549920.6	MANE_select
ENST00000245222.9	MANE_select
ENST00000598088.5	alternative 5' UTR
ENST00000222122.10	MANE_select
ENST00000084798.9	MANE_select
ENST00000270235.11	MANE_select
ENST00000522966.2	alternative 5' UTR
ENST00000425340.3	MANE_select
ENST00000318083.11	MANE_select
ENST00000222145.9	MANE_select
ENST00000332955.7	MANE_select
ENST00000645652.2	CAGE supported TSS
ENST00000645652.2	MANE_select
ENST00000645652.2	upstream ATG
ENST00000593756.6	MANE_select
ENST00000222157.5	CAGE supported TSS
ENST00000222157.5	alternative 5' UTR
ENST00000316273.11	MANE_select
ENST00000650724.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000263278.9	MANE_select
ENST00000263265.11	MANE_select
ENST00000221399.8	MANE_select
ENST00000522945.5	alternative 5' UTR
ENST00000405315.9	MANE_select
ENST00000407032.5	alternative 3' UTR
ENST00000411700.5	alternative 5' UTR
ENST00000451312.5	alternative 5' UTR
ENST00000221403.7	MANE_select
ENST00000345358.12	MANE_select
ENST00000415969.6	NP_620119.2
ENST00000599784.1	CAGE supported TSS
ENST00000331825.11	MANE_select
ENST00000323798.8	MANE_select
ENST00000457974.1	NMD likely if extended
ENST00000595090.6	MANE_select
ENST00000649238.3	CAGE supported TSS
ENST00000649238.3	LR annotation
ENST00000649238.3	MANE_select
ENST00000600007.1	CAGE supported TSS
ENST00000604577.1	overlapping uORF
ENST00000359342.7	MANE_select
ENST00000359342.7	overlapping uORF
ENST00000301407.8	MANE_select
ENST00000301407.8	overlapping uORF
ENST00000301408.7	MANE_select
ENST00000595857.5	alternative 5' UTR
ENST00000598441.6	MANE_select
ENST00000221459.7	MANE_select
ENST00000408991.4	MANE_select
ENST00000334186.9	MANE_select
ENST00000602509.5	alternative 5' UTR
ENST00000602351.5	confirm experimentally
ENST00000602848.5	alternative 3' UTR
ENST00000602897.1	alternative 3' UTR
ENST00000252825.9	MANE_select
ENST00000595625.1	not organism-supported
ENST00000252826.10	MANE_select
ENST00000601347.1	NMD likely if extended
ENST00000335875.9	MANE_select
ENST00000358234.5	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000358234.5	CAGE supported TSS
ENST00000602554.1	CAGE supported TSS
ENST00000597033.5	NMD likely if extended
ENST00000426897.6	NP_001035120.1
ENST00000323906.9	MANE_select
ENST00000596426.5	NMD likely if extended
ENST00000597602.1	alternative 5' UTR
ENST00000598810.5	alternative 5' UTR
ENST00000601519.5	alternative 5' UTR
ENST00000593945.6	MANE_select
ENST00000598397.1	NMD likely if extended
ENST00000596757.1	alternative 5' UTR
ENST00000221498.7	MANE_select
ENST00000660123.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660123.1	Assembled from SLRseq reads (SRP049776)
ENST00000657688.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000447857.8	MANE_select
ENST00000594043.5	alternative 5' UTR
ENST00000270631.2	MANE_select
ENST00000576655.5	NM_001195256.1
ENST00000610896.3	MANE_select
ENST00000221485.8	MANE_select
ENST00000262265.10	MANE_select
ENST00000602226.5	NMD likely if extended
ENST00000598889.5	NAGNAG splice site
ENST00000596049.5	alternative 5' UTR
ENST00000601825.1	alternative 5' UTR
ENST00000293350.9	MANE_select
ENST00000598015.1	NMD likely if extended
ENST00000597551.6	MANE_select
ENST00000600429.5	alternative 3' UTR
ENST00000594009.5	alternative 3' UTR
ENST00000594009.5	alternative 5' UTR
ENST00000595510.1	alternative 3' UTR
ENST00000595815.1	NMD likely if extended
ENST00000391857.9	MANE_select
ENST00000477613.6	NMD likely if extended
ENST00000270625.7	MANE_select
ENST00000598491.5	alternative 5' UTR
ENST00000221466.10	MANE_select
ENST00000426395.7	alternative 5' UTR
ENST00000595677.5	NMD likely if extended
ENST00000600273.5	alternative 5' UTR
ENST00000594823.5	NMD likely if extended
ENST00000270645.8	MANE_select
ENST00000593644.1	NMD likely if extended
ENST00000596358.6	MANE_select
ENST00000599537.5	alternative 5' UTR
ENST00000598544.1	alternative 5' UTR
ENST00000596877.5	alternative 5' UTR
ENST00000246794.10	MANE_select
ENST00000418929.7	MANE_select
ENST00000418929.7	confirm experimentally
ENST00000246792.4	MANE_select
ENST00000360565.8	MANE_select
ENST00000598359.5	alternative 5' UTR
ENST00000601038.5	alternative 5' UTR
ENST00000599680.1	NMD likely if extended
ENST00000309877.11	alternative 5' UTR
ENST00000377139.8	MANE_select
ENST00000597198.5	alternative 5' UTR
ENST00000596756.5	alternative 5' UTR
ENST00000602190.1	NMD likely if extended
ENST00000598108.5	alternative 5' UTR
ENST00000601809.5	alternative 5' UTR
ENST00000600453.1	alternative 5' UTR
ENST00000441864.6	NAGNAG splice site
ENST00000246784.8	CAGE supported TSS
ENST00000246784.8	MANE_select
ENST00000594157.5	CAGE supported TSS
ENST00000598979.5	CAGE supported TSS
ENST00000529284.5	alternative 5' UTR
ENST00000527382.5	alternative 5' UTR
ENST00000534465.6	alternative 5' UTR
ENST00000454376.7	MANE_select
ENST00000526224.5	alternative 5' UTR
ENST00000420022.3	NP_001094810.1
ENST00000392518.8	alternative 5' UTR
ENST00000598293.6	MANE_select
ENST00000598293.6	alternative 5' UTR
ENST00000598396.5	alternative 5' UTR
ENST00000598714.5	NMD likely if extended
ENST00000602019.5	alternative 5' UTR
ENST00000594587.5	alternative 5' UTR
ENST00000246801.8	MANE_select
ENST00000354293.10	MANE_select
ENST00000354293.10	non canonical U12
ENST00000600199.1	NMD likely if extended
ENST00000359032.9	confirm experimentally
ENST00000359032.9	non canonical U12
ENST00000597774.5	non canonical U12
ENST00000594838.1	non canonical U12
ENST00000313777.9	MANE_select
ENST00000534008.5	NMD likely if extended
ENST00000526575.1	NMD likely if extended
ENST00000312865.10	MANE_select
ENST00000594151.5	NMD exception
ENST00000600603.5	NMD exception
ENST00000601638.5	NMD exception
ENST00000599732.5	NMD exception
ENST00000601675.5	NMD exception
ENST00000601675.5	alternative 3' UTR
ENST00000601093.5	NMD exception
ENST00000597730.1	NMD exception
ENST00000322344.8	MANE_select
ENST00000596014.5	alternative 5' UTR
ENST00000600573.5	Genoscope mRNA only
ENST00000600573.5	confirm experimentally
ENST00000599543.3	alternative 5' UTR
ENST00000596726.3	alternative 5' UTR
ENST00000598020.3	alternative 5' UTR
ENST00000637897.1	CAGE supported TSS
ENST00000595792.1	NMD likely if extended
ENST00000636994.1	alternative 5' UTR
ENST00000638016.1	alternative 5' UTR
ENST00000391833.5	alternative 5' UTR
ENST00000391832.7	alternative 5' UTR
ENST00000344175.10	MANE_select
ENST00000391831.5	alternative 5' UTR
ENST00000391830.1	alternative 5' UTR
ENST00000221543.10	MANE_select
ENST00000391826.7	MANE_select
ENST00000595948.5	alternative 5' UTR
ENST00000596022.5	alternative 5' UTR
ENST00000596011.1	alternative 5' UTR
ENST00000352066.8	MANE_select
ENST00000422090.2	alternative 5' UTR
ENST00000597029.5	alternative 5' UTR
ENST00000596217.1	alternative 5' UTR
ENST00000593652.5	alternative 5' UTR
ENST00000595761.1	alternative 5' UTR
ENST00000599567.5	alternative 5' UTR
ENST00000600645.1	alternative 5' UTR
ENST00000596437.5	alternative 5' UTR
ENST00000594673.5	alternative 5' UTR
ENST00000599788.1	alternative 5' UTR
ENST00000600935.1	alternative 5' UTR
ENST00000596680.5	alternative 5' UTR
ENST00000595125.5	alternative 5' UTR
ENST00000597227.5	alternative 5' UTR
ENST00000596658.1	alternative 5' UTR
ENST00000447370.6	MANE_select
ENST00000426971.2	confirm experimentally
ENST00000316763.8	MANE_select
ENST00000599538.5	alternative 5' UTR
ENST00000424804.6	NMD likely if extended
ENST00000597215.5	alternative 5' UTR
ENST00000596445.5	alternative 5' UTR
ENST00000601324.1	alternative 5' UTR
ENST00000599138.5	NMD likely if extended
ENST00000598809.5	alternative 5' UTR
ENST00000595661.5	alternative 5' UTR
ENST00000270617.8	MANE_select
ENST00000270617.8	genebuild_only_MANE
ENST00000599155.1	alternative 5' UTR
ENST00000655988.1	Assembled from SLRseq reads (SRP049776)
ENST00000600998.1	not best-in-genome evidence
ENST00000660128.1	Assembled from SLRseq reads (SRP049776)
ENST00000598205.5	NP_001070654.1
ENST00000598205.5	confirm experimentally
ENST00000642316.2	LR annotation
ENST00000642316.2	MANE_select
ENST00000599920.5	alternative 5' UTR
ENST00000642980.1	alternative 5' UTR
ENST00000596571.5	confirm experimentally
ENST00000477616.2	MANE_select
ENST00000600355.5	alternative 5' UTR
ENST00000652203.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000253727.10	MANE_select
ENST00000597790.5	alternative 5' UTR
ENST00000597130.5	alternative 5' UTR
ENST00000593926.5	alternative 5' UTR
ENST00000597157.1	alternative 5' UTR
ENST00000253719.7	MANE_select
ENST00000599857.7	LR annotation
ENST00000601098.6	alternative 5' UTR
ENST00000440232.7	MANE_select
ENST00000440232.7	NAGNAG splice site
ENST00000440232.7	alternative 5' UTR
ENST00000595904.6	CAGE supported TSS
ENST00000595904.6	LR annotation
ENST00000593887.1	alternative 5' UTR
ENST00000599632.1	not organism-supported
ENST00000595883.6	MANE_select
ENST00000357701.6	MANE_select
ENST00000595790.5	upstream ATG
ENST00000600100.6	MANE_select
ENST00000334976.11	MANE_select
ENST00000601423.5	NAGNAG splice site
ENST00000601423.5	alternative 5' UTR
ENST00000598418.6	MANE_select
ENST00000594350.1	alternative 5' UTR
ENST00000389208.9	MANE_select
ENST00000597030.1	NMD likely if extended
ENST00000652263.1	MANE_select
ENST00000652263.1	genebuild_only_MANE
ENST00000600381.1	alternative 5' UTR
ENST00000338916.8	alternative 5' UTR
ENST00000600079.6	MANE_select
ENST00000600079.6	alternative 5' UTR
ENST00000598997.1	alternative 5' UTR
ENST00000425202.6	MANE_select
ENST00000425202.6	confirm experimentally
ENST00000293441.6	CAGE supported TSS
ENST00000293441.6	MANE_select
ENST00000359082.3	confirm experimentally
ENST00000250340.9	MANE_select
ENST00000270590.4	MANE_select
ENST00000562076.2	MANE_select
ENST00000636757.1	overlapping uORF
ENST00000270593.2	AB463389.1, BC140294.1, BC146506.1
ENST00000270593.2	MANE_select
ENST00000598463.5	alternative 5' UTR
ENST00000596655.1	alternative 5' UTR
ENST00000597493.5	alternative 5' UTR
ENST00000301420.3	MANE_select
ENST00000326856.8	NAGNAG splice site
ENST00000596931.5	NAGNAG splice site
ENST00000326003.7	MANE_select
ENST00000596950.5	NMD likely if extended
ENST00000325321.8	MANE_select
ENST00000599568.1	alternative 5' UTR
ENST00000336334.8	MANE_select
ENST00000391809.6	alternative 5' UTR
ENST00000593428.5	alternative 5' UTR
ENST00000594846.1	alternative 5' UTR
ENST00000376851.7	alternative 5' UTR
ENST00000310157.7	MANE_select
ENST00000594641.1	alternative 5' UTR
ENST00000594641.1	upstream ATG
ENST00000671133.1	Assembled from SLRseq reads (SRP049776)
ENST00000595820.6	MANE_select
ENST00000593904.1	alternative 5' UTR
ENST00000595638.1	NMD likely if extended
ENST00000593490.1	confirm experimentally
ENST00000595238.1	alternative 5' UTR
ENST00000594211.2	AB463811.1, BC140229.1, BC141613.1
ENST00000594211.2	MANE_select
ENST00000594211.2	confirm experimentally
ENST00000358789.8	MANE_select
ENST00000358789.8	alternative 5' UTR
ENST00000599077.1	alternative 5' UTR
ENST00000453757.8	MANE_select
ENST00000453757.8	alternative 5' UTR
ENST00000391804.7	NP_001161077.1
ENST00000598799.5	alternative 5' UTR
ENST00000594458.1	NMD likely if extended
ENST00000601671.1	alternative 5' UTR
ENST00000529888.5	NP_665902
ENST00000250351.4	NP_665901.1
ENST00000595793.6	MANE_select
ENST00000376799.9	alternative 3' UTR
ENST00000156499.7	upstream ATG
ENST00000650543.2	CAGE supported TSS
ENST00000650543.2	MANE_select
ENST00000650543.2	alternative 5' UTR
ENST00000650543.2	upstream ATG
ENST00000421832.3	MANE_select
ENST00000250360.8	MANE_select
ENST00000440804.7	NP_001185487.1
ENST00000317643.10	MANE_select
ENST00000421133.6	NP_001076087.1
ENST00000262262.5	MANE_select
ENST00000391796.7	NP_001171079.1
ENST00000597610.5	alternative 5' UTR
ENST00000601727.5	alternative 5' UTR
ENST00000335624.4	confirm experimentally
ENST00000309244.9	MANE_select
ENST00000291715.5	MANE_select
ENST00000291715.5	alternative 5' UTR
ENST00000221978.10	MANE_select
ENST00000596399.2	MANE_select
ENST00000574814.2	MANE_select
ENST00000574814.2	NP_001180552.1
ENST00000339313.10	MANE_select
ENST00000442846.7	NP_001164632.1
ENST00000436984.6	NP_001164629.1
ENST00000430817.5	alternative 3' UTR
ENST00000321424.7	MANE_select
ENST00000396477.4	confirm experimentally
ENST00000291707.8	MANE_select
ENST00000425629.8	MANE_select
ENST00000346477.7	confirm experimentally
ENST00000359982.8	NP_001171019
ENST00000436458.5	NP_001171018.1
ENST00000262259.7	MANE_select
ENST00000596504.1	NMD likely if extended
ENST00000534261.3	confirm experimentally
ENST00000646845.1	CAGE supported TSS
ENST00000637797.2	MANE_select
ENST00000222115.5	NAGNAG splice site
ENST00000540069.7	MANE_select
ENST00000540069.7	NAGNAG splice site
ENST00000594621.1	confirm experimentally
ENST00000595042.5	alternative 5' UTR
ENST00000304748.5	MANE_select
ENST00000600815.1	alternative 5' UTR
ENST00000594900.1	alternative 5' UTR
ENST00000600258.1	alternative 5' UTR
ENST00000340023.7	MANE_select
ENST00000599326.1	alternative 5' UTR
ENST00000598953.1	alternative 5' UTR
ENST00000598776.1	alternative 5' UTR
ENST00000600722.1	alternative 5' UTR
ENST00000651321.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000339223.5	MANE_select
ENST00000595991.1	alternative 5' UTR
ENST00000301399.11	NP_116068.2
ENST00000639636.1	alternative 5' UTR
ENST00000451628.8	NP_001129062.1
ENST00000638348.1	alternative 5' UTR
ENST00000638325.1	alternative 5' UTR
ENST00000638814.1	alternative 5' UTR
ENST00000638538.1	alternative 5' UTR
ENST00000638423.1	alternative 5' UTR
ENST00000640429.1	alternative 5' UTR
ENST00000354957.8	MANE_select
ENST00000595418.5	alternative 5' UTR
ENST00000599683.5	alternative 5' UTR
ENST00000293471.11	MANE_select
ENST00000600853.1	alternative 5' UTR
ENST00000658402.1	Assembled from SLRseq reads (SRP049776)
ENST00000661211.1	Assembled from SLRseq reads (SRP049776)
ENST00000595010.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000243644.9	MANE_select
ENST00000594929.5	alternative 5' UTR
ENST00000597788.5	alternative 5' UTR
ENST00000593596.1	alternative 5' UTR
ENST00000602063.5	alternative 5' UTR
ENST00000598071.6	MANE_select
ENST00000594083.5	alternative 5' UTR
ENST00000376716.9	NP_940882.3
ENST00000599631.5	alternative 5' UTR
ENST00000270649.11	MANE_select
ENST00000597952.1	alternative 5' UTR
ENST00000221315.10	MANE_select
ENST00000594154.5	alternative 5' UTR
ENST00000600368.5	alternative 5' UTR
ENST00000598745.5	alternative 5' UTR
ENST00000601310.1	alternative 5' UTR
ENST00000614138.1	CAGE supported TSS
ENST00000594295.5	NP_001129971.1
ENST00000594440.5	alternative 5' UTR
ENST00000600228.6	MANE_select
ENST00000600282.1	alternative 5' UTR
ENST00000598982.5	NMD likely if extended
ENST00000594362.1	NMD likely if extended
ENST00000596428.5	alternative 5' UTR
ENST00000322088.11	MANE_select
ENST00000439461.6	MANE_select
ENST00000595962.6	MANE_select
ENST00000595962.6	NP_653285.2
ENST00000468240.6	non canonical U12
ENST00000403906.8	MANE_select
ENST00000403906.8	alternative 5' UTR
ENST00000593698.5	alternative 5' UTR
ENST00000327920.12	alternative 5' UTR
ENST00000422689.3	MANE_select
ENST00000656846.1	Assembled from SLRseq reads (SRP049776)
ENST00000663140.1	Assembled from SLRseq reads (SRP049776)
ENST00000598892.2	Assembled from SLRseq reads (SRP049776)
ENST00000360465.8	MANE_select
ENST00000391787.6	alternative 5' UTR
ENST00000421239.7	MANE_select
ENST00000421239.7	not best-in-genome evidence
ENST00000601120.1	alternative 5' UTR
ENST00000487863.5	The fourth exon of this variant overlaps a ribosomal protein L39 (RPL39) pseudogene annotated as OTTHUMG00000158225.  No independent transcript from the ZNF808 gene can be made for the pseudogene
ENST00000465448.5	alternative 5' UTR
ENST00000359798.9	MANE_select
ENST00000461779.5	alternative 5' UTR
ENST00000461321.1	alternative 5' UTR
ENST00000391785.8	MANE_select
ENST00000597597.1	alternative 5' UTR
ENST00000541777.6	alternative 5' UTR
ENST00000595171.5	NMD likely if extended
ENST00000596440.5	NMD likely if extended
ENST00000652185.1	MANE_select
ENST00000652185.1	genebuild_only_MANE
ENST00000602162.5	NP_001154973.1
ENST00000595798.5	alternative 5' UTR
ENST00000601643.5	alternative 5' UTR
ENST00000640952.1	alternative 5' UTR
ENST00000457749.7	MANE_select
ENST00000457749.7	NM_006969.3
ENST00000438150.2	alternative 5' UTR
ENST00000595646.6	MANE_select
ENST00000595635.5	upstream uORF
ENST00000593618.5	alternative 5' UTR
ENST00000594741.5	alternative 5' UTR
ENST00000597265.5	alternative 5' UTR
ENST00000597111.5	alternative 5' UTR
ENST00000357666.8	alternative 5' UTR
ENST00000444460.7	MANE_select
ENST00000457013.6	alternative 5' UTR
ENST00000652240.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000651287.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000270443.8	DKFZp686I0252, FLJ35274
ENST00000270443.8	novel transcript
ENST00000601417.3	MANE_select
ENST00000601417.3	NP_001177984.1
ENST00000601417.3	not best-in-genome evidence
ENST00000599247.5	upstream uORF
ENST00000599637.5	alternative 5' UTR
ENST00000421033.5	align_id:3639888|asmbl_130053
ENST00000500065.8	NP_001129510.2
ENST00000601110.5	alternative 5' UTR
ENST00000596683.5	NMD likely if extended
ENST00000594286.5	NMD likely if extended
ENST00000596051.1	alternative 5' UTR
ENST00000334197.12	MANE_select
ENST00000601469.2	NP_001166145.1
ENST00000599096.1	alternative 5' UTR
ENST00000396424.5	MANE_select
ENST00000600412.1	not organism-supported
ENST00000650736.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000650736.1	upstream ATG
ENST00000598513.6	MANE_select
ENST00000594517.5	alternative 5' UTR
ENST00000341702.3	MANE_select
ENST00000595091.6	upstream uORF
ENST00000458035.3	MANE_select
ENST00000458035.3	alternative 5' UTR
ENST00000474037.6	MANE_select
ENST00000474037.6	not best-in-genome evidence
ENST00000467003.1	The 3' UTR this putative zinc finger protein 525 ZNF525 overlaps a ribosomal protein L39 (RPL39) pseudogene annotated as OTTHUMG00000158259.  No independent transcript from the ZNF525 gene can be made for the pseudogene
ENST00000459631.1	This pseudogene overlaps the 3' UTR of putative zinc finger protein 525 ZNF525 annotated as OTTHUMG00000158277.  No independent transcript from the ZNF525 gene can be made for this pseudogene
ENST00000396408.8	MANE_select
ENST00000651864.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000432094.6	upstream uORF
ENST00000657048.1	Assembled from RACEseq reads
ENST00000396403.9	MANE_select
ENST00000396403.9	The 3' UTR this zinc finger protein 813 ZNF813 overlaps a ribosomal protein L39 (RPL39) pseudogene annotated as OTTHUMG00000158303.  No independent transcript from the ZNF813 gene can be made for the pseudogene
ENST00000483735.1	This pseudogene overlaps the 3' UTR of  zinc finger protein 813 ZNF813 annotated as OTTHUMG00000158309.  No independent transcript from the ZNF813 gene can be made for this pseudogene
ENST00000648236.1	alternative 5' UTR
ENST00000253144.13	alternative 5' UTR
ENST00000649326.1	alternative 5' UTR
ENST00000502248.5	alternative 5' UTR
ENST00000511593.6	alternative 5' UTR
ENST00000514374.5	alternative 5' UTR
ENST00000449416.6	CAGE supported TSS
ENST00000449416.6	MANE_select
ENST00000449416.6	alternative 5' UTR
ENST00000509585.5	alternative 5' UTR
ENST00000648122.1	LR 3' extension
ENST00000648122.1	LR annotation
ENST00000648122.1	alternative 5' UTR
ENST00000513999.5	alternative 5' UTR
ENST00000512387.6	alternative 5' UTR
ENST00000511567.5	alternative 5' UTR
ENST00000505949.5	alternative 5' UTR
ENST00000513265.5	alternative 5' UTR
ENST00000648511.1	LR 3' extension
ENST00000648511.1	LR annotation
ENST00000648511.1	alternative 5' UTR
ENST00000502616.5	alternative 5' UTR
ENST00000648397.1	alternative 5' UTR
ENST00000504493.6	alternative 5' UTR
ENST00000505426.1	alternative 5' UTR
ENST00000324134.11	CAGE supported TSS
ENST00000324134.11	MANE_select
ENST00000345770.9	AY116205.1
ENST00000345770.9	non canonical TEC
ENST00000391772.1	non canonical TEC
ENST00000336967.8	alternative 5' UTR
ENST00000421337.6	alternative 5' UTR
ENST00000651087.1	alternative 5' UTR
ENST00000391770.9	MANE_select
ENST00000414489.1	not organism-supported
ENST00000263431.4	MANE_select
ENST00000391767.6	MANE_select
ENST00000270458.4	MANE_select
ENST00000270458.4	Translation start site is non-ATG (supported by Chu et al. Gene 280 (2001) 37-48 on the basis of conservation with mouse and rat)
ENST00000252729.7	MANE_select
ENST00000338372.7	MANE_select
ENST00000432826.2	MANE_select
ENST00000485876.6	MANE_select
ENST00000391759.6	MANE_select
ENST00000321030.9	MANE_select
ENST00000391755.1	GENCODE experimental pipeline
ENST00000498612.1	NMD likely if extended
ENST00000644245.1	NAGNAG splice site
ENST00000646002.1	NAGNAG splice site
ENST00000221232.11	MANE_select
ENST00000440571.6	NAGNAG splice site
ENST00000358389.7	alternative 5' UTR
ENST00000222224.4	MANE_select
ENST00000619895.5	MANE_select
ENST00000245615.6	MANE_select
ENST00000429671.7	upstream ATG
ENST00000665674.2	alternative 5' UTR
ENST00000396388.3	MANE_select
ENST00000302907.9	MANE_select
ENST00000245620.13	NAGNAG splice site
ENST00000449561.3	MANE_select
ENST00000595133.1	sequence error
ENST00000314446.10	MANE_select
ENST00000314446.10	alternative 5' UTR
ENST00000314446.10	alternatively spliced in 5' UTR, shares CDS with AC010518.1-001
ENST00000432233.8	MANE_select
ENST00000486742.2	CCDS12889.1
ENST00000291759.5	MANE_select
ENST00000391742.7	MANE_select
ENST00000391743.7	FLJ40550
ENST00000475389.5	FLJ36240
ENST00000376530.8	MANE_select
ENST00000391739.7	FLJ44736
ENST00000652740.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000439657.5	alternative 5' UTR
ENST00000326764.10	MANE_select
ENST00000436479.1	not organism-supported
ENST00000443957.5	alternative 5' UTR
ENST00000611161.2	MANE_select
ENST00000611161.2	NP_945339.2
ENST00000301200.3	MANE_select
ENST00000301202.7	MANE_select
ENST00000611588.1	novel transcript FLJ00060
ENST00000439534.5	alternative 5' UTR
ENST00000391738.8	MANE_select
ENST00000391738.8	genebuild_only_MANE
ENST00000251376.7	FLJ26660
ENST00000251372.8	MANE_select
ENST00000462628.5	FLJ37515
ENST00000430952.6	CAGE supported TSS
ENST00000391734.7	CAGE supported TSS
ENST00000391733.7	CAGE supported TSS
ENST00000391733.7	NAGNAG splice site
ENST00000434286.1	CAGE supported TSS
ENST00000461262.1	NMD likely if extended
ENST00000342376.4	MANE_select
ENST00000336077.11	MANE_select
ENST00000486965.6	non canonical TEC
ENST00000326321.7	MANE_select
ENST00000355524.8	MANE_select
ENST00000472634.6	non canonical TEC
ENST00000482092.6	non canonical TEC
ENST00000471750.2	non canonical TEC
ENST00000291890.9	MANE_select
ENST00000594765.5	NMD exception
ENST00000588756.5	alternative 5' UTR
ENST00000588756.5	downstream ATG
ENST00000587844.1	alternative 5' UTR
ENST00000587103.5	alternative 5' UTR
ENST00000590659.1	alternative 5' UTR
ENST00000588619.5	alternative 5' UTR
ENST00000588107.5	alternative 5' UTR
ENST00000433772.6	alternative 5' UTR
ENST00000448584.7	MANE_select
ENST00000448584.7	genebuild_only_MANE
ENST00000310373.7	MANE_select
ENST00000591960.1	NAGNAG splice site
ENST00000415061.8	MANE_select
ENST00000587721.1	upstream uORF
ENST00000586945.5	alternative 5' UTR
ENST00000587026.1	alternative 5' UTR
ENST00000201647.11	MANE_select
ENST00000591938.5	NAGNAG splice site
ENST00000263433.8	MANE_select
ENST00000666966.1	Assembled from SLRseq reads (SRP049776)
ENST00000653659.1	Assembled from SLRseq reads (SRP049776)
ENST00000588981.6	MANE_select
ENST00000587758.5	alternative 5' UTR
ENST00000588426.5	upstream uORF
ENST00000593046.5	alternative 5' UTR
ENST00000589226.5	alternative 5' UTR
ENST00000592920.5	NMD likely if extended
ENST00000344887.10	LR annotation
ENST00000344887.10	MANE_select
ENST00000587871.1	overlapping uORF
ENST00000527223.6	downstream ATG
ENST00000391720.8	downstream ATG
ENST00000524407.7	MANE_select
ENST00000524407.7	alternative 5' UTR
ENST00000588076.1	overlapping uORF
ENST00000526003.5	upstream uORF
ENST00000534170.5	upstream uORF
ENST00000532817.5	upstream uORF
ENST00000528476.1	NMD likely if extended
ENST00000591665.1	SnoRNA host
ENST00000354308.8	MANE_select
ENST00000589172.5	alternative 5' UTR
ENST00000592470.1	alternative 5' UTR
ENST00000376350.8	MANE_select
ENST00000651492.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000327042.5	MANE_select
ENST00000412770.7	MANE_select
ENST00000587283.5	alternative 5' UTR
ENST00000592242.1	alternative 5' UTR
ENST00000433386.7	MANE_select
ENST00000433386.7	NAGNAG splice site
ENST00000433386.7	alternative 5' UTR
ENST00000255631.9	NAGNAG splice site
ENST00000587922.5	alternative 5' UTR
ENST00000593263.5	NAGNAG splice site
ENST00000593263.5	alternative 5' UTR
ENST00000585698.1	alternative 5' UTR
ENST00000588971.1	NAGNAG splice site
ENST00000588971.1	alternative 5' UTR
ENST00000587551.1	NAGNAG splice site
ENST00000309383.6	MANE_select
ENST00000326652.9	MANE_select
ENST00000591570.5	alternative 5' UTR
ENST00000621389.1	CAGE supported TSS
ENST00000255613.8	MANE_select
ENST00000402499.6	NMD likely if extended
ENST00000588572.6	NMD exception
ENST00000588572.6	alternative 3' UTR
ENST00000588572.6	non canonical TEC
ENST00000326529.9	MANE_select
ENST00000326529.9	NMD exception
ENST00000593184.5	NMD exception
ENST00000593184.5	alternative 3' UTR
ENST00000590900.5	NMD exception
ENST00000590900.5	alternative 3' UTR
ENST00000589467.1	alternative 3' UTR
ENST00000424985.3	MANE_select
ENST00000424985.3	confirm experimentally
ENST00000264563.7	MANE_select
ENST00000264563.7	alternative 3' UTR
ENST00000590625.5	upstream uORF
ENST00000291934.4	MANE_select
ENST00000444469.4	MANE_select
ENST00000444469.4	upstream ATG
ENST00000344063.7	MANE_select
ENST00000559463.5	alternative 5' UTR
ENST00000558131.1	not organism-supported
ENST00000264552.14	MANE_select
ENST00000376325.9	confirm experimentally
ENST00000425675.7	MANE_select
ENST00000587226.5	alternative 5' UTR
ENST00000589080.1	alternative 5' UTR
ENST00000589080.1	upstream ATG
ENST00000598519.2	MANE_select
ENST00000205194.5	MANE_select
ENST00000594321.5	alternative 5' UTR
ENST00000389623.11	MANE_select
ENST00000413299.6	MANE_select
ENST00000612221.1	MANE_select
ENST00000325421.7	MANE_select
ENST00000592239.1	alternative 5' UTR
ENST00000221665.5	MANE_select
ENST00000590714.1	alternative 5' UTR
ENST00000587414.1	alternative 5' UTR
ENST00000589521.1	alternative 5' UTR
ENST00000301073.4	MANE_select
ENST00000591046.1	alternative 5' UTR
ENST00000568956.2	MANE_select
ENST00000568956.2	confirm experimentally
ENST00000325351.5	MANE_select
ENST00000592881.1	downstream ATG
ENST00000590190.1	alternative 5' UTR
ENST00000325333.10	MANE_select
ENST00000543039.2	alternative 5' UTR
ENST00000592461.5	alternative 5' UTR
ENST00000587252.5	alternative 5' UTR
ENST00000585995.1	alternative 5' UTR
ENST00000270451.6	MANE_select
ENST00000588537.1	alternative 5' UTR
ENST00000593069.1	alternative 5' UTR
ENST00000586790.6	MANE_select
ENST00000586790.6	alternative 5' UTR
ENST00000588740.5	alternative 5' UTR
ENST00000591578.5	alternative 5' UTR
ENST00000308924.9	MANE_select
ENST00000270460.11	MANE_select
ENST00000332836.7	MANE_select
ENST00000434937.2	upstream ATG
ENST00000341750.5	MANE_select
ENST00000341750.5	not best-in-genome evidence
ENST00000530883.1	not best-in-genome evidence
ENST00000589824.6	confirm experimentally
ENST00000593208.1	alternative 5' UTR
ENST00000301295.11	MANE_select
ENST00000587464.1	alternative 5' UTR
ENST00000291971.7	MANE_select
ENST00000390649.8	MANE_select
ENST00000597673.1	not organism-supported
ENST00000610935.2	MANE_select
ENST00000587467.5	alternative 5' UTR
ENST00000588358.5	alternative 5' UTR
ENST00000337080.8	MANE_select
ENST00000586123.5	alternative 5' UTR
ENST00000592949.5	NAGNAG splice site
ENST00000592949.5	alternative 5' UTR
ENST00000593100.5	alternative 5' UTR
ENST00000588203.1	alternative 5' UTR
ENST00000591564.1	alternative 5' UTR
ENST00000357330.7	MANE_select
ENST00000586855.6	align_id:1329423|asmbl_49326
ENST00000534327.6	not best-in-genome evidence
ENST00000587340.5	alternative 5' UTR
ENST00000587492.5	upstream ATG
ENST00000593106.5	upstream ATG
ENST00000592509.5	alternative 5' UTR
ENST00000588955.5	alternative 5' UTR
ENST00000588442.5	alternative 5' UTR
ENST00000592679.5	alternative 5' UTR
ENST00000649256.2	MANE_select
ENST00000651636.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000589143.5	RNA-seq supported:
ENST00000586929.5	upstream ATG
ENST00000587778.5	upstream ATG
ENST00000589895.1	alternative 5' UTR
ENST00000651165.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000663112.1	Assembled from RACEseq reads
ENST00000537943.5	alternative 5' UTR
ENST00000333201.13	MANE_select
ENST00000391778.3	alternative 5' UTR
ENST00000504904.8	MANE_select
ENST00000504904.8	alternative 5' UTR
ENST00000587555.5	alternative 5' UTR
ENST00000589946.1	alternative 5' UTR
ENST00000670294.1	Assembled from SLRseq reads (SRP049776)
ENST00000586822.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654200.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664785.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661902.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000586091.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000594783.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000592146.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000592146.3	Assembled from SLRseq reads (SRP049776)
ENST00000654382.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000588158.2	Assembled from SLRseq reads (SRP049776)
ENST00000669162.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665045.1	Assembled from SLRseq reads (SRP049776)
ENST00000667367.1	Assembled from SLRseq reads (SRP049776)
ENST00000308031.10	MANE_select
ENST00000591759.1	alternative 5' UTR
ENST00000301318.8	MANE_select
ENST00000670254.1	Assembled from SLRseq reads (SRP049776)
ENST00000330619.13	MANE_select
ENST00000599599.7	MANE_select
ENST00000598409.6	MANE_select
ENST00000537055.4	MANE_select
ENST00000601659.1	alternative 5' UTR
ENST00000651169.1	non canonical polymorphism
ENST00000593711.6	CAGE supported TSS
ENST00000593711.6	CARS
ENST00000593711.6	LR annotation
ENST00000601070.5	alternative 5' UTR
ENST00000599935.5	alternative 5' UTR
ENST00000648694.1	CAGE supported TSS
ENST00000648694.1	LR annotation
ENST00000648694.1	alternative 5' UTR
ENST00000326441.15	CAGE supported TSS
ENST00000326441.15	LR annotation
ENST00000326441.15	MANE_select
ENST00000649233.1	alternative 5' UTR
ENST00000649680.1	alternative 5' UTR
ENST00000649876.1	alternative 5' UTR
ENST00000649428.1	alternative 5' UTR
ENST00000650632.1	alternative 5' UTR
ENST00000650102.1	alternative 5' UTR
ENST00000599534.5	alternative 5' UTR
ENST00000599577.5	alternative 5' UTR
ENST00000647852.1	alternative 5' UTR
ENST00000594389.1	alternative 5' UTR
ENST00000652034.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000600020.5	alternative 5' UTR
ENST00000600940.1	alternative 5' UTR
ENST00000598197.1	alternative 5' UTR
ENST00000269834.1	MANE_select
ENST00000554048.3	MANE_select
ENST00000554048.3	not best-in-genome evidence
ENST00000263095.10	MANE_select
ENST00000594126.1	alternative 5' UTR
ENST00000302804.12	MANE_select
ENST00000414468.3	MANE_select
ENST00000414468.3	not best-in-genome evidence
ENST00000671172.1	Assembled from SLRseq reads (SRP049776)
ENST00000669944.1	Assembled from SLRseq reads (SRP049776)
ENST00000360338.4	MANE_select
ENST00000321545.5	MANE_select
ENST00000282286.6	MANE_select
ENST00000282282.4	MANE_select
ENST00000543226.2	MANE_select
ENST00000336128.12	MANE_select
ENST00000600421.1	NMD likely if extended
ENST00000307658.12	MANE_select
ENST00000334181.5	FLJ16360
ENST00000334181.5	MANE_select
ENST00000334181.5	NP_001018855
ENST00000356584.8	MANE_select
ENST00000356584.8	NP_001137540.1
ENST00000442920.6	NAGNAG splice site
ENST00000442920.6	non-canonical splice donor site between exons 3 and 4
ENST00000523439.1	NAGNAG splice site
ENST00000523439.1	non canonical polymorphism
ENST00000523439.1	non-canonical splice donor site between exons 3 and 4
ENST00000424930.6	NAGNAG splice site
ENST00000424930.6	NP_001091961.1
ENST00000415379.6	NP_001091966.1
ENST00000221735.12	MANE_select
ENST00000221735.12	NAGNAG splice site
ENST00000221735.12	non-canonical splice donor site between exons 4 and 5
ENST00000522346.1	non canonical polymorphism
ENST00000601674.6	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000282292.9	MANE_select
ENST00000376233.8	MANE_select
ENST00000457177.5	NMD exception
ENST00000344222.5	NMD exception
ENST00000506609.2	not organism-supported
ENST00000196489.4	MANE_select
ENST00000597850.2	MANE_select
ENST00000396161.10	MANE_select
ENST00000600883.1	alternative 5' UTR
ENST00000240731.5	MANE_select
ENST00000282296.10	MANE_select
ENST00000599402.1	NMD likely if extended
ENST00000512439.6	KIAA2003
ENST00000512439.6	NMD exception
ENST00000317398.10	MANE_select
ENST00000594803.1	NMD likely if extended
ENST00000599961.1	NMD likely if extended
ENST00000317178.10	MANE_select
ENST00000317178.10	NP_775903.3
ENST00000651718.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000396154.7	MANE_select
ENST00000391701.1	MANE_select
ENST00000597134.5	alternative 5' UTR
ENST00000596498.2	NAGNAG splice site
ENST00000596498.2	alternative 5' UTR
ENST00000603271.1	NAGNAG splice site
ENST00000651253.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000442832.8	non canonical U12
ENST00000594901.2	CAGE supported TSS
ENST00000594901.2	MANE_select
ENST00000594629.1	NMD likely if extended
ENST00000435989.7	MANE_select
ENST00000339656.8	MANE_select
ENST00000312026.6	MANE_select
ENST00000598629.5	alternative 5' UTR
ENST00000599251.1	alternative 5' UTR
ENST00000396147.6	MANE_select
ENST00000396147.6	NMD exception
ENST00000396147.6	PMID:18084723, Li Y et al Mol Cell Biochem. 2008 Mar;310
ENST00000595830.5	NMD exception
ENST00000595830.5	PMID:18084723, Li Y et al Mol Cell Biochem. 2008 Mar;310
ENST00000595830.5	alternative 5' UTR
ENST00000425570.7	NMD exception
ENST00000425570.7	PMID:18084723, Li Y et al Mol Cell Biochem. 2008 Mar;310
ENST00000601593.5	alternative 5' UTR
ENST00000593296.1	alternative 5' UTR
ENST00000282308.4	MANE_select
ENST00000314391.3	MANE_select
ENST00000551380.5	alternative 5' UTR
ENST00000547121.5	alternative 5' UTR
ENST00000552184.1	alternative 5' UTR
ENST00000668392.1	Assembled from SLRseq reads (SRP049776)
ENST00000313957.8	Assembled from SLRseq reads (SRP049776)
ENST00000666048.1	Assembled from SLRseq reads (SRP049776)
ENST00000665448.1	Assembled from SLRseq reads (SRP049776)
ENST00000663410.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000282326.6	MANE_select
ENST00000391700.5	upstream uORF
ENST00000601162.1	alternative 5' UTR
ENST00000359978.10	NP_001158002
ENST00000401053.8	NP_009065
ENST00000511556.5	NP_003427.3
ENST00000313434.10	MANE_select
ENST00000240727.10	alternative 5' UTR
ENST00000601144.6	MANE_select
ENST00000600897.5	alternative 5' UTR
ENST00000600845.1	alternative 5' UTR
ENST00000601063.1	alternative 5' UTR
ENST00000598312.6	MANE_select
ENST00000597186.5	non canonical TEC
ENST00000597186.5	upstream uORF
ENST00000500161.2	upstream uORF
ENST00000601887.1	alternative 5' UTR
ENST00000659607.1	Assembled from SLRseq reads (SRP049776)
ENST00000617501.5	MANE_select
ENST00000345813.7	NP_057409.1
ENST00000610905.4	alternative 5' UTR
ENST00000597528.1	alternative 5' UTR
ENST00000597528.1	upstream uORF
ENST00000594839.5	alternative 5' UTR
ENST00000594384.5	alternative 5' UTR
ENST00000652201.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000596825.5	alternative 5' UTR
ENST00000600220.5	alternative 5' UTR
ENST00000651034.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000621650.2	MANE_select
ENST00000621650.2	NP_066575.2
ENST00000664481.1	Assembled from SLRseq reads (SRP049776)
ENST00000634676.2	Assembled from SLRseq reads (SRP049776)
ENST00000659246.1	Assembled from SLRseq reads (SRP049776)
ENST00000671228.1	Assembled from SLRseq reads (SRP049776)
ENST00000658331.1	Assembled from SLRseq reads (SRP049776)
ENST00000669883.1	Assembled from SLRseq reads (SRP049776)
ENST00000651375.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651375.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000669440.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666049.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000329665.5	MANE_select
ENST00000263100.8	MANE_select
ENST00000670460.1	Assembled from SLRseq reads (SRP049776)
ENST00000670199.1	Assembled from SLRseq reads (SRP049776)
ENST00000311044.8	MANE_select
ENST00000311044.8	alternative 5' UTR
ENST00000595763.1	alternative 5' UTR
ENST00000599889.2	Assembled from SLRseq reads (SRP049776)
ENST00000663335.1	Assembled from SLRseq reads (SRP049776)
ENST00000427624.2	alternative 5' UTR
ENST00000597582.2	MANE_select
ENST00000596314.5	alternative 5' UTR
ENST00000196551.8	MANE_select
ENST00000196551.8	genebuild_only_MANE
ENST00000596046.1	alternative 5' UTR
ENST00000601382.2	LOC646862
ENST00000306910.9	MANE_select
ENST00000254166.4	MANE_select
ENST00000545523.5	alternative 5' UTR
ENST00000599194.5	alternative 5' UTR
ENST00000336614.9	MANE_select
ENST00000598244.5	alternative 5' UTR
ENST00000599193.5	alternative 5' UTR
ENST00000196482.4	MANE_select
ENST00000196482.4	alternative 5' UTR
ENST00000596341.5	alternative 5' UTR
ENST00000600013.5	alternative 5' UTR
ENST00000594369.6	MANE_select
ENST00000263093.7	MANE_select
ENST00000354590.7	alternative 5' UTR
ENST00000594051.6	MANE_select
ENST00000600990.1	alternative 5' UTR
ENST00000600130.1	alternative 5' UTR
ENST00000596739.1	alternative 5' UTR
ENST00000253024.10	MANE_select
ENST00000600118.5	alternative 5' UTR
ENST00000601220.5	alternative 5' UTR
ENST00000312547.7	MANE_select
ENST00000596708.1	alternative 5' UTR
ENST00000597848.1	alternative 5' UTR
ENST00000253023.8	MANE_select
ENST00000661912.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653470.1	Assembled from SLRseq reads (SRP049776)
ENST00000600534.1	LOC100131691
ENST00000215057.7	MANE_select
ENST00000599369.5	alternative 5' UTR
ENST00000596039.1	alternative 5' UTR
ENST00000652551.1	ID: align_id:3641327|asmbl_131492
ENST00000596029.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000382410.3	MANE_select
ENST00000382398.4	MANE_select
ENST00000382388.4	MANE_select
ENST00000334391.5	MANE_select
ENST00000246105.4	MANE_select
ENST00000382376.4	MANE_select
ENST00000360321.7	FLJ40075
ENST00000360321.7	MANE_select
ENST00000500893.4	MANE_select
ENST00000650993.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000657126.1	Assembled from SLRseq reads (SRP049776)
ENST00000414676.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000414676.6	novel transcript
ENST00000442637.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000442637.2	novel transcript
ENST00000662580.1	Assembled from SLRseq reads (SRP049776)
ENST00000342665.5	MANE_select
ENST00000382291.7	FLJ23329
ENST00000382285.7	MANE_select
ENST00000470439.5	alternative 5' UTR
ENST00000615226.4	alternative 5' UTR
ENST00000449710.5	alternative 5' UTR
ENST00000411647.5	alternative 5' UTR
ENST00000356286.10	MANE_select
ENST00000354200.5	FLJ45119
ENST00000354200.5	MANE_select
ENST00000680491.1	FLJ31011, DKFZp686B10111
ENST00000494633.1	FLJ37791
ENST00000217244.9	MANE_select
ENST00000217244.9	alternative 5' UTR
ENST00000643660.1	alternative 3' UTR
ENST00000645623.1	alternative 3' UTR
ENST00000645623.1	alternative 5' UTR
ENST00000646305.1	alternative 5' UTR
ENST00000642689.1	alternative 5' UTR
ENST00000646814.1	alternative 5' UTR
ENST00000646477.1	alternative 5' UTR
ENST00000644003.1	alternative 5' UTR
ENST00000400217.7	alternative 5' UTR
ENST00000643680.1	alternative 5' UTR
ENST00000460062.7	alternative 5' UTR
ENST00000643968.1	alternative 3' UTR
ENST00000609525.2	alternative 5' UTR
ENST00000645091.1	alternative 5' UTR
ENST00000608066.6	alternative 5' UTR
ENST00000646908.1	alternative 5' UTR
ENST00000643910.1	alternative 5' UTR
ENST00000381962.4	DKFZp727A181, FLJ45527
ENST00000381962.4	MANE_select
ENST00000488788.2	FLJ43353
ENST00000246104.7	MANE_select
ENST00000473664.2	novel transcript
ENST00000645534.1	LR annotation
ENST00000645534.1	MANE_select
ENST00000645534.1	alternative 5' UTR
ENST00000381944.5	CARS
ENST00000381944.5	FLJ90169
ENST00000217254.11	CAGE supported TSS
ENST00000217254.11	NMD exception
ENST00000488495.3	alternative 5' UTR
ENST00000676154.1	alternative 5' UTR
ENST00000674666.1	alternative 5' UTR
ENST00000381941.8	MANE_select
ENST00000304189.6	alternative 5' UTR
ENST00000304189.6	alternative splicing in 5' UTR, shares CDS with RP11-371L19.3-001
ENST00000381939.1	alternative 5' UTR
ENST00000381939.1	alternative splicing in 5' UTR, shares CDS with RP11-371L19.3-001
ENST00000246100.3	alternative 5' UTR
ENST00000246100.3	alternative splicing in 5' UTR, shares CDS with RP11-371L19.3-001
ENST00000505691.2	alternative 3' UTR
ENST00000381922.5	MANE_select
ENST00000217260.9	FLJ16018
ENST00000217260.9	MANE_select
ENST00000664648.1	Assembled from SLRseq reads (SRP049776)
ENST00000660463.1	Assembled from SLRseq reads (SRP049776)
ENST00000659167.1	Assembled from SLRseq reads (SRP049776)
ENST00000656576.1	Assembled from SLRseq reads (SRP049776)
ENST00000652336.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000381899.8	alternative 5' UTR
ENST00000335877.11	MANE_select
ENST00000381894.3	FLJ11190
ENST00000481747.1	chromosome 20 open reading frame 46
ENST00000400633.2	MANE_select
ENST00000246108.3	alternative 5' UTR
ENST00000381867.6	MANE_select
ENST00000360779.4	MANE_select
ENST00000609470.6	Assembled from SLRseq reads (SRP049776)
ENST00000658491.1	Assembled from SLRseq reads (SRP049776)
ENST00000665859.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653665.1	Assembled from SLRseq reads (SRP049776)
ENST00000446423.2	Assembled from SLRseq reads (SRP049776)
ENST00000446423.2	novel transcript
ENST00000609285.6	Assembled from SLRseq reads (SRP049776)
ENST00000670879.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000412497.1	putative novel transcript
ENST00000400137.9	Human Swiss-Prot isoform P62942.2
ENST00000400137.9	MANE_select
ENST00000400137.9	alternative 3' UTR
ENST00000618612.5	NP_001186715.1
ENST00000618612.5	mRNA and EST evidence: BC119733.1, BU540706, BI253628, DA432898, HY086172 and BG248932
ENST00000439640.5	mRNA and EST evidence: AB241123 and HY157482
ENST00000678136.1	alternative 3' UTR
ENST00000677335.1	alternative 3' UTR
ENST00000381719.8	alternative 3' UTR
ENST00000678408.1	EST evidence: CN426079.1
ENST00000678408.1	alternative 3' UTR
ENST00000381724.8	EST evidence: BF348102.1, CD356436.1, HY061579, HY070176 and HY041222
ENST00000381724.8	alternative 3' UTR
ENST00000216879.9	FLJ36526
ENST00000216879.9	MANE_select
ENST00000481731.5	protein tyrosine phosphatase, non-receptor type 1-like
ENST00000486775.5	protein tyrosine phosphatase, non-receptor type 1-like
ENST00000359801.8	MANE_select
ENST00000359801.8	protein tyrosine phosphatase, non-receptor type 1-like
ENST00000381630.2	protein tyrosine phosphatase, non-receptor type 1-like
ENST00000381621.5	NAGNAG splice site
ENST00000381623.4	MANE_select
ENST00000381605.9	MANE_select
ENST00000279477.11	FLJ26614
ENST00000303415.7	MANE_select
ENST00000456177.5	FLJ36200
ENST00000340424.4	PTPNS (protein tyrosine phosphatase, non-receptor type substrate) family pseudogene
ENST00000671643.1	Assembled from RACEseq reads
ENST00000661517.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658107.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000447206.1	putative novel protein
ENST00000653463.1	Assembled from SLRseq reads (SRP049776)
ENST00000668670.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668670.1	Assembled from SLRseq reads (SRP049776)
ENST00000655119.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666681.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654380.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000358771.5	MANE_select
ENST00000446562.1	FLJ33362
ENST00000651021.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000217305.3	LR annotation
ENST00000217305.3	MANE_select
ENST00000651328.1	alternative 5' UTR
ENST00000650824.1	alternative 5' UTR
ENST00000651882.1	alternative 5' UTR
ENST00000650937.1	alternative 5' UTR
ENST00000651684.1	alternative 5' UTR
ENST00000650874.1	alternative 5' UTR
ENST00000652436.1	alternative 5' UTR
ENST00000651996.1	alternative 5' UTR
ENST00000427639.1	ribosomal protein L7 pseudogene 2
ENST00000381482.8	MANE_select
ENST00000381482.8	NP_543026.2
ENST00000652709.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000661904.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658070.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000447956.5	putative novel transcript
ENST00000411839.1	putative novel transcript
ENST00000651531.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000381458.6	MANE_select
ENST00000202625.7	MANE_select
ENST00000477505.1	not organism-supported
ENST00000381342.7	MANE_select
ENST00000465019.1	FLJ31172
ENST00000278772.9	FLJ39592
ENST00000278772.9	MANE_select
ENST00000445484.5	alternative 5' UTR
ENST00000445484.5	zinc finger protein 343 (novel KRAB box protein)
ENST00000421216.1	alternative 5' UTR
ENST00000358864.2	LR annotation
ENST00000358864.2	MANE_select
ENST00000496948.2	FLJ37470
ENST00000651302.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000329276.10	DKFZp686B1699
ENST00000329276.10	MANE_select
ENST00000474315.5	non canonical TEC
ENST00000380843.9	MANE_select
ENST00000466999.1	isocitrate dehydrogenase 3 (NAD+) beta (IDH3B)
ENST00000418739.1	putative novel transcript
ENST00000449079.7	novel protein
ENST00000469215.2	novel transcript
ENST00000481662.2	novel transcript
ENST00000477287.1	novel transcript
ENST00000411635.1	ribosomal protein L19 pseudogene 1
ENST00000380605.3	FLJ14755
ENST00000380605.3	MANE_select
ENST00000603872.2	MANE_select
ENST00000603872.2	alternative 5' UTR
ENST00000380585.2	MANE_select
ENST00000474714.5	novel transcript
ENST00000487501.2	novel transcript
ENST00000360652.7	FLJ31791
ENST00000360652.7	MANE_select
ENST00000356872.7	FLJ22376
ENST00000448755.5	alternative 5' UTR
ENST00000439542.1	alternative 5' UTR
ENST00000380469.7	FLJ31225
ENST00000380445.8	MANE_select
ENST00000481812.4	non canonical TEC
ENST00000380443.5	vacuolar protein sorting 16 (yeast)
ENST00000455631.5	alternative 5' UTR
ENST00000216877.10	alternative 5' UTR
ENST00000431048.5	alternative 5' UTR
ENST00000430705.5	alternative 5' UTR
ENST00000318266.9	alternative 5' UTR
ENST00000359100.6	MANE_select
ENST00000359100.6	alternative 5' UTR
ENST00000380325.4	MANE_select
ENST00000217386.2	MANE_select
ENST00000380293.3	MANE_select
ENST00000217173.7	KIAA0860
ENST00000217173.7	MANE_select
ENST00000348031.6	FLJ12382
ENST00000449731.1	alternative 5' UTR
ENST00000380266.4	FLJ13149
ENST00000380266.4	MANE_select
ENST00000329152.7	KIAA0552
ENST00000496781.1	novel transcript
ENST00000354488.8	MANE_select
ENST00000470203.1	novel transcript
ENST00000380113.8	MANE_select
ENST00000380059.7	NP_114423
ENST00000642402.1	LR annotation
ENST00000642402.1	MANE_select
ENST00000474451.5	FLJ33838
ENST00000644862.1	alternative 5' UTR
ENST00000621919.1	CAGE supported TSS
ENST00000252032.10	MANE_select
ENST00000252032.10	chromosome 20 open reading frame 194 (DKFZp434N061)
ENST00000619760.1	chromosome 20 open reading frame 194 novel transcript (FLJ13857)
ENST00000430836.1	ubiquitin-conjugating enzyme E2 variant 1 pseudogene 1
ENST00000421444.1	pseudogene similar to TCEAL1 (transcription elongation factor A (SII)-like 1
ENST00000262919.10	MANE_select
ENST00000446317.1	splicing factor 3a, subunit 3 pseudogene
ENST00000290417.7	MANE_select
ENST00000290417.7	isoform a
ENST00000319242.8	isoform b
ENST00000477160.1	isoform c
ENST00000466620.5	DKFZp434K0521
ENST00000483362.1	FLJ36751
ENST00000356518.7	MANE_select
ENST00000419548.4	FLJ00051, FLJ00073
ENST00000344754.6	EnsCodingFull|3P|XLOC_043347|TCONS_00172853:1.47917
ENST00000344754.6	MANE_select
ENST00000254963.7	FLJ32150
ENST00000254963.7	MANE_select
ENST00000379772.4	FLJ40236, FLJ12651, FLJ14158
ENST00000379772.4	MANE_select
ENST00000379756.3	MANE_select
ENST00000471499.5	DKFZp434I114
ENST00000379751.5	MANE_select
ENST00000467519.5	FLJ35394
ENST00000439880.6	CDC25B1
ENST00000245960.10	CDC25B3
ENST00000245960.10	MANE_select
ENST00000340833.4	CDC25B2
ENST00000379567.6	FLJ36013
ENST00000379567.6	alternative 5' UTR
ENST00000455742.5	alternative 5' UTR
ENST00000615891.2	FLJ11168
ENST00000615891.2	MANE_select
ENST00000428216.4	KIAA1271, FLJ13737
ENST00000428216.4	MANE_select
ENST00000451507.1	putative novel transcript
ENST00000497424.5	FLJ11729, DKFZp547J0513
ENST00000316562.9	FLJ40477
ENST00000610179.6	CAGE supported TSS
ENST00000358395.11	MANE_select
ENST00000358395.11	alternative 5' UTR
ENST00000440049.1	ribosomal protein L21 pseudogene 2
ENST00000379526.1	novel protein
ENST00000493223.1	novel transcript
ENST00000305958.9	MANE_select
ENST00000379460.6	FLJ20746
ENST00000379460.6	alternative 5' UTR
ENST00000457205.1	FLJ22285
ENST00000466004.1	novel transcript
ENST00000658198.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658198.1	novel transcript
ENST00000419003.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000379453.6	MANE_select
ENST00000661308.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661705.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448825.1	putative novel transcript
ENST00000419863.1	putative novel transcript
ENST00000429405.1	ribosomal protein L7a like 2 (pseudogene)
ENST00000652447.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000458402.1	ribosomal protein S4 pseudogene
ENST00000430350.2	alternative 5' UTR
ENST00000379440.9	MANE_select
ENST00000424424.2	alternative 5' UTR
ENST00000457586.2	alternative 5' UTR
ENST00000305817.3	MANE_select
ENST00000662883.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418528.5	alternative 5' UTR
ENST00000423718.2	alternative 5' UTR
ENST00000432048.1	isopentenyl-diphosphate delta isomerase 1 (IDI1) pseudogene
ENST00000379400.8	KIAA0168
ENST00000379400.8	MANE_select
ENST00000338244.6	MANE_select
ENST00000338244.6	alternative 5' UTR
ENST00000435457.1	RPS21 (ribosomal protein S21) pseudogene
ENST00000379277.6	alternative 5' UTR
ENST00000492419.1	novel transcript
ENST00000379299.6	alternative 5' UTR
ENST00000379286.6	FLJ31138
ENST00000379286.6	alternative 5' UTR
ENST00000379279.6	alternative 5' UTR
ENST00000379283.6	alternative 5' UTR
ENST00000202834.11	alternative 5' UTR
ENST00000342308.10	MANE_select
ENST00000379143.10	MANE_select
ENST00000379160.3	alternative 5' UTR
ENST00000460006.6	FLJ14789, FLJ10552
ENST00000460006.6	MANE_select
ENST00000468817.5	FLJ33726
ENST00000379070.3	FLJ38111
ENST00000678254.1	CAGE supported TSS
ENST00000678254.1	MANE_select
ENST00000217270.4	alternative 5' UTR
ENST00000217270.4	upstream ATG
ENST00000668553.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000660590.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661981.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668370.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665791.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668033.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665811.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659505.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666637.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651363.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000666888.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000599273.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665203.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669296.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665426.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661909.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663728.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653999.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663522.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663916.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664972.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670106.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664467.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656534.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000414677.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658725.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654514.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663995.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656899.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655376.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664317.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667166.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669067.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654489.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670531.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654250.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656400.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657133.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657133.1	novel transcript
ENST00000669038.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656275.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665611.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653836.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653876.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000422352.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000422352.6	novel transcript
ENST00000422352.6	this variant and variant fragment dJ828H9.3.2 could be part of one single variant
ENST00000654287.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420529.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420529.6	novel transcript
ENST00000653249.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658058.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664898.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669847.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656638.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671629.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654309.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000600157.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668401.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000609252.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666158.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669585.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657840.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660117.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666761.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651499.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000671354.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000430097.2	novel transcript (LOC284769)
ENST00000653367.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000456714.1	novel transcript (LOC284769)
ENST00000661996.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000650928.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000664106.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000589201.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665765.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654011.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660858.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663299.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000450640.1	novel transcript
ENST00000447840.1	ribosomal protein S18 pseudogene 1
ENST00000413249.1	novel transcript
ENST00000418646.5	novel protein
ENST00000481038.5	DKFZp45101715
ENST00000481038.5	novel transcript
ENST00000379019.7	KIAA1434, FLJ11085
ENST00000379019.7	MANE_select
ENST00000462080.1	novel transcript
ENST00000473797.1	novel transcript
ENST00000481690.2	novel transcript
ENST00000422311.1	EIF4E (eukaryotic translation initiation factor 4E) pseudogene
ENST00000303142.11	MANE_select
ENST00000445603.1	alternative 5' UTR
ENST00000378961.9	MANE_select
ENST00000488832.1	FLJ30309
ENST00000203001.7	MANE_select
ENST00000473131.5	novel transcript
ENST00000466974.5	KIAA1153
ENST00000466974.5	novel transcript
ENST00000493972.1	novel transcript
ENST00000610722.4	MANE_select
ENST00000265187.4	NP_877954.1
ENST00000652720.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000378863.9	MANE_select
ENST00000489345.5	novel transcript
ENST00000464921.5	novel transcript
ENST00000478846.1	novel transcript
ENST00000378858.5	MANE_select
ENST00000478194.1	FLJ20116
ENST00000478194.1	novel transcript
ENST00000217289.9	MANE_select
ENST00000378844.1	alternative 5' UTR
ENST00000442013.1	TAR DNA-binding protein pseudogene
ENST00000434910.1	NS1-associated protein 1 (NSAP1) pseudogene
ENST00000415932.1	novel transcript
ENST00000658541.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655019.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000445589.1	putative novel transcript
ENST00000378827.5	CCDS13099.1
ENST00000378827.5	MANE_select
ENST00000425900.1	putative novel transcript
ENST00000449581.1	novel transcript
ENST00000661779.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668144.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668728.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000428954.1	putative novel transcript
ENST00000663217.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000455299.1	novel transcript
ENST00000654533.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653032.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000400616.2	FUSIP1 pseudogene (pFUSIP1)
ENST00000378789.4	MANE_select
ENST00000246024.7	MANE_select
ENST00000671251.1	Assembled from SLRseq reads (SRP049776)
ENST00000655912.1	Assembled from SLRseq reads (SRP049776)
ENST00000637919.1	alternative 5' UTR
ENST00000630495.2	alternative 5' UTR
ENST00000378641.7	alternative 3' UTR
ENST00000338037.11	KIAA0581
ENST00000338037.11	MANE_select
ENST00000628900.1	NMD likely if extended
ENST00000626966.2	alternative 5' UTR
ENST00000487210.5	DKFZp434A0814
ENST00000494924.2	FLJ13627
ENST00000450951.1	phosphorylase kinase, beta pseudogene 1
ENST00000441231.1	putative novel transcript
ENST00000451443.1	putative novel transcript
ENST00000439121.1	ribosomal protein L31 (RPL31) pseudogene
ENST00000407043.6	alternative 5' UTR
ENST00000441846.5	alternative 5' UTR
ENST00000378473.9	MANE_select
ENST00000437503.5	alternative 5' UTR
ENST00000416836.5	alternative 5' UTR
ENST00000414679.6	NP_001166117
ENST00000443469.1	novel transcript
ENST00000246070.3	MANE_select
ENST00000353224.10	MANE_select
ENST00000353224.10	alternative 5' UTR
ENST00000378423.5	alternative 5' UTR
ENST00000378429.3	KIAA1264
ENST00000378429.3	alternative 5' UTR
ENST00000657954.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000428769.1	putative novel transcript
ENST00000656748.1	Assembled from SLRseq reads (SRP049776)
ENST00000437504.1	alternative 5' UTR
ENST00000378392.6	MANE_select
ENST00000378380.4	FLJ40370, FLJ21669, FLJ23883
ENST00000378380.4	alternative 5' UTR
ENST00000655841.1	Assembled from SLRseq reads (SRP049776)
ENST00000658520.1	Assembled from SLRseq reads (SRP049776)
ENST00000661614.1	Assembled from SLRseq reads (SRP049776)
ENST00000663466.1	Assembled from SLRseq reads (SRP049776)
ENST00000670580.1	Assembled from SLRseq reads (SRP049776)
ENST00000664172.1	Assembled from SLRseq reads (SRP049776)
ENST00000658443.1	Assembled from SLRseq reads (SRP049776)
ENST00000666905.1	Assembled from SLRseq reads (SRP049776)
ENST00000603542.6	Assembled from SLRseq reads (SRP049776)
ENST00000662559.1	Assembled from SLRseq reads (SRP049776)
ENST00000661134.1	Assembled from RACEseq reads
ENST00000655307.1	Assembled from SLRseq reads (SRP049776)
ENST00000660550.1	Assembled from SLRseq reads (SRP049776)
ENST00000667042.1	Assembled from SLRseq reads (SRP049776)
ENST00000671416.1	Assembled from SLRseq reads (SRP049776)
ENST00000438646.1	novel transcript
ENST00000656496.1	Assembled from SLRseq reads (SRP049776)
ENST00000421143.6	novel transcript
ENST00000426491.5	novel transcript
ENST00000605592.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000451151.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451151.6	novel transcript
ENST00000671453.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000453544.5	novel transcript
ENST00000662058.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000424931.1	putative novel transcript
ENST00000666915.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000458004.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000458004.2	putative novel transcript
ENST00000254976.7	MANE_select
ENST00000664194.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000416198.1	hypoxia induced gene 1 (HIG1) pseudogene
ENST00000446637.1	ribosomal protein L23a pseudogene 6
ENST00000441308.1	novel (FLJ10498) pseudogene
ENST00000347364.7	CAGE supported TSS
ENST00000347364.7	MANE_select
ENST00000399054.6	alternative 5' UTR
ENST00000609375.1	uorf experimentally verified (pmid 23671934)
ENST00000334534.10	MANE_select
ENST00000254958.10	CAGE supported TSS
ENST00000254958.10	LR annotation
ENST00000254958.10	MANE_select
ENST00000667822.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654385.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418690.1	novel transcript
ENST00000448859.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448859.2	novel transcript
ENST00000668688.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654048.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665099.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657181.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667238.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666969.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660168.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663948.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653164.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655050.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655890.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656902.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653414.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656524.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665608.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662420.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657238.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663360.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000406588.1	FAT tumour suppressor homolog 1 (Drosophila) pseudogene 1
ENST00000659767.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662726.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662726.1	novel protein
ENST00000378252.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000444792.1	Variant 2
ENST00000666460.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000412405.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000412405.2	Putative novel transcript.
ENST00000412405.2	Variant 1
ENST00000667330.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451072.1	ribosomal protein S11, pseudogene 1
ENST00000661821.1	Assembled from SLRseq reads (SRP049776)
ENST00000437662.1	phosphoglycerate mutase 3 pseudogene
ENST00000569833.1	confirm experimentally
ENST00000569833.1	no polyA features, but CpG island suggestive this is a lincRNA
ENST00000663254.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659465.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427835.3	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000656506.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000557899.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666572.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668731.1	Assembled from RACEseq reads
ENST00000254977.7	NP_852108
ENST00000399006.6	alternative 5' UTR
ENST00000405977.5	KIAA0952
ENST00000450368.1	alternative 5' UTR
ENST00000422390.5	alternative 5' UTR
ENST00000378226.7	MANE_select
ENST00000378226.7	genebuild_only_MANE
ENST00000439529.1	novel transcript
ENST00000654812.1	Assembled from SLRseq reads (SRP049776)
ENST00000455132.1	putative novel transcript
ENST00000442389.1	putative novel transcript
ENST00000414718.1	proliferation-associated 2G4 pseudogene 2
ENST00000456265.1	novel transcript
ENST00000651426.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000651029.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000660848.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666864.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660733.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655843.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000432244.1	novel transcript
ENST00000661302.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664230.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668019.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658737.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658457.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654168.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669657.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669978.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670547.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671262.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000399002.7	MANE_select
ENST00000476791.1	FLJ11112
ENST00000434210.5	alternative 5' UTR
ENST00000262487.5	MANE_select
ENST00000262487.5	chromosome 20 open reading frame 82 (similar to Xenopus laevis Isthmin (ISM))
ENST00000431407.1	Putative novel transcript
ENST00000420044.1	Putative novel transcript
ENST00000337743.9	FLJ20212, FLJ22018
ENST00000337743.9	MANE_select
ENST00000432206.1	glyceraldehyde-3-phosphate dehydrogenase pseudogene 2
ENST00000617257.2	CAGE supported TSS
ENST00000378081.9	FLJ33741
ENST00000378106.10	MANE_select
ENST00000485738.5	novel transcript
ENST00000477732.5	novel transcript
ENST00000481249.5	novel transcript
ENST00000475968.5	novel transcript
ENST00000476536.5	novel transcript
ENST00000469177.5	novel transcript
ENST00000464269.5	novel transcript
ENST00000479716.5	novel transcript
ENST00000487478.5	novel transcript
ENST00000476124.1	novel transcript
ENST00000476200.5	novel transcript
ENST00000479682.5	novel transcript
ENST00000486772.1	novel transcript
ENST00000284951.10	MANE_select
ENST00000284951.10	NP_001258468.1
ENST00000476952.1	chromosome 20 open reading frame 50 (dJ631M13.1, similar to SEL1L) (C20orf50)(DJ842G6.2, DKFZp434C1826)
ENST00000477435.1	chromosome 20 open reading frame 50 (dJ631M13.1, similar to SEL1L) (C20orf50)(DJ842G6.2, DKFZp434C1826)
ENST00000217246.8	FLJ16368
ENST00000477147.5	novel transcript
ENST00000483997.5	novel transcript
ENST00000492055.5	novel transcript
ENST00000462552.5	novel transcript
ENST00000494602.5	novel transcript
ENST00000490428.5	novel transcript
ENST00000463861.5	novel transcript
ENST00000464883.5	novel transcript
ENST00000497992.1	novel transcript
ENST00000402914.5	novel protein (LOC284776)
ENST00000486914.1	novel transcript
ENST00000407045.3	novel protein (LOC284776)
ENST00000456781.1	ribosomal protein S3 pseudogene 1
ENST00000418670.1	small inducible cytokine subfamily E, member 1 (endothelial-monocyte activating) pseudogene
ENST00000341420.5	FLJ90428
ENST00000341420.5	MANE_select
ENST00000341420.5	alternative 5' UTR
ENST00000378053.3	KIAA1469, FLJ90402, FLJ14391
ENST00000656415.1	Assembled from RACEseq reads
ENST00000427702.1	ring finger protein 11B pseudogene
ENST00000430953.1	ribosomal protein S10 pseudogene 2
ENST00000653740.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664409.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000455291.1	novel transcript
ENST00000441428.1	novel transcript
ENST00000453972.1	putative novel transcript
ENST00000392855.2	cyclic AMP phosphoprotein (ARPP-19) pseudogene
ENST00000656724.1	Assembled from SLRseq reads (SRP049776)
ENST00000669729.1	Assembled from SLRseq reads (SRP049776)
ENST00000655547.1	Assembled from SLRseq reads (SRP049776)
ENST00000438507.1	peptidylprolyl isomerase (cyclophilin) pseudogene 11
ENST00000354981.7	MANE_select
ENST00000457002.1	ribosomal protein, large, P0 pseudogene 1
ENST00000443141.2	ribosomal protein L7a-like 3 (pseudogene)
ENST00000425939.1	novel transcript
ENST00000377943.9	alternative 5' UTR
ENST00000246071.8	MANE_select
ENST00000246081.3	MANE_select
ENST00000422574.1	novel transcript
ENST00000662151.1	Assembled from SLRseq reads (SRP049776)
ENST00000663240.1	Assembled from SLRseq reads (SRP049776)
ENST00000377899.5	NP_001188457
ENST00000262545.7	MANE_select
ENST00000536609.1	NP_001188458
ENST00000459871.1	FLJ34186
ENST00000377873.8	MANE_select
ENST00000246069.12	MANE_select
ENST00000474024.5	DKFZp686O20275
ENST00000468428.1	FLJ41000
ENST00000470422.5	FLJ36146
ENST00000377813.6	KIAA1398, DKFZp586A1420
ENST00000377813.6	MANE_select
ENST00000398782.2	alternative 5' UTR
ENST00000545418.2	NP_001152967
ENST00000427254.1	alternative 5' UTR
ENST00000246090.6	MANE_select
ENST00000246090.6	alternative 5' UTR
ENST00000467330.1	novel transcript
ENST00000377759.9	MANE_select
ENST00000377759.9	alternative 5' UTR
ENST00000377759.9	upstream uORF
ENST00000606557.1	upstream uORF
ENST00000606602.1	upstream uORF
ENST00000278780.7	FLJ12222
ENST00000278780.7	MANE_select
ENST00000377710.10	FLJ14597
ENST00000377710.10	MANE_select
ENST00000463219.1	novel transcript
ENST00000467391.1	novel transcript
ENST00000677610.1	NAGNAG splice site
ENST00000464792.2	alternative 5' UTR
ENST00000435364.8	alternative 5' UTR
ENST00000678772.1	alternative 5' UTR
ENST00000489634.2	CAGE supported TSS
ENST00000432901.4	MANE_select
ENST00000667370.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000434018.5	alternative 5' UTR
ENST00000462170.1	FLJ16801
ENST00000666293.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000476058.5	novel transcript FLJ22653
ENST00000377630.9	FLJ30982
ENST00000377630.9	non canonical acceptor site between exons 11 and 12
ENST00000377630.9	non canonical polymorphism
ENST00000357236.8	non canonical polymorphism
ENST00000480488.2	CAGE supported TSS
ENST00000480488.2	non canonical polymorphism
ENST00000460891.5	non canonical acceptor splicing site between exons 12 and 13
ENST00000460891.5	non canonical polymorphism
ENST00000460891.5	novel transcript
ENST00000470526.1	QC splicing correct
ENST00000470526.1	non canonical polymorphism
ENST00000470526.1	novel transcript
ENST00000377603.5	MANE_select
ENST00000337227.9	MANE_select
ENST00000336714.8	alternative 5' UTR
ENST00000646240.1	alternative 5' UTR
ENST00000450074.6	alternative 5' UTR
ENST00000474619.1	alternative 5' UTR
ENST00000645851.1	alternative 5' UTR
ENST00000650089.1	CAGE supported TSS
ENST00000650089.1	LR annotation
ENST00000650089.1	MANE_select
ENST00000650089.1	alternative 5' UTR
ENST00000435844.3	NAGNAG splice site
ENST00000411646.2	MANE_select
ENST00000411646.2	NAGNAG splice site
ENST00000377452.4	LR annotation
ENST00000377452.4	MANE_select
ENST00000412553.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000412553.6	FLJ37287
ENST00000662199.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662199.1	Assembled from SLRseq reads (SRP049776)
ENST00000664962.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664962.1	Assembled from SLRseq reads (SRP049776)
ENST00000654746.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670001.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669396.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000455340.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000377428.4	MANE_select
ENST00000660042.1	Assembled from SLRseq reads (SRP049776)
ENST00000328041.11	MANE_select
ENST00000446849.1	putative novel transcript
ENST00000319682.2	FLJ40178
ENST00000609846.1	nested 454 RNA-Seq supported
ENST00000598007.2	CAGE supported TSS
ENST00000255006.12	MANE_select
ENST00000648440.1	FLJ37565
ENST00000488077.1	not organism-supported
ENST00000310450.8	NM_181528.2
ENST00000334982.9	MANE_select
ENST00000536226.2	MANE_select
ENST00000377327.8	AT-AC splicing between exons 6 and 7
ENST00000377327.8	DKFZp762M013, FLJ12846, FLJ13184, FLJ13666, FLJ22689
ENST00000521379.1	not organism-supported
ENST00000674296.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000245957.10	MANE_select
ENST00000245957.10	novel protein
ENST00000674269.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674269.1	novel transcript
ENST00000377306.5	novel protein (DKFZP434K156)
ENST00000377303.6	alternative 5' UTR
ENST00000442372.2	non canonical TEC
ENST00000442372.2	novel protein
ENST00000431753.1	chromosome 20 open reading frame 26
ENST00000431753.1	this variant and variant fragment dJ1178H5.4.2 could be part of one single variant
ENST00000476414.5	novel transcript
ENST00000468719.6	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000493330.5	novel transcript
ENST00000674463.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000497372.1	novel transcript
ENST00000377293.5	novel protein
ENST00000486624.1	novel transcript
ENST00000488640.1	novel transcript
ENST00000674445.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000443692.1	located in intron of gene dJ1178H5.4
ENST00000443692.1	partially supported by GENSCAN; could be a pseudogene
ENST00000443692.1	putative novel transcript
ENST00000445304.1	ribosomal Protein L17 pseudogene 1
ENST00000310227.3	MANE_select
ENST00000202677.12	MANE_select
ENST00000430436.5	novel protein (FLJ11349) similar to rat tulip proteins 1 and 2, (KIAA1272)
ENST00000430436.5	novel protein (FLJ11349) similar to rat tulip proteins 1 and 2, (KIAA1272), variant 1 (contains FLJ22541)
ENST00000427175.2	novel protein (FLJ12819) similar to rat tulip proteins 1 and 2
ENST00000495793.2	novel transcript
ENST00000424981.1	novel protein
ENST00000437558.1	mitochondrial ribosmal protein S11 pseudogene 1
ENST00000432942.1	putative novel transcript
ENST00000655093.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655093.1	putative novel transcript
ENST00000668281.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000455890.2	putative novel transcript
ENST00000671648.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668193.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670814.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000420705.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652795.1	Assembled from SLRseq reads (SRP049776)
ENST00000662369.1	Assembled from SLRseq reads (SRP049776)
ENST00000421023.1	ribosomal protein L24 pseudogene 2
ENST00000620891.4	NP_001156494.1
ENST00000616848.4	NP_001156495.1
ENST00000620553.2	NMD likely if extended
ENST00000619189.5	MANE_select
ENST00000441136.1	chromosome 20 open reading frame 19
ENST00000423272.1	novel transcript
ENST00000434043.2	putative novel transcript
ENST00000425746.2	putative novel transcript
ENST00000616177.4	novel transcript
ENST00000443753.5	novel transcript
ENST00000457423.1	ribosomal protein S15a pseudogene 1
ENST00000437614.1	novel zinc finger pseudogene
ENST00000377191.5	FLJ10711, FLJ20077, DKFZp434M182
ENST00000377191.5	MANE_select
ENST00000351817.5	CAGE supported TSS
ENST00000351817.5	MANE_select
ENST00000660673.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000421090.1	hydroxysteroid (17-beta) dehydrogenase 12 (HSD17B12) pseudogene
ENST00000447621.1	glutathione S-transferase M3 pseudogene
ENST00000377142.5	MANE_select
ENST00000671531.1	Assembled from SLRseq reads (SRP049776)
ENST00000431034.1	putative novel transcript
ENST00000654700.1	Assembled from SLRseq reads (SRP049776)
ENST00000653966.1	Assembled from SLRseq reads (SRP049776)
ENST00000665084.1	Assembled from SLRseq reads (SRP049776)
ENST00000663538.1	Assembled from SLRseq reads (SRP049776)
ENST00000624367.4	Assembled from SLRseq reads (SRP049776)
ENST00000668557.1	Assembled from SLRseq reads (SRP049776)
ENST00000666232.1	Assembled from SLRseq reads (SRP049776)
ENST00000668797.1	Assembled from SLRseq reads (SRP049776)
ENST00000661947.1	Assembled from SLRseq reads (SRP049776)
ENST00000668638.1	Assembled from SLRseq reads (SRP049776)
ENST00000659009.1	Assembled from SLRseq reads (SRP049776)
ENST00000655015.1	Assembled from SLRseq reads (SRP049776)
ENST00000655574.1	Assembled from SLRseq reads (SRP049776)
ENST00000653224.1	Assembled from SLRseq reads (SRP049776)
ENST00000669771.1	Assembled from SLRseq reads (SRP049776)
ENST00000398485.6	NP_006183.2
ENST00000412123.1	solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5-like pseudogene
ENST00000484902.1	ribosomal protein L41, pseudogene 1
ENST00000438222.1	putative novel transcript
ENST00000449427.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439450.1	putative novel transcript
ENST00000420928.1	putative novel transcript
ENST00000653586.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000377121.1	novel transcript (LOC284788)
ENST00000664479.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663012.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000564492.1	CAGE supported TSS
ENST00000638550.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000419308.7	MANE_select
ENST00000422494.1	novel transcript
ENST00000634603.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658267.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000441568.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000441568.2	novel transcript
ENST00000667287.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000437696.2	novel transcript
ENST00000653432.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652062.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000667901.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000635654.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000451602.1	keratin 18 pseudogene 3
ENST00000396692.2	cytochrome b-5 pseudogene 4
ENST00000415260.1	kinesin-like 7 (KNSL7) pseudogene
ENST00000440798.1	novel transcript
ENST00000440921.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000255008.5	MANE_select
ENST00000377103.3	MANE_select
ENST00000246006.5	MANE_select
ENST00000443744.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670261.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652955.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669811.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661992.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667753.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666879.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670920.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667919.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671677.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667058.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656146.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660372.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666551.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661171.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654323.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666940.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656699.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660909.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651897.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000660151.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658507.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659548.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665491.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656333.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670747.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653250.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671352.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663750.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000622708.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659149.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665327.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653694.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671541.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668880.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670224.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659901.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671163.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653675.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669864.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658111.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655027.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652960.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658127.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671613.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657770.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662891.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668592.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661460.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660732.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671511.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662902.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000442884.1	putative novel transcript
ENST00000254998.3	FLJ22707
ENST00000254998.3	MANE_select
ENST00000442440.1	putative novel transcript
ENST00000452395.1	putative novel transcript
ENST00000338121.10	FLJ21794, FLJ31597, FLJ31915
ENST00000338121.10	MANE_select
ENST00000424216.1	alternative 5' UTR
ENST00000377026.4	MANE_select
ENST00000377009.8	MANE_select
ENST00000653231.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449810.5	alternative 5' UTR
ENST00000246012.2	MANE_select
ENST00000400563.6	novel transcript
ENST00000413633.5	novel transcript
ENST00000376987.1	possible pseudogene
ENST00000376979.4	MANE_select
ENST00000376971.4	MANE_select
ENST00000398411.5	alternative 3' UTR
ENST00000376925.8	MANE_select
ENST00000398409.1	alternative 5' UTR
ENST00000652804.1	Assembled from SLRseq reads (SRP049776)
ENST00000657240.1	Assembled from SLRseq reads (SRP049776)
ENST00000650975.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000668241.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668241.1	Assembled from SLRseq reads (SRP049776)
ENST00000653302.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000217423.4	FLJ27028
ENST00000217423.4	MANE_select
ENST00000671162.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652087.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000304749.7	MANE_select
ENST00000398402.1	alternative 5' UTR
ENST00000666655.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659088.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000437012.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670060.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000304725.3	MANE_select
ENST00000304710.5	MANE_select
ENST00000286890.8	alternative 5' UTR
ENST00000278765.8	alternative 5' UTR
ENST00000335694.4	MANE_select
ENST00000657180.1	Assembled from SLRseq reads (SRP049776)
ENST00000669143.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000664459.1	Assembled from SLRseq reads (SRP049776)
ENST00000457274.1	novel transcript (FLJ33581)
ENST00000667083.1	Assembled from SLRseq reads (SRP049776)
ENST00000457224.1	putative novel transcript
ENST00000453921.2	putative novel transcript
ENST00000458397.1	GAPD (glyceraldehyde-3-phosphate dehydrogenase) pseudogene
ENST00000376862.4	FLJ14220
ENST00000376862.4	MANE_select
ENST00000482637.1	novel transcript
ENST00000458461.1	putative novel transcript
ENST00000432834.1	putative novel transcript
ENST00000480798.2	MANE_select
ENST00000217456.3	MANE_select
ENST00000671041.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000484396.1	FLJ43935, FLJ33532, DKFZp666B209
ENST00000323482.9	FLJ14911, KIAA1846
ENST00000323482.9	MANE_select
ENST00000376726.3	FLJ37095
ENST00000376709.9	MANE_select
ENST00000376709.9	variant L1
ENST00000667504.1	Assembled from SLRseq reads (SRP049776)
ENST00000454676.5	novel transcript (LOC284798) (FLJ38481)
ENST00000665344.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653980.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669202.1	Assembled from SLRseq reads (SRP049776)
ENST00000671225.1	Assembled from SLRseq reads (SRP049776)
ENST00000667768.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438287.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000438287.6	novel transcript (LOC284798)
ENST00000426854.5	novel transcript (LOC284798)
ENST00000440357.1	novel transcript (LOC284798)
ENST00000440642.1	novel pseudogene
ENST00000665377.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000354989.9	DKFZp761J1915
ENST00000376652.9	FLJ90210
ENST00000376652.9	MANE_select
ENST00000435520.5	alternative 5' UTR
ENST00000485936.5	FLJ36711
ENST00000490187.1	FLJ38389
ENST00000216962.9	MANE_select
ENST00000465694.2	alternative 3' UTR
ENST00000339157.10	MANE_select
ENST00000481556.1	novel transcript
ENST00000491682.5	novel transcript
ENST00000471287.5	novel transcript
ENST00000461204.1	novel transcript
ENST00000414143.1	peptidylprolyl isomerase A (cyclophilin A) pseudogene 2
ENST00000262460.5	MANE_select
ENST00000262460.5	novel protein (KIAA0186)
ENST00000484893.1	novel transcript
ENST00000473460.1	novel transcript
ENST00000481735.1	novel transcript
ENST00000278886.11	MANE_select
ENST00000464285.5	novel transcript FLJ11792
ENST00000496509.2	novel transcript
ENST00000336104.5	KIAA0980 protein
ENST00000489780.5	novel transcript
ENST00000461642.2	novel transcript
ENST00000304788.4	FLJ30910, DKFZp31301829
ENST00000304788.4	MANE_select
ENST00000414393.5	novel transcript
ENST00000455791.5	novel transcript
ENST00000439498.5	novel transcript
ENST00000428254.6	Assembled from SLRseq reads (SRP049776)
ENST00000428254.6	novel transcript
ENST00000420803.5	novel transcript
ENST00000421829.1	novel transcript
ENST00000661376.1	Assembled from SLRseq reads (SRP049776)
ENST00000456611.1	endothelial-derived gene 1 (EG1) pseudogene
ENST00000252979.6	FLJ31622
ENST00000252979.6	MANE_select
ENST00000252979.6	alternative 5' UTR
ENST00000376436.5	FLJ43466
ENST00000660589.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665159.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000376445.3	putative novel transcript
ENST00000431580.1	vomeronasal organ phermone receptor family pseudogene
ENST00000665932.1	Assembled from SLRseq reads (SRP049776)
ENST00000659462.1	Assembled from SLRseq reads (SRP049776)
ENST00000663181.1	Assembled from SLRseq reads (SRP049776)
ENST00000666588.1	Assembled from SLRseq reads (SRP049776)
ENST00000453481.4	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000453481.4	novel transcript
ENST00000670090.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658073.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657325.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662978.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000485279.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000485279.2	putative novel transcript
ENST00000663313.1	Assembled from SLRseq reads (SRP049776)
ENST00000584071.1	alternative 5' UTR
ENST00000657987.1	Assembled from SLRseq reads (SRP049776)
ENST00000661999.1	Assembled from SLRseq reads (SRP049776)
ENST00000670112.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662668.1	Assembled from SLRseq reads (SRP049776)
ENST00000510553.1	novel zinc-finger pseudogene
ENST00000449316.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669090.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667959.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667322.1	Assembled from SLRseq reads (SRP049776)
ENST00000653942.1	Assembled from SLRseq reads (SRP049776)
ENST00000660813.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000389261.4	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666563.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656743.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652966.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652966.1	alternative 5' UTR
ENST00000482133.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670756.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657899.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663268.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653748.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000471057.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439881.1	alternative 5' UTR
ENST00000671124.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670372.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448580.1	putative novel transcript
ENST00000668826.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000376401.4	zinc-finger pseudogene
ENST00000478176.1	novel transcript
ENST00000416563.1	putative novel transcript
ENST00000657722.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669508.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661333.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661062.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670137.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669985.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671565.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655397.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665350.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669686.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653221.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665292.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656683.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653834.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662275.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000601901.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000600263.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000596111.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654362.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657701.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659239.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653215.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669316.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660574.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660574.1	novel transcript
ENST00000432499.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654167.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655434.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000597361.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668694.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000666928.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668420.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661119.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666839.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653815.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669111.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655913.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000427348.5	novel transcript
ENST00000666063.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671161.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667711.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671329.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000608487.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658650.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000594150.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658672.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670758.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655444.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000597979.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656383.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662454.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666792.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000601079.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656208.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655978.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667024.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000601119.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660445.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652953.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670101.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653551.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665866.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000608521.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671012.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652833.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652944.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000598451.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656254.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658266.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670080.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655393.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657160.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655339.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656916.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657347.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660119.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668178.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668868.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660879.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671440.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657341.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669713.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000600225.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000610014.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658192.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659943.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653547.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669026.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662664.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656445.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000609202.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656492.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666782.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653171.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654584.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660543.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658588.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656577.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659584.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661214.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000594135.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668457.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654556.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660025.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666644.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671410.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665132.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667417.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660810.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656649.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655883.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660993.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000596767.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667342.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000594130.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664616.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657813.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671277.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668909.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653142.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666925.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668640.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658022.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665602.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657765.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664408.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670286.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660622.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657303.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665857.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000380888.5	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000380888.5	FLJ45832
ENST00000654517.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655352.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655971.1	Assembled from SLRseq reads (SRP049776)
ENST00000658774.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655308.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000659084.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662035.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670409.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000445151.1	non canonical polymorphism
ENST00000654097.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656990.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669378.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664146.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657151.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418346.1	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 (MLLT10) pseudogene
ENST00000400552.1	MANE_select
ENST00000400550.2	DKKL1-pending (soggy-1) (SGY-1) pseudogene
ENST00000445194.2	CDK5 regulatory subunit associated protein 3 (CDK5RAP3) pseudogene
ENST00000400549.1	MANE_select
ENST00000458430.1	ribosomal protein L31 pseudogene 3
ENST00000433254.1	FLJ20060l (KIAA1574) pseudogene
ENST00000253381.3	MANE_select
ENST00000376321.4	MANE_select
ENST00000376314.3	MANE_select
ENST00000376309.4	MANE_select
ENST00000376309.4	defensin, beta 123 (DEFB-23)
ENST00000201979.3	MANE_select
ENST00000340852.9	FLJ90802
ENST00000398174.9	CAGE supported TSS
ENST00000398174.9	MANE_select
ENST00000498035.5	FLJ90205
ENST00000468559.5	)
ENST00000376112.4	MANE_select
ENST00000376075.4	MANE_select
ENST00000307677.5	MANE_select
ENST00000307677.5	alternative 5' UTR
ENST00000677194.1	alternative 5' UTR
ENST00000434194.2	alternative 5' UTR
ENST00000676582.1	alternative 5' UTR
ENST00000676942.1	alternative 5' UTR
ENST00000678563.1	alternative 5' UTR
ENST00000456404.6	alternative 5' UTR
ENST00000420488.6	alternative 5' UTR
ENST00000439267.2	alternative 5' UTR
ENST00000422920.2	alternative 5' UTR
ENST00000300403.11	MANE_select
ENST00000428124.1	ATP synthase, H+ transporting, mitochondrial F0 complex subunit f isoform 2 (ATP5J2) pseudogene
ENST00000375994.6	alternative 5' UTR
ENST00000375985.5	MANE_select
ENST00000375978.5	MANE_select
ENST00000278979.7	FLJ40111
ENST00000486996.5	FLJ34641
ENST00000428829.1	not organism-supported
ENST00000375938.8	NMD exception
ENST00000202017.6	MANE_select
ENST00000562532.3	MANE_select
ENST00000653258.1	Assembled from SLRseq reads (SRP049776)
ENST00000662576.1	Assembled from SLRseq reads (SRP049776)
ENST00000669470.1	Assembled from SLRseq reads (SRP049776)
ENST00000654743.1	Assembled from SLRseq reads (SRP049776)
ENST00000449519.1	novel transcript
ENST00000452892.3	MANE_select
ENST00000375862.7	NAGNAG at the start of exon 4
ENST00000375862.7	NAGNAG splice site
ENST00000375862.7	NP_001165601
ENST00000262651.4	downstream ATG
ENST00000375852.5	MANE_select
ENST00000375852.5	NAGNAG splice site
ENST00000375852.5	NP_002101
ENST00000520553.5	NAGNAG splice site
ENST00000520553.5	NP_001165600
ENST00000518730.5	NAGNAG splice site
ENST00000518730.5	NP_001165602
ENST00000470092.1	hemopoietic cell kinase
ENST00000398022.7	MANE_select
ENST00000398022.7	NP_055557
ENST00000217315.9	KIAA0255
ENST00000495749.1	FLJ42420
ENST00000565928.1	confirm experimentally
ENST00000476365.2	TSPY-like 3 (pseudogene)
ENST00000246229.5	FLJ23298
ENST00000246229.5	KIAA0198
ENST00000246229.5	MANE_select
ENST00000375749.8	KIAA0180
ENST00000375749.8	MANE_select
ENST00000655202.1	Assembled from SLRseq reads (SRP049776)
ENST00000375712.4	FLJ25565
ENST00000375712.4	KIAA0359
ENST00000375712.4	MANE_select
ENST00000375687.10	KIAA0978
ENST00000375687.10	MANE_select
ENST00000646367.1	NM_001164603.1
ENST00000646367.1	NP_001158075.1
ENST00000649901.1	alternative 5' UTR
ENST00000643168.1	alternative 5' UTR
ENST00000642676.1	alternative 5' UTR
ENST00000475781.1	novel transcript
ENST00000470428.1	novel transcript
ENST00000470428.1	this variant fragment and either of variant fragments .4.1 and .2.1 through to .2.4 could be part of one single variant
ENST00000485364.1	novel transcript
ENST00000442179.1	this gene is contained within gene .2 on the oposite strand and could be artifactual
ENST00000442179.1	translation of cDNA DFKZp564J1762 (Em:AL080086))
ENST00000664871.1	Assembled from SLRseq reads (SRP049776)
ENST00000413983.1	novel transcript
ENST00000375670.1	novel protein
ENST00000457213.1	putative novel transcript
ENST00000608990.6	FLJ33706
ENST00000608990.6	MANE_select
ENST00000608990.6	NMD exception
ENST00000278980.11	MANE_select
ENST00000328111.6	MANE_select
ENST00000443239.7	NP_001193984
ENST00000456297.6	NP_001193985
ENST00000375571.6	MANE_select
ENST00000569087.2	CAGE supported TSS
ENST00000356173.8	MANE_select
ENST00000170150.4	MANE_select
ENST00000349552.1	MANE_select
ENST00000445368.1	family with sequence similarity 16, member A, X-linked (FAM16AX) (GS1) pseudogene
ENST00000445356.1	novel transcript
ENST00000375483.3	5' extension based on mouse ortholog A2BGH0.1
ENST00000375483.3	NP_872325
ENST00000494121.1	novel transcript
ENST00000253362.6	alternative 5' UTR
ENST00000354932.6	MANE_select
ENST00000417727.1	suppressor of cytokine signalling 2 pseudogene 1
ENST00000419613.1	putative novel transcript
ENST00000490499.5	novel transcript
ENST00000375454.8	MANE_select
ENST00000375422.6	alternative 3' UTR
ENST00000354297.9	MANE_select
ENST00000354297.9	alternative 3' UTR
ENST00000440080.1	ribosomal protein L12 pseudogene 3
ENST00000253354.2	MANE_select
ENST00000464032.1	novel transcript
ENST00000346416.7	MANE_select
ENST00000498525.5	non canonical TEC
ENST00000498525.5	non-canonical splice acceptor site between exons 3 and 4
ENST00000217381.3	MANE_select
ENST00000342704.11	MANE_select
ENST00000246190.11	MANE_select
ENST00000480994.5	CAGE supported TSS
ENST00000480994.5	amyloid beta (A4) precursor protein-binding family A, member 2 protein
ENST00000375222.4	MANE_select
ENST00000677665.1	MANE_select
ENST00000343380.6	MANE_select
ENST00000409299.8	MANE_select
ENST00000375200.6	MANE_select
ENST00000375200.6	genebuild_only_MANE
ENST00000413849.1	ribosomal protein L31 pseudogene 2
ENST00000443171.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000217402.3	MANE_select
ENST00000397772.2	tropomyosin 5 pseudogene
ENST00000425307.1	Down syndrome critical region gene 5 (DSCR5) pseudogene
ENST00000663279.1	Assembled from SLRseq reads (SRP049776)
ENST00000432859.1	putative novel transcript
ENST00000669769.1	Assembled from SLRseq reads (SRP049776)
ENST00000668968.1	Assembled from SLRseq reads (SRP049776)
ENST00000440595.5	putative novel transcript
ENST00000246194.8	MANE_select
ENST00000493399.1	not organism-supported
ENST00000451556.2	novel transcript
ENST00000374980.3	MANE_select
ENST00000434010.1	ribosomal protein S2, pseudogene 1
ENST00000671505.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000443317.1	exportin, tRNA (nuclear export receptor for tRNAs) pseudogene 1
ENST00000433096.1	density-regulated protein (DENR) (DRP1, SMAP-3) pseudogene
ENST00000217426.7	MANE_select
ENST00000538132.1	NP_001155238
ENST00000437424.1	pseudogene similar to part of laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1)
ENST00000486883.5	alternative 5' UTR
ENST00000374864.10	LR annotation
ENST00000374864.10	MANE_select
ENST00000654846.1	alternative 5' UTR
ENST00000665428.1	alternative 5' UTR
ENST00000665346.1	alternative 5' UTR
ENST00000456658.1	cell division cycle 42 pseudogene 1
ENST00000454205.1	putative novel transcript
ENST00000449115.1	ferredoxin 1 (FDX1) pseudogene
ENST00000357156.7	MANE_select
ENST00000360668.8	MANE_select
ENST00000397709.1	alternative 3' UTR
ENST00000476428.1	not organism-supported
ENST00000217446.8	MANE_select
ENST00000450770.1	cytochrome c oxidase III (MTCO3) pseudogene
ENST00000359003.7	MANE_select
ENST00000359003.7	alternative 5' UTR
ENST00000374810.8	MANE_select
ENST00000655046.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000393368.2	high mobility group (nonhistone chromosomal) protein 4-like (pseudogene)
ENST00000336431.10	MANE_select
ENST00000484354.1	non canonical TEC
ENST00000360596.7	MANE_select
ENST00000464399.2	non canonical TEC
ENST00000651619.1	MANE_select
ENST00000644793.1	alternative 5' UTR
ENST00000643188.1	alternative 5' UTR
ENST00000643271.1	alternative 5' UTR
ENST00000645102.1	alternative 5' UTR
ENST00000644608.1	alternative 5' UTR
ENST00000470929.5	FLJ10085
ENST00000252015.3	MANE_select
ENST00000374492.8	FLJ10783, FLJ13869
ENST00000374492.8	MANE_select
ENST00000216968.5	MANE_select
ENST00000456790.2	MANE_select
ENST00000246186.8	MANE_select
ENST00000675032.1	alternative 5' UTR
ENST00000374436.7	alternative 5' UTR
ENST00000374450.8	MANE_select
ENST00000462894.1	NMD likely if extended
ENST00000456600.1	alternative 5' UTR
ENST00000374408.4	FLJ33819
ENST00000374408.4	MANE_select
ENST00000472559.5	novel transcript DKFZp686O0680
ENST00000374394.7	novel transcript FLJ12680
ENST00000374384.6	NP_955781.2
ENST00000374385.10	FLJ10850
ENST00000374385.10	MANE_select
ENST00000453855.5	novel transcript
ENST00000497717.5	novel transcript
ENST00000443429.5	novel transcript
ENST00000498651.1	novel transcript
ENST00000491125.5	novel transcript
ENST00000495752.1	novel transcript
ENST00000374369.8	MANE_select
ENST00000446710.5	5RACE054_RP3-477O4.2-001_CEP2:_lung
ENST00000446710.5	alternative 5' UTR
ENST00000446710.5	encode_confirmed
ENST00000446710.5	exons_1-5
ENST00000446710.5	tissue_lung
ENST00000420564.5	alternative 5' UTR
ENST00000397527.6	MANE_select
ENST00000397524.5	CDS added 12/4/07 by jm12
ENST00000425934.5	GENCODE experimental pipeline
ENST00000422671.1	GENCODE experimental pipeline
ENST00000374345.8	alternative 3' UTR
ENST00000246199.5	FLJ25360
ENST00000444723.3	CAGE supported TSS
ENST00000444723.3	MANE_select
ENST00000357394.8	FLJ90069, DKFZp547A2190
ENST00000348547.7	MANE_select
ENST00000279052.10	FLJ39165
ENST00000621044.4	FLJ13459
ENST00000611673.4	DKFZp666J207
ENST00000613061.4	DKFZp686F01207
ENST00000651414.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000412452.1	novel transcript
ENST00000325076.9	novel transcript FLJ22613
ENST00000434843.7	novel transcript
ENST00000374273.8	MANE_select
ENST00000317677.9	alternative 5' UTR
ENST00000397443.7	MANE_select
ENST00000397443.7	alternative 5' UTR
ENST00000397443.7	m130127_033614_00126_c100456792550000001523064703201341_s1_p0/65318/ccs.path1
ENST00000437340.5	NAGNAG splice site
ENST00000437340.5	alternative 5' UTR
ENST00000437340.5	non canonical polymorphism
ENST00000412056.5	alternative 5' UTR
ENST00000414664.5	alternative 5' UTR
ENST00000416778.5	alternative 5' UTR
ENST00000439806.6	alternative 5' UTR
ENST00000420363.5	alternative 5' UTR
ENST00000434795.5	alternative 5' UTR
ENST00000440240.5	alternative 5' UTR
ENST00000458038.5	alternative 5' UTR
ENST00000437100.5	alternative 5' UTR
ENST00000414711.5	alternative 5' UTR
ENST00000435747.2	alternative 5' UTR
ENST00000374114.8	MANE_select
ENST00000359646.1	alternative 5' UTR
ENST00000374104.7	alternative 5' UTR
ENST00000424458.5	alternative 5' UTR
ENST00000374092.9	MANE_select
ENST00000374085.5	FLJ31680
ENST00000397425.5	alternative 5' UTR
ENST00000541387.5	NP_001185918
ENST00000421540.1	NMD likely if extended
ENST00000374078.5	alternative 5' UTR
ENST00000374077.8	MANE_select
ENST00000336695.4	alternative 5' UTR
ENST00000253363.11	MANE_select
ENST00000442447.5	NMD likely if extended
ENST00000374012.8	MANE_select
ENST00000339089.10	alternative 5' UTR
ENST00000374000.8	alternative 5' UTR
ENST00000305978.7	MANE_select
ENST00000305978.7	alternative 5' UTR
ENST00000661851.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654816.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658817.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432589.5	alternative 5' UTR
ENST00000406771.6	alternative 5' UTR
ENST00000430276.5	alternative 5' UTR
ENST00000452261.5	alternative 5' UTR
ENST00000447825.5	alternative 5' UTR
ENST00000427533.2	alternative 5' UTR
ENST00000338074.7	MANE_select
ENST00000373945.5	alternative 5' UTR
ENST00000658515.1	Assembled from SLRseq reads (SRP049776)
ENST00000652809.1	Assembled from SLRseq reads (SRP049776)
ENST00000441208.1	novel transcript (FLJ33601)
ENST00000320849.9	MANE_select
ENST00000320849.9	alternative 5' UTR
ENST00000373913.7	KIAA0964
ENST00000478910.5	FLJ30590
ENST00000497862.1	non canonical conserved
ENST00000497862.1	not organism-supported
ENST00000656949.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000279022.7	MANE_select
ENST00000373874.6	alternative 5' UTR
ENST00000373872.9	MANE_select
ENST00000373872.9	alternative 5' UTR
ENST00000650844.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000558028.5	alternative 5' UTR
ENST00000560025.1	alternative 5' UTR
ENST00000558530.1	NP_001186464
ENST00000344795.8	MANE_select
ENST00000262866.9	MANE_select
ENST00000451198.2	heterogeneous nuclear ribonucleoprotein A3 pseudogene
ENST00000349004.6	MANE_select
ENST00000373750.9	MANE_select
ENST00000473615.5	non canonical U12
ENST00000473615.5	non-canonical splicing between exons 3 and 4 looks artefactual ratrher than a genuine splicing event
ENST00000447406.1	alternative 5' UTR
ENST00000237536.9	MANE_select
ENST00000465671.1	alternative 3' UTR
ENST00000602922.5	alternative 3' UTR
ENST00000217320.8	MANE_select
ENST00000646673.2	MANE_select
ENST00000645033.1	alternative 3' UTR
ENST00000644250.1	alternative 3' UTR
ENST00000642246.1	alternative 3' UTR
ENST00000647163.1	alternative 3' UTR
ENST00000646066.1	confirm experimentally
ENST00000645444.1	alternative 3' UTR
ENST00000646121.1	alternative 3' UTR
ENST00000373664.8	MANE_select
ENST00000411933.1	ribosomal protein S3A pseudogene 3
ENST00000453803.2	ribosomal protein S27a pseudogene 3
ENST00000417458.5	novel protein (DKFZp434N0426)
ENST00000343811.9	deletion/polymorphism at bp 19647-19644 truncates the CDS at the 5' end.  mRNA evidence Em:BC030006.1 contains an additional 29 nucleotides that enable the N terminal end of the annotated CDS to be extended by 40 amino acids
ENST00000343811.9	novel protein
ENST00000343811.9	sequence error
ENST00000466091.1	novel transcript
ENST00000400440.6	genomic sequence contains a polymorphism/deletion at bp 19644-19467. Supporting evidence EM:BC057767.1 contains 29 additional nucleotides  AGTGCCGGCCGCGGGGCCCTGTCTATAAG which are missing from the alignment with genomic sequence at this point and allow the ORF to be extended 5' to an upstream methionine
ENST00000400440.6	sequence error
ENST00000421643.1	deletion/polymorphism at bp 19647-19644 truncates the CDS at the 5' end.  mRNA evidence Em:AK093432.1 contains an additional 29 nucleotides that enable the N terminal end of the annotated CDS to be extended by 40 amino acids
ENST00000421643.1	novel protein (FLJ36113)
ENST00000421643.1	sequence error
ENST00000434295.5	novel protein
ENST00000434295.5	sequence error
ENST00000422138.1	alternative 5' UTR
ENST00000422138.1	alternatively spliced in 5' UTR, shares CDS with dJ343K2.3.2
ENST00000422138.1	novel protein
ENST00000447075.1	ribososmal protein L13 (RPL13) pseudogene
ENST00000237530.11	MANE_select
ENST00000373614.7	MANE_select
ENST00000373606.7	alternative 5' UTR
ENST00000397152.7	alternative 5' UTR
ENST00000397151.1	alternative 5' UTR
ENST00000652591.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000497734.5	May be alternative 5' UTR to main variant
ENST00000373578.7	MANE_select
ENST00000373567.6	Same CDS but alternative 5' UTR to main variant
ENST00000373558.2	not organism-supported
ENST00000397137.5	alternative 5' UTR
ENST00000373537.7	CAGE supported TSS
ENST00000373537.7	LR annotation
ENST00000373537.7	MANE_select
ENST00000397135.1	alternative 5' UTR
ENST00000397134.1	alternative 5' UTR
ENST00000397131.1	alternative 5' UTR
ENST00000432507.1	alternative 5' UTR
ENST00000445723.5	alternative 5' UTR
ENST00000414080.1	alternative 5' UTR
ENST00000456058.1	alternative 5' UTR
ENST00000649451.1	CAGE supported TSS
ENST00000649451.1	LR annotation
ENST00000649451.1	MANE_select
ENST00000653260.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655861.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000373508.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000361383.11	MANE_select
ENST00000361383.11	non canonical U12
ENST00000447935.3	non canonical U12
ENST00000628103.2	non canonical U12
ENST00000373461.9	MANE_select
ENST00000373447.8	MANE_select
ENST00000373447.8	alternative 5' UTR
ENST00000373433.9	MANE_select
ENST00000361475.7	MANE_select
ENST00000373403.7	alternative 5' UTR
ENST00000453095.1	alternative 5' UTR
ENST00000279024.9	KIAA1755
ENST00000279024.9	MANE_select
ENST00000418004.5	CAGE supported TSS
ENST00000451435.1	CAGE supported TSS
ENST00000451435.1	FLJ31292
ENST00000479646.1	CAGE supported TSS
ENST00000642449.2	CAGE supported TSS
ENST00000642449.2	MANE_select
ENST00000642449.2	upstream ATG
ENST00000417318.3	CAGE supported TSS
ENST00000489102.2	CAGE supported TSS
ENST00000490381.1	bactericidal/permeability-increasing protein
ENST00000217407.3	MANE_select
ENST00000422519.2	Assembled from SLRseq reads (SRP049776)
ENST00000422519.2	FLJ33613
ENST00000654008.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658076.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658076.1	Assembled from SLRseq reads (SRP049776)
ENST00000662982.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662982.1	Assembled from SLRseq reads (SRP049776)
ENST00000667188.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667835.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654183.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651115.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651115.2	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000667282.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655311.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657665.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666806.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669405.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671309.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659186.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666225.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653343.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669114.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663187.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668042.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658051.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664626.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655520.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665233.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660885.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666268.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000456953.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665735.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663540.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662213.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658141.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663534.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657868.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659102.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665440.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654853.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653697.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656320.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660558.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665693.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659255.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662568.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655692.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671249.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658488.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666549.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664964.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658324.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663955.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668482.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667412.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654092.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653277.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657429.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654389.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653753.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659400.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665003.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663784.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653938.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417578.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000436764.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669033.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664073.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666331.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669480.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658905.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661252.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669137.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665181.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670051.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667912.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659753.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656023.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662572.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655198.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660064.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660189.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657843.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664636.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668054.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670958.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658455.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423536.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657216.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666419.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659148.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000453698.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000453698.6	novel transcript (LOC128439)
ENST00000483342.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000483342.6	novel transcript (LOC128439)
ENST00000656815.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656815.1	novel transcript (LOC128439)
ENST00000657911.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657911.1	novel transcript (LOC128439)
ENST00000400436.6	novel transcript (FLJ30872) (LOC128439)
ENST00000661733.1	Assembled from SLRseq reads (SRP049776)
ENST00000661078.1	Assembled from SLRseq reads (SRP049776)
ENST00000440918.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000440918.6	novel transcript (LOC128439)
ENST00000669083.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656427.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000432153.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000432153.6	novel transcript (LOC128439)
ENST00000670898.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670898.1	novel transcript (LOC128439)
ENST00000666350.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667760.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666020.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656824.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000421599.5	novel transcript (LOC128439)
ENST00000670145.1	Assembled from SLRseq reads (SRP049776)
ENST00000434729.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661378.1	Assembled from SLRseq reads (SRP049776)
ENST00000669338.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663763.1	Assembled from SLRseq reads (SRP049776)
ENST00000669976.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669976.1	Assembled from SLRseq reads (SRP049776)
ENST00000359074.9	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000449351.5	novel transcript (LOC128439)
ENST00000660281.1	Assembled from SLRseq reads (SRP049776)
ENST00000660281.1	novel transcript (LOC128439)
ENST00000420006.5	novel transcript (LOC128439)
ENST00000659610.1	Assembled from SLRseq reads (SRP049776)
ENST00000437028.5	novel transcript (LOC128439)
ENST00000660884.1	Assembled from SLRseq reads (SRP049776)
ENST00000418383.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000418383.2	novel transcript (LOC128439)
ENST00000658222.1	Assembled from SLRseq reads (SRP049776)
ENST00000669207.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000457218.5	novel transcript (LOC128439)
ENST00000666813.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000442419.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656502.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000444816.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000262879.11	MANE_select
ENST00000397040.5	alternative 5' UTR
ENST00000243967.8	contains a RhoGAP domain
ENST00000217420.2	MANE_select
ENST00000243903.6	MANE_select
ENST00000299824.6	MANE_select
ENST00000373331.2	NP_001166206
ENST00000619304.4	FLJ31231
ENST00000619850.2	CAGE supported TSS
ENST00000619850.2	MANE_select
ENST00000373323.8	NP_001177738
ENST00000252011.8	FLJ22759
ENST00000252011.8	MANE_select
ENST00000652169.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000493450.1	FLJ32148
ENST00000654983.1	Assembled from SLRseq reads (SRP049776)
ENST00000419507.1	autophagy Apg3p/Aut1p-like (APG3) pseudogene
ENST00000652510.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000668185.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000444436.1	putative protein
ENST00000665074.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000421494.1	heat shock 10 kDa protein 1 (chaperonin 10) pseudogene
ENST00000669808.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669808.1	putative novel transcript
ENST00000445606.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664271.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667567.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670996.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665038.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668047.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656861.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432633.1	putative novel transcript
ENST00000669216.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423153.1	novel transcript
ENST00000445278.1	Putative novel transcript
ENST00000373313.3	MANE_select
ENST00000655799.1	Assembled from SLRseq reads (SRP049776)
ENST00000361337.3	MANE_select
ENST00000680945.1	CAGE supported TSS
ENST00000669288.1	Assembled from SLRseq reads (SRP049776)
ENST00000661983.1	Assembled from SLRseq reads (SRP049776)
ENST00000662554.1	Assembled from SLRseq reads (SRP049776)
ENST00000667669.1	Assembled from SLRseq reads (SRP049776)
ENST00000660264.1	Assembled from SLRseq reads (SRP049776)
ENST00000608689.5	NMD likely if extended
ENST00000609821.5	NMD likely if extended
ENST00000607954.1	nested 454 RNA-Seq supported
ENST00000309060.7	alternative 5' UTR
ENST00000559234.5	alternative 5' UTR
ENST00000558993.1	alternative 5' UTR
ENST00000560361.5	alternative 3' UTR
ENST00000432768.6	alternative 5' UTR
ENST00000441102.6	alternative 5' UTR
ENST00000373261.5	alternative 5' UTR
ENST00000436440.6	alternative 5' UTR
ENST00000436099.6	alternative 5' UTR
ENST00000419740.6	alternative 5' UTR
ENST00000487057.5	alternative 5' UTR
ENST00000487057.5	triple homeobox 1
ENST00000438914.1	SIPL protein (SIPL) pseudogene
ENST00000373257.8	MANE_select
ENST00000373257.8	lipin 3 (LIPN3L)
ENST00000632009.1	NP_075047.1
ENST00000445975.1	lipin 3 (LIPN3L)
ENST00000496565.5	lipin 3 (LIPN3L)
ENST00000491528.1	lipin 3 (LIPN3L)
ENST00000332312.4	DKFZp434A2410
ENST00000332312.4	MANE_select
ENST00000440222.1	novel pseudogene
ENST00000373233.8	MANE_select
ENST00000373233.8	chromodomain helicase DNA binding protein 6 (contains KIAA1335, FLJ34232)
ENST00000480022.1	chromodomain helicase DNA binding protein 6 (FLJ40825)
ENST00000440697.5	chromodomain helicase DNA binding protein 6 (RIGB)
ENST00000440697.5	non canonical TEC
ENST00000476641.2	chromodomain helicase DNA binding protein 6
ENST00000470470.1	chromodomain helicase DNA binding protein 6
ENST00000373222.3	chromodomain helicase DNA binding protein 6
ENST00000482596.1	chromodomain helicase DNA binding protein 6
ENST00000440647.1	chromodomain helicase DNA binding protein 6
ENST00000423903.1	lymphocyte antigen 6 complex, locus H (LY6H) pseudogene
ENST00000431589.1	putative novel transcript
ENST00000432563.1	neurofilament heavy polypeptide 200kDa (NEFH) pseudogene
ENST00000412348.1	Putative novel transcript
ENST00000373187.5	protein tyrosine phosphatase, receptor type, T (RPTPRHO, KIAA0283)
ENST00000356100.6	protein tyrosine phosphatase, receptor type, T (RPTPRHO, KIAA0283)
ENST00000373184.5	protein tyrosine phosphatase, receptor type, T (RPTPRHO, KIAA0283)
ENST00000373190.5	protein tyrosine phosphatase, receptor type, T (RPTPRHO, KIAA0283)
ENST00000373198.8	protein tyrosine phosphatase, receptor type, T (RPTPRHO, KIAA0283)
ENST00000373201.5	protein tyrosine phosphatase, receptor type, T (RPTPRHO, KIAA0283)
ENST00000373193.7	non canonical conserved
ENST00000617474.1	AT acceptor is conserved 'to' Wallaby
ENST00000617474.1	non canonical TEC
ENST00000617474.1	non canonical conserved
ENST00000485499.1	protein tyrosine phosphatase, receptor type, T (RPTPRHO, KIAA0283)
ENST00000446195.1	pseudogene similar to part of ATP5O (ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit (oligomycin sensitivity conferring protein))
ENST00000457704.2	novel transcript
ENST00000412519.1	novel transcript
ENST00000658035.1	Assembled from SLRseq reads (SRP049776)
ENST00000611791.1	CAGE supported TSS
ENST00000670415.1	Assembled from SLRseq reads (SRP049776)
ENST00000430025.1	putative novel transcript
ENST00000464473.1	peptidylprolyl isomerase A (cyclophilin A) pseudogene
ENST00000443304.1	pseudogene similar to part of NBP (nucleotide binding protein)
ENST00000450009.1	eukaryotic translation initiation factor 4E binding protein 2 pseudogene
ENST00000244020.5	MANE_select
ENST00000483871.6	splicing factor, arginine/serine-rich 6 (SRP55-2)(variant 2)
ENST00000439769.2	upstream ATG
ENST00000418998.7	CAGE supported TSS
ENST00000418998.7	MANE_select
ENST00000418998.7	upstream ATG
ENST00000649917.1	upstream ATG
ENST00000457824.5	NMD likely if extended
ENST00000494117.1	FLJ41181
ENST00000432727.1	HSPC194 pseudogene
ENST00000442482.1	putative novel transcript
ENST00000647834.1	alternative 5' UTR
ENST00000373100.7	CAGE supported TSS
ENST00000373100.7	LR annotation
ENST00000373100.7	MANE_select
ENST00000496343.6	non canonical TEC
ENST00000373030.8	MANE_select
ENST00000373030.8	chromosome 20 open reading frame 9 (C20orf9)(NGD5, CGI-53)
ENST00000373030.8	continued from dJ138B7.1.1 in Em:Z98752
ENST00000373039.4	chromosome 20 open reading frame 9 (C20orf9)(NGD5, CGI-53)
ENST00000373039.4	continued from dJ138B7.1.3 in Em:Z98752
ENST00000486243.1	chromosome 20 open reading frame 9 (C20orf9)(NGD5, CGI-53)
ENST00000476986.1	chromosome 20 open reading frame 9 (C20orf9)(NGD5, CGI-53)
ENST00000467024.5	chromosome 20 open reading frame 9 (C20orf9)(NGD5, CGI-53)
ENST00000468420.5	chromosome 20 open reading frame 9 (C20orf9)(NGD5, CGI-53)
ENST00000460014.1	chromosome 20 open reading frame 9 (C20orf9)(NGD5, CGI-53)
ENST00000461012.1	chromosome 20 open reading frame 9 (C20orf9)(NGD5, CGI-53)
ENST00000471199.1	chromosome 20 open reading frame 9 (C20orf9)(NGD5, CGI-53)
ENST00000358609.4	RPL27AP (ribosomal protein L27a pseudogene)
ENST00000217026.5	MANE_select
ENST00000217026.5	v-myb avian myeloblastosis viral oncogene homolog-like 2
ENST00000373003.2	MANE_select
ENST00000428529.1	putative novel transcript
ENST00000341197.9	MANE_select
ENST00000341197.9	NP_001092267
ENST00000423191.6	alternative 5' UTR
ENST00000372999.5	novel HMG (high mobility group) box protein similar to KIAA0737, KIAA0808 and TNRC9 (CAGF9)
ENST00000358131.5	novel HMG (high mobility group) box protein (FLJ30573) similar to KIAA0737, KIAA0808 and TNRC9 (CAGF9)
ENST00000413823.1	novel HMG (high mobility group) box protein similar to KIAA0737, KIAA0808 and TNRC9 (CAGF9)
ENST00000413823.1	this variant and variant fragment .2.3 could be part of one single variant
ENST00000372980.4	MANE_select
ENST00000342272.3	junctophilin 2 (JPH2)(JP2, JP-2)
ENST00000668835.1	Assembled from SLRseq reads (SRP049776)
ENST00000255174.3	MANE_select
ENST00000255174.3	novel protein
ENST00000372970.6	novel protein
ENST00000671199.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660003.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660003.1	Assembled from SLRseq reads (SRP049776)
ENST00000655968.1	Assembled from SLRseq reads (SRP049776)
ENST00000660638.1	Assembled from SLRseq reads (SRP049776)
ENST00000660193.1	Assembled from SLRseq reads (SRP049776)
ENST00000664132.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435163.5	Assembled from SLRseq reads (SRP049776)
ENST00000656858.1	Assembled from SLRseq reads (SRP049776)
ENST00000342560.10	MANE_select
ENST00000342560.10	ganglioside-induced differentiation-associated protein 1-like 1 (FLJ31689)
ENST00000438466.5	ganglioside-induced differentiation-associated protein 1-like 1
ENST00000372952.7	ganglioside-induced differentiation-associated protein 1-like 1
ENST00000445952.2	ganglioside-induced differentiation-associated protein 1-like 1
ENST00000447658.1	ganglioside-induced differentiation-associated protein 1-like 1
ENST00000396825.4	MANE_select
ENST00000217043.4	MANE_select
ENST00000217043.4	R3HDML domain (binds single-stranded nucleic acids) containing-like (similar to trypsin inhibitor proteins)
ENST00000438702.1	novel transcript
ENST00000430481.2	novel transcript
ENST00000316673.8	hepatocyte nuclear factor 4, alpha (TCF, MODY1, NR2A1, TCF14, NR2A21)
ENST00000316099.9	MANE_select
ENST00000316099.9	hepatocyte nuclear factor 4, alpha (TCF, MODY1, NR2A1, TCF14, NR2A21)
ENST00000372920.1	hepatocyte nuclear factor 4, alpha (TCF, MODY1, NR2A1, TCF14, NR2A21)
ENST00000443598.6	hepatocyte nuclear factor 4, alpha (TCF, MODY1, NR2A1, TCF14, NR2A21)
ENST00000452481.1	novel transcript
ENST00000455642.1	putative novel transcript
ENST00000262605.9	MANE_select
ENST00000262605.9	alternative 5' UTR
ENST00000372904.7	FLJ31616
ENST00000461134.1	FLJ43136
ENST00000411544.5	alternative 3' UTR
ENST00000342374.5	MANE_select
ENST00000372891.7	alternative 5' UTR
ENST00000372892.7	alternative 5' UTR
ENST00000372889.5	alternative 5' UTR
ENST00000372886.6	MANE_select
ENST00000372886.6	alternative 5' UTR
ENST00000349959.3	alternative 5' UTR
ENST00000464097.5	DKFZp6667G2419
ENST00000372874.9	MANE_select
ENST00000427303.2	Assembled from SLRseq reads (SRP049776)
ENST00000372868.6	alternative 5' UTR
ENST00000497421.1	FLJ90214
ENST00000190983.5	MANE_select
ENST00000471629.1	FLJ26149
ENST00000372861.5	MANE_select
ENST00000372851.8	FLJ44857, DKFZp686D0748
ENST00000372851.8	MANE_select
ENST00000541604.2	NP_001192246.1
ENST00000650868.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000353703.9	MANE_select
ENST00000353703.9	alternative 5' UTR
ENST00000428262.1	alternative 5' UTR
ENST00000445830.1	alternative 5' UTR
ENST00000255136.8	CAGE supported TSS
ENST00000217073.7	CAGE supported TSS
ENST00000217073.7	MANE_select
ENST00000490798.6	novel transcript
ENST00000476056.6	novel transcript
ENST00000372819.5	FLJ23107
ENST00000465761.1	novel transcript
ENST00000474208.5	novel transcript
ENST00000489068.1	novel transcript
ENST00000482486.1	novel transcript
ENST00000372813.4	FLJ20587
ENST00000372813.4	MANE_select
ENST00000434401.1	FLJ32636
ENST00000445571.1	non canonical TEC
ENST00000445571.1	non-canonical splice site between exons 2 and 3
ENST00000372806.8	MANE_select
ENST00000537075.3	MANE_select
ENST00000537075.3	genebuild_only_MANE
ENST00000372785.3	MANE_select
ENST00000243924.4	MANE_select
ENST00000372781.4	MANE_select
ENST00000372769.4	MANE_select
ENST00000338380.2	MANE_select
ENST00000372754.5	matrilin 4, variant 2 (contains FLJ14417)
ENST00000372754.5	non canonical U12
ENST00000372754.5	non canonical conserved
ENST00000372756.5	matrilin 4, variant 1 (contains FLJ14417)
ENST00000372756.5	non canonical U12
ENST00000353917.10	EnsCodingFull|3P|XLOC_043667|TCONS_00174494:1.72741
ENST00000360607.10	non canonical U12
ENST00000343694.8	MANE_select
ENST00000372733.3	MANE_select
ENST00000372733.3	syndecan 4 (amphiglycan, ryudocan)
ENST00000372727.5	alternative 5' UTR
ENST00000243918.10	MANE_select
ENST00000453003.1	alternative 5' UTR
ENST00000372726.5	MANE_select
ENST00000452541.1	NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15 kDa (NDUFB4) pseudogene
ENST00000372723.7	alternative 5' UTR
ENST00000372722.7	NP_001041691.1
ENST00000357275.6	alternative 5' UTR
ENST00000372712.6	alternative 5' UTR
ENST00000372710.4	upstream ATG
ENST00000638246.1	alternative 3' UTR
ENST00000638612.1	alternative 3' UTR
ENST00000640996.1	alternative 3' UTR
ENST00000640666.1	alternative 3' UTR
ENST00000638938.1	alternative 3' UTR
ENST00000640585.1	alternative 3' UTR
ENST00000640692.1	alternative 3' UTR
ENST00000279036.12	MANE_select
ENST00000638745.1	alternative 3' UTR
ENST00000640194.1	alternative 3' UTR
ENST00000545755.3	confirm experimentally
ENST00000638710.1	alternative 3' UTR
ENST00000638415.1	alternative 3' UTR
ENST00000640549.1	alternative 3' UTR
ENST00000638927.1	alternative 3' UTR
ENST00000424705.2	alternative 3' UTR
ENST00000638864.1	alternative 3' UTR
ENST00000372676.8	MANE_select
ENST00000429598.1	ribosomal protein L5 pseudogene 2
ENST00000217428.7	MANE_select
ENST00000372670.8	MANE_select
ENST00000354280.9	MANE_select
ENST00000409554.1	not organism-supported
ENST00000496898.1	FLJ44034
ENST00000289953.3	MANE_select
ENST00000326000.2	MANE_select
ENST00000372643.4	MANE_select
ENST00000324384.4	MANE_select
ENST00000356562.6	alternative 5' UTR
ENST00000305479.3	MANE_select
ENST00000279058.4	MANE_select
ENST00000440968.1	heterogenous nuclear ribonucleoprotein A1 pseudogene 3
ENST00000243938.9	MANE_select
ENST00000372622.8	MANE_select
ENST00000435014.1	not organism-supported
ENST00000356455.9	MANE_select
ENST00000372555.8	MANE_select
ENST00000491381.6	MANE_select
ENST00000466252.5	chromosome 20 open reading frame 161
ENST00000217455.9	MANE_select
ENST00000652771.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000486165.5	novel protein
ENST00000457981.5	novel protein
ENST00000426915.1	novel protein
ENST00000255152.3	MANE_select
ENST00000372523.1	MANE_select
ENST00000372519.3	chromosome 20 open reading frame 165
ENST00000372518.5	MANE_select
ENST00000372484.8	NP_000299.2
ENST00000677394.1	alternative 5' UTR
ENST00000678078.1	alternative 3' UTR
ENST00000676526.1	alternative 3' UTR
ENST00000607212.2	EST evidence: DB145803.1
ENST00000354880.9	NP_001161066.1
ENST00000646241.3	CAGE supported TSS
ENST00000646241.3	LR annotation
ENST00000646241.3	MANE_select
ENST00000191018.9	CAGE supported TSS
ENST00000191018.9	NP_001121167.1
ENST00000191018.9	Swiss-Prot isoform: P10619.2  (480 aa)
ENST00000191018.9	alternative 5' UTR
ENST00000678939.1	CAGE supported TSS
ENST00000679343.1	protective protein for beta-galactosidase (galactosialidosis) (GSL, CTSA, GLB2, NGBE, PPCA)
ENST00000678025.1	CAGE supported TSS
ENST00000419493.3	CAGE supported TSS
ENST00000419493.3	EST evidence: BM989796.1
ENST00000678331.1	CAGE supported TSS
ENST00000676657.1	CAGE supported TSS
ENST00000607482.6	CAGE supported TSS
ENST00000607482.6	alternative 5' UTR
ENST00000372459.7	CAGE supported TSS
ENST00000372459.7	alternative 5' UTR
ENST00000676967.1	CAGE supported TSS
ENST00000372431.8	MANE_select
ENST00000372420.5	Phospholipid Transfer Protein (Lipid Transfer Protein II) (variant 2)
ENST00000477313.5	alternative 5' UTR
ENST00000647856.1	CAGE supported TSS
ENST00000372409.8	MANE_select
ENST00000479348.2	novel transcript
ENST00000322927.3	MANE_select
ENST00000322927.3	Zinc finger protein 335
ENST00000475002.1	Zinc finger protein 335
ENST00000476822.1	Zinc finger protein 335
ENST00000494955.1	Zinc finger protein 335
ENST00000449155.1	ferritin, light polypeptide pseudogene
ENST00000372330.3	MANE_select
ENST00000372330.3	matrix metalloproteinase 9 (gelatinase B, 92kD gelatinase, 92kD type IV collagenase) (CLG4B)
ENST00000419897.1	Putative novel transcipt
ENST00000243964.7	MANE_select
ENST00000290231.11	MANE_select
ENST00000290231.11	nuclear receptor coactivator 5 (KIAA1637)
ENST00000372291.3	nuclear receptor coactivator 5
ENST00000440687.1	ribosomal protein L13 pseudogene 2
ENST00000372285.8	MANE_select
ENST00000372285.8	tumor necrosis factor receptor superfamily, member 5
ENST00000372276.7	tumor necrosis factor receptor superfamily, member 5
ENST00000466205.5	tumor necrosis factor receptor superfamily, member 5
ENST00000489304.5	tumor necrosis factor receptor superfamily, member 5
ENST00000477696.5	tumor necrosis factor receptor superfamily, member 5
ENST00000461171.1	tumor necrosis factor receptor superfamily, member 5
ENST00000450586.1	putative novel transcript
ENST00000537909.4	MANE_select
ENST00000537909.4	cadherin-like 22
ENST00000474438.1	cadherin-like 22
ENST00000372230.10	MANE_select
ENST00000372230.10	ovarian cancer overexpressed 1 (CGI-15)
ENST00000493599.1	ovarian cancer overexpressed 1 (FLJ37039)
ENST00000372227.5	alternative 5' UTR
ENST00000372227.5	alternatively spliced in 5' UTR, shares CDS with bA394O2.1.1
ENST00000372227.5	ovarian cancer overexpressed 1
ENST00000243896.6	alternative 5' UTR
ENST00000243896.6	alternatively spliced in 5' UTR, shares CDS with bA394O2.1.1
ENST00000243896.6	ovarian cancer overexpressed 1
ENST00000480329.5	ovarian cancer overexpressed 1
ENST00000487729.5	ovarian cancer overexpressed 1
ENST00000484318.5	ovarian cancer overexpressed 1
ENST00000481809.1	ovarian cancer overexpressed 1
ENST00000420518.5	ovarian cancer overexpressed 1
ENST00000424568.1	ovarian cancer overexpressed 1
ENST00000484188.1	ovarian cancer overexpressed 1
ENST00000484188.1	this variant and either of variant fragments .1.11 or .1.10 could be part of one single variant
ENST00000651935.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000467800.5	engulfment and cell motility 2 (ced-12 homolog, C. elegans (CED12) (DKFZp761J1417)
ENST00000372176.5	engulfment and cell motility 2 (ced-12 homolog, C. elegans) (CED12)
ENST00000372176.5	non canonical TEC
ENST00000290246.11	MANE_select
ENST00000290246.11	engulfment and cell motility 2 (ced-12 homolog, C. elegans) (CED12) (KIAA1834)
ENST00000452857.5	engulfment and cell motility 2 (ced-12 homolog, C. elegans (CED12)
ENST00000352077.6	engulfment and cell motility 2 (ced-12 homolog, C. elegans (CED12)
ENST00000464448.1	engulfment and cell motility 2 (ced-12 homolog, C. elegans (CED12)
ENST00000425546.5	engulfment and cell motility 2 (ced-12 homolog, C. elegans (CED12)
ENST00000462491.5	engulfment and cell motility 2 (ced-12 homolog, C. elegans) (CED12)
ENST00000481852.5	engulfment and cell motility 2 (ced-12 homolog, C. elegans (CED12)
ENST00000488853.5	engulfment and cell motility 2 (ced-12 homolog, C. elegans) (CED12)
ENST00000450812.5	engulfment and cell motility 2 (ced-12 homolog, C. elegans) (CED12) (FLJ32470)
ENST00000480042.5	engulfment and cell motility 2 (ced-12 homolog, C. elegans (CED12)
ENST00000469801.5	engulfment and cell motility 2 (ced-12 homolog, C. elegans) (CED12)
ENST00000460474.5	engulfment and cell motility 2 (ced-12 homolog, C. elegans (CED12)
ENST00000497412.5	engulfment and cell motility 2 (ced-12 homolog, C. elegans) (CED12)
ENST00000487583.5	engulfment and cell motility 2 (ced-12 homolog, C. elegans) (CED12)
ENST00000462593.1	engulfment and cell motility 2 (ced-12 homolog, C. elegans) (CED12)
ENST00000400371.2	novel transcript (DKFZp547G0215)
ENST00000433469.2	contains Zinc finger C-x8-C-x5-C-x3-H type (and similar) domains
ENST00000433469.2	makorin (MKRN1 or MKRN3) ring finger protein pseudogene
ENST00000457685.6	upstream uORF
ENST00000625284.2	NP_001257426.1
ENST00000596323.1	alternative 5' UTR
ENST00000279028.3	MANE_select
ENST00000279028.3	RP23-395E18.4 in mouse
ENST00000279028.3	novel protein
ENST00000279027.9	MANE_select
ENST00000279027.9	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 (NADC3, SDCT2)
ENST00000413164.6	NP_001180268
ENST00000468915.5	alternative 5' UTR
ENST00000464518.1	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 (NADC3, SDCT2)
ENST00000450298.5	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 (NADC3, SDCT2)
ENST00000420568.5	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 (NADC3, SDCT2)
ENST00000372121.5	alternative 5' UTR
ENST00000417157.2	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 (NADC3, SDCT2)
ENST00000372114.4	MANE_select
ENST00000372102.3	chromosome 20 open reading frame 64 (Nori-2p, dJ28H20.2) (C20orf64)(PRPK, Nori-2, dJ101A2.2)
ENST00000359271.4	MANE_select
ENST00000423396.1	RPL13 (ribosomal protein L13) pseudogene
ENST00000327619.10	MANE_select
ENST00000327619.10	eyes absent homolog 2 (Drosophila) (EYA2)
ENST00000497062.6	eyes absent homolog 2 (Drosophila) (EYA2)
ENST00000497062.6	non canonical TEC
ENST00000497428.1	eyes absent homolog 2 (Drosophila) (EYA2)
ENST00000479843.5	eyes absent homolog 2 (Drosophila) (EYA2)
ENST00000471081.1	eyes absent homolog 2 (Drosophila) (EYA2)
ENST00000458636.2	eyes absent homolog 2 (Drosophila) (EYA2)
ENST00000475856.1	eyes absent homolog 2 (Drosophila) (EYA2)
ENST00000414085.1	novel transcript
ENST00000432657.1	glyceraldehyde 3-phosphate dehydrogenase (GAPD) pseudogene
ENST00000429337.1	RPL27A (ribosomal protein L27A) pseudogene
ENST00000400363.2	ribosomal protein S2 (RPS2) pseudogene
ENST00000311275.11	KIAA1125
ENST00000468376.2	DKFZp564P1772
ENST00000435836.5	protein kinase C binding protein 1, variant 4 (alternative 5' UTR)
ENST00000446894.5	protein kinase C binding protein 1, variant 6 (alternative 5' UTR)
ENST00000441977.1	protein kinase C binding protein 1
ENST00000413818.2	putative novel transcript
ENST00000655691.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000437920.1	novel transcript
ENST00000425552.1	ribosomal protein L35a pseudogene
ENST00000371998.8	MANE_select
ENST00000371998.8	nuclear receptor coactivator 3 (ACTR, AIB1, RAC3, CTG26, p/CIP, CAGH16, TNRC14, TNRC16, TRAM-1)
ENST00000372004.7	nuclear receptor coactivator 3 (ACTR, AIB1, RAC3, CTG26, p/CIP, CAGH16, TNRC14, TNRC16, TRAM-1)
ENST00000371997.3	nuclear receptor coactivator 3 (ACTR, AIB1, RAC3, CTG26, p/CIP, CAGH16, TNRC14, TNRC16, TRAM-1)
ENST00000490248.1	nuclear receptor coactivator 3 (ACTR, AIB1, RAC3, CTG26, p/CIP, CAGH16, TNRC14, TNRC16, TRAM-1)
ENST00000497292.1	nuclear receptor coactivator 3 (ACTR, AIB1, RAC3, CTG26, p/CIP, CAGH16, TNRC14, TNRC16, TRAM-1)
ENST00000448675.1	ribosomal protein S3A (RPS3A) pseudogene
ENST00000484875.5	alternative 5' UTR
ENST00000463221.2	QC splicing correct
ENST00000437955.1	alternative 5' UTR
ENST00000398959.2	spermidine synthase pseudogene 1
ENST00000666669.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000431915.1	putative novel transcript
ENST00000662435.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659337.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000416646.1	putative novel transcript
ENST00000665980.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000673791.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000655778.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671461.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669282.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000428999.1	putative novel transcript
ENST00000425385.1	putative novel transcript
ENST00000651247.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000653312.1	Assembled from SLRseq reads (SRP049776)
ENST00000655183.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668815.1	Assembled from SLRseq reads (SRP049776)
ENST00000651871.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000666125.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669689.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669689.1	novel transcript (LOC284749)
ENST00000669055.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663665.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670744.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670842.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667132.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671184.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660785.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425021.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000416742.5	novel transcript (LOC284749)
ENST00000652930.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655482.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655482.1	Assembled from RACEseq reads
ENST00000433094.1	novel transcript (DKFZp667F0617) (LOC284749)
ENST00000446280.1	putative novel transcript
ENST00000655426.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665877.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000482556.5	P-Rex1 (PREX1)
ENST00000371941.4	MANE_select
ENST00000496915.1	novel transcript
ENST00000650933.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000371917.5	ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
ENST00000371917.5	MANE_select
ENST00000679436.1	NAGNAG splice site
ENST00000493140.1	ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
ENST00000433229.1	synaptosomal-associated protein, 23 kDa pseudogene
ENST00000417781.5	putative novel transcript
ENST00000428190.1	putative novel transcript
ENST00000656931.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000262982.3	MANE_select
ENST00000371856.7	MANE_select
ENST00000340954.11	alternative 5' UTR
ENST00000340954.11	alternatively spliced 5' UTR; shares CDS with dJ470L14.2.2 and dJ470L14.2.3
ENST00000340954.11	staufen, RNA binding protein (Drosophila) (variant a)
ENST00000347458.9	alternative 5' UTR
ENST00000347458.9	alternatively spliced 5' UTR; shares CDS with dJ470L14.2.2 and dJ470L14.2.4
ENST00000347458.9	staufen, RNA-binding protein (Drosophila) (variant a)
ENST00000360426.8	alternative 5' UTR
ENST00000360426.8	alternatively spliced 5' UTR; shares CDS with dJ470L14.2.3 and dJ470L14.2.4
ENST00000360426.8	staufen, RNA binding protein (Drosophila) (variant a)
ENST00000371792.5	staufen, RNA binding protein (Drosophila)
ENST00000371802.5	staufen, RNA binding protein (Drosophila)
ENST00000437404.2	alternative 5' UTR
ENST00000437404.2	alternatively spliced 5' UTR; shares partial CDS with dJ470L14.2.6
ENST00000437404.2	staufen, RNA binding protein (Drosophila)
ENST00000456866.2	staufen, RNA binding protein (Drosophila)
ENST00000484427.5	DKFZp686H1510
ENST00000618172.5	CAGE supported TSS
ENST00000618172.5	MANE_select
ENST00000471144.1	FLJ45185, DKFZp667N057
ENST00000371754.8	FLJ39275
ENST00000371752.5	FLJ13774
ENST00000396105.6	MANE_select
ENST00000396105.6	genebuild_only_MANE
ENST00000371744.5	FLJ11277
ENST00000371744.5	alternative 5' UTR
ENST00000455070.1	FLJ12579
ENST00000371743.8	Assembled from SLRseq reads (SRP049776)
ENST00000428008.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667889.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000326677.9	putative novel transcript
ENST00000652916.1	Assembled from SLRseq reads (SRP049776)
ENST00000620594.2	Assembled from SLRseq reads (SRP049776)
ENST00000659056.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000371741.6	MANE_select
ENST00000635465.1	alternative 5' UTR
ENST00000244043.5	MANE_select
ENST00000371711.4	MANE_select
ENST00000361573.3	AT-AC splicing between exons 9 and 10
ENST00000361573.3	KIAA0939, DKFZp686D0256
ENST00000361573.3	MANE_select
ENST00000490250.1	FLJ42500
ENST00000289431.10	MANE_select
ENST00000289431.10	spermatogenesis associated protein 2, PD1 (KIAA0757)
ENST00000244061.6	MANE_select
ENST00000244061.6	supported by FGENES and GENSCAN
ENST00000244061.6	zinc finger protein 313
ENST00000422599.1	keratin 18 pseudogene 4
ENST00000244050.3	MANE_select
ENST00000244050.3	snail 1 (drosophila homolog), zinc finger protein
ENST00000431460.1	putative novel transcript
ENST00000371674.8	MANE_select
ENST00000396059.7	DKFZp686G1080, DKFZp686I21199
ENST00000340309.7	alternative 5' UTR
ENST00000371652.9	MANE_select
ENST00000670975.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652554.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000669734.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658174.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435301.2	Could link to .2, but an exact structure is not known at this time
ENST00000435301.2	putative novel transcript
ENST00000444478.1	putative novel transcript
ENST00000451960.1	putative novel transcript
ENST00000670659.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668708.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659473.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000411453.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000427333.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000427333.6	Variant 2
ENST00000664618.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661469.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665536.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000303004.5	CCAAT/enhancer binding protein (C/EBP), beta
ENST00000303004.5	MANE_select
ENST00000425497.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425497.6	novel transcript
ENST00000445003.5	novel transcript
ENST00000422459.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663009.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663009.1	Assembled from RACEseq reads
ENST00000663009.1	Assembled from SLRseq reads (SRP049776)
ENST00000663009.1	novel transcript
ENST00000658717.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656332.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000421019.1	novel transcript
ENST00000669676.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664104.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655925.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662382.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663616.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000371639.8	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000371639.8	ambiguous CDS
ENST00000371639.8	novel transcript (FLJ33286) (LOC284751)
ENST00000661795.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653970.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655316.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655675.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653657.1	Assembled from SLRseq reads (SRP049776)
ENST00000671482.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653865.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000457853.1	novel transcript (LOC284751)
ENST00000441214.1	novel transcript
ENST00000371621.5	MANE_select
ENST00000431019.1	FLJ43874
ENST00000327979.8	MANE_select
ENST00000462493.1	FLJ32230
ENST00000371610.7	MANE_select
ENST00000358791.9	FLJ20495
ENST00000371608.7	upstream ATG
ENST00000609336.5	CAGE supported TSS
ENST00000445038.5	CAGE supported TSS
ENST00000463943.1	CAGE supported TSS
ENST00000371602.9	alternative 5' UTR
ENST00000621696.5	MANE_select
ENST00000621696.5	alternative 5' UTR
ENST00000396029.8	alternative 5' UTR
ENST00000396032.8	alternative 5' UTR
ENST00000349014.8	alternative 5' UTR
ENST00000614698.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655542.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664246.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000371588.10	MANE_select
ENST00000244051.3	MANE_select
ENST00000371571.5	MANE_select
ENST00000371571.5	alternative 5' UTR
ENST00000439216.5	alternative 5' UTR
ENST00000433903.5	alternative 5' UTR
ENST00000447736.1	alternative 5' UTR
ENST00000371564.8	MANE_select
ENST00000338821.6	FLJ23963
ENST00000338821.6	MANE_select
ENST00000477492.1	not organism-supported
ENST00000217086.9	MANE_select
ENST00000438154.1	FLJ38966
ENST00000371523.8	FLJ12628
ENST00000346617.8	FLJ10882
ENST00000216923.5	FLJ10734
ENST00000216923.5	MANE_select
ENST00000665639.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656056.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667866.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659137.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656367.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655649.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658665.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657861.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653220.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655345.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667358.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662344.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655588.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663351.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655981.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669837.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666722.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663247.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663974.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656501.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662183.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666751.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662569.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665687.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661784.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666356.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660723.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661039.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660314.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656362.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665325.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655073.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669578.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665561.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668857.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656040.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661530.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661421.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653245.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662129.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669548.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654945.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659204.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670088.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666070.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661770.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664050.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656343.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663698.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413070.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448013.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668673.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655419.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653784.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661373.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425279.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661304.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666117.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669032.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662618.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663531.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652426.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000371497.10	MANE_select
ENST00000603338.2	NP_001180350.1
ENST00000605656.2	alternative 3' UTR
ENST00000653126.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000436286.2	FLJ31870
ENST00000424252.2	FLJ14031
ENST00000371471.7	MANE_select
ENST00000431687.5	alternative 5' UTR
ENST00000663196.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656184.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448484.5	DKFZp686B1850
ENST00000216862.8	MANE_select
ENST00000655028.1	Assembled from SLRseq reads (SRP049776)
ENST00000371419.7	MANE_select
ENST00000650710.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000262593.10	MANE_select
ENST00000450623.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667361.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000598445.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660487.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664886.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662550.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654685.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608080.1	nested 454 RNA-Seq supported
ENST00000433766.1	FLJ31488
ENST00000661549.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651220.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000656795.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000064571.3	MANE_select
ENST00000243911.2	MANE_select
ENST00000371384.4	MANE_select
ENST00000371356.6	alternative 5' UTR
ENST00000395915.8	MANE_select
ENST00000395915.8	alternative 5' UTR
ENST00000312783.10	alternative 5' UTR
ENST00000395913.7	alternative 5' UTR
ENST00000441357.5	alternative 5' UTR
ENST00000420474.5	alternative 5' UTR
ENST00000422322.5	alternative 5' UTR
ENST00000456249.5	alternative 5' UTR
ENST00000451915.1	alternative 5' UTR
ENST00000415828.5	alternative 5' UTR
ENST00000428552.1	alternative 5' UTR
ENST00000217109.9	MANE_select
ENST00000452950.1	alternative 5' UTR
ENST00000679887.1	CAGE supported TSS
ENST00000679887.1	MANE_select
ENST00000357348.10	MANE_select
ENST00000243913.8	FLJ16060
ENST00000371328.5	MANE_select
ENST00000371325.1	MANE_select
ENST00000653535.1	Assembled from SLRseq reads (SRP049776)
ENST00000434176.1	this gene fragment and gene fragment RP5-843L14.1-001 are part of the same gene; the exact exon structure linking the fragments remains to be determined
ENST00000437350.1	this gene fragment and gene fragment RP5-843L14.3-001 are part of the same gene; the exact exon structure linking the fragments remains to be determined
ENST00000201031.3	MANE_select
ENST00000442780.1	non canonical polymorphism
ENST00000442780.1	non-canonical splice acceptor site between exons 1 and 2
ENST00000652038.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000671579.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000395863.8	MANE_select
ENST00000445956.1	putative novel transcript
ENST00000371263.8	MANE_select
ENST00000371242.6	alternative 5' UTR
ENST00000395841.7	MANE_select
ENST00000411894.5	alternative 5' UTR
ENST00000429339.5	alternative 5' UTR
ENST00000395840.6	alternative 5' UTR
ENST00000452119.1	alternative 5' UTR
ENST00000462438.1	FLJ44036
ENST00000543500.3	MANE_select
ENST00000543500.3	not best-in-genome evidence
ENST00000670533.1	Assembled from SLRseq reads (SRP049776)
ENST00000417346.1	FLJ39107
ENST00000356208.10	MANE_select
ENST00000344785.10	ssDNA binding protein SEB4D (HSRNASEB)
ENST00000371219.2	alternative 5' UTR
ENST00000652193.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000423479.7	NP_001255972.1
ENST00000608263.5	alternative 5' UTR
ENST00000609232.5	alternative 5' UTR
ENST00000429804.7	NP_001255975.1
ENST00000371196.6	alternative 5' UTR
ENST00000608720.5	NMD likely if extended
ENST00000608858.5	NMD likely if extended
ENST00000608158.5	alternative 5' UTR
ENST00000467047.1	DKFZp779F2021
ENST00000319441.6	MANE_select
ENST00000395822.7	FLJ16296
ENST00000371173.8	MANE_select
ENST00000461547.5	FLJ46548
ENST00000395816.7	alternative 5' UTR
ENST00000341744.8	MANE_select
ENST00000614771.2	CAGE supported TSS
ENST00000371169.1	FLJ46124
ENST00000650783.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000371168.4	MANE_select
ENST00000650934.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000493688.5	FLJ33021
ENST00000495058.5	DKFZp313O0420
ENST00000244040.4	FLJ30205, FLJ33861
ENST00000244040.4	MANE_select
ENST00000475243.6	FLJ13179
ENST00000475243.6	MANE_select
ENST00000265619.6	FLJ45319
ENST00000463370.5	FLJ41544
ENST00000476395.1	FLJ46565
ENST00000371149.8	FLJ90166
ENST00000371149.8	MANE_select
ENST00000427140.5	FLJ30075
ENST00000661476.1	Assembled from SLRseq reads (SRP049776)
ENST00000447767.1	FLJ34385
ENST00000458280.5	alternative 5' UTR
ENST00000355957.9	NP_001128245.1
ENST00000312283.12	alternative 5' UTR
ENST00000412911.5	alternative 5' UTR
ENST00000371141.8	MANE_select
ENST00000358029.8	NP_001128244.1
ENST00000468590.1	not organism-supported
ENST00000356091.11	FLJ11583
ENST00000356091.11	MANE_select
ENST00000416241.1	pseudogene similar to KIAA0233
ENST00000424094.6	SANG (GNAS antisense transcript)
ENST00000313949.11	NMD exception
ENST00000313949.11	SCG6
ENST00000371098.6	NMD exception
ENST00000371098.6	SCG6
ENST00000453292.6	/gt tg\\\\ splicing between exons 2 and 3
ENST00000453292.6	NMD exception
ENST00000453292.6	SCG6
ENST00000453292.6	non canonical conserved
ENST00000419558.6	NMD exception
ENST00000419558.6	SCG6
ENST00000371075.7	NMD exception
ENST00000371075.7	SCG6
ENST00000371075.7	gt tg splicing between exons 3 and 4
ENST00000371075.7	non canonical conserved
ENST00000462499.5	/gt tg\\\\ splicing between exons 2 and 3
ENST00000462499.5	non canonical conserved
ENST00000663479.1	/gt tg\\\\ splicing between exons 3 and 4
ENST00000663479.1	non canonical conserved
ENST00000467227.5	/gt tg\\\\ splicing between exons 3 and 4
ENST00000467227.5	non canonical conserved
ENST00000676826.1	/gt tg\\\\ splicing between exons 3 and 4
ENST00000676826.1	XL-alpha-s
ENST00000676826.1	non canonical conserved
ENST00000371100.9	CAGE supported TSS
ENST00000371100.9	XL-alpha-s
ENST00000306120.4	ALEX
ENST00000371099.6	XLb1
ENST00000371102.8	/gt tg\\\\ splicing between exons 2 and 3
ENST00000371102.8	XL-alpha-s
ENST00000371102.8	non canonical conserved
ENST00000464624.6	XLb2
ENST00000349036.8	XL-alpha-s
ENST00000488546.5	/gt tg\\\\ splicing between exons 2 and 3
ENST00000488546.5	non canonical conserved
ENST00000468895.5	/gt tg\\\\ splicing between exons 2 and 3
ENST00000468895.5	non canonical conserved
ENST00000485673.5	/gt tg\\\\ splicing between exons 2 and 3
ENST00000485673.5	non canonical conserved
ENST00000470512.5	/gt tg\\\\ splicing between exons 3 and 4
ENST00000470512.5	non canonical conserved
ENST00000478585.5	/gt tg\\\\ splicing between exons 2 and 3
ENST00000478585.5	non canonical conserved
ENST00000480232.5	/gt tg\\\\ splicing between exons 4 and 5
ENST00000480232.5	non canonical conserved
ENST00000484504.5	GNAS complex locus novel transcript
ENST00000461152.6	non canonical conserved
ENST00000371095.7	/gt tg\\\\ splicing between exons 2 and 3
ENST00000371095.7	alpha-s-1
ENST00000371095.7	non canonical conserved
ENST00000265620.11	alpha-s-1
ENST00000354359.12	/gt tg\\\\ splicing between exons 3 and 4
ENST00000354359.12	alpha-s-1
ENST00000354359.12	non canonical conserved
ENST00000371085.8	CAGE supported TSS
ENST00000371085.8	FLJ22911
ENST00000371085.8	MANE_select
ENST00000371085.8	alpha-s-1
ENST00000492907.5	/gt tg\\\\ splicing between exons 2 and 3
ENST00000492907.5	non canonical conserved
ENST00000487862.5	/gt tg\\\\ splicing between exons 1 and 2
ENST00000487862.5	FLJ36215
ENST00000487862.5	non canonical conserved
ENST00000496934.5	FLJ30300
ENST00000476196.5	FLJ16311
ENST00000652204.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000652272.2	MANE_select
ENST00000652272.2	upstream ATG
ENST00000478389.5	FLJ45523
ENST00000681416.1	alternative 3' UTR
ENST00000217131.6	MANE_select
ENST00000217133.2	MANE_select
ENST00000243997.8	FLJ22903
ENST00000243997.8	MANE_select
ENST00000355937.9	MANE_select
ENST00000637017.1	DKFZp667G1522
ENST00000337938.7	MANE_select
ENST00000371025.7	NP_001289385
ENST00000654060.1	Assembled from SLRseq reads (SRP049776)
ENST00000655291.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000359926.7	FLJ25922
ENST00000434923.1	alternative 5' UTR
ENST00000371015.6	FLJ34313
ENST00000371015.6	MANE_select
ENST00000492611.5	CAGE supported TSS
ENST00000473657.1	FLJ33493
ENST00000668717.1	Assembled from SLRseq reads (SRP049776)
ENST00000663583.1	Assembled from SLRseq reads (SRP049776)
ENST00000357552.8	/at-ac\\ splicing between exons 5 and 6
ENST00000357552.8	DKFZp686I1629, DKFZp68601832
ENST00000357552.8	MANE_select
ENST00000446834.5	/at-ac\ splicing between exons 5 and 6
ENST00000476314.1	/at-ac\ splicing between exons 2 and 3
ENST00000425931.1	/at-ac\ splicing between exons 4 and 5
ENST00000358293.7	FLJ43083
ENST00000360816.8	MANE_select
ENST00000360816.8	alternative 5' UTR
ENST00000421092.1	alternative 5' UTR
ENST00000370996.5	DKFZp781L2441
ENST00000370996.5	MANE_select
ENST00000348616.9	MANE_select
ENST00000350849.10	FLJ23897
ENST00000660831.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000625080.1	novel protein (FLJ33860)
ENST00000654397.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654258.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000426753.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426753.6	novel transcript (LOC284757)
ENST00000662790.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666811.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665518.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663620.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653415.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654422.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655737.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659494.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661019.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658147.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658620.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656236.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654038.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653814.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000428772.5	novel transcript (LOC284757)
ENST00000661569.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655034.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000431181.5	novel transcript
ENST00000431181.5	novel transcript (LOC284757)
ENST00000659996.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657952.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656658.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662972.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653739.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664304.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655816.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654306.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664016.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654943.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664403.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663065.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662456.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668954.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000427691.5	novel transcript (LOC284757)
ENST00000671388.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664414.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657038.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671305.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660397.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657582.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000439507.5	novel transcript (LOC284757)
ENST00000457508.1	novel transcript (LOC284757)
ENST00000660970.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000458422.5	novel transcript (LOC284757)
ENST00000664147.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660093.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668055.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665017.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665017.1	Assembled from SLRseq reads (SRP049776)
ENST00000661179.1	Assembled from SLRseq reads (SRP049776)
ENST00000657541.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664219.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660044.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667249.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653451.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659500.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654960.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667664.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665114.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659856.1	Assembled from SLRseq reads (SRP049776)
ENST00000668275.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652813.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655544.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000432910.5	novel transcript (FLJ35486) (LOC284757)
ENST00000667581.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663582.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000437035.5	novel transcript (LOC284757)
ENST00000421257.1	novel transcript (LOC284757)
ENST00000427820.1	novel transcript (LOC284757)
ENST00000663127.1	Assembled from RACEseq reads
ENST00000424648.1	cytochrome c oxidase II-like (pseudogene)
ENST00000651345.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000666054.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653900.1	Assembled from SLRseq reads (SRP049776)
ENST00000420710.1	putative novel transcript
ENST00000664708.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000441660.1	putative novel transcript
ENST00000614565.5	MANE_select
ENST00000650768.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000671196.1	Assembled from SLRseq reads (SRP049776)
ENST00000662116.1	Assembled from SLRseq reads (SRP049776)
ENST00000661292.1	Assembled from SLRseq reads (SRP049776)
ENST00000662646.1	Assembled from SLRseq reads (SRP049776)
ENST00000654910.1	Assembled from SLRseq reads (SRP049776)
ENST00000659635.1	Assembled from SLRseq reads (SRP049776)
ENST00000317652.1	novel protein (FLJ40547)
ENST00000447909.1	drawn to PmeI vectorette bubble site at 3' end
ENST00000447909.1	exon 1 from dotter alignment
ENST00000447909.1	putative novel transcript
ENST00000442888.1	putative novel transcript
ENST00000488539.1	TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135 kDa (TAF2C, TAF4A, TAF2C1, TAFII130, TAFII135)
ENST00000486599.1	TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135 kDa (TAF2C, TAF4A, TAF2C1, TAFII130, TAFII135)
ENST00000442115.1	RPL17 (ribosomal protein L17) pseudogene
ENST00000370915.5	chromosome 20 open reading frame 40 (similar to Pleurodeles waltlii RAP55 protein)
ENST00000279068.11	MANE_select
ENST00000400318.6	chromosome 20 open reading frame 40 (similar to Pleurodeles waltlii RAP55 protein)
ENST00000279069.11	chromosome 20 open reading frame 40 (similar to Pleurodeles waltlii RAP55 protein)
ENST00000361670.3	chromosome 20 open reading frame 40
ENST00000370873.9	MANE_select
ENST00000370873.9	proteasome (prosome, macropain) subunit, alpha type, 7, (C6, HSPC, RC6-1, XAPC7, MGC3755)
ENST00000442551.5	proteasome (prosome, macropain) subunit, alpha type, 7, (C6, HSPC, RC6-1, XAPC7, MGC3755)
ENST00000484488.5	proteasome (prosome, macropain) subunit, alpha type, 7, (C6, HSPC, RC6-1, XAPC7, MGC3755)
ENST00000370861.1	proteasome (prosome, macropain) subunit, alpha type, 7, (C6, HSPC, RC6-1, XAPC7, MGC3755)
ENST00000486193.1	proteasome (prosome, macropain) subunit, alpha type, 7, (C6, HSPC, RC6-1, XAPC7, MGC3755)
ENST00000370858.3	proteasome (prosome, macropain) subunit, alpha type, 7, (C6, HSPC, RC6-1, XAPC7, MGC3755)
ENST00000331758.8	MANE_select
ENST00000331758.8	synovial sarcoma translocation gene on chromosome 18-like 1 (KIAA0693)
ENST00000450482.5	synovial sarcoma translocation gene on chromosome 18-like 1
ENST00000450482.5	this variant and either of variant fragments .3.3 and .3.4 could be part of one single variant
ENST00000491916.1	synovial sarcoma translocation gene on chromosome 18-like 1
ENST00000491916.1	this variant and variant fragment .3.2 could be part of one single variant
ENST00000492466.2	synovial sarcoma translocation gene on chromosome 18-like 1
ENST00000492466.2	this variant and variant fragment .3.2 could be part of one single variant
ENST00000370823.8	GTP binding protein 5 (putative) (GTPBP5)(FLJ10741, DKFZP434C0935)
ENST00000370823.8	MANE_select
ENST00000466933.1	GTP binding protein 5 (putative) (GTPBP5)(FLJ10741, DKFZP434C0935)
ENST00000471352.5	GTP binding protein 5 (putative) (GTPBP5)(FLJ10741, DKFZP434C0935)
ENST00000467101.5	GTP binding protein 5 (putative) (GTPBP5)(FLJ10741, DKFZP434C0935)
ENST00000448254.1	GTP binding protein 5 (putative) (GTPBP5)(FLJ10741, DKFZP434C0935)
ENST00000472005.5	GTP binding protein 5 (putative) (GTPBP5)(FLJ10741, DKFZP434C0935)
ENST00000466099.1	GTP binding protein 5 (putative) (GTPBP5)(FLJ10741, DKFZP434C0935)
ENST00000461411.1	GTP binding protein 5 (putative) (GTPBP5)(FLJ10741, DKFZP434C0935)
ENST00000471962.1	GTP binding protein 5 (putative) (GTPBP5)(FLJ10741, DKFZP434C0935)
ENST00000488748.1	GTP binding protein 5 (putative) (GTPBP5)(FLJ10741, DKFZP434C0935)
ENST00000340177.10	MANE_select
ENST00000340177.10	histamine receptor H3
ENST00000615516.1	upstream uORF
ENST00000618509.4	alternative 5' UTR
ENST00000622332.4	alternative 5' UTR
ENST00000642957.1	alternative 5' UTR
ENST00000313733.9	MANE_select
ENST00000643412.1	alternative 5' UTR
ENST00000643981.1	alternative 5' UTR
ENST00000471817.2	KIAA0772
ENST00000471817.2	similar to oxysterol-binding protein
ENST00000491935.5	cell membrane glycoprotein (surface antigen), 110000 M(r) (GP110)
ENST00000253003.7	MANE_select
ENST00000253003.7	genebuild_only_MANE
ENST00000414042.1	putative novel transcript
ENST00000252999.7	KIAA0533
ENST00000252999.7	MANE_select
ENST00000252999.7	laminin alpha 5
ENST00000370677.4	laminin alpha 5
ENST00000456721.2	putative novel transcript
ENST00000343986.9	MANE_select
ENST00000343986.9	ribosomal protein S21
ENST00000492356.2	ribosomal protein S21
ENST00000370562.1	ribosomal protein S21
ENST00000370592.2	ribosomal protein S21
ENST00000453274.1	not organism-supported
ENST00000252998.2	MANE_select
ENST00000252998.2	chromosome 20 open reading frame 151 (FLJ90438) (weakly similar to retinoblastoma binding protein 8 (RBBP8))
ENST00000618678.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000252997.3	GATA binding protein 5
ENST00000252997.3	MANE_select
ENST00000412495.5	novel transcript (FLJ31984)
ENST00000475015.5	novel transcript (FLJ30313)
ENST00000670040.1	Assembled from SLRseq reads (SRP049776)
ENST00000436101.1	novel transcript
ENST00000624914.3	chromosome 20 open reading frame 166
ENST00000370523.1	chromosome 20 open reading frame 166
ENST00000441388.1	ribosomal protein L7 pseudogene 3
ENST00000650706.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000661583.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427132.1	novel transcript
ENST00000418953.1	putative novel transcript
ENST00000370520.3	novel protein (FLJ32154)
ENST00000217159.6	MANE_select
ENST00000217159.6	genebuild_only_MANE
ENST00000497209.5	solute carrier family 21 (organic anion transporter) member 12 (SLC21A12)
ENST00000370507.5	solute carrier family 21 (organic anion transporter) member 12 (SLC21A12)
ENST00000470412.5	solute carrier family 21 (organic anion transporter) member 12 (SLC21A12)
ENST00000495889.5	solute carrier family 21 (organic anion transporter) member 12 (SLC21A12)
ENST00000466961.5	solute carrier family 21 (organic anion transporter) member 12 (SLC21A12)
ENST00000451793.1	solute carrier family 21 (organic anion transporter) member 12 (SLC21A12)
ENST00000497919.5	solute carrier family 21 (organic anion transporter) member 12 (SLC21A12)
ENST00000466818.1	solute carrier family 21 (organic anion transporter) member 12 (SLC21A12)
ENST00000451648.1	novel transcript
ENST00000411824.1	novel transcript
ENST00000433126.1	novel transcript
ENST00000435412.1	originally annotated as C20orf90
ENST00000370501.4	MANE_select
ENST00000370501.4	neurotensin receptor 1 (high affinity)
ENST00000482259.1	neurotensin receptor 1 (high affinity)
ENST00000430184.1	putative novel transcript
ENST00000657741.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667978.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655940.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667589.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658884.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000412500.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658688.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658688.1	putative novel transcript
ENST00000653007.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000370487.5	MANE_select
ENST00000431361.1	novel transcript
ENST00000290291.10	MANE_select
ENST00000290291.10	opioid growth factor receptor (7-60 protein), variant 1 (FLJ12172)
ENST00000370461.5	opioid growth factor receptor (7-60 protein), variant 2 (FLJ00084)
ENST00000450048.1	opioid growth factor receptor (7-60 protein)
ENST00000649368.1	CAGE supported TSS
ENST00000649368.1	LR annotation
ENST00000649368.1	MANE_select
ENST00000335351.8	MANE_select
ENST00000430209.1	ADP-ribosylation factor 4 pseudogene 2
ENST00000395343.6	DKFZp434P1115
ENST00000395343.6	MANE_select
ENST00000395340.5	KIAA0333
ENST00000370371.8	FLJ11265
ENST00000370368.5	alternative 5' UTR
ENST00000354665.8	alternative 5' UTR
ENST00000619319.1	CAGE supported TSS
ENST00000266069.5	MANE_select
ENST00000497101.1	UTR of a novel protein (FLJ20602)
ENST00000370349.7	chromosome 20 open reading frame 59
ENST00000370351.9	MANE_select
ENST00000488738.5	chromosome 20 open reading frame 59 (FLJ00178)
ENST00000411611.1	chromosome 20 open reading frame 59
ENST00000459704.6	chromosome 20 open reading frame 59
ENST00000487303.1	chromosome 20 open reading frame 59
ENST00000483113.1	chromosome 20 open reading frame 59
ENST00000612929.2	MANE_select
ENST00000370341.3	DKFZp434E222
ENST00000370341.3	non canonical polymorphism
ENST00000456634.1	non canonical polymorphism
ENST00000455711.1	novel transcript
ENST00000658410.1	Assembled from SLRseq reads (SRP049776)
ENST00000651861.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000657642.1	Assembled from SLRseq reads (SRP049776)
ENST00000665105.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651299.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000665943.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665538.1	Assembled from SLRseq reads (SRP049776)
ENST00000370339.8	MANE_select
ENST00000217169.8	MANE_select
ENST00000370316.8	MANE_select
ENST00000523114.5	alternative 5' UTR
ENST00000547204.5	upstream ATG
ENST00000549047.5	upstream ATG
ENST00000370283.9	FLJ10767
ENST00000370283.9	MANE_select
ENST00000518601.6	upstream ATG
ENST00000522403.6	alternative 5' UTR
ENST00000550188.1	alternative 5' UTR
ENST00000358894.10	NP_065933
ENST00000422202.5	KIAA1510
ENST00000415763.5	KIAA1510
ENST00000471582.5	DKFZp547J124
ENST00000494913.5	FLJ25836
ENST00000370263.9	MANE_select
ENST00000628665.1	NMD likely if extended
ENST00000475033.5	FLJ43386
ENST00000428531.1	novel transcript
ENST00000359125.7	MANE_select
ENST00000359125.7	potassium voltage-gated channel, KQT-like subfamily, member 2 (EBN, BFNC, EBN1, ENB1)
ENST00000626839.2	potassium voltage-gated channel, KQT-like subfamily, member 2 (EBN, BFNC, EBN1, ENB1)
ENST00000625514.2	confirm experimentally
ENST00000629241.2	confirm experimentally
ENST00000629676.2	confirm experimentally
ENST00000370224.5	confirm experimentally
ENST00000370224.5	potassium voltage-gated channel, KQT-like subfamily, member 2 (EBN, BFNC, EBN1, ENB1)
ENST00000637193.1	CAGE supported TSS
ENST00000344462.8	NAGNAG splice site
ENST00000627221.2	NAGNAG splice site
ENST00000635867.1	fetal_bam
ENST00000637632.1	fetal_bam
ENST00000370221.3	potassium voltage-gated channel, KQT-like subfamily, member 2 (EBN, BFNC, EBN1, ENB1)
ENST00000482957.1	potassium voltage-gated channel, KQT-like subfamily, member 2 (EBN, BFNC, EBN1, ENB1)
ENST00000344425.7	potassium voltage-gated channel, KQT-like subfamily, member 2 (EBN, BFNC, EBN1, ENB1)
ENST00000637133.1	alternative 5' UTR
ENST00000636959.1	cSRR1554554.28404434
ENST00000436263.1	putative novel transcript
ENST00000217182.6	MANE_select
ENST00000217182.6	eukaryotic translation elongation factor 1 alpha 2
ENST00000642899.1	alternative 5' UTR
ENST00000645357.1	alternative 5' UTR
ENST00000646335.1	alternative 5' UTR
ENST00000458368.1	putative novel transcript
ENST00000464438.1	chromosome 20 open reading frame 149
ENST00000370179.8	MANE_select
ENST00000370179.8	chromosome 20 open reading frame 149 (FLJ21046)
ENST00000370177.1	chromosome 20 open reading frame 149
ENST00000473620.1	chromosome 20 open reading frame 149
ENST00000542869.3	MANE_select
ENST00000217188.1	novel tyrosine kinase
ENST00000611891.1	alternative 5' UTR
ENST00000370097.2	MANE_select
ENST00000370097.2	alternative 5' UTR
ENST00000427522.6	peroxisomal proliferator-activated receptor A interacting complex 285 (PRIC285)(FLJ00244, KIAA1769)
ENST00000478861.1	peroxisomal proliferator-activated receptor A interacting complex 285 (PRIC285)(FLJ00244, KIAA1769)
ENST00000479540.5	novel protein (LOC200213)
ENST00000370082.1	novel protein (LOC200213)
ENST00000370069.5	glucocorticoid modulatory element binding protein 2 (DFKZp434F097)
ENST00000266068.5	glucocorticoid modulary element binding protein 2
ENST00000266068.5	glucocorticoid modulatory element binding protein 2
ENST00000370077.2	MANE_select
ENST00000370077.2	alternative 5' UTR
ENST00000370077.2	alternatively spliced in 5' UTR, shares CDS with bK3184A7.1.1
ENST00000370077.2	glucocorticoid modulatory element binding protein 2 (KIAA1269)
ENST00000449500.1	putative novel transcript
ENST00000411579.1	putative novel transcript
ENST00000370053.3	MANE_select
ENST00000370053.3	SCG10-like protein (SCLIP) (ortholog of rabbit neuroplasticin-2 (NPC2))
ENST00000370018.7	non canonical TEC
ENST00000508582.6	non canonical TEC
ENST00000360203.11	CAGE supported TSS
ENST00000360203.11	MANE_select
ENST00000360203.11	non canonical TEC
ENST00000646389.1	alternative 5' UTR
ENST00000488316.1	NMD likely if extended
ENST00000369996.3	MANE_select
ENST00000612256.4	alternative 5' UTR
ENST00000622789.5	MANE_select
ENST00000622789.5	genebuild_only_MANE
ENST00000610414.4	ADP-ribosylation factor related protein 1
ENST00000612772.1	ADP-ribosylation factor related protein 1
ENST00000618838.4	ADP-ribosylation factor related protein 1
ENST00000424545.2	ADP-ribosylation factor related protein 1
ENST00000448100.6	alternative 5' UTR
ENST00000477340.5	FLJ90480
ENST00000355969.11	MANE_select
ENST00000355969.11	alternative 5' UTR
ENST00000431125.1	alternative 5' UTR
ENST00000444951.5	alternative 5' UTR
ENST00000621325.1	novel transcript (FLJ30160)
ENST00000465591.1	novel transcript
ENST00000487026.5	novel transcript
ENST00000309546.8	MANE_select
ENST00000480139.5	novel transcript
ENST00000493265.2	alternative 5' UTR
ENST00000489212.2	novel transcript
ENST00000476183.2	novel transcript
ENST00000494776.1	novel transcript
ENST00000476221.1	NMD likely if extended
ENST00000266077.5	MANE_select
ENST00000245663.9	MANE_select
ENST00000650966.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000460757.1	novel transcript
ENST00000480766.1	novel transcript
ENST00000447343.2	putative novel transcript
ENST00000433905.2	putative novel transcript
ENST00000435912.1	novel transcript
ENST00000623918.1	tissue plasminogen activator protein (fragment)
ENST00000601296.2	CAGE supported TSS
ENST00000369916.5	MANE_select
ENST00000369916.5	chromosome 20 open reading frame 135 (similar to BAT5 (HLA-B associated transcript 5, NG26) proteins)
ENST00000369916.5	possible pseudsogene
ENST00000369927.8	NP_001230821.1
ENST00000346249.9	MANE_select
ENST00000346249.9	NP_003279.2
ENST00000348257.9	NP_955391.1
ENST00000352482.8	NP_955394.1
ENST00000351424.8	NP_955393.1
ENST00000217121.9	NP_955392.1
ENST00000358548.4	NP_955395.1
ENST00000474176.2	tumor protein D52-like 2
ENST00000360864.9	DnaJ (Hsp40) homolog, subfamily C, member 5 (FLJ00118, FLJ00095, FLJ13070)
ENST00000360864.9	MANE_select
ENST00000470551.1	DnaJ (Hsp40) homolog, subfamily C, member 5 (FLJ13070)
ENST00000354216.11	MANE_select
ENST00000354216.11	uridine kinase-like 1 (FLJ20517)
ENST00000369908.9	NP_001180308
ENST00000430743.1	MIR1914.10516771
ENST00000430743.1	uridine kinase-like 1
ENST00000492660.1	uridine kinase-like 1
ENST00000483710.1	uridine kinase-like 1
ENST00000369888.6	MANE_select
ENST00000369888.6	novel protein (KIAA1196)
ENST00000369886.8	MANE_select
ENST00000369886.8	chromosome 20 open reading frame 136
ENST00000498830.5	chromosome 20 open reading frame 136 novel transcript
ENST00000478694.1	chromosome 20 open reading frame 136 novel transcript
ENST00000450107.1	chromosome 20 open reading frame 136
ENST00000266079.5	MANE_select
ENST00000266079.5	TOM (putative mitochondrial outer membrane protein import receptor (similar to yeast pre-mRNA splicing factors Prp1/Zer1 and Prp6)
ENST00000266079.5	putative mitochondrial outer membrane protein import receptor (TOM), similar to yeast pre-mRNA splicing factors Prp1/Zer1 and Prp6
ENST00000431158.1	DKFZp434G015
ENST00000636176.1	CAGE supported TSS
ENST00000636176.1	formerly NCRNA00176 / non-protein coding RNA 176
ENST00000340356.9	MANE_select
ENST00000475792.1	transcription elongation factor A (SII), 2 (TFIIS)
ENST00000361317.6	5'UTR
ENST00000361317.6	alternative 5' UTR
ENST00000361317.6	transcription elongation factor A (SII), 2 (TFIIS)
ENST00000487164.5	transcription elongation factor A (SII), 2 (TFIIS)
ENST00000476113.1	transcription elongation factor A (SII), 2 (TFIIS)
ENST00000343484.10	MANE_select
ENST00000343484.10	transcription elongation factor A (SII), 2 (TFIIS)
ENST00000339217.8	alternative 5' UTR
ENST00000339217.8	transcription elongation factor A (SII), 2 (TFIIS)
ENST00000415602.5	alternative 5' UTR
ENST00000415602.5	transcription elongation factor A (SII), 2 (TFIIS)
ENST00000440819.5	alternative 5' UTR
ENST00000440819.5	transcription elongation factor A (SII), 2 (TFIIS)
ENST00000470559.5	transcription elongation factor A (SII), 2 (TFIIS)
ENST00000465111.5	transcription elongation factor A (SII), 2 (TFIIS)
ENST00000458442.1	alternative 5' UTR
ENST00000458442.1	transcription elongation factor A (SII), 2 (TFIIS)
ENST00000465433.5	transcription elongation factor A (SII), 2 (TFIIS)
ENST00000477783.5	transcription elongation factor A (SII), 2 (TFIIS)
ENST00000495168.1	transcription elongation factor A (SII), 2 (TFIIS)
ENST00000461072.5	Transcription elongation factor A (SII), 2 (TCEA2), transcript variant 6
ENST00000461072.5	alternative 3' UTR
ENST00000475236.1	transcription elongation factor A (SII), 2 (TFIIS)
ENST00000455524.1	putative novel transcript
ENST00000395042.2	MANE_select
ENST00000395042.2	genebuild_only_MANE
ENST00000493165.1	alternative 5' UTR
ENST00000493165.1	regulator of G-protein signalling 19 (GAIP,RGSGAIP)
ENST00000479996.1	regulator of G-protein signalling 19 (GAIP,RGSGAIP)
ENST00000336866.7	MANE_select
ENST00000336866.7	alternative 5' UTR
ENST00000336866.7	opiate receptor-like protein 1 (ORL1, NOCIR, KOR-3D)
ENST00000355631.8	alternative 5' UTR
ENST00000355631.8	opiate receptor-like protein 1 (ORL1, NOCIR, KOR-3D)
ENST00000349451.3	alternative 5' UTR
ENST00000349451.3	opiate receptor-like protein 1 (ORL1, NOCIR, KOR-3D)
ENST00000660961.1	Assembled from SLRseq reads (SRP049776)
ENST00000644172.2	CAGE supported TSS
ENST00000328439.6	MANE_select
ENST00000650655.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000369768.1	G protein-coupled receptor 8
ENST00000308824.11	MANE_select
ENST00000610196.1	alternative 5' UTR
ENST00000609764.1	alternative 5' UTR
ENST00000610074.1	alternative 5' UTR
ENST00000447359.1	capicua homolog (Drosophila) (CIC) pseudogene
ENST00000425473.1	novel transcript
ENST00000651312.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000669409.1	Assembled from SLRseq reads (SRP049776)
ENST00000622028.1	IGHV1/OR21-1*01
ENST00000622028.1	ORF
ENST00000496773.1	myeloid/lymphoid or mixed-lineage leukemia 3 (MLL3) pseudogene
ENST00000619242.1	GENCODE experimental pipeline
ENST00000667012.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000613970.1	GENCODE experimental pipeline
ENST00000457565.1	GENCODE experimental pipeline
ENST00000594133.3	not best-in-genome evidence
ENST00000447861.5	chromosome 21 open reading frame 99 novel transcript
ENST00000471407.1	chromosome 21 open reading frame 99 novel transcript
ENST00000624445.2	not best-in-genome evidence
ENST00000660298.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671654.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664515.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000427446.1	GENCODE experimental pipeline
ENST00000444901.1	GENCODE experimental pipeline
ENST00000398098.2	GENCODE experimental pipeline
ENST00000431297.1	GENCODE experimental pipeline
ENST00000444356.1	GENCODE experimental pipeline
ENST00000311003.6	GENCODE experimental pipeline
ENST00000443486.1	GENCODE experimental pipeline
ENST00000433312.1	GENCODE experimental pipeline
ENST00000400583.2	GENCODE experimental pipeline
ENST00000428301.1	chromosome 21 open reading frame 15 novel transcript
ENST00000436765.1	novel transcript
ENST00000428576.5	chromosome 21 open reading frame 81 novel transcript
ENST00000432875.5	chromosome 21 open reading frame 81 novel transcript
ENST00000429521.5	chromosome 21 open reading frame 81 novel transcript
ENST00000344693.5	chromosome 21 open reading frame 81 novel transcript
ENST00000448463.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000432621.5	GENCODE experimental pipeline
ENST00000653756.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000681601.1	CAGE supported TSS
ENST00000681601.1	MANE_select
ENST00000468643.5	FLJ34012
ENST00000400577.4	MANE_select
ENST00000429114.5	GENCODE experimental pipeline
ENST00000482980.5	non canonical polymorphism
ENST00000285667.4	MANE_select
ENST00000400566.6	CAGE supported TSS
ENST00000400566.6	FLJ43154
ENST00000400566.6	MANE_select
ENST00000400564.5	CAGE supported TSS
ENST00000647101.1	; Jon Mudge: 08/06/2017
ENST00000647101.1	CAGE supported TSS
ENST00000400562.1	GENCODE experimental pipeline
ENST00000449214.1	GENCODE experimental pipeline
ENST00000660772.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660333.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665066.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670675.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000454128.3	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654377.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000455253.6	GENCODE experimental pipeline
ENST00000658213.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655631.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661285.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000435315.2	GENCODE experimental pipeline
ENST00000453699.1	GENCODE experimental pipeline
ENST00000448152.2	GENCODE experimental pipeline
ENST00000454795.1	GENCODE experimental pipeline
ENST00000430391.1	GENCODE experimental pipeline
ENST00000400202.5	alternative 5' UTR
ENST00000318948.7	MANE_select
ENST00000318948.7	genebuild_only_MANE
ENST00000411932.1	alternative 5' UTR
ENST00000446301.1	GENCODE experimental pipeline
ENST00000436429.1	GENCODE experimental pipeline
ENST00000449746.1	GENCODE experimental pipeline
ENST00000664748.1	Assembled from SLRseq reads (SRP049776)
ENST00000664748.1	GENCODE experimental pipeline
ENST00000658863.1	Assembled from SLRseq reads (SRP049776)
ENST00000666351.1	Assembled from SLRseq reads (SRP049776)
ENST00000656127.1	Assembled from SLRseq reads (SRP049776)
ENST00000449602.2	Assembled from SLRseq reads (SRP049776)
ENST00000654045.1	Assembled from SLRseq reads (SRP049776)
ENST00000662630.1	Assembled from SLRseq reads (SRP049776)
ENST00000670882.1	Assembled from SLRseq reads (SRP049776)
ENST00000653886.1	Assembled from SLRseq reads (SRP049776)
ENST00000658320.1	Assembled from SLRseq reads (SRP049776)
ENST00000659443.1	Assembled from SLRseq reads (SRP049776)
ENST00000635525.2	Assembled from SLRseq reads (SRP049776)
ENST00000669763.1	Assembled from SLRseq reads (SRP049776)
ENST00000657904.1	Assembled from SLRseq reads (SRP049776)
ENST00000660967.1	Assembled from SLRseq reads (SRP049776)
ENST00000655203.1	Assembled from SLRseq reads (SRP049776)
ENST00000450823.1	GENCODE experimental pipeline
ENST00000433588.1	GENCODE experimental pipeline
ENST00000454157.1	GENCODE experimental pipeline
ENST00000285679.10	FLJ12385
ENST00000478932.1	FLJ36764
ENST00000433427.1	GENCODE experimental pipeline
ENST00000653129.1	Assembled from SLRseq reads (SRP049776)
ENST00000658708.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666465.1	Assembled from SLRseq reads (SRP049776)
ENST00000664579.1	Assembled from SLRseq reads (SRP049776)
ENST00000667533.1	Assembled from SLRseq reads (SRP049776)
ENST00000653624.1	Assembled from SLRseq reads (SRP049776)
ENST00000667199.1	Assembled from SLRseq reads (SRP049776)
ENST00000654360.1	Assembled from SLRseq reads (SRP049776)
ENST00000667485.1	Assembled from SLRseq reads (SRP049776)
ENST00000657177.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670888.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663661.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663776.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653809.1	Assembled from SLRseq reads (SRP049776)
ENST00000653669.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000602935.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000602580.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656690.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666517.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655524.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658518.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667152.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000619222.4	novel transcript FLJ38295
ENST00000667869.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658644.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663510.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660908.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669537.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658075.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660532.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661987.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656642.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656642.1	novel transcript
ENST00000667804.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654560.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670003.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000400178.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671280.1	Assembled from SLRseq reads (SRP049776)
ENST00000456342.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657408.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670446.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663095.1	Assembled from SLRseq reads (SRP049776)
ENST00000661148.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671666.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666636.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666794.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656817.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667703.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668571.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670045.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655848.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663968.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669276.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658724.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654997.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657710.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655197.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657060.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670980.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000445461.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662969.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419952.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657745.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666994.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671437.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666701.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654176.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665555.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413645.2	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000602505.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656619.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670538.1	Assembled from SLRseq reads (SRP049776)
ENST00000665243.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655866.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660455.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652811.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665282.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000428669.7	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661403.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661771.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662622.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658514.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661418.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668889.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000671058.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000602901.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666860.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670108.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664445.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664445.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000656031.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658389.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663412.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667011.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665779.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662279.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659105.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664319.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660213.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669307.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657977.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660287.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664910.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663516.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662647.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671218.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665230.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665230.1	GENCODE experimental pipeline
ENST00000665189.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667313.1	Assembled from RACEseq reads
ENST00000667374.1	Assembled from SLRseq reads (SRP049776)
ENST00000658826.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659192.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664030.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652938.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664485.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663933.1	Assembled from SLRseq reads (SRP049776)
ENST00000670290.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668830.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667401.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000602620.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659209.1	Assembled from SLRseq reads (SRP049776)
ENST00000657520.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654245.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665504.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665504.1	Assembled from SLRseq reads (SRP049776)
ENST00000659483.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661939.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666305.1	Assembled from SLRseq reads (SRP049776)
ENST00000653518.1	Assembled from SLRseq reads (SRP049776)
ENST00000666704.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666704.1	Assembled from SLRseq reads (SRP049776)
ENST00000660609.1	Assembled from SLRseq reads (SRP049776)
ENST00000655790.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660035.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657239.1	Assembled from SLRseq reads (SRP049776)
ENST00000667777.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669034.1	Assembled from SLRseq reads (SRP049776)
ENST00000660794.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660794.1	Assembled from SLRseq reads (SRP049776)
ENST00000399358.2	GENCODE experimental pipeline
ENST00000418544.1	GENCODE experimental pipeline
ENST00000652633.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000602921.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661484.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000624971.1	confirm experimentally
ENST00000444868.2	GENCODE experimental pipeline
ENST00000430064.1	GENCODE experimental pipeline
ENST00000433383.1	GENCODE experimental pipeline
ENST00000440664.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000440664.6	Assembled from SLRseq reads (SRP049776)
ENST00000445481.1	GENCODE experimental pipeline
ENST00000284878.12	MANE_select
ENST00000413813.1	GENCODE experimental pipeline
ENST00000348354.7	MANE_select
ENST00000457956.1	alternative 5' UTR
ENST00000416641.1	GENCODE experimental pipeline
ENST00000430815.5	GENCODE experimental pipeline
ENST00000284881.9	FLJ13763
ENST00000284881.9	MANE_select
ENST00000493464.1	novel transcript
ENST00000482915.1	novel transcript
ENST00000428689.5	GENCODE experimental pipeline
ENST00000447175.1	novel transcript
ENST00000456825.1	GENCODE experimental pipeline
ENST00000400128.5	FLJ12627
ENST00000299295.7	MANE_select
ENST00000432412.1	GENCODE experimental pipeline
ENST00000284885.8	MANE_select
ENST00000455391.1	GENCODE experimental pipeline
ENST00000437492.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671206.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671206.1	GENCODE experimental pipeline
ENST00000653218.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656413.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000416002.1	GENCODE experimental pipeline
ENST00000358455.4	GENCODE experimental pipeline
ENST00000440372.1	GENCODE experimental pipeline
ENST00000449840.1	GENCODE experimental pipeline
ENST00000450653.2	GENCODE experimental pipeline
ENST00000424219.1	GENCODE experimental pipeline
ENST00000413933.1	GENCODE experimental pipeline
ENST00000433210.1	GENCODE experimental pipeline
ENST00000448908.1	GENCODE experimental pipeline
ENST00000282964.5	GENCODE experimental pipeline
ENST00000400117.2	GENCODE experimental pipeline
ENST00000652251.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000443479.1	GENCODE experimental pipeline
ENST00000436373.1	GENCODE experimental pipeline
ENST00000425091.1	GENCODE experimental pipeline
ENST00000447938.1	GENCODE experimental pipeline
ENST00000413190.1	GENCODE experimental pipeline
ENST00000655781.1	Assembled from SLRseq reads (SRP049776)
ENST00000669643.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000658406.1	Assembled from SLRseq reads (SRP049776)
ENST00000663293.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663293.1	Assembled from SLRseq reads (SRP049776)
ENST00000670578.1	Assembled from SLRseq reads (SRP049776)
ENST00000670894.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670894.1	Assembled from SLRseq reads (SRP049776)
ENST00000659277.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659277.1	Assembled from SLRseq reads (SRP049776)
ENST00000664349.1	Assembled from SLRseq reads (SRP049776)
ENST00000665709.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664379.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666222.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661917.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661917.1	Assembled from SLRseq reads (SRP049776)
ENST00000665548.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665548.1	Assembled from SLRseq reads (SRP049776)
ENST00000652807.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652807.1	Assembled from SLRseq reads (SRP049776)
ENST00000665378.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665378.1	Assembled from SLRseq reads (SRP049776)
ENST00000671000.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671000.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000671000.1	Assembled from SLRseq reads (SRP049776)
ENST00000655997.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655997.1	Assembled from SLRseq reads (SRP049776)
ENST00000665470.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665470.1	Assembled from SLRseq reads (SRP049776)
ENST00000654618.1	Assembled from SLRseq reads (SRP049776)
ENST00000659193.1	Assembled from SLRseq reads (SRP049776)
ENST00000658569.1	Assembled from SLRseq reads (SRP049776)
ENST00000669863.1	Assembled from SLRseq reads (SRP049776)
ENST00000665918.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665918.1	Assembled from SLRseq reads (SRP049776)
ENST00000671660.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670750.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670750.1	Assembled from SLRseq reads (SRP049776)
ENST00000658703.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658703.1	Assembled from SLRseq reads (SRP049776)
ENST00000655551.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655551.1	Assembled from SLRseq reads (SRP049776)
ENST00000656151.1	Assembled from SLRseq reads (SRP049776)
ENST00000658250.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658250.1	Assembled from SLRseq reads (SRP049776)
ENST00000416768.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000416768.6	FLJ37539
ENST00000668142.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655298.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667667.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655949.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000437238.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665727.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655010.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419299.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665419.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669117.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669337.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667018.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667018.1	Assembled from SLRseq reads (SRP049776)
ENST00000665849.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655525.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655525.1	Assembled from SLRseq reads (SRP049776)
ENST00000659998.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670351.1	Assembled from SLRseq reads (SRP049776)
ENST00000665333.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665333.1	Assembled from SLRseq reads (SRP049776)
ENST00000653294.1	Assembled from SLRseq reads (SRP049776)
ENST00000658084.1	Assembled from SLRseq reads (SRP049776)
ENST00000666757.1	Assembled from SLRseq reads (SRP049776)
ENST00000661350.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661350.1	Assembled from SLRseq reads (SRP049776)
ENST00000663052.1	Assembled from SLRseq reads (SRP049776)
ENST00000667679.1	Assembled from SLRseq reads (SRP049776)
ENST00000654018.1	Assembled from SLRseq reads (SRP049776)
ENST00000653863.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666206.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452561.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665477.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656404.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435279.6	DKFZp686B23275
ENST00000659386.1	Assembled from SLRseq reads (SRP049776)
ENST00000666608.1	Assembled from SLRseq reads (SRP049776)
ENST00000666665.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658509.1	Assembled from SLRseq reads (SRP049776)
ENST00000663053.1	Assembled from SLRseq reads (SRP049776)
ENST00000660140.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663537.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669197.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660599.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655207.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659911.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656294.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659325.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659325.1	Assembled from SLRseq reads (SRP049776)
ENST00000670141.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654371.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654836.1	Assembled from SLRseq reads (SRP049776)
ENST00000660247.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448832.1	GENCODE experimental pipeline
ENST00000400546.6	MANE_select
ENST00000425058.1	GENCODE experimental pipeline
ENST00000428205.1	GENCODE experimental pipeline
ENST00000416182.1	GENCODE experimental pipeline
ENST00000419069.1	novel transcript
ENST00000425979.5	GENCODE experimental pipeline
ENST00000452500.1	GENCODE experimental pipeline
ENST00000667392.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000420255.1	GENCODE experimental pipeline
ENST00000669715.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656955.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667604.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666229.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657104.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419431.2	novel transcript
ENST00000454567.1	GENCODE experimental pipeline
ENST00000654607.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667099.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000444130.1	GENCODE experimental pipeline
ENST00000379571.3	GENCODE experimental pipeline
ENST00000441759.1	GENCODE experimental pipeline
ENST00000438328.1	GENCODE experimental pipeline
ENST00000421604.1	GENCODE experimental pipeline
ENST00000445341.1	GENCODE experimental pipeline
ENST00000652402.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000655729.1	Assembled from SLRseq reads (SRP049776)
ENST00000262354.5	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000262354.5	GENCODE experimental pipeline
ENST00000664912.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661065.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656174.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665559.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653972.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654898.1	Assembled from SLRseq reads (SRP049776)
ENST00000447052.1	GENCODE experimental pipeline
ENST00000425085.1	GENCODE experimental pipeline
ENST00000433101.1	GENCODE experimental pipeline
ENST00000662613.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661152.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000441465.1	GENCODE experimental pipeline
ENST00000447405.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000447405.2	GENCODE experimental pipeline
ENST00000668921.1	Assembled from SLRseq reads (SRP049776)
ENST00000434859.1	GENCODE experimental pipeline
ENST00000661367.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654547.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448063.1	GENCODE experimental pipeline
ENST00000416218.1	GENCODE experimental pipeline
ENST00000656088.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653855.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657522.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659824.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656122.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656842.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653413.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000423581.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671574.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000453784.2	FLJ42200
ENST00000666492.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668315.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655294.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653166.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655533.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654158.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000663985.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655241.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657079.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655505.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654771.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670142.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000415182.1	DKFZp686M0457
ENST00000656780.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668910.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662917.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657774.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655039.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000441009.1	GENCODE experimental pipeline
ENST00000659370.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446404.1	GENCODE experimental pipeline
ENST00000444178.1	GENCODE experimental pipeline
ENST00000424017.1	GENCODE experimental pipeline
ENST00000453802.5	GENCODE experimental pipeline
ENST00000418942.1	non canonical TEC
ENST00000426609.1	GENCODE experimental pipeline
ENST00000409758.1	GENCODE experimental pipeline
ENST00000667825.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656005.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425147.1	GENCODE experimental pipeline
ENST00000653079.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664370.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659435.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668944.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439840.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000662610.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662734.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000441013.5	novel transcript
ENST00000332587.8	novel transcript
ENST00000662287.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671034.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670098.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669436.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665829.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667265.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662827.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659593.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665160.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652840.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659748.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657301.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668015.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440205.5	novel transcript
ENST00000655536.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658909.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419694.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665316.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665316.1	GENCODE experimental pipeline
ENST00000659862.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000352957.9	FLJ20451
ENST00000352957.9	MANE_select
ENST00000480456.6	MANE_select
ENST00000659278.1	Assembled from RACEseq reads
ENST00000450769.1	GENCODE experimental pipeline
ENST00000400094.5	alternative 5' UTR
ENST00000457143.6	NP_001003701
ENST00000457143.6	alternative 5' UTR
ENST00000400090.7	alternative 5' UTR
ENST00000400087.7	alternative 5' UTR
ENST00000400093.3	alternative 5' UTR
ENST00000284971.8	DKFZp566A221
ENST00000284971.8	MANE_select
ENST00000354828.7	DKFZp686G2131
ENST00000354828.7	alternative 5' UTR
ENST00000400075.4	MANE_select
ENST00000436405.1	GENCODE experimental pipeline
ENST00000346798.8	MANE_select
ENST00000456904.3	GENCODE experimental pipeline
ENST00000667606.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000609365.2	Assembled from SLRseq reads (SRP049776)
ENST00000664668.1	Assembled from SLRseq reads (SRP049776)
ENST00000660906.1	Assembled from SLRseq reads (SRP049776)
ENST00000435878.1	GENCODE experimental pipeline
ENST00000429340.1	GENCODE experimental pipeline
ENST00000444306.1	not organism-supported
ENST00000357401.3	FLJ43348
ENST00000299340.9	FLJ30019, DKFZp667C226
ENST00000652641.2	MANE_select
ENST00000652641.2	NAGNAG splice site
ENST00000284984.8	DKFZp686E01144, KIAA1346, DKFZp762C1110
ENST00000284984.8	MANE_select
ENST00000517777.6	align_id:3668814|asmbl_158979
ENST00000678221.1	align_id:3668816|asmbl_158981
ENST00000676955.1	align_id:3668823|asmbl_158988
ENST00000677958.1	long_read_pipeline_2
ENST00000464589.1	FLJ13733
ENST00000451462.6	PLAR_transcripts
ENST00000679152.1	PLAR_transcripts
ENST00000679316.1	align_id:3668829|asmbl_158994
ENST00000426771.1	GENCODE experimental pipeline
ENST00000284987.6	MANE_select
ENST00000652031.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000429271.1	GENCODE experimental pipeline
ENST00000420186.2	GENCODE experimental pipeline
ENST00000656258.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666822.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000447384.1	GENCODE experimental pipeline
ENST00000420241.1	GENCODE experimental pipeline
ENST00000447844.1	GENCODE experimental pipeline
ENST00000426418.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426418.2	GENCODE experimental pipeline
ENST00000657236.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668267.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662686.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660773.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000411460.5	novel transcript
ENST00000425376.5	novel transcript
ENST00000442550.1	novel transcript
ENST00000433344.1	GENCODE experimental pipeline
ENST00000324988.3	novel transcript
ENST00000426534.2	FLJ35800
ENST00000657256.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000609782.1	nested 454 RNA-Seq supported
ENST00000453420.5	GENCODE experimental pipeline
ENST00000662491.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657148.1	Assembled from SLRseq reads (SRP049776)
ENST00000659279.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000433310.6	GENCODE experimental pipeline
ENST00000654020.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000412526.5	novel transcript
ENST00000455939.1	novel transcript
ENST00000303775.10	MANE_select
ENST00000400014.2	GENCODE experimental pipeline
ENST00000361371.10	CAGE supported TSS
ENST00000361371.10	MANE_select
ENST00000389194.7	NP_056380.2
ENST00000389194.7	non canonical conserved
ENST00000389194.7	upstream ATG
ENST00000389195.7	non canonical conserved
ENST00000389195.7	upstream ATG
ENST00000483326.1	FLJ13437
ENST00000320371.6	GENCODE experimental pipeline
ENST00000493196.2	FLJ20049
ENST00000493196.2	MANE_select
ENST00000608809.1	CAGE supported TSS
ENST00000399975.7	FLJ21451
ENST00000334352.8	alternative 5' UTR
ENST00000334352.8	alternatively spliced in 5' UTR, shares CDS with AF129075.4-002
ENST00000399976.7	FLJ22336
ENST00000399976.7	MANE_select
ENST00000485067.1	FLJ33457
ENST00000432178.5	alternative 3' UTR
ENST00000286788.9	MANE_select
ENST00000457162.2	GENCODE experimental pipeline
ENST00000651960.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000339024.8	FLJ16330
ENST00000460883.5	novel transcript
ENST00000399928.6	FLJ31779, DKFZp565A247
ENST00000399928.6	MANE_select
ENST00000399925.5	AF129075.6-003
ENST00000470800.1	novel transcript
ENST00000430001.1	GENCODE experimental pipeline
ENST00000447125.5	novel transcript
ENST00000420364.1	novel transcript
ENST00000431661.1	novel transcript
ENST00000286800.8	MANE_select
ENST00000399921.5	alternative 5' UTR
ENST00000399921.5	alternatively spliced in 5' UTR; shares CDS with AF124731.5-001
ENST00000451655.5	alternative 5' UTR
ENST00000447177.5	alternative 5' UTR
ENST00000435072.1	alternative 5' UTR
ENST00000450472.1	GENCODE experimental pipeline
ENST00000449923.1	GENCODE experimental pipeline
ENST00000608072.1	nested 454 RNA-Seq supported
ENST00000455392.6	novel transcript
ENST00000309331.8	novel transcript
ENST00000423221.5	novel transcript
ENST00000658262.1	Assembled from SLRseq reads (SRP049776)
ENST00000658460.1	Assembled from SLRseq reads (SRP049776)
ENST00000412579.5	novel transcript
ENST00000413131.1	novel transcript
ENST00000565564.1	non canonical polymorphism
ENST00000286808.5	MANE_select
ENST00000451410.1	GENCODE experimental pipeline
ENST00000399899.2	MANE_select
ENST00000430538.1	GENCODE experimental pipeline
ENST00000340345.6	MANE_select
ENST00000416044.1	GENCODE experimental pipeline
ENST00000416044.1	MANE_select
ENST00000360542.5	MANE_select
ENST00000382835.2	GENCODE experimental pipeline
ENST00000382835.2	MANE_select
ENST00000334160.6	MANE_select
ENST00000508999.1	KRTAP13B
ENST00000399889.4	MANE_select
ENST00000355459.4	MANE_select
ENST00000418755.1	KRTAP13A
ENST00000390689.3	MANE_select
ENST00000334055.5	MANE_select
ENST00000334063.6	MANE_select
ENST00000334058.3	MANE_select
ENST00000334151.3	MANE_select
ENST00000421795.1	KRTAP19A
ENST00000445258.1	KRTAP19B
ENST00000439851.1	KRTAP19C
ENST00000334046.5	MANE_select
ENST00000382830.2	GENCODE experimental pipeline
ENST00000382830.2	MANE_select
ENST00000391624.1	MANE_select
ENST00000334680.3	MANE_select
ENST00000334664.3	MANE_select
ENST00000382828.2	GENCODE experimental pipeline
ENST00000382828.2	MANE_select
ENST00000330798.3	MANE_select
ENST00000382826.2	KRTAP19D
ENST00000382826.2	MANE_select
ENST00000444335.1	GENCODE experimental pipeline
ENST00000444335.1	MANE_select
ENST00000333892.3	MANE_select
ENST00000335093.5	MANE_select
ENST00000329621.6	MANE_select
ENST00000621162.1	MANE_select
ENST00000332378.6	MANE_select
ENST00000382822.2	GENCODE experimental pipeline
ENST00000382822.2	MANE_select
ENST00000429033.1	GENCODE experimental pipeline
ENST00000469412.5	FLJ36302
ENST00000455508.1	alternative 5' UTR
ENST00000653041.1	Assembled from SLRseq reads (SRP049776)
ENST00000490865.1	GENCODE experimental pipeline
ENST00000433071.2	CAGE supported TSS
ENST00000449339.1	GENCODE experimental pipeline
ENST00000270142.11	MANE_select
ENST00000286835.12	MANE_select
ENST00000445197.1	GENCODE experimental pipeline
ENST00000458495.1	GENCODE experimental pipeline
ENST00000270112.7	MANE_select
ENST00000437109.1	GENCODE experimental pipeline
ENST00000411605.5	novel transcript
ENST00000414877.1	novel transcript
ENST00000658887.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000290130.4	FLJ90800
ENST00000290130.4	MANE_select
ENST00000453549.1	GENCODE experimental pipeline
ENST00000453549.1	non canonical other
ENST00000453549.1	non-canonical splicing between exons 2 and 3
ENST00000303645.10	MANE_select
ENST00000450936.1	GENCODE experimental pipeline
ENST00000382751.4	KIAA0539
ENST00000382751.4	MANE_select
ENST00000534991.3	GENCODE experimental pipeline
ENST00000673740.1	alternative 3' UTR
ENST00000674072.1	alternative 3' UTR
ENST00000673633.1	alternative 3' UTR
ENST00000673984.1	alternative 3' UTR
ENST00000674042.1	alternative 3' UTR
ENST00000674025.1	alternative 3' UTR
ENST00000673879.1	alternative 3' UTR
ENST00000673900.1	alternative 3' UTR
ENST00000673727.1	alternative 3' UTR
ENST00000673807.1	NP_001337267.1
ENST00000469079.5	novel transcript
ENST00000459833.5	novel transcript
ENST00000435323.5	novel transcript
ENST00000437338.5	novel transcript
ENST00000457807.5	novel transcript
ENST00000401402.7	GENCODE experimental pipeline
ENST00000300255.7	MANE_select
ENST00000481638.1	novel transcript
ENST00000464037.5	novel transcript FLJ43023
ENST00000496615.5	novel transcript
ENST00000485488.1	novel transcript
ENST00000448649.1	GENCODE experimental pipeline
ENST00000674141.1	alternative 3' UTR
ENST00000300258.8	FLJ25349
ENST00000300258.8	MANE_select
ENST00000674156.1	alternative 5' UTR
ENST00000582575.2	alternative 5' UTR
ENST00000431599.1	novel transcript
ENST00000290155.8	FLJ25711
ENST00000290155.8	MANE_select
ENST00000382549.8	FLJ30766
ENST00000382549.8	Non-canonical splicing between exons 1 and 2
ENST00000425336.1	novel transcript
ENST00000300260.7	novel transcript FLJ20467
ENST00000483315.1	novel transcript FLJ37137
ENST00000411943.1	GENCODE experimental pipeline
ENST00000630077.3	NP_001153778.1
ENST00000674204.1	CAGE supported TSS
ENST00000674351.1	CAGE supported TSS
ENST00000674351.1	MANE_select
ENST00000674351.1	upstream ATG
ENST00000674308.1	CAGE supported TSS
ENST00000674308.1	upstream ATG
ENST00000655379.1	Assembled from SLRseq reads (SRP049776)
ENST00000654247.1	Assembled from SLRseq reads (SRP049776)
ENST00000655758.1	Assembled from SLRseq reads (SRP049776)
ENST00000665120.1	Assembled from SLRseq reads (SRP049776)
ENST00000662524.1	Assembled from SLRseq reads (SRP049776)
ENST00000665654.1	Assembled from SLRseq reads (SRP049776)
ENST00000458479.1	FLJ31822
ENST00000440052.5	GENCODE experimental pipeline
ENST00000660366.1	Assembled from SLRseq reads (SRP049776)
ENST00000653345.1	Assembled from SLRseq reads (SRP049776)
ENST00000653730.1	Assembled from SLRseq reads (SRP049776)
ENST00000655910.1	Assembled from SLRseq reads (SRP049776)
ENST00000665598.1	Assembled from SLRseq reads (SRP049776)
ENST00000331923.9	MANE_select
ENST00000466846.5	novel transcript FLJ46670
ENST00000497873.1	novel transcript FLJ35972
ENST00000445049.1	GENCODE experimental pipeline
ENST00000445049.1	novel transcript
ENST00000421049.1	novel transcript
ENST00000464256.1	novel transcript
ENST00000382375.8	FLJ39282
ENST00000382377.3	novel transcript
ENST00000655231.1	Assembled from SLRseq reads (SRP049776)
ENST00000612326.5	Assembled from SLRseq reads (SRP049776)
ENST00000382378.6	Assembled from SLRseq reads (SRP049776)
ENST00000661254.1	Assembled from SLRseq reads (SRP049776)
ENST00000666106.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650763.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000669746.1	Assembled from SLRseq reads (SRP049776)
ENST00000663888.1	Assembled from SLRseq reads (SRP049776)
ENST00000624800.1	GENCODE experimental pipeline
ENST00000479548.2	MANE_select
ENST00000479548.2	alternative 5' UTR
ENST00000487113.1	alternative 5' UTR
ENST00000444036.1	GENCODE experimental pipeline
ENST00000427911.1	GENCODE experimental pipeline
ENST00000382357.4	MANE_select
ENST00000333337.3	FLJ34143
ENST00000453716.1	GENCODE experimental pipeline
ENST00000382348.2	DKFZp547G055
ENST00000382348.2	MANE_select
ENST00000657804.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670527.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000421051.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000421051.2	GENCODE experimental pipeline
ENST00000655501.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669414.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000450830.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000450830.2	GENCODE experimental pipeline
ENST00000451980.4	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000342136.9	MANE_select
ENST00000420068.1	NMD likely if extended
ENST00000447980.1	alternative 5' UTR
ENST00000411998.1	FLJ41728
ENST00000411998.1	GENCODE experimental pipeline
ENST00000290200.7	MANE_select
ENST00000493295.5	FLJ42063
ENST00000270139.8	MANE_select
ENST00000652513.1	180076
ENST00000451645.1	GENCODE experimental pipeline
ENST00000290219.11	MANE_select
ENST00000420455.5	DKFZp686C2482
ENST00000542230.7	MANE_select
ENST00000441128.5	GENCODE experimental pipeline
ENST00000414617.1	GENCODE experimental pipeline
ENST00000450928.1	GENCODE experimental pipeline
ENST00000381947.4	MANE_select
ENST00000402202.1	not organism-supported
ENST00000381831.7	DKFZp686F0640
ENST00000381839.7	alternative 5' UTR
ENST00000381815.9	MANE_select
ENST00000381815.9	alternative 5' UTR
ENST00000430874.5	alternative 5' UTR
ENST00000426819.5	alternative 5' UTR
ENST00000438059.5	alternative 5' UTR
ENST00000441403.1	alternative 5' UTR
ENST00000448054.1	GENCODE experimental pipeline
ENST00000356577.10	MANE_select
ENST00000381692.6	FLJ46057
ENST00000300278.8	KIAA1019
ENST00000439593.1	GENCODE experimental pipeline
ENST00000303113.10	alternative 3' UTR
ENST00000453626.5	GENCODE experimental pipeline
ENST00000303071.10	FLJ90483
ENST00000303071.10	MANE_select
ENST00000381554.8	MANE_select
ENST00000381554.8	non canonical U12
ENST00000381540.7	FLJ10431
ENST00000381540.7	non canonical TEC
ENST00000381540.7	non-canonical splicing between exons 11 and 12
ENST00000452420.5	FLJ25342
ENST00000445393.5	GENCODE experimental pipeline
ENST00000361534.6	DKFZp779H2066
ENST00000429827.5	DKFZp686B0193
ENST00000420072.5	FLJ33042
ENST00000420072.5	GENCODE experimental pipeline
ENST00000381318.8	FLJ38485, FLJ90809, FLJ31542, FLJ90073
ENST00000381318.8	MANE_select
ENST00000491703.5	FLJ42193
ENST00000290299.7	MANE_select
ENST00000652380.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000610236.1	nested 454 RNA-Seq supported
ENST00000427447.5	GENCODE experimental pipeline
ENST00000608431.1	nested 454 RNA-Seq supported
ENST00000381181.1	FLJ46020
ENST00000381181.1	GENCODE experimental pipeline
ENST00000609132.1	nested 454 RNA-Seq supported
ENST00000399312.3	MANE_select
ENST00000482679.1	FLJ39055
ENST00000381151.5	MANE_select
ENST00000362077.4	GENCODE experimental pipeline
ENST00000362077.4	exons 1, 2 and 6 found using dotter
ENST00000415238.1	GENCODE experimental pipeline
ENST00000609062.1	nested 454 RNA-Seq supported
ENST00000609947.1	454 RNA-Seq supported
ENST00000652428.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652428.2	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000440403.2	Assembled from SLRseq reads (SRP049776)
ENST00000440403.2	GENCODE experimental pipeline
ENST00000290310.4	MANE_select
ENST00000481710.5	novel transcript FLJ35374
ENST00000399292.8	MANE_select
ENST00000489469.5	novel transcript
ENST00000495363.5	novel transcript
ENST00000474455.1	alternative 3' UTR
ENST00000474455.1	alternative 5' UTR
ENST00000474455.1	novel transcript
ENST00000399295.2	FLJ25151
ENST00000652570.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000622934.3	NMD exception
ENST00000622934.3	alternative 3' UTR
ENST00000624758.3	alternative 3' UTR
ENST00000624758.3	alternative 5' UTR
ENST00000623661.1	NMD exception
ENST00000623661.1	alternative 3' UTR
ENST00000410005.2	MANE_select
ENST00000450895.2	MANE_select
ENST00000617668.2	upstream ATG
ENST00000399286.3	MANE_select
ENST00000399286.3	alternative 5' UTR
ENST00000416357.6	alternative 5' UTR
ENST00000489175.1	FLJ38123
ENST00000313806.9	FLJ34865
ENST00000313806.9	MANE_select
ENST00000482533.5	NP_981962.1
ENST00000481448.5	FLJ16823
ENST00000487990.5	NP_981962.1
ENST00000487990.5	alternative 5' UTR
ENST00000349499.3	FLJ35414
ENST00000349499.3	MANE_select
ENST00000430635.1	novel transcript
ENST00000651753.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000420877.1	FLJ22133
ENST00000652751.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000675419.1	MANE_select
ENST00000475045.6	FLJ41039
ENST00000475045.6	alternative 5' UTR
ENST00000416754.1	alternative 5' UTR
ENST00000494829.1	DKFZp686K0736
ENST00000651798.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000455028.1	GENCODE experimental pipeline
ENST00000421454.2	GENCODE experimental pipeline
ENST00000431167.1	GENCODE experimental pipeline
ENST00000412240.1	GENCODE experimental pipeline
ENST00000434853.1	GENCODE experimental pipeline
ENST00000440405.2	GENCODE experimental pipeline
ENST00000399215.5	FLJ37896
ENST00000481477.5	novel transcript
ENST00000332131.9	FLJ10798
ENST00000332131.9	MANE_select
ENST00000487297.5	FLJ44404
ENST00000469482.1	novel transcript
ENST00000408914.2	GENCODE experimental pipeline
ENST00000436303.1	GENCODE experimental pipeline
ENST00000290349.11	MANE_select
ENST00000445464.1	GENCODE experimental pipeline
ENST00000452572.1	GENCODE experimental pipeline
ENST00000453159.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000453159.6	GENCODE experimental pipeline
ENST00000662189.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000413862.6	Assembled from SLRseq reads (SRP049776)
ENST00000655785.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656513.1	Assembled from SLRseq reads (SRP049776)
ENST00000661388.1	Assembled from SLRseq reads (SRP049776)
ENST00000667457.1	Assembled from SLRseq reads (SRP049776)
ENST00000654957.1	Assembled from SLRseq reads (SRP049776)
ENST00000666303.1	Assembled from SLRseq reads (SRP049776)
ENST00000608641.6	Assembled from SLRseq reads (SRP049776)
ENST00000419943.1	GENCODE experimental pipeline
ENST00000290354.6	MANE_select
ENST00000270190.8	alternative 5' UTR
ENST00000399151.3	KIAA0933, FLJ22825
ENST00000492760.1	novel transcript
ENST00000463668.1	FLJ21442
ENST00000437106.1	GENCODE experimental pipeline
ENST00000399149.2	GENCODE experimental pipeline
ENST00000400485.6	AT-AC splicing between exons 4 and 5
ENST00000400485.6	GENCODE experimental pipeline
ENST00000400485.6	KIAA0136, FLJ21674
ENST00000400485.6	MANE_select
ENST00000400485.6	non canonical U12
ENST00000397184.2	GENCODE experimental pipeline
ENST00000314103.6	MANE_select
ENST00000444161.1	GENCODE experimental pipeline
ENST00000429588.1	GENCODE experimental pipeline
ENST00000428667.1	GENCODE experimental pipeline
ENST00000399135.6	MANE_select
ENST00000433951.1	GENCODE experimental pipeline
ENST00000478313.1	CAGE supported TSS
ENST00000660763.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000457669.1	GENCODE experimental pipeline
ENST00000430607.1	GENCODE experimental pipeline
ENST00000290399.11	MANE_select
ENST00000674895.2	CAGE supported TSS
ENST00000674895.2	alternative 5' UTR
ENST00000674895.2	upstream ATG
ENST00000399120.5	alternative 5' UTR
ENST00000675307.1	alternative 5' UTR
ENST00000448340.5	alternative 5' UTR
ENST00000427746.1	alternative 5' UTR
ENST00000434195.1	GENCODE experimental pipeline
ENST00000653177.1	Assembled from SLRseq reads (SRP049776)
ENST00000637940.2	Assembled from SLRseq reads (SRP049776)
ENST00000430068.1	GENCODE experimental pipeline
ENST00000400819.2	GENCODE experimental pipeline
ENST00000329553.3	MANE_select
ENST00000464265.5	FLJ22658
ENST00000360525.9	MANE_select
ENST00000399017.6	FLJ43484
ENST00000354749.6	DKFZp686M0150
ENST00000424733.1	GENCODE experimental pipeline
ENST00000440629.1	GENCODE experimental pipeline
ENST00000497493.1	FLJ44497
ENST00000399000.7	DKFZp686N0127
ENST00000309117.11	MANE_select
ENST00000608405.2	CAGE supported TSS
ENST00000663813.1	Assembled from SLRseq reads (SRP049776)
ENST00000646523.1	alternative 5' UTR
ENST00000647425.1	alternative 5' UTR
ENST00000647188.2	MANE_select
ENST00000647188.2	alternative 5' UTR
ENST00000647504.1	NP_001334652.1
ENST00000643624.1	alternative 5' UTR
ENST00000643551.1	alternative 5' UTR
ENST00000426672.6	alternative 5' UTR
ENST00000398960.7	alternative 5' UTR
ENST00000455097.6	alternative 5' UTR
ENST00000643854.1	alternative 5' UTR
ENST00000645424.1	confirm experimentally
ENST00000642309.1	alternative 5' UTR
ENST00000398956.2	NP_569122.1
ENST00000398956.2	confirm experimentally
ENST00000667151.1	Assembled from SLRseq reads (SRP049776)
ENST00000609713.2	MANE_select
ENST00000417138.1	GENCODE experimental pipeline
ENST00000495344.5	non canonical TEC
ENST00000495344.5	non-canonical splicing between exons 2 and 3
ENST00000398925.5	alternative 5' UTR
ENST00000398928.5	alternative 5' UTR
ENST00000443341.5	alternative 5' UTR
ENST00000417042.5	alternative 5' UTR
ENST00000398938.7	MANE_select
ENST00000398938.7	alternative 5' UTR
ENST00000398932.5	alternative 5' UTR
ENST00000438657.5	alternative 5' UTR
ENST00000398930.5	alternative 5' UTR
ENST00000398927.1	alternative 5' UTR
ENST00000444977.1	GENCODE experimental pipeline
ENST00000423089.1	GENCODE experimental pipeline
ENST00000414189.5	GENCODE experimental pipeline
ENST00000288319.12	CAGE supported TSS
ENST00000288319.12	LR annotation
ENST00000288319.12	MANE_select
ENST00000453032.6	NP_001129627
ENST00000398919.6	alternative 5' UTR
ENST00000442212.1	GENCODE experimental pipeline
ENST00000656161.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663481.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448579.5	novel transcript
ENST00000411989.5	novel transcript
ENST00000429621.1	novel transcript
ENST00000360214.8	CAGE supported TSS
ENST00000360214.8	FLJ39522
ENST00000360214.8	LR annotation
ENST00000360214.8	upstream ATG
ENST00000665212.1	alternative 5' UTR
ENST00000360938.8	MANE_select
ENST00000360938.8	alternative 5' UTR
ENST00000432278.5	alternative 5' UTR
ENST00000666778.1	alternative 5' UTR
ENST00000653642.1	alternative 5' UTR
ENST00000662305.1	alternative 5' UTR
ENST00000456966.1	alternative 5' UTR
ENST00000663561.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661563.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664415.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670092.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000380931.6	FLJ45139
ENST00000657019.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654496.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671381.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659831.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657276.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653449.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658721.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665758.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669345.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660489.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000415824.1	GENCODE experimental pipeline
ENST00000671617.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440379.2	GENCODE experimental pipeline
ENST00000615324.2	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000660602.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000416842.1	GENCODE experimental pipeline
ENST00000671443.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000434589.1	GENCODE experimental pipeline
ENST00000451820.1	GENCODE experimental pipeline
ENST00000433952.1	GENCODE experimental pipeline
ENST00000655642.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417335.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000417335.2	GENCODE experimental pipeline
ENST00000663162.1	Assembled from SLRseq reads (SRP049776)
ENST00000652155.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000666868.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419664.1	GENCODE experimental pipeline
ENST00000440714.1	GENCODE experimental pipeline
ENST00000467573.1	GENCODE experimental pipeline
ENST00000437262.1	GENCODE experimental pipeline
ENST00000331573.8	FLJ10593
ENST00000331573.8	MANE_select
ENST00000342449.8	MANE_select
ENST00000446924.5	FLJ43918
ENST00000419324.1	GENCODE experimental pipeline
ENST00000435608.1	GENCODE experimental pipeline
ENST00000438852.1	GENCODE experimental pipeline
ENST00000423274.2	GENCODE experimental pipeline
ENST00000380749.10	FLJ27265
ENST00000380749.10	MANE_select
ENST00000652622.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000444889.1	GENCODE experimental pipeline
ENST00000650376.1	alternative 5' UTR
ENST00000649170.1	CAGE supported TSS
ENST00000649170.1	LR annotation
ENST00000649170.1	MANE_select
ENST00000650208.1	NMD likely if extended
ENST00000478273.5	GENCODE experimental pipeline
ENST00000288350.8	DKFZp686P1839
ENST00000288350.8	MANE_select
ENST00000358268.6	Alternatively spliced 5' UTR, shares CDS with AF121781.16-001
ENST00000358268.6	alternative 5' UTR
ENST00000484878.5	novel transcript
ENST00000491625.5	novel transcript
ENST00000490184.5	novel transcript
ENST00000466954.5	novel transcript
ENST00000333634.9	upstream ATG
ENST00000450079.1	GENCODE experimental pipeline
ENST00000431743.1	GENCODE experimental pipeline
ENST00000411867.1	GENCODE experimental pipeline
ENST00000380618.5	alternative 5' UTR
ENST00000670883.1	Assembled from SLRseq reads (SRP049776)
ENST00000670883.1	novel transcript FLJ26079
ENST00000489821.5	Assembled from SLRseq reads (SRP049776)
ENST00000670049.1	Assembled from SLRseq reads (SRP049776)
ENST00000661806.1	Assembled from SLRseq reads (SRP049776)
ENST00000329618.7	Assembled from SLRseq reads (SRP049776)
ENST00000380604.8	Assembled from SLRseq reads (SRP049776)
ENST00000416555.1	GENCODE experimental pipeline
ENST00000419826.2	LOC440782
ENST00000380588.4	FLJ35197
ENST00000328619.10	MANE_select
ENST00000400454.6	MANE_select
ENST00000455354.1	GENCODE experimental pipeline
ENST00000670068.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665522.1	Assembled from SLRseq reads (SRP049776)
ENST00000441268.2	novel transcript FLJ37173
ENST00000654244.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000435493.2	Assembled from SLRseq reads (SRP049776)
ENST00000435493.2	novel transcript
ENST00000660097.1	Assembled from SLRseq reads (SRP049776)
ENST00000446910.1	novel transcript
ENST00000330333.11	MANE_select
ENST00000440221.2	GENCODE experimental pipeline
ENST00000433378.1	GENCODE experimental pipeline
ENST00000357985.7	FLJ43540
ENST00000357985.7	MANE_select
ENST00000398652.7	non canonical polymorphism
ENST00000436410.5	alternative 5' UTR
ENST00000435611.6	alternative 5' UTR
ENST00000330714.8	MANE_select
ENST00000495892.1	FLJ44119
ENST00000416447.1	alternative 5' UTR
ENST00000680862.1	alternative 5' UTR
ENST00000482953.5	FLJ16669
ENST00000474368.1	FLJ42345
ENST00000398632.3	FLJ46001
ENST00000679911.1	alternative 5' UTR
ENST00000680347.1	alternative 5' UTR
ENST00000681867.1	alternative 5' UTR
ENST00000681415.1	alternative 5' UTR
ENST00000680182.1	alternative 5' UTR
ENST00000679464.1	alternative 5' UTR
ENST00000681191.1	alternative 5' UTR
ENST00000679445.1	alternative 5' UTR
ENST00000681857.1	alternative 5' UTR
ENST00000398600.6	FLJ39036
ENST00000679626.1	alternative 5' UTR
ENST00000413778.6	alternative 5' UTR
ENST00000419044.6	alternative 5' UTR
ENST00000455164.6	alternative 5' UTR
ENST00000681849.1	alternative 5' UTR
ENST00000679705.1	alternative 5' UTR
ENST00000681266.1	alternative 5' UTR
ENST00000417963.6	alternative 5' UTR
ENST00000398598.8	MANE_select
ENST00000398598.8	alternative 5' UTR
ENST00000681896.1	alternative 5' UTR
ENST00000680629.1	alternative 5' UTR
ENST00000680760.1	alternative 5' UTR
ENST00000680176.1	alternative 5' UTR
ENST00000680776.1	alternative 5' UTR
ENST00000681607.1	alternative 5' UTR
ENST00000680536.1	alternative 5' UTR
ENST00000679408.1	alternative 5' UTR
ENST00000681039.1	alternative 5' UTR
ENST00000681671.1	alternative 5' UTR
ENST00000679543.1	alternative 5' UTR
ENST00000680364.1	alternative 5' UTR
ENST00000411427.3	GENCODE experimental pipeline
ENST00000679263.1	alternative 5' UTR
ENST00000676973.1	alternative 5' UTR
ENST00000679054.1	alternative 5' UTR
ENST00000678348.1	alternative 5' UTR
ENST00000332149.10	CAGE supported TSS
ENST00000332149.10	MANE_select
ENST00000458356.6	alternative 5' UTR
ENST00000458356.6	upstream ATG
ENST00000454499.6	alternative 5' UTR
ENST00000455813.1	alternative 5' UTR
ENST00000415820.1	Long non-coding RNA-422
ENST00000418874.1	GENCODE experimental pipeline
ENST00000413718.1	novel transcript
ENST00000669036.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667584.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432830.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432830.2	novel transcript
ENST00000661908.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669012.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656530.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658211.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657727.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000332512.8	FLJ14518
ENST00000332512.8	MANE_select
ENST00000423276.1	GENCODE experimental pipeline
ENST00000398548.6	CAGE supported TSS
ENST00000398548.6	MANE_select
ENST00000398548.6	upstream ATG
ENST00000269844.5	upstream ATG
ENST00000458654.1	GENCODE experimental pipeline
ENST00000432411.1	GENCODE experimental pipeline
ENST00000449165.5	DKFZp586F0422
ENST00000329623.11	novel transcript DKFZp686G1128
ENST00000380486.4	FLJ43130
ENST00000380486.4	MANE_select
ENST00000482186.5	novel transcript
ENST00000482084.5	novel transcript FLJ46709
ENST00000490479.1	novel transcript
ENST00000310826.10	MANE_select
ENST00000310826.10	alternative 5' UTR
ENST00000398499.5	DKFZp781N1974
ENST00000398511.3	KIAA1227
ENST00000398511.3	alternative 5' UTR
ENST00000425521.1	alternative 5' UTR
ENST00000449949.5	alternative 5' UTR
ENST00000398497.2	alternative 5' UTR
ENST00000657413.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665885.1	Extended with:  Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665885.1	Extended with: TAGENE_transcript
ENST00000669320.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000429739.1	non canonical polymorphism
ENST00000429739.1	non-canonical splicing between exons 1 and 2
ENST00000429739.1	novel transcript
ENST00000408989.6	FLJ42229, FLJ36335
ENST00000400423.6	FLJ42229
ENST00000329015.2	FLJ33471
ENST00000398449.8	MANE_select
ENST00000398437.1	non canonical TEC
ENST00000398437.1	non-canonical splicing between exons 2 and 3
ENST00000472587.5	FLJ35640
ENST00000496783.1	DKFZp686N10273
ENST00000518498.2	NP_003217.3
ENST00000518498.2	upstream ATG
ENST00000291526.5	MANE_select
ENST00000291527.3	MANE_select
ENST00000433957.7	CAGE supported TSS
ENST00000433957.7	LR annotation
ENST00000476848.5	FLJ16093
ENST00000644384.2	FLJ24003
ENST00000644384.2	MANE_select
ENST00000652415.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000652415.1	NAGNAG splice site
ENST00000652415.1	alternative 5' UTR
ENST00000635189.1	alternative 5' UTR
ENST00000319294.11	MANE_select
ENST00000291536.8	MANE_select
ENST00000493019.1	FLJ32753
ENST00000454800.1	GENCODE experimental pipeline
ENST00000419522.5	alternative 5' UTR
ENST00000398341.7	FLJ22340
ENST00000352133.3	MANE_select
ENST00000352133.3	alternative 5' UTR
ENST00000398343.2	alternative 5' UTR
ENST00000429903.1	GENCODE experimental pipeline
ENST00000442605.1	GENCODE experimental pipeline
ENST00000419628.1	GENCODE experimental pipeline
ENST00000424890.1	GENCODE experimental pipeline
ENST00000291539.11	MANE_select
ENST00000335512.8	FLJ10303, FLJ10445
ENST00000489319.5	FLJ45871
ENST00000420273.2	GENCODE experimental pipeline
ENST00000431150.1	GENCODE experimental pipeline
ENST00000330317.6	alternative 3' UTR
ENST00000492742.5	FLJ31781
ENST00000398208.3	MANE_select
ENST00000460259.1	FLJ31479
ENST00000354250.7	MANE_select
ENST00000291547.10	MANE_select
ENST00000624406.3	alternative 5' UTR
ENST00000618024.4	alternative 5' UTR
ENST00000624921.1	NMD likely if extended
ENST00000398158.5	alternative 5' UTR
ENST00000398165.8	MANE_select
ENST00000398165.8	alternative 5' UTR
ENST00000359624.7	alternative 3' UTR
ENST00000441030.5	alternative 5' UTR
ENST00000478282.1	FLJ40947
ENST00000459639.5	NP_478071.1
ENST00000291552.9	MANE_select
ENST00000496462.1	DKFZp313J1712
ENST00000610664.5	MANE_select
ENST00000668861.1	Assembled from SLRseq reads (SRP049776)
ENST00000450190.1	GENCODE experimental pipeline
ENST00000424933.1	GENCODE experimental pipeline
ENST00000291554.6	MANE_select
ENST00000482775.1	not organism-supported
ENST00000450205.1	GENCODE experimental pipeline
ENST00000442815.1	GENCODE experimental pipeline
ENST00000435702.1	FLJ41733
ENST00000270162.8	FLJ00263
ENST00000270162.8	MANE_select
ENST00000644750.1	alternative 5' UTR
ENST00000613488.3	MANE_select
ENST00000448049.1	novel transcript FLJ38036
ENST00000342757.3	novel transcript FLJ46587
ENST00000332440.4	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000332440.4	novel transcript
ENST00000426942.5	novel transcript
ENST00000651216.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000427188.1	novel transcript DKFZp686N10165
ENST00000663956.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000436359.1	GENCODE experimental pipeline
ENST00000291560.7	MANE_select
ENST00000398116.2	GENCODE experimental pipeline
ENST00000599962.2	MANE_select
ENST00000340648.6	FLJ31701
ENST00000340648.6	MANE_select
ENST00000470886.1	FLJ42629
ENST00000291565.9	MANE_select
ENST00000438837.1	GENCODE experimental pipeline
ENST00000327574.4	FLJ31940
ENST00000476313.5	novel transcript
ENST00000343528.10	non canonical TEC
ENST00000343528.10	non-canonical splice donor site between exons 1 and 2
ENST00000660472.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000291568.7	LR annotation
ENST00000291568.7	MANE_select
ENST00000497547.2	MANE_select
ENST00000467112.5	DKFZp434C085
ENST00000400385.2	FLJ46757
ENST00000449877.1	GENCODE experimental pipeline
ENST00000291572.13	DKFZp762M1415
ENST00000291572.13	MANE_select
ENST00000448287.5	alternative 5' UTR
ENST00000398061.5	FLJ22482
ENST00000398061.5	alternative 5' UTR
ENST00000327505.6	alternative 5' UTR
ENST00000445582.5	alternative 5' UTR
ENST00000398063.6	alternative 5' UTR
ENST00000398058.5	alternative 5' UTR
ENST00000457068.5	alternative 5' UTR
ENST00000467358.5	FLJ43816
ENST00000674444.1	CAGE supported TSS
ENST00000291574.9	GENCODE experimental pipeline
ENST00000291574.9	MANE_select
ENST00000459741.5	DKFZp667I0321
ENST00000486746.5	confirm experimentally
ENST00000468864.1	FLJ37691
ENST00000416034.1	GENCODE experimental pipeline
ENST00000291576.12	MANE_select
ENST00000617716.4	MANE_select
ENST00000623476.2	non canonical U12
ENST00000495007.5	AT-AC splicing between exons 5 and 6
ENST00000495007.5	novel transcript
ENST00000493883.5	novel transcript
ENST00000480786.1	novel transcript
ENST00000291577.11	AT-AC splicing between exons 6 and 7
ENST00000291577.11	GENCODE experimental pipeline
ENST00000291577.11	MANE_select
ENST00000488392.1	novel transcript
ENST00000419699.1	AT-AC splicing between exons 4 and 5
ENST00000470545.1	novel transcript
ENST00000620015.4	non canonical U12
ENST00000620528.5	MANE_select
ENST00000620528.5	non canonical U12
ENST00000624120.3	non canonical U12
ENST00000411694.1	GENCODE experimental pipeline
ENST00000411956.1	GENCODE experimental pipeline
ENST00000423967.1	GENCODE experimental pipeline
ENST00000400379.7	KIAA0653
ENST00000400377.3	FLJ33173
ENST00000623960.4	MANE_select
ENST00000619053.1	CAGE supported TSS
ENST00000628202.3	MANE_select
ENST00000628202.3	NAGNAG splice site
ENST00000628202.3	NP_787063.1
ENST00000442785.1	GENCODE experimental pipeline
ENST00000291582.6	MANE_select
ENST00000349048.9	MANE_select
ENST00000474114.5	DKFZp686G1648
ENST00000498841.5	DKFZp686L2097
ENST00000467315.5	FLJ30173
ENST00000460521.5	FLJ40909
ENST00000444409.1	GENCODE experimental pipeline
ENST00000339818.9	MANE_select
ENST00000448927.1	FLJ00235
ENST00000448927.1	GENCODE experimental pipeline
ENST00000426029.1	GENCODE experimental pipeline
ENST00000300482.9	alternative 5' UTR
ENST00000431901.5	alternative 5' UTR
ENST00000300481.13	QC splicing correct
ENST00000300481.13	non-canonical splice donor site between exons 11 and 12
ENST00000423310.2	GENCODE experimental pipeline
ENST00000456880.1	FLJ32713
ENST00000426578.1	GENCODE experimental pipeline
ENST00000291592.6	MANE_select
ENST00000443300.1	GENCODE experimental pipeline
ENST00000443620.1	GENCODE experimental pipeline
ENST00000445440.1	GENCODE experimental pipeline
ENST00000449713.1	GENCODE experimental pipeline
ENST00000323084.9	CAGE supported TSS
ENST00000323084.9	LR annotation
ENST00000323084.9	MANE_select
ENST00000451035.2	novel transcript
ENST00000430181.1	novel transcript
ENST00000465978.1	novel transcript
ENST00000658407.1	Assembled from SLRseq reads (SRP049776)
ENST00000400375.1	MANE_select
ENST00000391621.1	MANE_select
ENST00000391620.2	MANE_select
ENST00000400374.4	MANE_select
ENST00000400372.1	MANE_select
ENST00000400368.1	MANE_select
ENST00000609664.2	MANE_select
ENST00000334662.2	MANE_select
ENST00000397911.5	MANE_select
ENST00000380095.2	MANE_select
ENST00000334670.9	MANE_select
ENST00000391618.1	MANE_select
ENST00000397907.1	MANE_select
ENST00000360770.3	MANE_select
ENST00000435590.1	GENCODE experimental pipeline
ENST00000391617.1	MANE_select
ENST00000400365.3	MANE_select
ENST00000345496.7	MANE_select
ENST00000481546.1	FLJ16170, DKFZp586L2318, FLJ90662
ENST00000496395.2	not organism-supported
ENST00000417820.1	GENCODE experimental pipeline
ENST00000332859.11	MANE_select
ENST00000330938.8	MANE_select
ENST00000475170.5	FLJ39897
ENST00000652462.1	MANE_select
ENST00000652462.1	genebuild_only_MANE
ENST00000355153.8	FLJ38673
ENST00000302347.10	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000523663.5	alternative 5' UTR
ENST00000522931.5	alternative 5' UTR
ENST00000517563.5	alternative 5' UTR
ENST00000524251.1	alternative 5' UTR
ENST00000517819.5	alternative 5' UTR
ENST00000521995.1	alternative 5' UTR
ENST00000441379.5	GENCODE experimental pipeline
ENST00000660377.1	Assembled from SLRseq reads (SRP049776)
ENST00000657006.1	Assembled from SLRseq reads (SRP049776)
ENST00000658179.1	Assembled from SLRseq reads (SRP049776)
ENST00000667826.1	Assembled from SLRseq reads (SRP049776)
ENST00000663249.1	Assembled from SLRseq reads (SRP049776)
ENST00000654166.1	Assembled from SLRseq reads (SRP049776)
ENST00000664358.1	Assembled from SLRseq reads (SRP049776)
ENST00000291634.11	MANE_select
ENST00000479127.5	novel transcript
ENST00000485207.1	novel transcript
ENST00000616815.1	CAGE supported TSS
ENST00000434081.1	GENCODE experimental pipeline
ENST00000615826.1	novel transcript
ENST00000429427.1	GENCODE experimental pipeline
ENST00000348831.9	MANE_select
ENST00000449478.1	alternative 5' UTR
ENST00000631642.1	NMD likely if extended
ENST00000596207.2	CAGE supported TSS
ENST00000660971.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670852.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670960.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665973.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000331343.11	isoform A
ENST00000334538.13	isoform B
ENST00000349485.10	MANE_select
ENST00000349485.10	isoform C
ENST00000647108.1	GENCODE experimental pipeline
ENST00000652705.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000441947.1	GENCODE experimental pipeline
ENST00000441947.1	non-canonical splicing between exons 2 and 3
ENST00000441947.1	novel transcript
ENST00000445242.1	GENCODE experimental pipeline
ENST00000416722.1	confirm experimentally
ENST00000416722.1	novel transcript
ENST00000429327.1	GENCODE experimental pipeline
ENST00000456613.1	GENCODE experimental pipeline
ENST00000651438.1	CAGE supported TSS
ENST00000651438.1	LR annotation
ENST00000651438.1	MANE_select
ENST00000355480.10	A GC-rich tandem repeat in exon 33 results in a polymorphism that accounts for the difference in lenghth between our translation and that of the Refseq NP_085059
ENST00000355480.10	CAGE supported TSS
ENST00000355480.10	LR annotation
ENST00000359759.8	CAGE supported TSS
ENST00000473212.1	FLJ40897
ENST00000446475.1	GENCODE experimental pipeline
ENST00000485206.1	FLJ38752
ENST00000311124.9	MANE_select
ENST00000380010.8	NP_001192135.1
ENST00000650808.1	alternative 5' UTR
ENST00000427839.5	alternative 5' UTR
ENST00000443742.1	alternative 5' UTR
ENST00000528477.1	alternative 5' UTR
ENST00000651099.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000424569.1	GENCODE experimental pipeline
ENST00000662558.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671273.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651182.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000655224.1	Assembled from SLRseq reads (SRP049776)
ENST00000400314.5	NP_065389.2
ENST00000681687.1	MANE_select
ENST00000681687.1	align_id:3670919|asmbl_161084
ENST00000609985.1	nested 454 RNA-Seq supported
ENST00000610200.1	nested 454 RNA-Seq supported
ENST00000423045.2	nested 454 RNA-Seq supported
ENST00000400310.5	FLJ36982
ENST00000549265.1	alternative 5' UTR
ENST00000380008.2	Assembled from SLRseq reads (SRP049776)
ENST00000380008.2	FLJ41858
ENST00000380008.2	GENCODE experimental pipeline
ENST00000658513.1	Assembled from SLRseq reads (SRP049776)
ENST00000361866.8	MANE_select
ENST00000361866.8	NP_001839
ENST00000451618.1	GENCODE experimental pipeline
ENST00000429512.1	GENCODE experimental pipeline
ENST00000435738.1	GENCODE experimental pipeline
ENST00000428242.1	GENCODE experimental pipeline
ENST00000300527.9	MANE_select
ENST00000300527.9	NP_001840
ENST00000436769.5	alternative 5' UTR
ENST00000397763.5	NP_478054
ENST00000498355.6	non canonical TEC
ENST00000498355.6	non-canonical splicing between exons 14 and 15
ENST00000397746.8	MANE_select
ENST00000446649.1	GENCODE experimental pipeline
ENST00000330205.10	NP_115637
ENST00000291672.6	MANE_select
ENST00000291672.6	NP_001136326
ENST00000356396.8	alternative 3' UTR
ENST00000491729.1	FLJ39450
ENST00000397728.8	MANE_select
ENST00000474319.1	FLJ35015
ENST00000522411.5	NP_001138908
ENST00000418029.2	GENCODE experimental pipeline
ENST00000455567.2	Assembled from SLRseq reads (SRP049776)
ENST00000669476.1	Assembled from SLRseq reads (SRP049776)
ENST00000654493.1	Assembled from SLRseq reads (SRP049776)
ENST00000656253.1	Assembled from SLRseq reads (SRP049776)
ENST00000670190.1	Assembled from SLRseq reads (SRP049776)
ENST00000664725.1	Assembled from SLRseq reads (SRP049776)
ENST00000414659.5	FLJ10508
ENST00000662666.1	Assembled from SLRseq reads (SRP049776)
ENST00000496607.5	FLJ45306
ENST00000486937.5	FLJ44336
ENST00000291688.6	MANE_select
ENST00000291688.6	genebuild_only_MANE
ENST00000426537.1	alternative 5' UTR
ENST00000444966.1	GENCODE experimental pipeline
ENST00000430259.1	FLJ42499
ENST00000430259.1	GENCODE experimental pipeline
ENST00000397701.9	FLJ46907
ENST00000397701.9	MANE_select
ENST00000397701.9	alternative 5' UTR
ENST00000468924.5	novel transcript
ENST00000397694.5	isoform C
ENST00000329319.7	isoform A
ENST00000339195.10	isoform B
ENST00000397692.5	isoform D
ENST00000492864.1	novel transcript
ENST00000291691.12	FLJ31825
ENST00000291691.12	MANE_select
ENST00000397679.5	FLJ39322
ENST00000490468.5	FLJ13947
ENST00000359568.10	FLJ36604
ENST00000359568.10	MANE_select
ENST00000417564.3	MANE_select
ENST00000417564.3	NP_055966
ENST00000651436.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000400274.5	KIAA0184
ENST00000400274.5	NP_001139588
ENST00000457905.7	NP_996772
ENST00000466639.5	NP_001139587
ENST00000435722.7	NP_996773
ENST00000494435.5	FLJ40917
ENST00000494435.5	novel transcript
ENST00000480553.1	FLJ34471
ENST00000480553.1	novel transcript
ENST00000472364.1	FLJ42741
ENST00000481883.1	novel transcript
ENST00000478105.5	FLJ30245
ENST00000478105.5	novel transcript
ENST00000442434.1	GENCODE experimental pipeline
ENST00000291700.9	MANE_select
ENST00000397648.1	alternative 5' UTR
ENST00000397638.6	alternative 5' UTR
ENST00000397637.5	FLJ41358
ENST00000397637.5	alternative 5' UTR
ENST00000355680.8	FLJ41656
ENST00000355680.8	MANE_select
ENST00000486520.1	FLJ43503, DKFZp686C1564
ENST00000419906.1	GENCODE experimental pipeline
ENST00000427757.1	GENCODE experimental pipeline
ENST00000424770.1	GENCODE experimental pipeline
ENST00000398242.2	GENCODE experimental pipeline
ENST00000447898.1	FLJ10674
ENST00000437781.1	FLJ12852
ENST00000413768.1	FLJ31573
ENST00000413768.1	non canonical polymorphism
ENST00000440946.1	KIAA0187
ENST00000453395.1	GENCODE experimental pipeline
ENST00000417657.1	GENCODE experimental pipeline
ENST00000343518.6	GENCODE experimental pipeline
ENST00000422014.1	GENCODE experimental pipeline
ENST00000438441.1	GENCODE experimental pipeline
ENST00000428118.1	GENCODE experimental pipeline
ENST00000456143.1	GENCODE experimental pipeline
ENST00000417863.1	GENCODE experimental pipeline
ENST00000444162.1	GENCODE experimental pipeline
ENST00000443989.1	GENCODE experimental pipeline
ENST00000427602.1	GENCODE experimental pipeline
ENST00000422332.1	GENCODE experimental pipeline
ENST00000609641.1	not best-in-genome evidence
ENST00000493696.2	GENCODE experimental pipeline
ENST00000359963.4	MANE_select
ENST00000656324.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430910.1	GENCODE experimental pipeline
ENST00000426585.5	FLJ37713
ENST00000426585.5	GENCODE experimental pipeline
ENST00000670988.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665507.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425038.1	GENCODE experimental pipeline
ENST00000442797.1	GENCODE experimental pipeline
ENST00000422608.1	GENCODE experimental pipeline
ENST00000442403.1	GENCODE experimental pipeline
ENST00000448961.1	GENCODE experimental pipeline
ENST00000412238.1	GENCODE experimental pipeline
ENST00000427470.1	GENCODE experimental pipeline
ENST00000458718.2	IGKV1/OR22-5*02
ENST00000458718.2	P
ENST00000523309.2	IGKV2/OR22-4*01
ENST00000523309.2	P
ENST00000521969.2	P
ENST00000517943.2	P
ENST00000521497.2	IGKV1/OR22-1*02
ENST00000521497.2	P
ENST00000651146.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000465611.1	FLJ32690
ENST00000441006.5	FLJ40726
ENST00000441006.5	GENCODE experimental pipeline
ENST00000636648.1	acyl-CoA synthetase medium-chain family member 1 (ACSM1) pseudogene
ENST00000319363.11	MANE_select
ENST00000429106.1	GENCODE experimental pipeline
ENST00000331437.4	MANE_select
ENST00000399875.1	FLJ38290
ENST00000662102.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654656.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668330.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000336737.8	MANE_select
ENST00000477157.5	FLJ41652
ENST00000329743.3	GENCODE experimental pipeline
ENST00000399837.8	LR annotation
ENST00000399837.8	MANE_select
ENST00000399837.8	alternative 5' UTR
ENST00000649540.1	LR 3' extension
ENST00000649540.1	alternative 5' UTR
ENST00000543038.1	alternative 5' UTR
ENST00000428401.1	GENCODE experimental pipeline
ENST00000344033.5	GENCODE experimental pipeline
ENST00000428828.1	GENCODE experimental pipeline
ENST00000453421.1	Cat eye syndrome critial region candidate gene number 9 (CECR9) partial sequence. PMID:11381032
ENST00000453421.1	GENCODE experimental pipeline
ENST00000455617.1	GENCODE experimental pipeline
ENST00000437347.1	GENCODE experimental pipeline
ENST00000651475.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000608960.1	CAGE supported TSS
ENST00000399813.1	alternative 5' UTR
ENST00000327451.11	MANE_select
ENST00000467228.1	FLJ38387
ENST00000443935.5	GENCODE experimental pipeline
ENST00000253413.10	MANE_select
ENST00000399796.6	NP_001034456.1
ENST00000399798.6	NP_001034455.1
ENST00000317582.10	MANE_select
ENST00000493680.5	alternative 5' UTR
ENST00000622694.5	MANE_select
ENST00000342111.9	NMD exception
ENST00000551952.5	alternative 5' UTR
ENST00000600723.1	CAGE supported TSS
ENST00000441493.7	MANE_select
ENST00000495076.5	FLJ45579
ENST00000414725.6	KIAA1364
ENST00000657505.1	Assembled from SLRseq reads (SRP049776)
ENST00000429618.1	GENCODE experimental pipeline
ENST00000441167.1	GENCODE experimental pipeline
ENST00000441167.1	non canonical TEC
ENST00000411920.1	GENCODE experimental pipeline
ENST00000426483.1	GENCODE experimental pipeline
ENST00000399744.8	MANE_select
ENST00000427227.2	GENCODE experimental pipeline
ENST00000330423.8	MANE_select
ENST00000416740.2	alternative 5' UTR
ENST00000623543.1	prediction only
ENST00000215794.8	MANE_select
ENST00000428850.2	GENCODE experimental pipeline
ENST00000342005.4	GENCODE experimental pipeline
ENST00000412938.1	GENCODE experimental pipeline
ENST00000614596.2	not best-in-genome evidence
ENST00000622906.1	GENCODE experimental pipeline
ENST00000331444.12	MANE_select
ENST00000357068.11	MANE_select
ENST00000429300.5	FLJ33744
ENST00000609630.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000263196.12	MANE_select
ENST00000263196.12	non canonical conserved
ENST00000412461.2	GENCODE experimental pipeline
ENST00000450724.1	GENCODE experimental pipeline
ENST00000252137.11	MANE_select
ENST00000399635.4	MANE_select
ENST00000086933.3	MANE_select
ENST00000086933.3	NM_005315.1
ENST00000086933.3	NP_005306.1
ENST00000086933.3	PMID: 9441739
ENST00000215882.10	MANE_select
ENST00000427926.6	MANE_select
ENST00000658236.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000433141.1	GENCODE experimental pipeline
ENST00000446618.1	GENCODE experimental pipeline
ENST00000664918.1	Assembled from SLRseq reads (SRP049776)
ENST00000263208.5	MANE_select
ENST00000399562.9	CAGE supported TSS
ENST00000399562.9	MANE_select
ENST00000399562.9	upstream ATG
ENST00000333130.4	MANE_select
ENST00000263202.15	MANE_select
ENST00000466373.1	FLJ46241
ENST00000407835.6	upstream ATG
ENST00000455750.6	alternative 5' UTR
ENST00000263201.7	CAGE supported TSS
ENST00000263201.7	LR annotation
ENST00000263201.7	MANE_select
ENST00000661478.1	Assembled from SLRseq reads (SRP049776)
ENST00000406028.1	alternative 5' UTR
ENST00000618236.1	CAGE supported TSS
ENST00000403084.1	alternative 5' UTR
ENST00000413119.2	NP_003268
ENST00000420012.1	GENCODE experimental pipeline
ENST00000452326.1	GENCODE experimental pipeline
ENST00000455784.7	MANE_select
ENST00000366425.4	MANE_select
ENST00000649276.2	CAGE supported TSS
ENST00000649276.2	MANE_select
ENST00000329517.11	MANE_select
ENST00000403325.5	alternative 5' UTR
ENST00000424559.2	GENCODE experimental pipeline
ENST00000328554.9	MANE_select
ENST00000328554.9	alternative 5' UTR
ENST00000405640.1	alternative 5' UTR
ENST00000400518.5	NMD exception
ENST00000542719.6	NMD exception
ENST00000462330.5	CAGE supported TSS
ENST00000462330.5	NMD exception
ENST00000400519.6	NAGNAG splice site
ENST00000400521.7	MANE_select
ENST00000400521.7	NMD exception
ENST00000400525.6	NMD exception
ENST00000485358.5	CAGE supported TSS
ENST00000485358.5	NMD exception
ENST00000462843.2	CAGE supported TSS
ENST00000491939.6	DKFZp781E0833
ENST00000420617.1	GENCODE experimental pipeline
ENST00000361682.11	MANE_select
ENST00000361682.11	alternative 5' UTR
ENST00000403710.5	alternative 5' UTR
ENST00000407537.5	alternative 5' UTR
ENST00000412786.5	alternative 5' UTR
ENST00000449653.5	CAGE supported TSS
ENST00000263207.8	MANE_select
ENST00000406259.1	not organism-supported
ENST00000432198.5	alternative 5' UTR
ENST00000398042.6	alternative 5' UTR
ENST00000327374.9	MANE_select
ENST00000434168.5	alternative 5' UTR
ENST00000415503.5	GENCODE experimental pipeline
ENST00000608610.5	NAGNAG splice site
ENST00000609191.1	nested 454 RNA-Seq supported
ENST00000351989.8	MANE_select
ENST00000412713.1	GENCODE experimental pipeline
ENST00000252136.12	MANE_select
ENST00000444256.1	not organism-supported
ENST00000430524.6	MANE_select
ENST00000430524.6	genebuild_only_MANE
ENST00000334554.12	MANE_select
ENST00000439765.4	GENCODE experimental pipeline
ENST00000439765.4	MANE_select
ENST00000439765.4	not best-in-genome evidence
ENST00000609602.1	CAGE supported TSS
ENST00000043402.8	MANE_select
ENST00000248879.8	MANE_select
ENST00000454636.1	not best-in-genome evidence
ENST00000458154.1	GENCODE experimental pipeline
ENST00000620909.1	GENCODE experimental pipeline
ENST00000619998.1	MANE_select
ENST00000619998.1	not best-in-genome evidence
ENST00000614395.4	GENCODE experimental pipeline
ENST00000612978.5	MANE_select
ENST00000620199.4	GENCODE experimental pipeline
ENST00000652586.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000619918.1	MANE_select
ENST00000611403.1	GENCODE experimental pipeline
ENST00000413504.1	GENCODE experimental pipeline
ENST00000434783.3	not best-in-genome evidence
ENST00000667786.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000400451.7	MANE_select
ENST00000437275.5	alternative 5' UTR
ENST00000622235.5	MANE_select
ENST00000623402.1	NP_699165.3
ENST00000328879.9	MANE_select
ENST00000444967.5	GENCODE experimental pipeline
ENST00000458248.5	alternative 5' UTR
ENST00000426448.1	GENCODE experimental pipeline
ENST00000436075.1	GENCODE experimental pipeline
ENST00000263205.11	MANE_select
ENST00000420225.1	GENCODE experimental pipeline
ENST00000443839.1	GENCODE experimental pipeline
ENST00000447821.1	GENCODE experimental pipeline
ENST00000411545.2	GENCODE experimental pipeline
ENST00000450925.6	DKFZp434N035
ENST00000255882.11	MANE_select
ENST00000449120.1	alternative 5' UTR
ENST00000215727.10	MANE_select
ENST00000215730.12	MANE_select
ENST00000354336.8	MANE_select
ENST00000444039.1	GENCODE experimental pipeline
ENST00000441376.6	QC splicing correct
ENST00000441376.6	alternative 5' UTR
ENST00000646124.2	CAGE supported TSS
ENST00000646124.2	LR annotation
ENST00000646124.2	MANE_select
ENST00000495142.6	TB0000035-DNA_A01-LRAAD-01:Read_179838-Barcode%3DBC260:length%3D4507
ENST00000215742.9	MANE_select
ENST00000399133.2	alternative 5' UTR
ENST00000488975.1	not organism-supported
ENST00000436079.1	GENCODE experimental pipeline
ENST00000662660.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000382932.3	MANE_select
ENST00000450652.2	Assembled from SLRseq reads (SRP049776)
ENST00000450652.2	GENCODE experimental pipeline
ENST00000442047.2	GENCODE experimental pipeline
ENST00000641915.1	NP_001078834.1
ENST00000461808.5	FLJ42953
ENST00000624908.1	prediction only
ENST00000398241.3	partial duplication of 3' end of BCR gene (chromosome 22 clone U07000.1)
ENST00000420508.1	GENCODE experimental pipeline
ENST00000329949.3	DKFZP434P211
ENST00000329949.3	GENCODE experimental pipeline
ENST00000420708.1	GENCODE experimental pipeline
ENST00000451257.5	GENCODE experimental pipeline
ENST00000415376.5	Seems to be duplicated in KB-1183D5.13
ENST00000424410.1	not best-in-genome evidence
ENST00000417463.1	GENCODE experimental pipeline
ENST00000405188.8	non canonical other
ENST00000405188.8	not best-in-genome evidence
ENST00000401924.5	non canonical other
ENST00000401924.5	not best-in-genome evidence
ENST00000441743.1	GENCODE experimental pipeline
ENST00000447720.5	GENCODE experimental pipeline
ENST00000447720.5	Seems to be duplicated in KB-1183D5.11
ENST00000431488.5	not best-in-genome evidence
ENST00000434730.1	GENCODE experimental pipeline
ENST00000416640.2	GENCODE experimental pipeline
ENST00000666255.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000422450.1	GENCODE experimental pipeline
ENST00000407464.7	MANE_select
ENST00000407464.7	alternative 5' UTR
ENST00000407598.2	alternative 5' UTR
ENST00000456303.6	not best-in-genome evidence
ENST00000432134.7	upstream ATG
ENST00000453397.5	not best-in-genome evidence
ENST00000413877.5	not best-in-genome evidence
ENST00000417708.5	not best-in-genome evidence
ENST00000463608.5	not best-in-genome evidence
ENST00000462560.6	not best-in-genome evidence
ENST00000342192.9	MANE_select
ENST00000292778.11	MANE_select
ENST00000292779.4	MANE_select
ENST00000292779.4	There is a deletion in what would be the 3rd coding exon of the cDNAEm:AK093365.1, which means that it cannot be used as evidence. This would have supported the main SwissProt variant (SW:Q8IYX3.2) of 515 amino acids, so we just have this 613 amino acid variant
ENST00000248958.5	MANE_select
ENST00000398831.8	MANE_select
ENST00000398831.8	alternative 3' UTR
ENST00000406385.1	alternative 3' UTR
ENST00000339468.8	MANE_select
ENST00000662004.1	Assembled from SLRseq reads (SRP049776)
ENST00000652589.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000215832.11	GENCODE experimental pipeline
ENST00000215832.11	MANE_select
ENST00000398822.7	Same CDS as variant one but alternative 3' UTR
ENST00000435222.1	GENCODE experimental pipeline
ENST00000263212.10	MANE_select
ENST00000653280.1	Assembled from SLRseq reads (SRP049776)
ENST00000357179.10	MANE_select
ENST00000398793.6	alternative 5' UTR
ENST00000424393.5	alternative 5' UTR
ENST00000437929.5	alternative 5' UTR
ENST00000430142.5	alternative 5' UTR
ENST00000456075.5	alternative 5' UTR
ENST00000449704.5	alternative 5' UTR
ENST00000442653.1	alternative 5' UTR
ENST00000437103.1	alternative 5' UTR
ENST00000434517.1	alternative 5' UTR
ENST00000390282.2	IGLV4-69*01, V5-6
ENST00000620649.1	GENCODE experimental pipeline
ENST00000390287.2	IGLV10-54*02, V11-20
ENST00000390283.2	IGLV8-61*01, V3-4
ENST00000390284.2	IGLV4-60*02, V5-4
ENST00000442890.1	(C22:IGLV3-3.5K)
ENST00000458366.1	GENCODE experimental pipeline
ENST00000390285.4	IGLV6-57*02
ENST00000390286.3	IGLV11-55*02
ENST00000390286.3	ORF due to 19nt V-SPACER
ENST00000420768.1	GENCODE experimental pipeline
ENST00000403807.4	MANE_select
ENST00000624350.1	prediction only
ENST00000610778.1	CAGE supported TSS
ENST00000652112.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000390289.2	IGLV5-52*01, V4-4
ENST00000390290.3	IGLV1-51*01, V1-19
ENST00000390291.2	This is an ORF, due to non-conserved OCTAMER sequence, non-conserved TATA_BOX and an unusual V-NONAMER sequence
ENST00000427632.2	IGLV9-49*02, V5-2
ENST00000390293.1	ORF due to an unusual V-HEPTAMER sequence
ENST00000390293.1	not best-in-genome evidence
ENST00000390294.2	IGLV1-47*02,V1-17
ENST00000453999.1	GENCODE experimental pipeline
ENST00000390295.3	IGLV7-46*02, V3-3
ENST00000390296.2	IGLV5-45*03, V4-2
ENST00000390297.3	IGLV1-44*01, V1-16
ENST00000390298.2	IGLV7-43*01, V3-2
ENST00000390299.2	IGLV1-40*01, V1-13
ENST00000390300.2	IGLV5-37*01. V4-1
ENST00000390301.3	IGLV1-36*01, V1-11
ENST00000451224.1	GENCODE experimental pipeline
ENST00000626650.3	MANE_select
ENST00000302097.3	MANE_select
ENST00000405655.8	MANE_select
ENST00000405655.8	alternative 5' UTR
ENST00000402697.5	alternative 5' UTR
ENST00000439106.5	alternative 5' UTR
ENST00000420709.5	alternative 5' UTR
ENST00000406503.1	alternative 5' UTR
ENST00000403441.1	alternative 5' UTR
ENST00000407120.1	GENCODE experimental pipeline
ENST00000390302.3	IGLV2-33*01,V1-9 (allele)
ENST00000390302.3	ORF due to unusual V-HEPTAMER sequence
ENST00000390303.3	IGLV3-32*01, V2-23P
ENST00000390303.3	This is an ORF due to a non-canonical acceptor splice site and to a Tyrosine instead of the 2nd_CYS at position104
ENST00000390303.3	non canonical conserved
ENST00000661466.1	Assembled from SLRseq reads (SRP049776)
ENST00000652219.1	alternative 5' UTR
ENST00000480559.6	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000480559.6	alternative 5' UTR
ENST00000448514.2	NP_954578.2
ENST00000652249.1	alternative 5' UTR
ENST00000651213.1	alternative 5' UTR
ENST00000417145.2	NP_001269808.1
ENST00000390304.2	IGLV3-27*01, V2-19
ENST00000390305.2	IGLV3-25*02 allele
ENST00000438185.1	GENCODE experimental pipeline
ENST00000390306.2	IGLV2-23*03, V1-7
ENST00000390307.2	IGLV3-22*01, V2-15
ENST00000390307.2	not best-in-genome evidence
ENST00000390308.2	IGLV3-21*02, V2-14
ENST00000390309.2	IGLV3-19*01, V2-13
ENST00000390309.2	The annotated V-heptamer (cacattg) is different to the accepted V-heptamer (cacagtg) in the IMGT database
ENST00000390311.3	IGLV3-16*01, V2-11
ENST00000390312.2	IGLV2-14*01, V1-4
ENST00000390313.3	IGLV3-12*02, V2-8
ENST00000390313.3	V-nonamer is different to what is on the IMGT database: ACAAAAACA
ENST00000390314.2	IGLV2-11*01, V1-3
ENST00000390315.3	IGLV3-10*01, V2-7
ENST00000390316.2	IGLV3-9*01, V2-6
ENST00000390316.2	This gene has an unusual V-heptamer seqeunce (cacagta instead of cacagtg)
ENST00000620395.2	IGLV2-8*01, V1-2
ENST00000620395.2	The V-nonamer is different than the IMGT database: ATCAAAACC
ENST00000390318.2	IGLV4-3*01,V5-1
ENST00000390318.2	This is one of the three functional genes on the IG:V4 subgroup, despite the presence of a stop codon at the 3' end of the V-region
ENST00000390319.2	IGLV3-1*01, V2-1
ENST00000526893.6	MANE_select
ENST00000390320.2	IGLJ1*01
ENST00000390321.2	IGLC1*02
ENST00000390322.2	IGLJ2*01
ENST00000390323.2	IGLC2*02
ENST00000390324.2	IGLJ3*02
ENST00000390325.2	IGLC3*04
ENST00000390327.2	IGLJ5 has an ORFand a non-canonical donor-splice
ENST00000390328.2	IGLJ6 has an ORF
ENST00000410078.2	IGLC6*05
ENST00000415639.1	GENCODE experimental pipeline
ENST00000216036.9	MANE_select
ENST00000615612.2	MANE_select
ENST00000263116.7	upstream ATG
ENST00000341989.9	upstream ATG
ENST00000305877.13	MANE_select
ENST00000458056.2	not best-in-genome evidence
ENST00000440602.1	GENCODE experimental pipeline
ENST00000450776.1	GENCODE experimental pipeline
ENST00000255890.8	Novel transcript
ENST00000433168.5	Novel Transcript
ENST00000420968.5	FLJ31568
ENST00000420968.5	Novel Transcript
ENST00000449711.1	GENCODE experimental pipeline
ENST00000653461.1	Assembled from SLRseq reads (SRP049776)
ENST00000432249.2	GENCODE experimental pipeline
ENST00000458318.2	GENCODE experimental pipeline
ENST00000330377.3	MANE_select
ENST00000317749.9	MANE_select
ENST00000452737.5	non canonical polymorphism
ENST00000451837.5	non canonical polymorphism
ENST00000422506.5	non canonical polymorphism
ENST00000445682.2	non canonical polymorphism
ENST00000421064.5	non canonical polymorphism
ENST00000651432.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000432595.1	non canonical polymorphism
ENST00000441897.5	non canonical polymorphism
ENST00000341976.5	MANE_select
ENST00000248948.4	MANE_select
ENST00000402217.8	CCDS13814.1
ENST00000402217.8	MANE_select
ENST00000484558.3	MANE_select
ENST00000215743.8	MANE_select
ENST00000460352.1	Due to degradation of EST last 100bp can not be assigned
ENST00000344921.11	NP_001304875.1
ENST00000344921.11	a/gc - cag/ splicing between 4th and 5th exons
ENST00000644036.2	MANE_select
ENST00000642727.1	alternative 3' UTR
ENST00000318109.12	MANE_select
ENST00000406855.7	GENCODE experimental pipeline
ENST00000476077.1	NP_940842.2
ENST00000398356.6	NP_110434.2
ENST00000467660.5	Known CDs but no stop codon; subject to no-stop decay
ENST00000316185.8	NP_001020110.1
ENST00000215754.8	MANE_select
ENST00000406213.1	GENCODE experimental pipeline
ENST00000439492.1	GENCODE experimental pipeline
ENST00000290765.9	MANE_select
ENST00000423307.1	Sw:P30711.4
ENST00000215770.6	MANE_select
ENST00000398344.8	alternative 5' UTR
ENST00000421902.1	GENCODE experimental pipeline
ENST00000445894.1	GENCODE experimental pipeline
ENST00000447865.1	alternative 5' UTR
ENST00000454754.5	alternative 5' UTR
ENST00000263119.10	MANE_select
ENST00000263119.10	alternative 5' UTR
ENST00000444093.1	GENCODE experimental pipeline
ENST00000358321.4	MANE_select
ENST00000398292.3	NP_001093251
ENST00000327365.10	MANE_select
ENST00000396982.3	GENCODE experimental pipeline
ENST00000421374.5	alternative 5' UTR
ENST00000314328.14	MANE_select
ENST00000651059.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000416735.5	NMD likely if extended
ENST00000541492.1	NP_001241661
ENST00000424232.5	alternative 5' UTR
ENST00000486108.1	alternative 5' UTR
ENST00000464977.5	alternative 5' UTR
ENST00000444262.6	alternative 5' UTR
ENST00000496258.1	alternative 5' UTR
ENST00000337539.12	MANE_select
ENST00000472248.5	alternative 5' UTR
ENST00000436735.1	alternative 5' UTR
ENST00000439591.1	alternative 5' UTR
ENST00000326341.8	GENCODE experimental pipeline
ENST00000650766.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000412790.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000326010.10	MANE_select
ENST00000435822.6	MANE_select
ENST00000407973.2	alternative 5' UTR
ENST00000215829.8	MANE_select
ENST00000652248.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000651180.1	alternative 5' UTR
ENST00000318753.13	MANE_select
ENST00000456869.5	alternative 5' UTR
ENST00000411974.5	alternative 5' UTR
ENST00000412658.5	alternative 5' UTR
ENST00000445029.5	alternative 5' UTR
ENST00000400382.6	MANE_select
ENST00000400382.6	alternative 5' UTR
ENST00000419133.5	alternative 5' UTR
ENST00000438643.6	QC splicing correct
ENST00000438643.6	alternative 5' UTR
ENST00000452551.5	alternative 5' UTR
ENST00000412898.5	alternative 5' UTR
ENST00000455483.5	alternative 5' UTR
ENST00000430289.5	alternative 5' UTR
ENST00000447416.5	alternative 5' UTR
ENST00000432867.5	alternative 5' UTR
ENST00000451366.5	alternative 5' UTR
ENST00000428855.5	alternative 5' UTR
ENST00000401885.5	alternative 5' UTR
ENST00000404532.5	alternative 5' UTR
ENST00000438893.2	GENCODE experimental pipeline
ENST00000436994.1	GENCODE experimental pipeline
ENST00000409926.2	GENCODE experimental pipeline
ENST00000633827.1	CAGE supported TSS
ENST00000442565.1	GENCODE experimental pipeline
ENST00000400358.9	MANE_select
ENST00000400358.9	NP_001091967
ENST00000407886.1	NP_001001663
ENST00000637069.1	CAGE supported TSS
ENST00000623239.1	prediction only
ENST00000623980.1	prediction only
ENST00000366110.4	GENCODE experimental pipeline
ENST00000604037.1	GENCODE experimental pipeline
ENST00000215855.7	MANE_select
ENST00000454253.2	GENCODE experimental pipeline
ENST00000651679.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000651629.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000651629.1	alternative 5' UTR
ENST00000398215.3	MANE_select
ENST00000411511.5	GENCODE experimental pipeline
ENST00000468442.1	alternative 5' UTR
ENST00000412773.1	GENCODE experimental pipeline
ENST00000668059.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666865.1	Assembled from SLRseq reads (SRP049776)
ENST00000661676.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000324198.11	MANE_select
ENST00000455558.2	not organism-supported
ENST00000413494.1	GENCODE experimental pipeline
ENST00000418510.1	GENCODE experimental pipeline
ENST00000536101.5	alternative 3' UTR
ENST00000536101.5	non canonical conserved
ENST00000335473.12	MANE_select
ENST00000335473.12	NP_115997.5
ENST00000335473.12	non canonical conserved
ENST00000407587.6	non canonical conserved
ENST00000539302.5	non canonical conserved
ENST00000600211.5	GENCODE experimental pipeline
ENST00000609809.1	nested 454 RNA-Seq supported
ENST00000609823.1	nested 454 RNA-Seq supported
ENST00000607895.1	nested 454 RNA-Seq supported
ENST00000594542.1	nested 454 RNA-Seq supported
ENST00000436423.1	GENCODE experimental pipeline
ENST00000420391.1	GENCODE experimental pipeline
ENST00000652418.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000650717.1	GENCODE experimental pipeline
ENST00000248933.11	MANE_select
ENST00000248933.11	NAGNAG splice site
ENST00000360929.7	NAGNAG splice site
ENST00000629590.2	NAGNAG splice site
ENST00000343706.8	NAGNAG splice site
ENST00000414989.2	GENCODE experimental pipeline
ENST00000450463.1	GENCODE experimental pipeline
ENST00000215906.6	MANE_select
ENST00000398145.7	CAGE supported TSS
ENST00000398145.7	MANE_select
ENST00000398145.7	alternative 5' UTR
ENST00000398145.7	alternative_5'_UTR NP_071364
ENST00000402105.7	NP_690054
ENST00000215917.11	MANE_select
ENST00000407690.6	MANE_select
ENST00000407690.6	alternative 5' UTR
ENST00000407431.5	alternative 5' UTR
ENST00000407148.5	alternative 5' UTR
ENST00000455080.5	alternative 5' UTR
ENST00000418876.5	alternative 5' UTR
ENST00000420242.5	alternative 5' UTR
ENST00000440258.1	alternative 5' UTR
ENST00000338754.9	MANE_select
ENST00000398110.6	alternative 5' UTR
ENST00000403880.5	alternative 5' UTR
ENST00000442495.5	alternative 5' UTR
ENST00000454778.5	alternative 5' UTR
ENST00000440953.5	alternative 5' UTR
ENST00000453117.1	alternative 5' UTR
ENST00000450022.1	alternative 5' UTR
ENST00000395823.2	GENCODE experimental pipeline
ENST00000668614.1	Assembled from SLRseq reads (SRP049776)
ENST00000647684.1	LR annotation
ENST00000647684.1	MANE_select
ENST00000354760.4	MANE_select
ENST00000425548.1	GENCODE experimental pipeline
ENST00000668051.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000421867.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000421867.6	GENCODE experimental pipeline
ENST00000656640.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669142.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660931.1	Assembled from SLRseq reads (SRP049776)
ENST00000436238.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670887.1	Assembled from SLRseq reads (SRP049776)
ENST00000665574.1	Assembled from SLRseq reads (SRP049776)
ENST00000382641.1	GENCODE experimental pipeline
ENST00000651474.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000449017.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653953.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668496.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662474.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664301.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669899.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000434868.1	GENCODE experimental pipeline
ENST00000653531.1	Assembled from SLRseq reads (SRP049776)
ENST00000671424.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658323.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664041.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670559.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664057.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000422915.1	GENCODE experimental pipeline
ENST00000438113.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438113.2	GENCODE experimental pipeline
ENST00000453934.1	GENCODE experimental pipeline
ENST00000658755.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000430468.1	GENCODE experimental pipeline
ENST00000427360.1	GENCODE experimental pipeline
ENST00000444114.5	GENCODE experimental pipeline
ENST00000660027.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659538.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650737.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000449126.1	GENCODE experimental pipeline
ENST00000454387.1	GENCODE experimental pipeline
ENST00000662296.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657960.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665304.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000426467.1	GENCODE experimental pipeline
ENST00000668323.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669277.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413244.1	GENCODE experimental pipeline
ENST00000654206.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440477.1	GENCODE experimental pipeline
ENST00000415655.1	GENCODE experimental pipeline
ENST00000440255.1	GENCODE experimental pipeline
ENST00000422833.1	GENCODE experimental pipeline
ENST00000417957.1	GENCODE experimental pipeline
ENST00000302326.5	MANE_select
ENST00000335272.10	MANE_select
ENST00000662329.1	Assembled from SLRseq reads (SRP049776)
ENST00000417497.6	Assembled from SLRseq reads (SRP049776)
ENST00000434221.6	Assembled from SLRseq reads (SRP049776)
ENST00000424161.6	Assembled from SLRseq reads (SRP049776)
ENST00000454741.5	GENCODE experimental pipeline
ENST00000453632.6	Assembled from SLRseq reads (SRP049776)
ENST00000665376.1	Assembled from SLRseq reads (SRP049776)
ENST00000659843.1	Assembled from SLRseq reads (SRP049776)
ENST00000437713.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662682.1	Assembled from SLRseq reads (SRP049776)
ENST00000655332.1	Assembled from SLRseq reads (SRP049776)
ENST00000665505.1	Assembled from SLRseq reads (SRP049776)
ENST00000454996.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435348.6	Assembled from SLRseq reads (SRP049776)
ENST00000664946.1	Assembled from SLRseq reads (SRP049776)
ENST00000417381.6	Assembled from SLRseq reads (SRP049776)
ENST00000654553.1	Assembled from SLRseq reads (SRP049776)
ENST00000670661.1	Assembled from SLRseq reads (SRP049776)
ENST00000669227.1	Assembled from SLRseq reads (SRP049776)
ENST00000670585.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000662424.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654619.1	Assembled from SLRseq reads (SRP049776)
ENST00000655196.1	Assembled from SLRseq reads (SRP049776)
ENST00000433317.1	not organism-supported
ENST00000665529.1	Assembled from SLRseq reads (SRP049776)
ENST00000663167.1	Assembled from SLRseq reads (SRP049776)
ENST00000654312.1	Assembled from SLRseq reads (SRP049776)
ENST00000490475.1	not organism-supported
ENST00000464581.6	CAGE supported TSS
ENST00000404276.6	CAGE supported TSS
ENST00000404276.6	LR annotation
ENST00000404276.6	MANE_select
ENST00000650281.1	alternative 5' UTR
ENST00000650233.1	alternative 5' UTR
ENST00000398017.3	alternative 5' UTR
ENST00000398017.3	upstream ATG
ENST00000216027.8	MANE_select
ENST00000249064.9	MANE_select
ENST00000344347.5	non canonical other
ENST00000458080.1	GENCODE experimental pipeline
ENST00000447099.1	GENCODE experimental pipeline
ENST00000544604.7	MANE_select
ENST00000402174.5	alternative 5' UTR
ENST00000406323.3	alternative 5' UTR
ENST00000412798.1	GENCODE experimental pipeline
ENST00000400335.9	MANE_select
ENST00000407188.5	non canonical TEC
ENST00000456740.1	GENCODE experimental pipeline
ENST00000334018.11	MANE_select
ENST00000216085.12	MANE_select
ENST00000496342.1	GENCODE experimental pipeline
ENST00000414672.5	alternative 5' UTR
ENST00000406335.1	alternative 5' UTR
ENST00000433125.1	GENCODE experimental pipeline
ENST00000397938.7	MANE_select
ENST00000333395.10	NP_001156759.1
ENST00000416823.1	alternative 5' UTR
ENST00000428622.1	alternative 5' UTR
ENST00000406549.7	NP_001265659
ENST00000621062.4	alternative 5' UTR
ENST00000611648.2	alternative 5' UTR
ENST00000618518.3	alternative 5' UTR
ENST00000216101.7	MANE_select
ENST00000357586.7	CAGE supported TSS
ENST00000357586.7	MANE_select
ENST00000357586.7	NP_001118.2
ENST00000421126.5	alternative 5' UTR
ENST00000461286.3	GENCODE experimental pipeline
ENST00000461286.3	nested 454 RNA-Seq supported
ENST00000419368.1	GENCODE experimental pipeline
ENST00000354373.2	NP_066306
ENST00000310624.7	MANE_select
ENST00000634116.1	CAGE supported TSS
ENST00000490103.6	MANE_select
ENST00000397873.6	alternative 5' UTR
ENST00000440771.5	alternative 5' UTR
ENST00000428374.5	alternative 5' UTR
ENST00000418021.1	alternative 5' UTR
ENST00000411969.1	GENCODE experimental pipeline
ENST00000216121.12	MANE_select
ENST00000338641.10	CAGE supported TSS
ENST00000338641.10	LR annotation
ENST00000338641.10	MANE_select
ENST00000672896.1	CAGE supported TSS
ENST00000672896.1	LR annotation
ENST00000672896.1	alternative 3' UTR
ENST00000334961.11	alternative 3' UTR
ENST00000397789.3	alternative 3' UTR
ENST00000416352.1	GENCODE experimental pipeline
ENST00000420180.1	GENCODE experimental pipeline
ENST00000216144.4	MANE_select
ENST00000344318.4	MANE_select
ENST00000668996.1	Assembled from SLRseq reads (SRP049776)
ENST00000330029.6	MANE_select
ENST00000330029.6	NP_037519
ENST00000401406.3	NP_001003684
ENST00000307790.8	MANE_select
ENST00000397771.6	alternative 5' UTR
ENST00000431535.5	alternative 5' UTR
ENST00000401950.7	MANE_select
ENST00000445401.5	alternative 5' UTR
ENST00000624945.1	prediction only
ENST00000429350.5	GENCODE experimental pipeline
ENST00000453616.1	GENCODE experimental pipeline
ENST00000336726.11	MANE_select
ENST00000336726.11	alternative 5' UTR
ENST00000423857.1	GENCODE experimental pipeline
ENST00000451219.1	GENCODE experimental pipeline
ENST00000432360.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000432360.2	GENCODE experimental pipeline
ENST00000447565.1	GENCODE experimental pipeline
ENST00000249075.4	MANE_select
ENST00000608354.1	CAGE supported TSS
ENST00000215781.3	MANE_select
ENST00000407689.8	MANE_select
ENST00000330168.9	NAGNAG splice site
ENST00000447976.1	alternative 3' UTR
ENST00000215790.12	MANE_select
ENST00000215793.13	MANE_select
ENST00000444440.1	not organism-supported
ENST00000447376.1	not organism-supported
ENST00000405659.5	LOC550631
ENST00000382363.8	MANE_select
ENST00000615189.5	MANE_select
ENST00000266263.10	MANE_select
ENST00000426397.1	GENCODE experimental pipeline
ENST00000215812.9	MANE_select
ENST00000435069.1	not organism-supported
ENST00000610156.1	nested 454 RNA-Seq supported
ENST00000442126.1	GENCODE experimental pipeline
ENST00000453285.1	GENCODE experimental pipeline
ENST00000255858.12	MANE_select
ENST00000402034.6	GENCODE experimental pipeline
ENST00000402034.6	not best-in-genome evidence
ENST00000448467.1	GENCODE experimental pipeline
ENST00000406955.5	alternative 5' UTR
ENST00000402321.5	alternative 5' UTR
ENST00000402369.5	alternative 5' UTR
ENST00000406361.6	MANE_select
ENST00000406361.6	alternative 5' UTR
ENST00000441967.5	alternative 3' UTR
ENST00000437282.5	alternative 5' UTR
ENST00000423299.5	alternative 5' UTR
ENST00000423371.5	alternative 5' UTR
ENST00000428682.5	alternative 5' UTR
ENST00000426220.5	alternative 5' UTR
ENST00000447224.5	alternative 5' UTR
ENST00000411821.5	alternative 5' UTR
ENST00000354694.12	MANE_select
ENST00000402281.5	alternative 5' UTR
ENST00000432130.1	GENCODE experimental pipeline
ENST00000215838.8	MANE_select
ENST00000343605.5	MANE_select
ENST00000430175.5	alternative 3' UTR
ENST00000404885.5	alternative 3' UTR
ENST00000407308.1	alternative 5' UTR
ENST00000377087.3	not organism-supported
ENST00000412865.1	alternative 3' UTR
ENST00000334679.4	MANE_select
ENST00000342474.4	alternative 5' UTR
ENST00000442752.1	alternative 5' UTR
ENST00000332585.11	MANE_select
ENST00000424380.1	GENCODE experimental pipeline
ENST00000668983.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655707.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000397641.8	CAGE supported TSS
ENST00000397641.8	MANE_select
ENST00000675402.1	align_id:1342672|asmbl_62575
ENST00000675798.1	align_id:1342669|asmbl_62572
ENST00000674576.1	align_id:3673547|asmbl_163712
ENST00000675601.1	align_id:3673528|asmbl_163693
ENST00000674585.1	align_id:1342675|asmbl_62578
ENST00000675570.1	align_id:1342674|asmbl_62577
ENST00000623789.1	prediction only
ENST00000422839.5	alternative 5' UTR
ENST00000475548.5	NMD likely if extended
ENST00000333137.12	MANE_select
ENST00000624247.1	NAGNAG splice site
ENST00000402395.5	alternative 5' UTR
ENST00000400299.6	MANE_select
ENST00000420779.2	GENCODE experimental pipeline
ENST00000331075.10	MANE_select
ENST00000405300.5	alternative 5' UTR
ENST00000215885.4	MANE_select
ENST00000397595.2	GENCODE experimental pipeline
ENST00000326132.11	MANE_select
ENST00000331728.9	MANE_select
ENST00000215912.10	MANE_select
ENST00000440456.5	GENCODE experimental pipeline
ENST00000266269.10	MANE_select
ENST00000504184.3	CAGE supported TSS
ENST00000331457.9	MANE_select
ENST00000486584.1	NMD likely if extended
ENST00000441289.1	GENCODE experimental pipeline
ENST00000330125.10	MANE_select
ENST00000418321.1	GENCODE experimental pipeline
ENST00000655902.1	Assembled from RACEseq reads
ENST00000432498.5	GENCODE experimental pipeline
ENST00000432498.5	NP_055590.2
ENST00000400288.7	MANE_select
ENST00000400288.7	NP_001007468.1
ENST00000450787.1	GENCODE experimental pipeline
ENST00000486708.1	novel transcript
ENST00000452250.5	novel transcript
ENST00000467357.1	putative novel transcript
ENST00000417682.6	GENCODE experimental pipeline
ENST00000425671.1	novel transcript
ENST00000488883.5	novel transcript
ENST00000463436.1	putative novel transcript
ENST00000495107.1	novel transcript
ENST00000474741.5	novel transcript
ENST00000476577.5	novel transcript
ENST00000464333.5	novel transcript
ENST00000357852.3	novel transcript
ENST00000665497.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000444403.1	GENCODE experimental pipeline
ENST00000416920.1	GENCODE experimental pipeline
ENST00000445477.1	GENCODE experimental pipeline
ENST00000327423.11	MANE_select
ENST00000431684.1	novel transcript
ENST00000492705.1	putative novel transcript
ENST00000461722.1	novel transcript
ENST00000412743.1	novel transcript
ENST00000644331.1	alternative 5' UTR
ENST00000646755.1	alternative 5' UTR
ENST00000382112.8	alternative 5' UTR
ENST00000400248.7	alternative 5' UTR
ENST00000642771.1	alternative 3' UTR
ENST00000642771.1	alternative 5' UTR
ENST00000643751.2	Extended 5' and 3' ends using assembled from SLRseq reads (ENA:SRP049776)
ENST00000646969.1	alternative 5' UTR
ENST00000642696.1	NP_055477.1
ENST00000642696.1	Supported by human Swiss-Prot Isoform 1 (O75140-1.2; 1572 aa)
ENST00000647343.1	alternative 5' UTR
ENST00000651528.2	LR annotation
ENST00000651528.2	MANE_select
ENST00000645015.1	alternative 5' UTR
ENST00000473802.1	CAGE supported TSS
ENST00000494060.1	not organism-supported
ENST00000429025.1	GENCODE experimental pipeline
ENST00000454534.1	GENCODE experimental pipeline
ENST00000654264.1	Assembled from SLRseq reads (SRP049776)
ENST00000667186.2	Merged with: Assembled from SLRseq reads (SRP049776)
ENST00000667186.2	Merged with: TAGENE_transcript
ENST00000670472.1	Assembled from SLRseq reads (SRP049776)
ENST00000248975.6	MANE_select
ENST00000430449.1	GENCODE experimental pipeline
ENST00000416995.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000416995.2	GENCODE experimental pipeline
ENST00000658411.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423610.1	GENCODE experimental pipeline
ENST00000266088.9	MANE_select
ENST00000423412.1	GENCODE experimental pipeline
ENST00000436294.1	GENCODE experimental pipeline
ENST00000382097.4	MANE_select
ENST00000467813.1	novel transcript
ENST00000426354.1	GENCODE experimental pipeline
ENST00000523725.1	IGLC/OR22-1*01
ENST00000523725.1	P
ENST00000452181.2	GENCODE experimental pipeline
ENST00000434942.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000266086.6	MANE_select
ENST00000397477.2	GENCODE experimental pipeline
ENST00000667569.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668765.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000446543.1	GENCODE experimental pipeline
ENST00000249007.4	MANE_select
ENST00000605398.1	IGLC/OR22-2*01
ENST00000605398.1	P
ENST00000400234.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000382084.9	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658273.1	Assembled from RACEseq reads
ENST00000659039.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659039.1	Assembled from SLRseq reads (SRP049776)
ENST00000655996.1	Assembled from SLRseq reads (SRP049776)
ENST00000657380.1	Assembled from SLRseq reads (SRP049776)
ENST00000657810.1	Assembled from SLRseq reads (SRP049776)
ENST00000577714.1	alternative 5' UTR
ENST00000420171.1	LOC339666
ENST00000430579.1	IGLV(IV)/OR22-2*01
ENST00000430579.1	P
ENST00000444848.1	GENCODE experimental pipeline
ENST00000216038.6	MANE_select
ENST00000266087.12	MANE_select
ENST00000358763.7	MANE_select
ENST00000428201.1	GENCODE experimental pipeline
ENST00000444982.1	GENCODE experimental pipeline
ENST00000266085.7	MANE_select
ENST00000446798.1	GENCODE experimental pipeline
ENST00000653890.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452505.1	GENCODE experimental pipeline
ENST00000670696.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659583.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000447396.1	GENCODE experimental pipeline
ENST00000676217.1	align_id:3674124|asmbl_164289
ENST00000674562.1	align_id:3674125|asmbl_164290
ENST00000421232.1	CAGE supported TSS
ENST00000397394.8	MANE_select
ENST00000397394.8	align_id:3674129|asmbl_164294
ENST00000674816.1	align_id:3674136|asmbl_164301
ENST00000674780.1	CAGE supported TSS
ENST00000674780.1	align_id:1342779|asmbl_62682
ENST00000674780.1	pacbio_cs_merged_multi
ENST00000674708.1	align_id:3674135|asmbl_164300
ENST00000674999.1	align_id:3674134|asmbl_164299
ENST00000675382.1	align_id:3674140|asmbl_164305
ENST00000676031.1	align_id:3674139|asmbl_164304
ENST00000674668.1	align_id:3674137|asmbl_164302
ENST00000676132.1	align_id:3674130|asmbl_164295
ENST00000675416.1	align_id:3674133|asmbl_164298
ENST00000676370.1	align_id:3674127|asmbl_164292
ENST00000676070.1	align_id:3674128|asmbl_164293
ENST00000674543.1	align_id:3674143|asmbl_164308
ENST00000413114.6	align_id:3674132|asmbl_164297
ENST00000413114.6	alternative 5' UTR
ENST00000430220.7	alternative 5' UTR
ENST00000423375.2	alternative 5' UTR
ENST00000432776.6	alternative 5' UTR
ENST00000434071.6	alternative 5' UTR
ENST00000434741.1	GENCODE experimental pipeline
ENST00000453924.1	GENCODE experimental pipeline
ENST00000445391.1	GENCODE experimental pipeline
ENST00000448275.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664675.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000424291.5	GENCODE experimental pipeline
ENST00000663088.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661135.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655904.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665701.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652942.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664480.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669802.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656244.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667570.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658589.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658699.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664743.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656434.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655455.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654009.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664028.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661903.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658014.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665392.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669488.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663820.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658055.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670742.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665458.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668175.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668901.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000412218.1	GENCODE experimental pipeline
ENST00000671554.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653369.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659067.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661800.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670329.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657115.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661218.1	Assembled from SLRseq reads (SRP049776)
ENST00000658408.1	Assembled from SLRseq reads (SRP049776)
ENST00000450365.1	GENCODE experimental pipeline
ENST00000457251.1	GENCODE experimental pipeline
ENST00000624442.1	prediction only
ENST00000423712.1	GENCODE experimental pipeline
ENST00000440858.1	GENCODE experimental pipeline
ENST00000668433.1	Assembled from SLRseq reads (SRP049776)
ENST00000665218.1	Assembled from SLRseq reads (SRP049776)
ENST00000404699.7	MANE_select
ENST00000404699.7	alternative 5' UTR
ENST00000423311.1	GENCODE experimental pipeline
ENST00000414048.1	GENCODE experimental pipeline
ENST00000420166.5	alternative 5' UTR
ENST00000216106.6	MANE_select
ENST00000449058.7	MANE_select
ENST00000412893.5	alternative 5' UTR
ENST00000216117.9	MANE_select
ENST00000216122.9	MANE_select
ENST00000216127.5	MANE_select
ENST00000397326.7	MANE_select
ENST00000406324.5	alternative 5' UTR
ENST00000443033.5	alternative 5' UTR
ENST00000419229.1	alternative 5' UTR
ENST00000409652.5	MANE_select
ENST00000417782.1	GENCODE experimental pipeline
ENST00000249044.2	MANE_select
ENST00000438146.7	non canonical conserved
ENST00000414461.6	NP_001076046.1
ENST00000414461.6	non canonical conserved
ENST00000449924.6	NP_001026865.1
ENST00000449924.6	non canonical conserved
ENST00000436210.1	GENCODE experimental pipeline
ENST00000625157.1	prediction only
ENST00000397287.6	alternative 5' UTR
ENST00000425366.1	GENCODE experimental pipeline
ENST00000437339.1	GENCODE experimental pipeline
ENST00000414147.1	GENCODE experimental pipeline
ENST00000454926.1	GENCODE experimental pipeline
ENST00000439552.1	GENCODE experimental pipeline
ENST00000426108.1	GENCODE experimental pipeline
ENST00000332987.5	alternative 5' UTR
ENST00000457630.6	alternative 5' UTR
ENST00000419360.5	alternative 5' UTR
ENST00000436763.1	alternative 5' UTR
ENST00000358502.10	MANE_select
ENST00000358502.10	alternative 5' UTR
ENST00000529194.5	alternative 5' UTR
ENST00000454728.5	alternative 5' UTR
ENST00000397278.8	MANE_select
ENST00000216181.11	GENCODE experimental pipeline
ENST00000216181.11	LR annotation
ENST00000216181.11	MANE_select
ENST00000663925.1	Assembled from SLRseq reads (SRP049776)
ENST00000424761.1	GENCODE experimental pipeline
ENST00000413110.1	GENCODE experimental pipeline
ENST00000442579.1	GENCODE experimental pipeline
ENST00000416967.1	FLJ26677
ENST00000216185.7	MANE_select
ENST00000397224.9	MANE_select
ENST00000366463.6	FLJ33734
ENST00000216190.13	MANE_select
ENST00000433970.1	GENCODE experimental pipeline
ENST00000300105.7	MANE_select
ENST00000430281.1	FLJ41638
ENST00000430281.1	GENCODE experimental pipeline
ENST00000656882.1	Assembled from SLRseq reads (SRP049776)
ENST00000433985.7	MANE_select
ENST00000433985.7	genebuild_only_MANE
ENST00000430701.5	alternative 5' UTR
ENST00000667675.1	Assembled from SLRseq reads (SRP049776)
ENST00000417718.7	MANE_select
ENST00000417718.7	alternative 5' UTR
ENST00000443735.1	alternative 5' UTR
ENST00000417792.1	GENCODE experimental pipeline
ENST00000619915.1	GENCODE experimental pipeline
ENST00000397147.7	LR annotation
ENST00000248899.11	LR annotation
ENST00000248899.11	MANE_select
ENST00000650827.1	alternative 5' UTR
ENST00000650698.1	CAGE supported TSS
ENST00000650698.1	alternative 5' UTR
ENST00000403662.8	MANE_select
ENST00000400221.1	FLJ26869
ENST00000400221.1	GENCODE experimental pipeline
ENST00000405091.6	alternative 5' UTR
ENST00000381821.2	MANE_select
ENST00000403892.7	FLJ34555
ENST00000249042.8	MANE_select
ENST00000401419.7	alternative 5' UTR
ENST00000404802.7	alternative 5' UTR
ENST00000429360.6	MANE_select
ENST00000341116.7	alternative 5' UTR
ENST00000397225.2	FLJ31171
ENST00000397225.2	alternative 5' UTR
ENST00000666567.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000346753.9	upstream ATG
ENST00000406856.7	CAGE supported TSS
ENST00000406856.7	LR annotation
ENST00000676104.1	CAGE supported TSS
ENST00000676104.1	MANE_select
ENST00000676104.1	alternative 5' UTR
ENST00000423761.1	alternative 5' UTR
ENST00000414203.2	GENCODE experimental pipeline
ENST00000216223.10	MANE_select
ENST00000453962.5	alternative 5' UTR
ENST00000429622.5	alternative 5' UTR
ENST00000445595.1	alternative 5' UTR
ENST00000419128.1	GENCODE experimental pipeline
ENST00000337843.7	MANE_select
ENST00000470655.5	FLJ46246
ENST00000610913.2	MANE_select
ENST00000617123.1	alternative 5' UTR
ENST00000436709.1	GENCODE experimental pipeline
ENST00000249071.11	MANE_select
ENST00000441619.5	alternative 5' UTR
ENST00000457992.5	alternative 5' UTR
ENST00000248901.11	MANE_select
ENST00000430883.5	FLJ30913
ENST00000445088.1	FLJ40468
ENST00000445088.1	GENCODE experimental pipeline
ENST00000666674.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000402918.7	MANE_select
ENST00000356998.8	MANE_select
ENST00000251973.10	MANE_select
ENST00000251973.10	alternative 5' UTR
ENST00000406271.7	FLJ90425
ENST00000428838.1	GENCODE experimental pipeline
ENST00000430687.1	alternative 5' UTR
ENST00000249014.5	MANE_select
ENST00000415670.1	alternative 5' UTR
ENST00000434728.1	alternative 5' UTR
ENST00000215886.6	MANE_select
ENST00000416480.1	alternative 5' UTR
ENST00000381756.9	non canonical TEC
ENST00000343632.9	MANE_select
ENST00000325180.12	NP_001001560.1
ENST00000406772.5	FLJ16562
ENST00000406772.5	non-canonical splice donor between exon 1 and 2
ENST00000475445.1	FLJ39951
ENST00000417536.5	FLJ42389
ENST00000649765.2	CAGE supported TSS
ENST00000649765.2	LR annotation
ENST00000649765.2	MANE_select
ENST00000644149.1	NMD likely if extended
ENST00000469947.5	FLJ44592
ENST00000456099.1	FLJ40472
ENST00000456099.1	GENCODE experimental pipeline
ENST00000215904.7	MANE_select
ENST00000403251.1	FLJ32703
ENST00000215909.10	MANE_select
ENST00000493862.5	alternative 5' UTR
ENST00000359114.9	MANE_select
ENST00000644935.1	LR annotation
ENST00000644935.1	MANE_select
ENST00000403663.6	NP_008963.3
ENST00000403663.6	isoform 1
ENST00000407319.7	LR annotation
ENST00000415371.1	NMD likely if extended
ENST00000248924.11	MANE_select
ENST00000249041.3	MANE_select
ENST00000215941.9	MANE_select
ENST00000498417.5	FLJ45678
ENST00000381683.10	NP_001229852.1
ENST00000652021.1	MANE_select
ENST00000652021.1	genebuild_only_MANE
ENST00000215957.10	MANE_select
ENST00000403305.6	MANE_select
ENST00000249079.6	FLJ32787
ENST00000249079.6	alternative 5' UTR
ENST00000418863.5	alternative 5' UTR
ENST00000422191.1	alternative 5' UTR
ENST00000442738.7	MANE_select
ENST00000396884.8	CAGE supported TSS
ENST00000396884.8	LR annotation
ENST00000396884.8	MANE_select
ENST00000396884.8	alternative 5' UTR
ENST00000427770.1	alternative 5' UTR
ENST00000470555.1	not organism-supported
ENST00000445628.5	alternative 5' UTR
ENST00000424694.5	alternative 5' UTR
ENST00000356976.8	MANE_select
ENST00000356976.8	alternative 5' UTR
ENST00000435166.1	alternative 5' UTR
ENST00000445483.1	GENCODE experimental pipeline
ENST00000681075.1	alternative 5' UTR
ENST00000681084.1	ENCT00000282625.1:coding_mRNA
ENST00000332536.10	ENCT00000282627.1:coding_mRNA
ENST00000381669.8	MANE_select
ENST00000679603.1	HBMT00000952223.1:coding_mRNA
ENST00000679603.1	fantom_cat
ENST00000680818.1	ENCT00000282633.1:coding_mRNA
ENST00000332509.8	CAGE supported TSS
ENST00000332509.8	LR annotation
ENST00000332509.8	MANE_select
ENST00000660610.1	alternative 5' UTR
ENST00000667521.1	alternative 5' UTR
ENST00000668949.1	alternative 5' UTR
ENST00000668208.1	NMD likely if extended
ENST00000447598.6	NMD likely if extended
ENST00000435484.5	NMD likely if extended
ENST00000417303.6	NMD likely if extended
ENST00000455341.2	alternative 5' UTR
ENST00000594306.1	alternative 5' UTR
ENST00000338483.7	MANE_select
ENST00000417948.5	alternative 5' UTR
ENST00000407965.1	alternative 5' UTR
ENST00000361906.8	MANE_select
ENST00000361906.8	alternative 5' UTR
ENST00000361684.8	CCDS13969.2
ENST00000420172.1	GENCODE experimental pipeline
ENST00000396832.6	MANE_select
ENST00000396832.6	genebuild_only_MANE
ENST00000359867.7	alternative 5' UTR
ENST00000366216.6	alternative 3' UTR
ENST00000430335.1	alternative 5' UTR
ENST00000454123.1	GENCODE experimental pipeline
ENST00000652019.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000433230.1	GENCODE experimental pipeline
ENST00000303592.3	MANE_select
ENST00000662373.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000216014.9	MANE_select
ENST00000403230.3	MANE_select
ENST00000403230.3	NP_006377.2
ENST00000396821.8	NP_001091974.1
ENST00000216024.7	MANE_select
ENST00000439567.5	alternative 5' UTR
ENST00000415483.1	alternative 5' UTR
ENST00000535113.6	non canonical TEC
ENST00000535113.6	non canonical U12
ENST00000540952.6	non canonical U12
ENST00000355830.11	GENCODE experimental pipeline
ENST00000355830.11	non canonical U12
ENST00000544346.5	non canonical U12
ENST00000541689.6	non canonical U12
ENST00000411557.5	alternative 5' UTR
ENST00000396811.6	alternative 5' UTR
ENST00000416285.5	alternative 5' UTR
ENST00000423346.1	GENCODE experimental pipeline
ENST00000431924.2	GENCODE experimental pipeline
ENST00000653554.1	Assembled from SLRseq reads (SRP049776)
ENST00000422408.2	extended using 454
ENST00000666365.1	Assembled from SLRseq reads (SRP049776)
ENST00000656432.1	Assembled from SLRseq reads (SRP049776)
ENST00000666731.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000216034.6	MANE_select
ENST00000427389.5	alternative 5' UTR
ENST00000412832.1	alternative 5' UTR
ENST00000417712.1	alternative 5' UTR
ENST00000456626.1	alternative 5' UTR
ENST00000216044.10	MANE_select
ENST00000488787.5	alternative 5' UTR
ENST00000470836.1	alternative 5' UTR
ENST00000418695.1	GENCODE experimental pipeline
ENST00000420118.1	GENCODE experimental pipeline
ENST00000406622.5	alternative 5' UTR
ENST00000438058.5	alternative 5' UTR
ENST00000456894.5	alternative 5' UTR
ENST00000420859.5	alternative 5' UTR
ENST00000452294.5	alternative 5' UTR
ENST00000452294.5	upstream_ATG-35
ENST00000433561.5	alternative 5' UTR
ENST00000417332.5	alternative 5' UTR
ENST00000439339.1	alternative 5' UTR
ENST00000418803.1	GENCODE experimental pipeline
ENST00000216068.9	MANE_select
ENST00000333039.4	MANE_select
ENST00000407418.8	MANE_select
ENST00000656940.1	Assembled from SLRseq reads (SRP049776)
ENST00000450216.1	GENCODE experimental pipeline
ENST00000249116.7	MANE_select
ENST00000249116.7	genebuild_only_MANE
ENST00000333467.4	LR annotation
ENST00000333467.4	MANE_select
ENST00000361441.5	MANE_select
ENST00000216099.13	MANE_select
ENST00000308521.10	MANE_select
ENST00000407997.4	MANE_select
ENST00000442487.8	MANE_select
ENST00000216133.10	MANE_select
ENST00000414780.1	GENCODE experimental pipeline
ENST00000441207.1	GENCODE experimental pipeline
ENST00000331163.11	MANE_select
ENST00000381551.8	NP_148937.1
ENST00000642075.1	CAGE supported TSS
ENST00000216146.9	MANE_select
ENST00000328933.10	MANE_select
ENST00000216160.11	MANE_select
ENST00000341184.7	MANE_select
ENST00000429402.1	alternative 5' UTR
ENST00000432239.1	GENCODE experimental pipeline
ENST00000404569.5	alternative 5' UTR
ENST00000434364.5	alternative 5' UTR
ENST00000404241.6	CAGE supported TSS
ENST00000674920.2	CAGE supported TSS
ENST00000337304.2	alternative 5' UTR
ENST00000334678.8	MANE_select
ENST00000402142.4	GENCODE experimental pipeline
ENST00000402142.4	MANE_select
ENST00000325157.7	MANE_select
ENST00000435169.1	GENCODE experimental pipeline
ENST00000344138.9	MANE_select
ENST00000420971.5	alternative 5' UTR
ENST00000407075.3	alternative 5' UTR
ENST00000424496.2	GENCODE experimental pipeline
ENST00000333407.11	MANE_select
ENST00000333407.11	NP_612444
ENST00000473717.1	Uporf in exon 1
ENST00000441751.5	alternative 5' UTR
ENST00000454349.7	MANE_select
ENST00000454349.7	genebuild_only_MANE
ENST00000449200.1	GENCODE experimental pipeline
ENST00000623063.3	MANE_select
ENST00000248929.14	MANE_select
ENST00000414261.1	GENCODE experimental pipeline
ENST00000608572.1	nested 454 RNA-Seq supported
ENST00000407029.7	CAGE supported TSS
ENST00000407029.7	alternative 5' UTR
ENST00000652095.2	CAGE supported TSS
ENST00000652095.2	LR annotation
ENST00000355630.10	CAGE supported TSS
ENST00000355630.10	LR annotation
ENST00000355630.10	MANE_select
ENST00000402630.5	CAGE supported TSS
ENST00000463769.7	alternative 5' UTR
ENST00000417123.1	GENCODE experimental pipeline
ENST00000438116.2	GENCODE experimental pipeline
ENST00000442317.2	GENCODE experimental pipeline
ENST00000435456.7	MANE_select
ENST00000424746.1	GENCODE experimental pipeline
ENST00000216218.8	MANE_select
ENST00000357137.9	MANE_select
ENST00000307221.5	MANE_select
ENST00000216225.9	MANE_select
ENST00000467617.1	FLJ33445
ENST00000418783.1	GENCODE experimental pipeline
ENST00000423293.1	GENCODE experimental pipeline
ENST00000263253.9	MANE_select
ENST00000415054.1	GENCODE experimental pipeline
ENST00000452297.1	GENCODE experimental pipeline
ENST00000481902.5	FLJ39733
ENST00000216237.10	MANE_select
ENST00000658453.1	Assembled from SLRseq reads (SRP049776)
ENST00000658453.1	GENCODE experimental pipeline
ENST00000441316.2	Assembled from SLRseq reads (SRP049776)
ENST00000657161.1	Assembled from SLRseq reads (SRP049776)
ENST00000216241.14	MANE_select
ENST00000455425.1	GENCODE experimental pipeline
ENST00000356244.8	MANE_select
ENST00000405486.5	alternative 5' UTR
ENST00000455915.6	alternative 5' UTR
ENST00000352645.5	MANE_select
ENST00000266304.9	MANE_select
ENST00000327492.4	MANE_select
ENST00000434408.1	alternative 5' UTR
ENST00000676748.1	CAGE supported TSS
ENST00000216254.9	MANE_select
ENST00000216252.4	MANE_select
ENST00000355209.9	MANE_select
ENST00000664614.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000306149.12	MANE_select
ENST00000216259.8	MANE_select
ENST00000263256.7	MANE_select
ENST00000360079.8	MANE_select
ENST00000359308.8	alternative 5' UTR
ENST00000401959.6	CAGE supported TSS
ENST00000401959.6	LR annotation
ENST00000401959.6	MANE_select
ENST00000648350.1	CAGE supported TSS
ENST00000402458.1	CAGE supported TSS
ENST00000668666.1	FLJ23584
ENST00000668666.1	GENCODE experimental pipeline
ENST00000401548.8	GENCODE experimental pipeline
ENST00000401548.8	MANE_select
ENST00000401548.8	MGC40042
ENST00000651135.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000448085.1	GENCODE experimental pipeline
ENST00000255784.6	GENCODE experimental pipeline
ENST00000255784.6	MANE_select
ENST00000333487.2	FLJ39598
ENST00000333487.2	GENCODE experimental pipeline
ENST00000361204.9	MANE_select
ENST00000491541.1	DKFZp434N1610
ENST00000291232.5	MANE_select
ENST00000215980.10	MANE_select
ENST00000381348.4	GENCODE experimental pipeline
ENST00000644076.1	CAGE supported TSS
ENST00000396426.7	NP_663786
ENST00000396425.7	NP_061979
ENST00000424613.1	GENCODE experimental pipeline
ENST00000329620.9	FLJ46259
ENST00000436265.5	FLJ26145
ENST00000328823.13	MANE_select
ENST00000652665.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000450250.1	GENCODE experimental pipeline
ENST00000396398.8	MANE_select
ENST00000396398.8	alternative 5' UTR
ENST00000403363.5	alternative 5' UTR
ENST00000662963.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000321753.8	MANE_select
ENST00000419475.1	alternative 5' UTR
ENST00000331479.4	MANE_select
ENST00000498737.8	MANE_select
ENST00000498737.8	upstream ATG
ENST00000396387.2	GENCODE experimental pipeline
ENST00000645361.2	CAGE supported TSS
ENST00000645361.2	LR annotation
ENST00000645361.2	MANE_select
ENST00000428786.1	GENCODE experimental pipeline
ENST00000651010.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000677622.1	MANE_select
ENST00000677622.1	alternative 5' UTR
ENST00000675876.1	alternative 5' UTR
ENST00000515426.1	alternative 5' UTR
ENST00000420096.2	GENCODE experimental pipeline
ENST00000653912.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000412060.1	GENCODE experimental pipeline
ENST00000669665.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000329021.10	MANE_select
ENST00000428765.1	GENCODE experimental pipeline
ENST00000652221.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000323013.7	CGI-96 protein
ENST00000323013.7	MANE_select
ENST00000527167.5	non canonical TEC
ENST00000327678.10	MANE_select
ENST00000407614.8	non canonical TEC
ENST00000357802.6	FLJ40882
ENST00000357802.6	GENCODE experimental pipeline
ENST00000252115.10	MANE_select
ENST00000352397.10	MANE_select
ENST00000505920.1	MANE_select
ENST00000401850.5	alternative 5' UTR
ENST00000642412.2	LR annotation
ENST00000642412.2	MANE_select
ENST00000381278.4	alternative 5' UTR
ENST00000426545.1	GENCODE experimental pipeline
ENST00000263245.10	MANE_select
ENST00000263246.8	MANE_select
ENST00000403744.7	alternative 5' UTR
ENST00000402229.5	alternative 5' UTR
ENST00000423154.1	GENCODE experimental pipeline
ENST00000443063.1	GENCODE experimental pipeline
ENST00000266254.12	MANE_select
ENST00000446663.1	GENCODE experimental pipeline
ENST00000216115.3	MANE_select
ENST00000290429.11	MANE_select
ENST00000337554.8	MANE_select
ENST00000428336.5	alternative 5' UTR
ENST00000329563.8	alternative 5' UTR
ENST00000216129.7	MANE_select
ENST00000494035.1	CAGE supported TSS
ENST00000360835.9	MANE_select
ENST00000419643.1	GENCODE experimental pipeline
ENST00000458463.1	GENCODE experimental pipeline
ENST00000450750.1	GENCODE experimental pipeline
ENST00000443721.2	MANE_select
ENST00000443721.2	genebuild_only_MANE
ENST00000667077.1	Assembled from SLRseq reads (SRP049776)
ENST00000431327.4	FLJ33524
ENST00000431327.4	GENCODE experimental pipeline
ENST00000656483.1	Assembled from SLRseq reads (SRP049776)
ENST00000262726.12	MANE_select
ENST00000468552.1	KIAA1672
ENST00000476875.1	GENCODE experimental pipeline
ENST00000330884.9	MANE_select
ENST00000216180.8	MANE_select
ENST00000350028.5	MANE_select
ENST00000474323.5	FLJ39696
ENST00000494795.1	FLJ33963
ENST00000430869.2	GENCODE experimental pipeline
ENST00000338758.12	MANE_select
ENST00000477795.1	GENCODE experimental pipeline
ENST00000444313.8	MANE_select
ENST00000416291.5	alternative 5' UTR
ENST00000417767.1	alternative 5' UTR
ENST00000624215.1	prediction only
ENST00000381176.5	MANE_select
ENST00000406912.1	GENCODE experimental pipeline
ENST00000434327.1	GENCODE experimental pipeline
ENST00000415702.1	GENCODE experimental pipeline
ENST00000423587.1	GENCODE experimental pipeline
ENST00000341255.4	MANE_select
ENST00000435622.1	GENCODE experimental pipeline
ENST00000657777.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666755.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000443783.1	GENCODE experimental pipeline
ENST00000454525.1	GENCODE experimental pipeline
ENST00000432186.5	alternative 5' UTR
ENST00000006251.11	NP_056181.2
ENST00000336985.11	MANE_select
ENST00000336985.11	NP_851850.1
ENST00000457960.5	alternative 5' UTR
ENST00000475850.1	FLJ32225
ENST00000389774.6	NP_001017526
ENST00000460809.5	FLJ12243
ENST00000356099.11	MANE_select
ENST00000356099.11	NP_851852.2
ENST00000396119.6	alternative 5' UTR
ENST00000412433.5	alternative 5' UTR
ENST00000313237.10	MANE_select
ENST00000313237.10	NP_612424.1
ENST00000456225.1	GENCODE experimental pipeline
ENST00000665704.1	Assembled from SLRseq reads (SRP049776)
ENST00000609284.2	Assembled from SLRseq reads (SRP049776)
ENST00000347635.9	MANE_select
ENST00000407019.6	NP_705931
ENST00000424634.5	alternative 5' UTR
ENST00000417702.5	alternative 5' UTR
ENST00000445721.5	alternative 5' UTR
ENST00000396096.6	NP_705931 alternative_5'_UTR
ENST00000432340.1	alternative 5' UTR
ENST00000336156.10	MANE_select
ENST00000336156.10	NP_001009880.1
ENST00000251993.11	NP_056079.1
ENST00000445867.1	GENCODE experimental pipeline
ENST00000216211.9	MANE_select
ENST00000216214.7	NP_001098065
ENST00000441876.7	MANE_select
ENST00000441876.7	alternative 5' UTR
ENST00000427777.1	alternative 5' UTR
ENST00000357450.9	MANE_select
ENST00000357450.9	NP_683515.3
ENST00000614167.2	MANE_select
ENST00000454439.1	GENCODE experimental pipeline
ENST00000262722.11	NP_001987.2
ENST00000327858.11	MANE_select
ENST00000327858.11	NP_006477
ENST00000442170.6	NP_006476.2
ENST00000422971.1	GENCODE experimental pipeline
ENST00000623075.1	prediction only
ENST00000252934.10	MANE_select
ENST00000493643.3	GENCODE experimental pipeline
ENST00000438230.1	GENCODE experimental pipeline
ENST00000623717.1	prediction only
ENST00000451118.1	GENCODE experimental pipeline
ENST00000650444.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000339464.9	MANE_select
ENST00000608290.1	CAGE supported TSS
ENST00000435439.5	FLJ13362
ENST00000360737.4	FLJ27365
ENST00000439423.1	GENCODE experimental pipeline
ENST00000412643.1	GENCODE experimental pipeline
ENST00000314567.8	GENCODE experimental pipeline
ENST00000314567.8	MANE_select
ENST00000253255.7	MANE_select
ENST00000381031.8	FLJ20699
ENST00000381031.8	GENCODE experimental pipeline
ENST00000381031.8	MANE_select
ENST00000454366.2	MANE_select
ENST00000454366.2	NP_057510.3
ENST00000645190.1	LR annotation
ENST00000645190.1	MANE_select
ENST00000642923.1	CAGE supported TSS
ENST00000643137.1	CAGE supported TSS
ENST00000674500.2	CAGE supported TSS
ENST00000674500.2	MANE_select
ENST00000468025.1	CAGE supported TSS
ENST00000454637.2	confirm experimentally
ENST00000447383.1	GENCODE experimental pipeline
ENST00000426112.1	FLJ34883
ENST00000426112.1	GENCODE experimental pipeline
ENST00000406902.6	MANE_select
ENST00000216264.13	MANE_select
ENST00000337137.9	FLJ20844
ENST00000337137.9	MANE_select
ENST00000441162.5	FLJ43717
ENST00000639527.1	LOC100128818
ENST00000434707.1	GENCODE experimental pipeline
ENST00000434707.1	QC splicing correct
ENST00000434707.1	non canonical polymorphism
ENST00000405369.3	GENCODE experimental pipeline
ENST00000669762.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000380990.5	GENCODE experimental pipeline
ENST00000660125.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650947.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664761.1	Assembled from SLRseq reads (SRP049776)
ENST00000665418.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000423737.5	FLJ35788
ENST00000423737.5	GENCODE experimental pipeline
ENST00000652702.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000652030.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652206.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651948.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670853.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651924.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670886.1	Assembled from SLRseq reads (SRP049776)
ENST00000651938.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000449941.2	GENCODE experimental pipeline
ENST00000623760.1	prediction only
ENST00000457518.1	GENCODE experimental pipeline
ENST00000624219.1	prediction only
ENST00000414483.1	GENCODE experimental pipeline
ENST00000446364.1	GENCODE experimental pipeline
ENST00000648313.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000648629.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000453866.1	GENCODE experimental pipeline
ENST00000667577.1	Assembled from SLRseq reads (SRP049776)
ENST00000666116.1	Assembled from SLRseq reads (SRP049776)
ENST00000663363.1	Assembled from SLRseq reads (SRP049776)
ENST00000659917.1	Assembled from SLRseq reads (SRP049776)
ENST00000662490.1	Assembled from SLRseq reads (SRP049776)
ENST00000669310.1	Assembled from SLRseq reads (SRP049776)
ENST00000402357.6	MANE_select
ENST00000380981.3	FLJ32282
ENST00000660776.1	Assembled from SLRseq reads (SRP049776)
ENST00000657875.1	Assembled from SLRseq reads (SRP049776)
ENST00000667851.1	Assembled from SLRseq reads (SRP049776)
ENST00000665699.1	Assembled from SLRseq reads (SRP049776)
ENST00000669789.1	Assembled from SLRseq reads (SRP049776)
ENST00000647629.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000433284.1	GENCODE experimental pipeline
ENST00000649077.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000625038.1	prediction only
ENST00000623197.1	prediction only
ENST00000391625.2	GENCODE experimental pipeline
ENST00000393264.2	GENCODE experimental pipeline
ENST00000420902.1	GENCODE experimental pipeline
ENST00000662299.1	Assembled from SLRseq reads (SRP049776)
ENST00000216267.12	alternative 5' UTR
ENST00000624882.1	prediction only
ENST00000444011.1	GENCODE experimental pipeline
ENST00000666898.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661712.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000422315.1	GENCODE experimental pipeline
ENST00000216268.6	MANE_select
ENST00000330817.11	MANE_select
ENST00000328268.9	MANE_select
ENST00000360612.5	MANE_select
ENST00000389983.6	GENCODE experimental pipeline
ENST00000433387.1	GENCODE experimental pipeline
ENST00000311597.10	MANE_select
ENST00000262794.10	MANE_select
ENST00000395842.3	MANE_select
ENST00000395842.3	NP_443071
ENST00000380909.9	CAGE supported TSS
ENST00000380909.9	MANE_select
ENST00000380903.7	MANE_select
ENST00000248846.10	MANE_select
ENST00000216271.10	MANE_select
ENST00000215659.13	MANE_select
ENST00000330651.11	MANE_select
ENST00000359337.9	MANE_select
ENST00000359337.9	genebuild_only_MANE
ENST00000432455.5	alternative 5' UTR
ENST00000413817.8	MANE_select
ENST00000453835.1	GENCODE experimental pipeline
ENST00000612753.5	MANE_select
ENST00000612753.5	genebuild_only_MANE
ENST00000395744.7	NP_055493.2
ENST00000380817.8	MANE_select
ENST00000395737.2	MANE_select
ENST00000216075.11	MANE_select
ENST00000474879.7	MANE_select
ENST00000474879.7	NP_149977.2
ENST00000420993.7	MANE_select
ENST00000395693.8	MANE_select
ENST00000543927.6	CAGE supported TSS
ENST00000252785.3	alternative 5' UTR
ENST00000638598.2	CAGE supported TSS
ENST00000252029.8	CAGE supported TSS
ENST00000252029.8	CARS
ENST00000252029.8	LR annotation
ENST00000252029.8	MANE_select
ENST00000395681.6	CAGE supported TSS
ENST00000395681.6	LR annotation
ENST00000395680.6	CAGE supported TSS
ENST00000395680.6	LR annotation
ENST00000395680.6	alternative 5' UTR
ENST00000487577.5	alternative 5' UTR
ENST00000395678.7	alternative 5' UTR
ENST00000651196.1	alternative 5' UTR
ENST00000401779.5	GENCODE experimental pipeline
ENST00000428989.2	NP_001014440.2
ENST00000609268.2	CAGE supported TSS
ENST00000648057.3	MANE_select
ENST00000406915.4	GENCODE experimental pipeline
ENST00000406915.4	MANE_select
ENST00000312108.12	KIAA1670
ENST00000312108.12	MANE_select
ENST00000417176.1	alternative 5' UTR
ENST00000406938.3	MANE_select
ENST00000380711.3	GENCODE experimental pipeline
ENST00000656328.1	Assembled from SLRseq reads (SRP049776)
ENST00000666183.1	Assembled from SLRseq reads (SRP049776)
ENST00000654355.1	Assembled from SLRseq reads (SRP049776)
ENST00000662119.1	Assembled from SLRseq reads (SRP049776)
ENST00000652967.1	Assembled from SLRseq reads (SRP049776)
ENST00000654727.1	Assembled from SLRseq reads (SRP049776)
ENST00000329492.6	MANE_select
ENST00000216124.10	MANE_select
ENST00000356098.9	alternative 5' UTR
ENST00000395621.7	alternative 5' UTR
ENST00000453344.6	NP_001078897.1
ENST00000395619.3	alternative 5' UTR
ENST00000661649.1	CAGE supported TSS
ENST00000414786.6	genomic deletion (start of exon 11) due to sequence error
ENST00000414786.6	sequence error
ENST00000262795.6	CAGE supported TSS
ENST00000664402.1	CAGE supported TSS
ENST00000449652.1	GENCODE experimental pipeline
ENST00000216139.10	MANE_select
ENST00000395613.2	GENCODE experimental pipeline
ENST00000423888.5	GENCODE experimental pipeline
ENST00000423888.5	This was annotated as coding due to similarity with FAM41C (SW:Q9NPS7.1 + SW:P0C7U8.1). However, this gene has been removed from Entrez gene. There are no significant pfam A bit
ENST00000651346.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000427528.1	GENCODE experimental pipeline
ENST00000395595.8	CAGE supported TSS
ENST00000413505.1	alternative 5' UTR
ENST00000399012.6	FLJ11323
ENST00000399012.6	QC splicing correct
ENST00000430923.7	alternative 5' UTR
ENST00000445062.6	QC splicing correct
ENST00000445062.6	alternative 5' UTR
ENST00000429181.6	alternative 5' UTR
ENST00000381657.8	MANE_select
ENST00000381657.8	alternative 5' UTR
ENST00000443019.6	QC splicing correct
ENST00000443019.6	alternative 5' UTR
ENST00000415337.6	QC splicing correct
ENST00000415337.6	alternative 5' UTR
ENST00000447472.6	alternative 5' UTR
ENST00000448477.6	alternative 5' UTR
ENST00000390665.9	MANE_select
ENST00000452144.6	fatty acid binding protein 5 (psoriasis-associated) (FABP5) pseudogene
ENST00000431919.6	pseudogene similar to part of keratin 18 (KRT18)
ENST00000381578.6	MANE_select
ENST00000436474.6	ribosomal protein L14 (RPL14) pseudogene
ENST00000400841.8	MANE_select
ENST00000381524.8	colony stimulating factor 2 receptor alpha chain isoform a precursor
ENST00000381529.9	MANE_select
ENST00000381529.9	colony stimulating factor 2 receptor alpha chain isoform a precursor
ENST00000494969.7	QC splicing correct
ENST00000355805.7	colony stimulating factor 2 receptor alpha chain isoform e precursor
ENST00000486791.6	colony stimulating factor 2 receptor alpha chain isoform d precursor
ENST00000355432.8	colony stimulating factor 2 receptor alpha chain isoform b precursor
ENST00000381500.6	colony stimulating factor 2 receptor alpha chain isoform c precursor
ENST00000331035.10	MANE_select
ENST00000331035.10	interleukin 3 receptor, alpha (low affinity) (IL3R, CD123, IL3RX, IL3RY, IL3RAY, hIL-3Ra, MGC34174)
ENST00000432757.6	interleukin 3 receptor, alpha (low affinity) (IL3R, CD123, IL3RX, IL3RY, IL3RAY, hIL-3Ra, MGC34174)
ENST00000381401.11	MANE_select
ENST00000381401.11	solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 (ANT3, ANT3Y, MGC17525)
ENST00000475167.6	solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 (ANT3, ANT3Y, MGC17525)
ENST00000484026.6	solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 (ANT3, ANT3Y, MGC17525)
ENST00000430235.7	putative novel transcript
ENST00000381317.9	MANE_select
ENST00000381317.9	acetylserotonin O-methyltransferase-like (ASTML, ASMTLX)
ENST00000381333.9	acetylserotonin O-methyltransferase-like (ASTML, ASMTLX)
ENST00000463763.6	acetylserotonin O-methyltransferase-like (ASTML, ASMTLX)
ENST00000462195.6	acetylserotonin O-methyltransferase-like (ASTML, ASMTLX)
ENST00000474865.6	acetylserotonin O-methyltransferase-like (ASTML, ASMTLX)
ENST00000381297.10	MANE_select
ENST00000381297.10	novel protein (LOC286530)
ENST00000460672.6	alternative 5' UTR
ENST00000460672.6	novel transcript
ENST00000313871.9	MANE_select
ENST00000381241.9	MANE_select
ENST00000381241.9	acetylserotonin O-methyltransferase (ASMTY, HIOMT, HIOMTY)
ENST00000381229.9	acetylserotonin O-methyltransferase (ASMTY, HIOMT, HIOMTY)
ENST00000381233.8	acetylserotonin O-methyltransferase (ASMTY, HIOMT, HIOMTY)
ENST00000432523.6	acetylserotonin O-methyltransferase (ASMTY, HIOMT, HIOMTY)
ENST00000427886.6	putative novel transcript
ENST00000432272.7	putative novel transcript
ENST00000453953.6	putative novel transcript
ENST00000334651.11	MANE_select
ENST00000381222.8	Ac-like transposable element
ENST00000652001.1	MANE_select
ENST00000652001.1	genebuild_only_MANE
ENST00000381218.8	alternative 5' UTR
ENST00000461691.6	alternative 5' UTR
ENST00000430562.6	novel transcript
ENST00000414513.7	novel transcript
ENST00000445785.6	novel transcript
ENST00000381187.8	NP_001116370.1
ENST00000381184.6	QC splicing correct
ENST00000381184.6	non canonical TEC
ENST00000381192.10	MANE_select
ENST00000624481.4	NAGNAG splice site
ENST00000624481.4	NP_001308297.1
ENST00000623253.4	NAGNAG splice site
ENST00000449611.6	NMD likely if extended
ENST00000644266.2	MANE_select
ENST00000644266.2	NP_001135391
ENST00000398806.8	MANE_select
ENST00000520904.3	alternative 5' UTR
ENST00000469234.6	NMD likely if extended
ENST00000445107.1	not best-in-genome evidence
ENST00000381154.6	MANE_select
ENST00000381154.6	arylsulfatase D
ENST00000458014.1	arylsulfatase D
ENST00000495294.1	arylsulfatase D, variant
ENST00000217890.10	arylsulfatase D
ENST00000481340.1	arylsulfatase D
ENST00000494870.5	arylsulfatase D
ENST00000414053.1	novel transcript
ENST00000381134.9	CAGE supported TSS
ENST00000381134.9	LR annotation
ENST00000381134.9	MANE_select
ENST00000673032.1	upstream ATG
ENST00000545496.6	arylsulfatase E (chondrodysplasia punctata 1)
ENST00000438544.5	alternative 5' UTR
ENST00000438544.5	arylsulfatase E (chondrodysplasia punctata 1)
ENST00000483425.1	QC splicing correct
ENST00000483425.1	arylsulfatase E (chondrodysplasia punctata 1)
ENST00000381130.3	MANE_select
ENST00000381127.6	MANE_select
ENST00000381127.6	arylsulfatase F
ENST00000359361.2	alternative 5' UTR
ENST00000359361.2	arylsulfatase F
ENST00000443851.1	ribosomal protein S24 (RPS24) pseudogene
ENST00000457435.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000457435.2	Assembled from SLRseq reads (SRP049776)
ENST00000668004.1	Assembled from SLRseq reads (SRP049776)
ENST00000668035.1	Assembled from SLRseq reads (SRP049776)
ENST00000656741.1	Assembled from SLRseq reads (SRP049776)
ENST00000217939.7	MANE_select
ENST00000439462.1	argininosuccinate synthetase (ASS) pseudogene
ENST00000262848.6	MANE_select
ENST00000262848.6	protein kinase, X-linked
ENST00000462736.1	protein kinase, X-linked
ENST00000496648.1	protein kinase, X-linked
ENST00000425240.1	protein kinase, X-linked
ENST00000414074.1	novel transcript
ENST00000329806.5	ribosomal protein S27a (RPS27A) pseudogene
ENST00000461011.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653447.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669937.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000483854.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000475317.5	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000490920.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662024.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000425492.5	QC splicing correct
ENST00000648217.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000657193.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671495.1	Assembled from SLRseq reads (SRP049776)
ENST00000486571.1	novel transcript
ENST00000671583.1	Assembled from SLRseq reads (SRP049776)
ENST00000650456.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000657698.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000661656.1	Assembled from SLRseq reads (SRP049776)
ENST00000661924.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655273.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669719.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000424415.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000451781.1	novel transcript
ENST00000381105.2	not best-in-genome evidence
ENST00000660920.1	Assembled from SLRseq reads (SRP049776)
ENST00000420725.1	novel transcript
ENST00000428247.1	NADH dehydrogenase 6 (MTND6) pseudogene
ENST00000440559.1	cytochrome b (MTCYB) pseudogene
ENST00000434972.1	hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit (HADHB)(HADH) pseudogene
ENST00000422914.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000422914.2	putative novel transcript
ENST00000667403.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666122.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000477079.1	QC splicing correct
ENST00000381095.8	MANE_select
ENST00000381095.8	alternative 5' UTR
ENST00000381095.8	neuroligin 4 (HLNX, HNLX, NLGN, KIAA1260, MGC22376)
ENST00000275857.10	neuroligin 4 (HLNX, HNLX, NLGN, KIAA1260, MGC22376)
ENST00000381092.1	alternative 5' UTR
ENST00000381092.1	neuroligin 4 (HLNX, HNLX, NLGN, KIAA1260, MGC22376)
ENST00000469740.1	alternative 5' UTR
ENST00000469740.1	neuroligin 4 (HLNX, HNLX, NLGN, KIAA1260, MGC22376)
ENST00000483337.1	alternative 5' UTR
ENST00000483337.1	neuroligin 4 (HLNX, HNLX, NLGN, KIAA1260, MGC22376)
ENST00000437297.1	ribosomal protein S5 (RPS5) pseudogene
ENST00000381089.7	MANE_select
ENST00000381089.7	variable charge protein on X with eight repeats (VCX-8r) (VCX-A)
ENST00000438499.1	novel transcript
ENST00000381077.10	MANE_select
ENST00000381077.10	NP_036212
ENST00000424830.6	NP_001129037
ENST00000463344.1	ribosomal protein S27a (RPS27A) pseudogene
ENST00000447553.1	ribosomal protein, large, P1 (RPLP1) pseudogene
ENST00000666110.2	upstream ATG
ENST00000674429.1	CAGE supported TSS
ENST00000674429.1	MANE_select
ENST00000674429.1	upstream ATG
ENST00000660000.2	upstream ATG
ENST00000217961.5	upstream ATG
ENST00000381042.9	GS2 protein (DXS1283E)
ENST00000381042.9	MANE_select
ENST00000442940.1	GS2 protein (DXS1283E)
ENST00000422160.1	putative novel transcript
ENST00000649338.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000317103.5	MANE_select
ENST00000317103.5	non canonical polymorphism
ENST00000317103.5	variable charge protein on X with two repeats (VCX-2r) (VCXB)
ENST00000381032.6	MANE_select
ENST00000670272.1	CAGE supported TSS
ENST00000262648.8	Kallmann syndrome 1 sequence
ENST00000262648.8	MANE_select
ENST00000481896.1	Kallmann syndrome 1 sequence
ENST00000488294.1	Kallmann syndrome 1 sequence
ENST00000437611.1	novel pseudogene
ENST00000381003.7	MANE_select
ENST00000381003.7	NP_777611
ENST00000381003.7	family with sequence similarity 9, member A
ENST00000422795.1	novel pseudogene
ENST00000440430.1	putative novel transcript
ENST00000650341.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000436419.1	nucleolar and coiled-body phosphoprotein 1 (NOLC1)(P130, NOPP130, NOPP140, KIAA0035) pseudogene
ENST00000362066.7	family with sequence similarity 9, member B
ENST00000327220.10	MANE_select
ENST00000461107.5	family with sequence similarity 9, member B
ENST00000494744.1	family with sequence similarity 9, member B
ENST00000434191.1	uncharacterized hematopoietic stem/progenitor cells protein MDS027 (MDS207) pseudogene
ENST00000432442.1	novel transcript (LOC159036)
ENST00000416620.2	chromodomain protein, Y chromosome-like (CDYL) pseudogene
ENST00000441088.5	alternative 5' UTR
ENST00000415293.5	alternative 5' UTR
ENST00000645353.2	CAGE supported TSS
ENST00000645353.2	LR annotation
ENST00000645353.2	MANE_select
ENST00000422314.5	alternative 5' UTR
ENST00000645686.1	alternative 5' UTR
ENST00000646640.1	alternative 5' UTR
ENST00000452824.5	alternative 5' UTR
ENST00000497555.1	transducin (beta)-like 1X-linked (EBI, TBL1)
ENST00000467482.6	MANE_select
ENST00000467482.6	ocular albinism 1 (Nettleship-Falls)
ENST00000487206.1	ocular albinism 1 (Nettleship-Falls)
ENST00000447366.5	ocular albinism 1 (Nettleship-Falls)
ENST00000431126.1	ocular albinism 1 (Nettleship-Falls)
ENST00000480178.1	ocular albinism 1 (Nettleship-Falls)
ENST00000380913.8	MANE_select
ENST00000380913.8	apical protein-like (Xenopus laevis)
ENST00000493668.1	apical protein-like (Xenopus laevis)
ENST00000452575.1	apical protein-like (Xenopus laevis) (FLJ39277)
ENST00000400019.2	eukaryotic translation initiation factor 5 (EIF5) pseudogene
ENST00000432945.1	high-mobility group nucleosome binding domain 1 (HMGN1) pseudogene
ENST00000445307.4	LOC100288814
ENST00000445307.4	MANE_select
ENST00000380861.9	5' UTR
ENST00000380861.9	MANE_select
ENST00000380861.9	novel protein (KIAA1280) (contains DKFZp761A1124, FLJ21030, FLJ34617) similar to KIBRA
ENST00000466248.1	QC splicing correct
ENST00000430057.1	putative novel transcript
ENST00000380833.9	MANE_select
ENST00000380833.9	chloride channel 4
ENST00000380829.5	chloride channel 4
ENST00000454850.1	chloride channel 4
ENST00000454113.1	novel transcript
ENST00000453318.6	alternative 5' UTR
ENST00000380779.5	alternative 5' UTR
ENST00000380779.5	alternatively spliced in 5' UTR, shares CDS with Em:AC117406.1.1
ENST00000380779.5	midline 1 (Opitz/BBB syndrome)
ENST00000380780.5	alternative 5' UTR
ENST00000380780.5	alternatively spliced in 5' UTR, shares CDS with Em:AC117406.1.1
ENST00000380780.5	midline 1 (Opitz/BBB syndrome)
ENST00000317552.9	MANE_select
ENST00000317552.9	alternative 5' UTR
ENST00000317552.9	alternatively spliced in 5' UTR, shares partial CDS with Em:AC117406.1.1
ENST00000317552.9	midline 1 (Opitz/BBB syndrome)
ENST00000380785.5	midline 1 (Opitz/BBB syndrome)
ENST00000380787.5	alternative 5' UTR
ENST00000380787.5	alternatively spliced in 5' UTR, shares CDS with Em:AC117406.1.1
ENST00000380787.5	midline 1 (Opitz/BBB syndrome)
ENST00000380782.6	non canonical TEC
ENST00000674917.1	AY539962.1
ENST00000479925.1	midline 1 (Opitz/BBB syndrome)
ENST00000413894.5	midline 1 (Opitz/BBB syndrome)
ENST00000669054.1	Assembled from SLRseq reads (SRP049776)
ENST00000658066.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000321143.8	holocytochrome c synthase (cytochrome c heme-lyase)
ENST00000380762.5	MANE_select
ENST00000380762.5	holocytochrome c synthase (cytochrome c heme-lyase)
ENST00000380763.7	holocytochrome c synthase (cytochrome c heme-lyase)
ENST00000380736.5	Rho GTPase activating protein 6
ENST00000303025.10	Rho GTPase activating protein 6
ENST00000337414.9	MANE_select
ENST00000337414.9	Rho GTPase activating protein 6
ENST00000489330.6	QC splicing correct
ENST00000380718.1	Rho GTPase activating protein 6
ENST00000491514.1	Rho GTPase activating protein 6
ENST00000380714.7	MANE_select
ENST00000446186.1	glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2) (GOT2) pseudogene
ENST00000422830.1	LIM domain kinase 2 (LIMK2) pseudogene
ENST00000647869.1	NAGNAG splice site
ENST00000312196.10	MANE_select
ENST00000647857.1	male-specific lethal 3-like 1 (Drosophila)
ENST00000398527.7	CAGE supported TSS
ENST00000476743.5	CAGE supported TSS
ENST00000476743.5	alternative 5' UTR
ENST00000648120.1	CAGE supported TSS
ENST00000649078.1	CAGE supported TSS
ENST00000649078.1	alternative 5' UTR
ENST00000649602.1	CAGE supported TSS
ENST00000649602.1	alternative 5' UTR
ENST00000650215.1	CAGE supported TSS
ENST00000649785.1	CAGE supported TSS
ENST00000649685.1	CAGE supported TSS
ENST00000649685.1	alternative 5' UTR
ENST00000649649.1	CAGE supported TSS
ENST00000649649.1	alternative 5' UTR
ENST00000380693.8	CAGE supported TSS
ENST00000380693.8	NAGNAG splice site
ENST00000380692.7	CAGE supported TSS
ENST00000380692.7	alternative 5' UTR
ENST00000650628.1	CAGE supported TSS
ENST00000650628.1	alternative 5' UTR
ENST00000649851.1	CAGE supported TSS
ENST00000421368.3	CAGE supported TSS
ENST00000421368.3	alternative 5' UTR
ENST00000649797.1	CAGE supported TSS
ENST00000648614.1	CAGE supported TSS
ENST00000482871.6	CAGE supported TSS
ENST00000482871.6	alternative 5' UTR
ENST00000648013.1	CAGE supported TSS
ENST00000648013.1	alternative 5' UTR
ENST00000649271.1	CAGE supported TSS
ENST00000649271.1	alternative 5' UTR
ENST00000483645.6	CAGE supported TSS
ENST00000483645.6	alternative 5' UTR
ENST00000648545.1	alternative 3' UTR
ENST00000650106.1	alternative 3' UTR
ENST00000656302.1	upstream ATG
ENST00000657176.1	CAGE supported TSS
ENST00000657176.1	alternative 5' UTR
ENST00000672010.1	CAGE supported TSS
ENST00000380682.5	novel protein (KIAA0316)
ENST00000675598.1	MANE_select
ENST00000425057.1	putative novel transcript
ENST00000443728.1	ribosomal protein L17 (RPL17) pseudogene
ENST00000380663.7	non canonical TEC
ENST00000380668.10	MANE_select
ENST00000457574.1	proteasome (prosome, macropain) subunit, alpha (PSMA6) pseudogene
ENST00000453682.1	mitochondrial ribosomal protein L35 (MRPL35) pseudogene
ENST00000380659.4	MANE_select
ENST00000380659.4	toll-like receptor 7
ENST00000484204.1	toll-like receptor 7
ENST00000451564.1	novel transcript
ENST00000218032.7	MANE_select
ENST00000451311.7	MANE_select
ENST00000451311.7	alternative 5' UTR
ENST00000380636.1	alternative 5' UTR
ENST00000380633.1	alternative 5' UTR
ENST00000380625.8	MANE_select
ENST00000380625.8	family with sequence similarity 9, member C
ENST00000333995.7	alternative 3' UTR
ENST00000438997.1	alternative 3' UTR
ENST00000438997.1	family with sequence similarity 9, member C
ENST00000412485.1	novel transcript
ENST00000670053.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000431486.1	novel transcript
ENST00000380622.4	novel protein similar to Machado-Joseph disease gene (MJD) (LOC92552)
ENST00000458400.1	novel pseudogene
ENST00000669963.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661545.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659526.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656410.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456091.2	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000456091.2	novel transcript
ENST00000661104.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671651.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655502.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661629.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656271.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656979.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661464.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000419566.5	novel transcript
ENST00000668192.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665887.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659191.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653729.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667868.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656111.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667532.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660305.1	Assembled from SLRseq reads (SRP049776)
ENST00000446964.1	putative novel transcript
ENST00000420403.1	putative novel transcript
ENST00000388829.3	glutathione peroxidase 1 (GPX1) pseudogene
ENST00000361306.6	EGF-like-domain multiple 6
ENST00000361306.6	MANE_select
ENST00000380602.3	EGF-like-domain multiple 6
ENST00000473826.1	EGF-like-domain multiple 6
ENST00000457129.2	ribosomal protein L30 (RPL30) pseudogene
ENST00000490617.1	novel transcript
ENST00000380600.1	novel protein
ENST00000467590.1	novel protein (FLJ39713)
ENST00000463321.1	novel transcript
ENST00000464506.2	MANE_select
ENST00000243325.6	alternative 5' UTR
ENST00000618931.2	alternative 5' UTR
ENST00000380579.6	MANE_select
ENST00000380579.6	non canonical U12
ENST00000458511.6	non canonical U12
ENST00000380578.1	non canonical U12
ENST00000519885.5	non canonical U12
ENST00000518847.1	alternative 5' UTR
ENST00000380567.5	oral-facial-digital syndrome 1
ENST00000340096.11	MANE_select
ENST00000340096.11	oral-facial-digital syndrome 1
ENST00000485052.5	oral-facial-digital syndrome 1
ENST00000490265.5	oral-facial-digital syndrome 1
ENST00000466534.1	oral-facial-digital syndrome 1
ENST00000464463.5	oral-facial-digital syndrome 1
ENST00000474705.1	oral-facial-digital syndrome 1
ENST00000316715.9	MANE_select
ENST00000316715.9	NP_001001995
ENST00000454189.6	NP_001001994
ENST00000355135.6	NP_001001996
ENST00000493085.5	alternative 5' UTR
ENST00000468080.1	alternative 5' UTR
ENST00000475307.1	alternative 5' UTR
ENST00000448948.1	novel transcript
ENST00000391359.2	novel transcript
ENST00000680255.1	MANE_select
ENST00000680255.1	alternative 5' UTR
ENST00000477386.2	alternative 5' UTR
ENST00000477386.2	novel transcript
ENST00000380523.8	novel protein (FLJ20514)
ENST00000398355.7	novel protein
ENST00000332885.7	novel protein
ENST00000460203.1	novel transcript
ENST00000411687.1	ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) (UBE2E3) pseudogene
ENST00000218075.9	MANE_select
ENST00000218075.9	glycine receptor alpha 2
ENST00000355020.8	NP_001112358
ENST00000415367.1	glycine receptor alpha 2
ENST00000643728.1	alternative 3' UTR
ENST00000650831.1	MANE_select
ENST00000650831.1	genebuild_only_MANE
ENST00000324138.7	novel protein (FLJ34064)
ENST00000452869.1	alternative 5' UTR
ENST00000489126.1	novel transcript
ENST00000380492.8	MANE_select
ENST00000380492.8	novel protein (MGC26706)
ENST00000495110.1	novel transcript
ENST00000448018.1	tumor protein, translationally-controlled 1 (TPT1) pseudogene
ENST00000444401.2	ribosomal protein L35a (RPL35A) pseudogene
ENST00000380483.7	ankyrin repeat and SOCS box-containing 9
ENST00000380485.7	ankyrin repeat and SOCS box-containing 9
ENST00000380488.9	MANE_select
ENST00000380488.9	ankyrin repeat and SOCS box-containing 9
ENST00000473862.5	ankyrin repeat and SOCS box-containing 9
ENST00000481384.5	ankyrin repeat and SOCS box-containing 9
ENST00000484017.5	ankyrin repeat and SOCS box-containing 9
ENST00000470015.1	ankyrin repeat and SOCS box-containing 9
ENST00000480796.6	MANE_select
ENST00000344384.8	NP_001012428
ENST00000542278.6	alternative 5' UTR
ENST00000333590.6	CAGE supported TSS
ENST00000333590.6	MANE_select
ENST00000333590.6	phosphatidylinositol glycan, class A (paroxysmal nocturnal hemoglobinuria)
ENST00000635598.1	phosphatidylinositol glycan, class A (paroxysmal nocturnal hemoglobinuria)
ENST00000637296.1	alternative 5' UTR
ENST00000482148.6	phosphatidylinositol glycan, class A (paroxysmal nocturnal hemoglobinuria)
ENST00000475746.1	phosphatidylinositol glycan, class A (paroxysmal nocturnal hemoglobinuria)
ENST00000463173.1	phosphatidylinositol glycan, class A (paroxysmal nocturnal hemoglobinuria)
ENST00000635543.1	alternative 5' UTR
ENST00000297904.4	MANE_select
ENST00000297904.4	c-fos induced growth factor (vascular endothelial growth factor D)
ENST00000488351.1	c-fos induced growth factor (vascular endothelial growth factor D)
ENST00000492432.5	novel transcript
ENST00000380420.10	MANE_select
ENST00000380420.10	Pirin (PIR)
ENST00000380421.3	Pirin (PIR)
ENST00000380421.3	alternative 5' UTR
ENST00000380421.3	alternatively spliced 5'UTR, shared CDS with .1.1
ENST00000484433.1	novel transcript
ENST00000476381.5	novel transcript
ENST00000471725.1	novel transcript
ENST00000357607.6	BMX non-receptor tyrosine kinase
ENST00000348343.11	BMX non-receptor tyrosine kinase
ENST00000348343.11	MANE_select
ENST00000348343.11	alternative 5' UTR
ENST00000348343.11	alternatively spliced 5' UTR, shares CDS with .2.1
ENST00000463891.1	BMX non-receptor tyrosine kinase
ENST00000463891.1	this variant and variant fragment .2.6 could be part of a single variant.
ENST00000342014.6	BMX non-receptor tyrosine kinase
ENST00000342014.6	alternative 5' UTR
ENST00000342014.6	alternatively spliced 5' UTR, shares CDS with .2.1
ENST00000489983.1	BMX non-receptor tyrosine kinase
ENST00000489983.1	this variant and variant fragment .2.5 could be part of a single variant.
ENST00000677282.1	CAGE supported TSS
ENST00000680121.1	CAGE supported TSS
ENST00000427411.2	CAGE supported TSS
ENST00000427411.2	alternative 5' UTR
ENST00000678073.1	alternative 5' UTR
ENST00000252519.8	CAGE supported TSS
ENST00000252519.8	MANE_select
ENST00000252519.8	NP_068576.1
ENST00000252519.8	angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
ENST00000471548.5	angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
ENST00000473851.1	angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
ENST00000649243.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000421585.1	putative novel transcript
ENST00000380342.4	MANE_select
ENST00000380342.4	kidney-specific membrane protein (NX17)
ENST00000650271.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000334569.3	novel pseudogene
ENST00000498004.5	alternative 5' UTR
ENST00000318636.8	MANE_select
ENST00000479740.5	alternative 5' UTR
ENST00000380308.7	U2 small nuclear ribonucleoprotein auxiliary factor, small subunit 2 (U2AF1RS2)
ENST00000307771.8	MANE_select
ENST00000307771.8	U2 small nuclear ribonucleoprotein auxiliary factor, small subunit 2 (U2AF1RS2)
ENST00000468028.1	U2 small nuclear ribonucleoprotein auxiliary factor, small subunit 2 (U2AF1RS2)
ENST00000672987.1	CAGE supported TSS
ENST00000672987.1	LR annotation
ENST00000672987.1	MANE_select
ENST00000672987.1	upstream ATG
ENST00000329235.6	adaptor-related protein complex 1, sigma 2 subunit
ENST00000671830.1	upstream ATG
ENST00000380291.5	adaptor-related protein complex 1, sigma 2 subunit
ENST00000479184.2	adaptor-related protein complex 1, sigma 2 subunit
ENST00000673591.1	upstream ATG
ENST00000412724.1	SET translocation (myeloid leukemia-associated) (SET) pseudogene
ENST00000380289.3	MANE_select
ENST00000380289.3	gastrin-releasing peptide receptor
ENST00000454712.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000435789.1	novel transcript
ENST00000400004.6	MANE_select
ENST00000400003.1	expression from this locus is supported by Chomez et al. (2001) Cancer Res. 61(14):5544-51
ENST00000443382.1	ribosomal protein L6 (RPL6) pseudogene
ENST00000447112.1	heat shock protein pseudogene
ENST00000359276.9	CTP synthase II
ENST00000359276.9	MANE_select
ENST00000380241.7	CTP synthase II (FLJ14008, FLJ13487)
ENST00000380241.7	FLJ14008, FLJ13487
ENST00000483053.1	CTP synthase II (FLJ14008, FLJ13487)
ENST00000380200.3	MANE_select
ENST00000380200.3	calbindin 3, (vitamin D-dependent calcium binding protein)
ENST00000380155.4	MANE_select
ENST00000380122.10	FLJ11209
ENST00000380122.10	MANE_select
ENST00000441100.1	ribosomal protein L12 (RPL12) pseudogene
ENST00000380087.7	MANE_select
ENST00000465244.1	FLJ45403
ENST00000426556.1	novel pseudogene
ENST00000357277.8	MANE_select
ENST00000470686.1	FLJ32565
ENST00000453841.1	chromobox homolog 5 (HP1 alpha homolog, Drosophila) (CBX5) pseudogene
ENST00000439415.1	chromobox homolog 5 (HP1 alpha homolog, Drosophila) (CBX5) pseudogene
ENST00000676302.1	CAGE supported TSS
ENST00000676302.1	MANE_select
ENST00000398097.7	NP_001129496.1
ENST00000485305.1	putative novel transcript
ENST00000433228.1	novel transcript
ENST00000452788.1	putative novel transcript
ENST00000427102.1	calcium binding protein P22 (CHP)pseudogene
ENST00000380043.7	NP_006737
ENST00000380041.8	MANE_select
ENST00000380041.8	NP_001032629
ENST00000419185.1	alternative 5' UTR
ENST00000451717.6	MANE_select
ENST00000451717.6	genebuild_only_MANE
ENST00000360011.5	alternative 5' UTR
ENST00000418200.1	Mdm4, transformed 3T3 cell double minute 4, p53 binding protein (mouse)(MDM4) pseudogene
ENST00000453902.1	non canonical TEC
ENST00000380033.9	MANE_select
ENST00000380033.9	novel protein (MGC33653)
ENST00000251900.9	MANE_select
ENST00000251900.9	sex comb on midleg-like 2 (Drosophila)
ENST00000420857.6	sex comb on midleg-like 2 (Drosophila)
ENST00000491988.1	sex comb on midleg-like 2 (Drosophila)
ENST00000416049.2	thymosin, beta 10 (TMSB10) pseudogene
ENST00000379996.7	alternative 5' UTR
ENST00000379996.7	cyclin-dependent kinase-like 5
ENST00000623535.2	CAGE supported TSS
ENST00000623535.2	LR annotation
ENST00000623535.2	MANE_select
ENST00000637881.1	alternative 5' UTR
ENST00000379989.6	continued  from bA558P14.1.1 in Em:AL109798
ENST00000379989.6	cyclin-dependent kinase-like 5
ENST00000624953.1	alternative 5' UTR
ENST00000623364.3	alternative 5' UTR
ENST00000624700.3	alternative 5' UTR
ENST00000463994.4	alternative 5' UTR
ENST00000415117.1	gap junction protein, alpha 2, 38kDa (connexin 38) (GJA2) pseudogene
ENST00000379984.4	MANE_select
ENST00000379984.4	retinoschisis (X-linked, juvenile) 1
ENST00000476595.1	retinoschisis (X-linked, juvenile) 1
ENST00000358001.4	pallidin homolog (mouse) (PLDN) pseudogene
ENST00000439908.1	novel pseudogene
ENST00000452900.5	novel transcript
ENST00000654006.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000439295.1	novel transcript
ENST00000379942.5	MANE_select
ENST00000379942.5	phosphorylase kinase, alpha 2 (liver)
ENST00000481718.1	phosphorylase kinase, alpha 2 (liver)
ENST00000469485.5	phosphorylase kinase, alpha 2 (liver)
ENST00000473597.1	phosphorylase kinase, alpha 2 (liver)
ENST00000473739.5	phosphorylase kinase, alpha 2 (liver)
ENST00000469645.5	phosphorylase kinase, alpha 2 (liver)
ENST00000486231.2	NMD likely if extended
ENST00000486231.2	phosphorylase kinase, alpha 2 (liver)
ENST00000464455.1	phosphorylase kinase, alpha 2 (liver)
ENST00000655807.1	Assembled from SLRseq reads (SRP049776)
ENST00000662768.1	Assembled from SLRseq reads (SRP049776)
ENST00000658230.1	Assembled from SLRseq reads (SRP049776)
ENST00000663465.1	Assembled from SLRseq reads (SRP049776)
ENST00000379869.8	MANE_select
ENST00000423505.5	pyruvate dehydrogenase (lipoamide) alpha 1
ENST00000422285.7	MANE_select
ENST00000422285.7	pyruvate dehydrogenase (lipoamide) alpha 1
ENST00000417819.5	pyruvate dehydrogenase (lipoamide) alpha 1
ENST00000492364.1	pyruvate dehydrogenase (lipoamide) alpha 1
ENST00000355808.9	pyruvate dehydrogenase (lipoamide) alpha 1
ENST00000379805.3	pyruvate dehydrogenase (lipoamide) alpha 1
ENST00000479146.1	pyruvate dehydrogenase (lipoamide) alpha 1
ENST00000481733.1	pyruvate dehydrogenase (lipoamide) alpha 1
ENST00000379804.1	pyruvate dehydrogenase (lipoamide) alpha 1
ENST00000478795.1	pyruvate dehydrogenase (lipoamide) alpha 1
ENST00000397821.8	MANE_select
ENST00000397821.8	SH3-domain kinase binding protein 1 (CIN85)
ENST00000379716.5	SH3-domain kinase binding protein 1 (CIN85)
ENST00000379698.8	SH3-domain kinase binding protein 1 (CIN85)
ENST00000379726.7	SH3-domain kinase binding protein 1 (CIN85)
ENST00000379697.7	SH3-domain kinase binding protein 1 (CIN85)
ENST00000494961.5	SH3-domain kinase binding protein 1 (CIN85)
ENST00000477102.1	SH3-domain kinase binding protein 1 (CIN85)
ENST00000432234.5	SH3-domain kinase binding protein 1 (CIN85)
ENST00000431164.1	SH3-domain kinase binding protein 1 (CIN85)
ENST00000379687.7	N-terminal of protein extended by 50 amino acids from match to mouse Em:AK044001.1
ENST00000379687.7	novel protein (LOC256643)
ENST00000472158.5	novel protein
ENST00000466702.1	novel transcript
ENST00000471203.1	novel transcript
ENST00000340625.3	novel protein (FLH37342)
ENST00000379643.10	MANE_select
ENST00000466145.1	novel transcript
ENST00000379607.10	MANE_select
ENST00000379607.10	eukaryotic translation initiation factor 1A (EIF4C, EIF1AX, eIF-1A, eIF-4C)
ENST00000379593.1	eukaryotic translation initiation factor 1A (EIF4C, EIF1AX, eIF-1A, eIF-4C)
ENST00000424026.1	putative novel transcript
ENST00000379565.9	CAGE supported TSS
ENST00000379565.9	LR annotation
ENST00000379565.9	MANE_select
ENST00000643402.1	alternative 5' UTR
ENST00000647265.1	alternative 5' UTR
ENST00000457145.6	CAGE supported TSS
ENST00000643337.1	alternative 5' UTR
ENST00000644893.1	NAGNAG splice site
ENST00000438357.2	alternative 5' UTR
ENST00000636678.1	non canonical TEC
ENST00000642359.1	connector enhancer of KSR2 (KIAA0902)
ENST00000379510.5	MANE_select
ENST00000379510.5	connector enhancer of KSR2 (KIAA0902)
ENST00000425654.7	connector enhancer of KSR2 (KIAA0902)
ENST00000645679.1	NMD likely if extended
ENST00000543067.6	connector enhancer of KSR2 (KIAA0902)
ENST00000279451.9	NP_001317702.1
ENST00000645245.1	NP_001317701.1
ENST00000644585.1	NP_001317699.1
ENST00000645791.1	NP_001317700.1
ENST00000479158.2	NMD likely if extended
ENST00000480138.2	connector enhancer of KSR2 (KIAA0902)
ENST00000457739.1	retinoic acid receptor responder (tazarotene induced) 2 (RARRES2) (TIG2) pseudogene
ENST00000379499.3	MANE_select
ENST00000379499.3	novel protein (FLJ34960)
ENST00000379494.4	CAGE supported TSS
ENST00000379494.4	LR annotation
ENST00000379494.4	MANE_select
ENST00000494525.1	small muscle protein, X-linked
ENST00000379484.10	MANE_select
ENST00000465888.1	novel transcript
ENST00000429584.3	MANE_select
ENST00000429584.3	novel protein FLJ34531 similar to YY1 transcription factor
ENST00000404933.7	MANE_select
ENST00000379374.5	MANE_select
ENST00000424650.1	FLJ37866
ENST00000455399.1	novel transcript
ENST00000323684.4	MANE_select
ENST00000456621.1	novel transcript
ENST00000415522.1	MraW methylase family pseudogene
ENST00000422934.1	ribosomal protein L26 (RPL26) pseudogene
ENST00000442155.1	putative novel transcript
ENST00000327968.7	MANE_select
ENST00000327968.7	cancer-associated gene (CAGE)
ENST00000312214.5	family with sequence similarity 3, member C (FAM3C) pseudogene
ENST00000419302.1	pseudogene similar to part of VIAF1 (IAP-associated factor VIAF1)
ENST00000379361.5	FLJ30296
ENST00000379361.5	MANE_select
ENST00000445047.1	novel pseudogene
ENST00000379349.5	peroxiredoxin 4
ENST00000379341.9	MANE_select
ENST00000379341.9	peroxiredoxin 4
ENST00000495599.1	peroxiredoxin 4
ENST00000439422.1	peroxiredoxin 4
ENST00000379303.10	MANE_select
ENST00000379303.10	NP_001032248
ENST00000366134.2	novel transcript
ENST00000379251.7	spermidine/spermine N1-acetyltransferase
ENST00000379253.7	spermidine/spermine N1-acetyltransferase
ENST00000379254.5	spermidine/spermine N1-acetyltransferase
ENST00000379270.4	spermidine/spermine N1-acetyltransferase
ENST00000489394.5	spermidine/spermine N1-acetyltransferase
ENST00000463236.5	spermidine/spermine N1-acetyltransferase
ENST00000487713.1	spermidine/spermine N1-acetyltransferase
ENST00000474223.1	spermidine/spermine N1-acetyltransferase
ENST00000462639.1	spermidine/spermine N1-acetyltransferase
ENST00000379226.9	MANE_select
ENST00000634086.1	alternative 3' UTR
ENST00000476598.1	novel transcript
ENST00000439528.5	alternative 3' UTR
ENST00000633372.1	CAGE supported TSS
ENST00000379211.8	MANE_select
ENST00000379211.8	novel protein (FLJ25444)
ENST00000648352.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000435707.1	novel protein
ENST00000328046.8	MANE_select
ENST00000328046.8	novel protein (KIAA1677)
ENST00000487075.1	eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
ENST00000253039.9	MANE_select
ENST00000253039.9	eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
ENST00000423068.1	eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
ENST00000460032.1	eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
ENST00000427551.1	novel transcript
ENST00000497813.1	zinc finger protein, X-linked
ENST00000428571.5	zinc finger protein, X-linked
ENST00000419690.5	zinc finger protein, X-linked
ENST00000304543.10	MANE_select
ENST00000304543.10	zinc finger protein, X-linked
ENST00000379177.5	zinc finger protein, X-linked
ENST00000459724.1	zinc finger protein, X-linked
ENST00000480195.1	zinc finger protein, X-linked
ENST00000338565.3	zinc finger protein, X-linked
ENST00000474385.1	zinc finger protein, X-linked
ENST00000486479.2	CAGE supported TSS
ENST00000486479.2	transcription factor (p38 interacting protein) (P38IP) pseudogene
ENST00000419089.1	ribosomal protein S26 (RPS26) pseudogene
ENST00000648777.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000379162.9	MANE_select
ENST00000379162.9	pyruvate dehydrogenase kinase isoenzyme 3
ENST00000379162.9	pyruvate dehydrogenase kinase, isoenzyme 3
ENST00000568479.2	CAGE supported TSS
ENST00000568479.2	LR annotation
ENST00000493226.1	pyruvate dehydrogenase kinase isoenzyme 3
ENST00000436794.1	small nuclear ribonucleoprotein polypeptide E (SNRPE) pseudogene
ENST00000379144.7	MANE_select
ENST00000379144.7	phosphate cytidylyltransferase 1 choline beta isoform
ENST00000379145.5	phosphate cytidylyltransferase 1 choline beta isoform
ENST00000356768.8	phosphate cytidylyltransferase 1 choline beta isoform
ENST00000496020.1	phosphate cytidylyltransferase 1 choline beta isoform
ENST00000458741.2	histone 1 H2bb (HIST1H2BB) pseudogene
ENST00000432626.1	putative novel transcript
ENST00000453977.2	ribosomal protein L23 (RPL23) pseudogene
ENST00000379068.8	MANE_select
ENST00000379068.8	polymerase (DNA directed), alpha
ENST00000677890.1	BX648513.1
ENST00000379059.7	polymerase (DNA directed), alpha
ENST00000676703.1	align_id:1380627|asmbl_100530
ENST00000611764.2	align_id:3767413|asmbl_257578
ENST00000493342.1	polymerase (DNA directed), alpha
ENST00000678249.1	align_id:1380629|asmbl_100532
ENST00000480125.1	polymerase (DNA directed), alpha
ENST00000677083.1	align_id:1380631|asmbl_100534
ENST00000679301.1	align_id:3767417|asmbl_257582
ENST00000494204.1	polymerase (DNA directed), alpha
ENST00000494204.1	this variant and variant fragment Em:AC079375.1.3 could form part of one single variant
ENST00000677939.1	align_id:1380634|asmbl_100537
ENST00000379044.5	MANE_select
ENST00000438281.1	platelet-activating factor acetylhydrolase, isoform Ib, beta subunit 30kDa (PAFAH1B2) pseudogene
ENST00000433306.1	methyltransferase-like 1 (METTL1) pseudogene
ENST00000426762.1	ribonuclease P1 (RNASEP1) pseudogene
ENST00000496795.1	RAN binding protein 1 (RANBP1) pseudogene
ENST00000423914.1	novel transcript
ENST00000325250.2	MANE_select
ENST00000325250.2	novel protein (MGC33889) (FLJ32799) similar to melanoma antigen (MAGE) family B proteins
ENST00000436203.1	pseudogene similar to melanoma antigen (MAGE) family B proteins
ENST00000444765.1	pseudogene similar to part of melanoma antigen family B proteins
ENST00000379034.1	MANE_select
ENST00000379034.1	melanoma antigen, family B, 6 (MAGEB6) (FLJ40442)
ENST00000450430.1	pseudogene similar to part of melanoma antigen family B proteins
ENST00000602297.1	MANE_select
ENST00000602297.1	possibly a pseudogene
ENST00000446214.1	pseudogene similar to part of melanoma antigen family proteins
ENST00000438690.1	MAWD binding protein (MAWBP) pseudogene
ENST00000439323.1	formin 2 (FMN2) pseudogene
ENST00000420915.1	VENT-like homeobox 2 pseudogene 1 (VENTX2P1)
ENST00000420915.1	possible expressed pseudogene - mRNA Em:AF164963.1 is associated with this locus
ENST00000569334.2	confirm experimentally
ENST00000431868.1	pseudogene similar to part of adaptor-related protein complex 3, sigma 1 subunit (AP3S1)
ENST00000402913.2	ribosomal protein L7 (RPL7) pseudogene
ENST00000415560.1	high mobility group AT-hook 1 (HMGA1) pseudogene
ENST00000436019.2	novel transcript
ENST00000422048.5	novel transcript
ENST00000669376.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670197.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670482.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671147.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000608735.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661825.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668407.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669876.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000452559.1	novel pseudogene
ENST00000420305.1	protein tyrosine phosphatase type IVA family pseudogene
ENST00000412172.4	MANE_select
ENST00000424882.2	pseudogene similar to part of radixin (RDX)
ENST00000367074.4	pseudogene similar to part of radixin (RDX)
ENST00000431122.2	alternative 5' UTR
ENST00000356790.2	FLJ32965
ENST00000356790.2	MANE_select
ENST00000450488.1	MAGE family pseudogene
ENST00000432774.1	MAGE family pseudogene
ENST00000456549.1	pseudogene similar to part of adipose differentiation-related protein (ADFP)
ENST00000457557.1	MAGE family pseudogene
ENST00000421897.1	novel pseudogene
ENST00000449607.1	pseudogene similar to part of origin recognition complex, subunit 1-like (yeast) (ORC1L)
ENST00000441525.4	MANE_select
ENST00000456037.1	putative novel transcript
ENST00000378993.6	MANE_select
ENST00000416765.1	H3 histone, family 3B (H3.3B) (H3F3B) pseudogene
ENST00000424251.1	putative novel transcript
ENST00000416609.1	pseudogene similar to part of transcription factor p38 interacting protein (P38IP)
ENST00000441918.1	phosphatidylinositol glycan, class F (PIGF) pseudogene
ENST00000378988.5	MANE_select
ENST00000378988.5	melanoma antigen, family B, 2
ENST00000361644.3	melanoma antigen, family B, 3
ENST00000378982.4	MANE_select
ENST00000378982.4	melanoma antigen, family B, 4
ENST00000378981.7	melanoma antigen, family B, 1
ENST00000378970.5	MANE_select
ENST00000378970.5	nuclear receptor subfamily 0, group B, member 1
ENST00000378963.1	nuclear receptor subfamily 0, group B, member 1
ENST00000378962.4	MANE_select
ENST00000378962.4	novel protein (FLJ11577)
ENST00000378946.7	NP_976325
ENST00000427190.6	CAGE supported TSS
ENST00000427190.6	MANE_select
ENST00000441146.1	novel transcript
ENST00000467136.5	novel protein
ENST00000378928.2	NMD likely if extended
ENST00000288422.3	alternative 5' UTR
ENST00000445240.1	novel transcript
ENST00000359202.5	MANE_select
ENST00000359202.5	ferritin, heavy polypeptide-like 17
ENST00000679437.1	CAGE supported TSS
ENST00000681026.1	CAGE supported TSS
ENST00000619831.5	CAGE supported TSS
ENST00000357033.9	MANE_select
ENST00000378677.6	NP_004000
ENST00000378702.8	NP_004006
ENST00000474231.5	CAGE supported TSS
ENST00000474231.5	NP_004012
ENST00000681839.1	CAGE supported TSS
ENST00000472266.1	dystrophin (muscular dystrophy, Duchenne and Becker types)
ENST00000648644.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000458237.1	nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1) pseudogene
ENST00000439592.1	putative novel transcript
ENST00000436520.1	tubulin-specific chaperone a (TBCA) pseudogene
ENST00000399993.2	lysosomal-associated membrane protein 1 (LAMP1) pseudogene
ENST00000653485.1	Assembled from SLRseq reads (SRP049776)
ENST00000664553.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000668394.1	Assembled from SLRseq reads (SRP049776)
ENST00000670405.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659014.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656777.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665499.1	Assembled from SLRseq reads (SRP049776)
ENST00000439992.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653446.1	Assembled from SLRseq reads (SRP049776)
ENST00000654494.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654494.1	novel transcript
ENST00000662177.1	Assembled from SLRseq reads (SRP049776)
ENST00000665540.1	Assembled from SLRseq reads (SRP049776)
ENST00000656973.1	Assembled from SLRseq reads (SRP049776)
ENST00000445233.1	novel transcript
ENST00000670793.1	Assembled from SLRseq reads (SRP049776)
ENST00000346193.4	novel protein
ENST00000482930.1	ferritin, heavy polypeptide-like 17 (FTHL17) pseudogene
ENST00000412652.1	novel transcript
ENST00000275954.4	MANE_select
ENST00000275954.4	brain cell membrane protein 1 (BCMP1)
ENST00000445763.1	pseudogene similar to part of poly(A) polymerase alpha (PAPOLA)
ENST00000329357.6	MANE_select
ENST00000329357.6	novel protein (FLJ35782)
ENST00000427910.1	MAGE family pseudogene
ENST00000479411.1	novel protein similar to seven in absentia homolog 1 (Drosophila) (SIAH1)
ENST00000479411.1	possibly a pseudogene
ENST00000434731.1	nuclear transcription factor Y, gamma (NFYC) pseudogene
ENST00000399988.5	alternative 5' UTR
ENST00000399988.5	expression from this locus is supported by Chomez et al. (2001) Cancer Res. 61(14):5544-51
ENST00000399987.5	alternative 5' UTR
ENST00000399989.5	based on EGAG RT-PCR/RACE reactions sccd63205 and sccd64422  but contains a PCR artefact @ 3'end NB. these reads include mismatch that would result in premature stop codon
ENST00000399985.1	alternative 5' UTR
ENST00000378653.8	MANE_select
ENST00000378660.5	novel protein (FLJ36601)
ENST00000378660.5	upstream uORF
ENST00000446478.1	novel protein (LOC158730)
ENST00000447155.1	High mobility group protein 1 (HMG-1)(LOC340573) pseudogene
ENST00000455438.2	novel transcript
ENST00000419621.2	ribosomal protein S15a (RPS15A) pseudogene
ENST00000666628.1	Assembled from SLRseq reads (SRP049776)
ENST00000508758.1	H2A histone family B pseudogene
ENST00000358047.5	MANE_select
ENST00000446060.1	chromosome 2 open reading frame 6 (C2orf6) pseudogene
ENST00000466533.5	alternative 5' UTR
ENST00000484460.5	alternative 5' UTR
ENST00000378628.9	MANE_select
ENST00000449135.6	alternative 5' UTR
ENST00000378619.4	MANE_select
ENST00000378616.5	CAGE supported TSS
ENST00000378616.5	LR annotation
ENST00000378616.5	MANE_select
ENST00000378588.5	MANE_select
ENST00000378578.9	MANE_select
ENST00000341016.5	MANE_select
ENST00000448797.2	CAGE supported TSS
ENST00000297875.7	MANE_select
ENST00000378533.4	MANE_select
ENST00000378533.4	coninued from Em:AL133494.1 in Em:AL133494; continues as Em:AL121578.1.1 in Em:AL121578
ENST00000378533.4	sushi-repeat-containing protein, X chromosome
ENST00000479015.1	sushi-repeat-containing protein, X chromosome
ENST00000461865.1	sushi-repeat-containing protein, X chromosome
ENST00000423919.1	putative novel transcript
ENST00000642395.2	CAGE supported TSS
ENST00000642395.2	LR annotation
ENST00000642395.2	MANE_select
ENST00000645032.1	CAGE supported TSS
ENST00000645032.1	LR annotation
ENST00000039007.5	MANE_select
ENST00000039007.5	ornithine carbamoyltransferase
ENST00000488812.1	non canonical TEC
ENST00000445734.1	teratocarcinoma-derived growth factor (TDGF) pseudogene
ENST00000317902.7	Bcl2-associating athanogene (BAG1) pseudogene
ENST00000446400.1	ferritin, light polypeptide (FTL) pseudogene
ENST00000428234.1	upstream binding transcription factor, RNA polymerase I (UBTF) pseudogene
ENST00000378482.7	MANE_select
ENST00000669592.1	Assembled from SLRseq reads (SRP049776)
ENST00000614558.2	alternative 5' UTR
ENST00000457894.5	alternative 5' UTR
ENST00000378474.3	alternative 3' UTR
ENST00000448597.1	FLJ36359
ENST00000655040.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000648247.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000670107.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438867.1	novel transcript
ENST00000452570.1	glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene
ENST00000442125.2	ribosomal protein S11 (RPS11) pseudogene
ENST00000649640.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000447651.1	FLJ41764
ENST00000342274.8	alternative 5' UTR
ENST00000679513.1	alternative 5' UTR
ENST00000378444.9	LR annotation
ENST00000378444.9	MANE_select
ENST00000680831.1	alternative 5' UTR
ENST00000615339.2	alternative 5' UTR
ENST00000672922.2	alternative 5' UTR
ENST00000673391.1	alternative 5' UTR
ENST00000406200.4	alternative 5' UTR
ENST00000490976.5	BCL6 co-repressor
ENST00000412952.1	CAGE supported TSS
ENST00000412952.1	alternative 5' UTR
ENST00000653973.1	Assembled from SLRseq reads (SRP049776)
ENST00000418838.1	IMP (inosine monophosphate) dehydrogenase 1 (IMPDH1) pseudogene
ENST00000441098.2	pseudogene similar to part of ribosomal protein S20 (RPS20)
ENST00000636409.1	ATPase, H+ transporting, lysosomal interacting protein 2
ENST00000487051.2	ATPase, H+ transporting, lysosomal interacting protein 2
ENST00000637327.1	ATPase, H+ transporting, lysosomal interacting protein 2
ENST00000637526.1	alternative 5' UTR
ENST00000378438.9	NAGNAG splice site
ENST00000636251.1	NAGNAG splice site
ENST00000636580.2	ATPase, H+ transporting, lysosomal interacting protein 2
ENST00000636580.2	MANE_select
ENST00000486558.6	ATPase, H+ transporting, lysosomal interacting protein 2
ENST00000423649.2	ATPase, H+ transporting, lysosomal interacting protein 2
ENST00000636287.1	NAGNAG splice site
ENST00000479120.2	ATPase, H+ transporting, lysosomal interacting protein 2
ENST00000378426.5	novel protein (MGC39350)
ENST00000327877.10	MANE_select
ENST00000327877.10	novel protein (MGC39350)
ENST00000378421.1	novel protein (MGC39350)
ENST00000324817.6	MANE_select
ENST00000324817.6	cofactor required for Sp1 transcriptional activation, subunit 2
ENST00000416199.5	cofactor required for Sp1 transcriptional activation, subunit 2
ENST00000433003.1	cofactor required for Sp1 transcriptional activation, subunit 2
ENST00000472736.1	cofactor required for Sp1 transcriptional activation, subunit 2
ENST00000496531.2	cofactor required for Sp1 transcriptional activation, subunit 2
ENST00000482034.5	cofactor required for Sp1 transcriptional activation, subunit 2
ENST00000492219.1	cofactor required for Sp1 transcriptional activation, subunit 2
ENST00000495865.1	cofactor required for Sp1 transcriptional activation, subunit 2
ENST00000463072.1	cofactor required for Sp1 transcriptional activation, subunit 2
ENST00000416158.1	claudin-7 (CLDN7) pseudogene
ENST00000424288.1	fetal liver LKB1-interacting protein (FLIP1) pseudogene
ENST00000419629.1	syndecan binding protein 1 (syntenin) (SDCBP) pseudogene
ENST00000342691.5	Ribosomal protein L32 (RPL32) pseudogene
ENST00000397318.4	ribosomal protein S2 (RPS2) pseudogene
ENST00000661498.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000422221.1	chloride intracellular channel 4 (CLIC4) pseudogene
ENST00000378308.7	MANE_select
ENST00000452501.1	putative novel transcript
ENST00000395664.2	novel pseudogene
ENST00000629496.3	alternative 5' UTR
ENST00000629785.2	alternative 3' UTR
ENST00000630255.2	alternative 3' UTR
ENST00000630370.2	alternative 3' UTR
ENST00000478993.5	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3
ENST00000643821.1	CAGE supported TSS
ENST00000643821.1	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3
ENST00000644513.1	NAGNAG splice site
ENST00000642597.1	NAGNAG splice site
ENST00000644109.1	NAGNAG splice site
ENST00000645080.1	NAGNAG splice site
ENST00000645080.1	alternative 3' UTR
ENST00000645561.1	NAGNAG splice site
ENST00000644307.1	NAGNAG splice site
ENST00000642793.1	NAGNAG splice site
ENST00000644074.1	NAGNAG splice site
ENST00000644876.2	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3
ENST00000644876.2	MANE_select
ENST00000399959.7	NAGNAG splice site
ENST00000643963.1	NAGNAG splice site
ENST00000646223.1	NAGNAG splice site
ENST00000646319.1	NAGNAG splice site
ENST00000646319.1	NP_001180345.1
ENST00000645783.1	alternative 3' UTR
ENST00000542215.5	CAGE supported TSS
ENST00000542215.5	upstream ATG
ENST00000644073.1	CAGE supported TSS
ENST00000644073.1	NAGNAG splice site
ENST00000644073.1	alternative 5' UTR
ENST00000615313.5	CAGE supported TSS
ENST00000615313.5	alternative 5' UTR
ENST00000644677.1	NAGNAG splice site
ENST00000642322.1	alternative 5' UTR
ENST00000646107.1	NAGNAG splice site
ENST00000646107.1	alternative 5' UTR
ENST00000646627.1	alternative 5' UTR
ENST00000645380.1	NAGNAG splice site
ENST00000642424.1	CAGE supported TSS
ENST00000646679.1	CAGE supported TSS
ENST00000646679.1	NAGNAG splice site
ENST00000642763.1	NAGNAG splice site
ENST00000642801.1	NAGNAG splice site
ENST00000643820.1	NAGNAG splice site
ENST00000616050.3	NAGNAG splice site
ENST00000378220.2	CAGE supported TSS
ENST00000378220.2	MANE_select
ENST00000378220.2	alternative 5' UTR
ENST00000342595.2	nyctalopin
ENST00000486842.1	nyctalopin
ENST00000451718.1	gem (nuclear organelle) associated protein 7 (GEMIN7) pseudogene
ENST00000644347.1	calcium/calmodulin-dependent serine protein kinase (MAGUK family)(LIN2)
ENST00000378168.8	CAGE supported TSS
ENST00000378163.7	CAGE supported TSS
ENST00000378163.7	MANE_select
ENST00000378163.7	calcium/calmodulin-dependent serine protein kinase (MAGUK family)(LIN2)
ENST00000645566.1	calcium/calmodulin-dependent serine protein kinase (MAGUK family)(LIN2)
ENST00000378179.9	CAGE supported TSS
ENST00000378179.9	calcium/calmodulin-dependent serine protein kinase (MAGUK family)(LIN2)
ENST00000642499.1	align_id:3767735|asmbl_257900
ENST00000646087.2	align_id:1380774|asmbl_100677
ENST00000442742.7	calcium/calmodulin-dependent serine protein kinase (MAGUK family)(LIN2)
ENST00000378158.6	calcium/calmodulin-dependent serine protein kinase (MAGUK family)(LIN2)
ENST00000378154.3	calcium/calmodulin-dependent serine protein kinase (MAGUK family)(LIN2)
ENST00000646120.2	NP_001119526.1
ENST00000642641.1	align_id:3767739|asmbl_257904
ENST00000472704.3	calcium/calmodulin-dependent serine protein kinase (MAGUK family)(LIN2)
ENST00000642584.1	align_id:3767745|asmbl_257910
ENST00000643043.2	CAGE supported TSS
ENST00000643853.1	align_id:3767744|asmbl_257909
ENST00000643831.2	calcium/calmodulin-dependent serine protein kinase (MAGUK family)(LIN2)
ENST00000486402.1	CAGE supported TSS
ENST00000486402.1	calcium/calmodulin-dependent serine protein kinase (MAGUK family)(LIN2)
ENST00000644770.1	calcium/calmodulin-dependent serine protein kinase (MAGUK family)
ENST00000644770.1	calcium/calmodulin-dependent serine protein kinase (MAGUK family)(LIN2)
ENST00000477823.1	calcium/calmodulin-dependent serine protein kinase (MAGUK family)(LIN2)
ENST00000451126.1	putative novel transcript
ENST00000405276.2	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide (YWHAZ) pseudogene
ENST00000378142.9	G protein-coupled receptor 34 (GPCR)
ENST00000378142.9	MANE_select
ENST00000378138.5	G protein-coupled receptor 34 (GPCR)
ENST00000378138.5	NAGNAG splice site
ENST00000378138.5	alternative 5' UTR
ENST00000649219.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000649219.1	NAGNAG splice site
ENST00000649219.1	alternative 5' UTR
ENST00000302548.5	G protein-coupled receptor 82
ENST00000302548.5	MANE_select
ENST00000497180.1	G protein-coupled receptor 82
ENST00000451332.2	ribosomal protein S15a (RPS15A) pseudogene
ENST00000437466.1	putative novel transcript
ENST00000442175.1	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 1 (ATP5G1) pseudogene
ENST00000411782.2	pseudogene similar to part of ribosomal protein S4, X-linked (RPS4X)
ENST00000440002.1	novel transcript
ENST00000671190.1	Assembled from RACEseq reads
ENST00000378131.4	MANE_select
ENST00000440955.1	novel transcript
ENST00000445028.1	IMP (inosine monophosphate) dehydrogenase 1 (IMPDH1) pseudogene
ENST00000649774.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000338702.4	MANE_select
ENST00000338702.4	monoamine oxidase A
ENST00000497485.1	monoamine oxidase A
ENST00000490604.1	monoamine oxidase A
ENST00000378069.5	MANE_select
ENST00000378069.5	monoamine oxidase B
ENST00000487544.1	monoamine oxidase B
ENST00000468431.1	monoamine oxidase B
ENST00000642620.1	MANE_select
ENST00000647044.1	alternative 5' UTR
ENST00000470584.1	norrie disease (pseudoglioma)
ENST00000435093.1	novel transcript
ENST00000671493.1	Assembled from SLRseq reads (SRP049776)
ENST00000397254.2	RNA-binding region (RNP1, RRM) containing 2 (RNPC2) pseudogene
ENST00000420999.2	MANE_select
ENST00000420999.2	non canonical TEC
ENST00000443767.1	KIAA0218 pseudogene
ENST00000426279.1	ribonucleotide reductase M2 polypeptide (RRM2) pseudogene
ENST00000430261.1	ubinuclein 1 (UBN1) pseudogene
ENST00000378045.5	MANE_select
ENST00000378045.5	novel protein (MGC51029)
ENST00000483115.1	novel transcript
ENST00000415648.2	ribosomal protein L19 (RPL19) pseudogene
ENST00000412542.1	laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1) pseudogene
ENST00000339042.6	MANE_select
ENST00000339042.6	dual specificity phosphatase 21
ENST00000676343.1	long_read_pipeline_2
ENST00000675577.1	align_id:3767811|asmbl_257976
ENST00000675577.1	ubiquitously transcribed tetratricopeptide repeat gene, X chromosome
ENST00000674739.1	long_read_pipeline_2
ENST00000674867.1	long_read_pipeline_2
ENST00000676085.1	align_id:3767813|asmbl_257978
ENST00000674586.1	align_id:3767805|asmbl_257970
ENST00000674659.1	long_read_pipeline_2
ENST00000377967.9	ubiquitously transcribed tetratricopeptide repeat gene, X chromosome
ENST00000611820.5	427468
ENST00000611820.5	MANE_select
ENST00000611820.5	ubiquitously transcribed tetratricopeptide repeat gene, X chromosome
ENST00000675440.1	align_id:3767822|asmbl_257987
ENST00000475233.1	ubiquitously transcribed tetratricopeptide repeat gene, X chromosome
ENST00000675182.1	align_id:3767809|asmbl_257974
ENST00000675525.1	align_id:3767807|asmbl_257972
ENST00000414389.5	ubiquitously transcribed tetratricopeptide repeat gene, X chromosome
ENST00000675546.1	align_id:3767823|asmbl_257988
ENST00000676026.1	align_id:3767825|asmbl_257990
ENST00000485072.5	ubiquitously transcribed tetratricopeptide repeat gene, X chromosome
ENST00000484732.1	ubiquitously transcribed tetratricopeptide repeat gene, X chromosome
ENST00000431196.3	ubiquitously transcribed tetratricopeptide repeat gene, X chromosome
ENST00000479423.2	align_id:3767824|asmbl_257989
ENST00000398000.7	MANE_select
ENST00000398000.7	novel protein (FLJ30628, FLJ36695, FLJ32168)
ENST00000477281.1	novel protein (FLJ37558)
ENST00000377934.4	novel protein (FLJ14103)
ENST00000492138.1	novel transcript
ENST00000438181.5	novel transcript
ENST00000450527.5	novel transcript
ENST00000450246.1	novel transcript
ENST00000422979.1	transmembrane 4 superfamily member 11 (plasmolipin) (PMLP) pseudogene
ENST00000435394.5	novel transcript
ENST00000657646.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000422047.1	novel transcript
ENST00000671478.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657964.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000414254.1	keratin 8 (K8, KO, CK8, CYK8, K2C8, CARD2) (KRT8) pseudogene
ENST00000377927.3	novel pseudogene (GL004)
ENST00000602507.1	not organism-supported
ENST00000456532.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456532.2	novel transcript
ENST00000667331.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666464.1	Assembled from SLRseq reads (SRP049776)
ENST00000447169.1	pseudogene similar to part of splicing factor, arginine/serine-rich 6 (B52, SRP55) (SFRS6)
ENST00000420585.1	putative novel transcript
ENST00000433137.1	novel pseudogene
ENST00000392293.2	pseudogene similar to part of keratin 18 (K18, CYK18) (KRT18)
ENST00000397222.2	proliferating cell nuclear antigen (PCNA) pseudogene
ENST00000668280.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000658351.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670979.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670979.1	novel transcript
ENST00000660228.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000446884.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000417985.1	actin, beta (ACTB) pseudogene
ENST00000657405.1	Assembled from SLRseq reads (SRP049776)
ENST00000373465.2	catenin, beta like 1 (NAP, P14L, C20orf33, FLJ21108, NYD-SP19) (CTNNBL1) pseudogene
ENST00000425487.2	glyceraldehyde-3-phosphate dehydrogenase (G3PD, GAPDH) (GAPD) pseudogene
ENST00000377919.6	NP_001123371
ENST00000344302.9	MANE_select
ENST00000487081.1	alternative 3' UTR
ENST00000424779.1	transmembrane protein vezatin pseudogene
ENST00000523374.5	NP_001034980.1
ENST00000414387.6	NP_001139763
ENST00000657382.1	Assembled from SLRseq reads (SRP049776)
ENST00000421685.2	novel transcript
ENST00000276055.4	MANE_select
ENST00000276055.4	carbohydrate (N-acetylglucosamine 6-O) ulfotransferase 7 (C6ST-2)
ENST00000616978.5	MANE_select
ENST00000616978.5	genebuild_only_MANE
ENST00000328306.4	solute carrier family 9 (sodium/hydrogen exchanger), isoform 7 (NHE7)
ENST00000464933.5	solute carrier family 9 (sodium/hydrogen exchanger), isoform 7 (NHE7)
ENST00000491894.4	solute carrier family 9 (sodium/hydrogen exchanger), isoform 7 (NHE7)
ENST00000489574.2	solute carrier family 9 (sodium/hydrogen exchanger), isoform 7 (NHE7)
ENST00000421881.1	pseudogene similar to part of germ cell specific Y-box binding protein (YBX2)
ENST00000399931.2	novel pseudogene (HSPC177)
ENST00000218340.4	MANE_select
ENST00000218340.4	retinitis pigmentosa 2 (X-linked recessive)
ENST00000424392.5	alternative 5' UTR
ENST00000614628.5	MANE_select
ENST00000352078.8	regucalcin (senescence marker protein-30) (RC, SMP30)
ENST00000469346.1	regucalcin (senescence marker protein-30) (RC, SMP30)
ENST00000397180.6	MANE_select
ENST00000397180.6	genebuild_only_MANE
ENST00000336169.3	alternative 5' UTR
ENST00000336169.3	alternatively spliced 5' UTR, shares CDS with bK2522E6.1.1
ENST00000336169.3	regucalcin (senescence marker protein-30) (RC, SMP30)
ENST00000475448.1	regucalcin (senescence marker protein-30) (RC, SMP30)
ENST00000377811.4	MANE_select
ENST00000377811.4	neuronal protein 17.3 (P17.3)
ENST00000276062.8	neuronal protein 17.3 (P17.3)
ENST00000377604.8	MANE_select
ENST00000377604.8	RNA binding motif protein 10 (MGC997, MGC1132, DXS8237E, KIAA0122)
ENST00000496012.6	RNA binding motif protein 10 (MGC997, MGC1132, DXS8237E, KIAA0122)
ENST00000496012.6	non-canonical acceptor splice site at final exon
ENST00000478410.1	#RNA binding motif protein 10 (MGC997, MGC1132, DXS8237E, KIAA0122)
ENST00000456427.1	inositol 1,3,4-triphosphate 5/6 kinase (ITPK1) pseudogene
ENST00000377351.8	alternative 5' UTR
ENST00000377351.8	alternatively spliced 5' UTR, shares CDS with bK2522E6.5.1
ENST00000377351.8	ubiquitin-activating enzyme E1 (A1S9T and BN75 temperature sensitivity complementing) (A1S9, A1ST, GXP1, A1S9T, UBE1X, MGC4781)
ENST00000412206.5	alternative 5' UTR
ENST00000412206.5	alternatively spliced 5' UTR, shares CDS with bK2522E6.5.1 (partial)
ENST00000412206.5	ubiquitin-activating enzyme E1 (A1S9T and BN75 temperature sensitivity complementing) (A1S9, A1ST, GXP1, A1S9T, UBE1X, MGC4781)
ENST00000427561.5	ubiquitin-activating enzyme E1 (A1S9T and BN75 temperature sensitivity complementing) (A1S9, A1ST, GXP1, A1S9T, UBE1X, MGC4781)
ENST00000442035.5	ubiquitin-activating enzyme E1 (A1S9T and BN75 temperature sensitivity complementing) (A1S9, A1ST, GXP1, A1S9T, UBE1X, MGC4781)
ENST00000335972.11	MANE_select
ENST00000335972.11	ubiquitin-activating enzyme E1 (A1S9T and BN75 temperature sensitivity complementing) (A1S9, A1ST, GXP1, A1S9T, UBE1X, MGC4781)
ENST00000457753.5	ubiquitin-activating enzyme E1 (A1S9T and BN75 temperature sensitivity complementing) (A1S9, A1ST, GXP1, A1S9T, UBE1X, MGC4781)
ENST00000451702.2	ubiquitin-activating enzyme E1 (A1S9T and BN75 temperature sensitivity complementing) (A1S9, A1ST, GXP1, A1S9T, UBE1X, MGC4781)
ENST00000490869.1	ubiquitin-activating enzyme E1 (A1S9T and BN75 temperature sensitivity complementing) (A1S9, A1ST, GXP1, A1S9T, UBE1X, MGC4781)
ENST00000377269.3	ubiquitin-activating enzyme E1 (A1S9T and BN75 temperature sensitivity complementing) (A1S9, A1ST, GXP1, A1S9T, UBE1X, MGC4781)
ENST00000457458.6	NP_148978.2
ENST00000522883.1	alternative 5' UTR
ENST00000357227.9	MANE_select
ENST00000519758.5	alternative 5' UTR
ENST00000520893.5	alternative 5' UTR
ENST00000518391.5	alternative 5' UTR
ENST00000518022.5	alternative 5' UTR
ENST00000377107.7	CAGE supported TSS
ENST00000377107.7	MANE_select
ENST00000377107.7	upstream ATG
ENST00000423038.1	nicolin 1 (NICN1) pseudogene
ENST00000366224.2	putative novel transcript
ENST00000377073.4	MANE_select
ENST00000377073.4	zinc finger protein 157 (HZF22)
ENST00000442314.1	UBX domain containing 2 (UBXD2) pseudogene
ENST00000448027.1	nucleophosmin (NPM1) (nucleolar phosphoprotein B23, numatrin) pseudogene
ENST00000313116.11	zinc finger protein 41
ENST00000377065.8	alternative 5' UTR
ENST00000377065.8	zinc finger protein 41
ENST00000432977.1	zinc finger protein 41
ENST00000465311.1	zinc finger protein 41
ENST00000446295.1	chromosome 6 open reading frame 68 pseudogene (LOC286402)
ENST00000377045.9	MANE_select
ENST00000377045.9	non canonical polymorphism
ENST00000377045.9	v-raf murine sarcoma 3611 viral oncogene homolog 1
ENST00000377039.2	v-raf murine sarcoma 3611 viral oncogene homolog 1
ENST00000489496.1	v-raf murine sarcoma 3611 viral oncogene homolog 1
ENST00000469505.1	v-raf murine sarcoma 3611 viral oncogene homolog 1
ENST00000470206.1	v-raf murine sarcoma 3611 viral oncogene homolog 1
ENST00000295987.13	MANE_select
ENST00000295987.13	synapsin I
ENST00000340666.5	synapsin I
ENST00000456754.6	tissue inhibitor of metalloproteinase 1 (erythroid potentiating activity, collagenase inhibitor)
ENST00000218388.9	MANE_select
ENST00000218388.9	tissue inhibitor of metalloproteinase 1 (erythroid potentiating activity, collagenase inhibitor)
ENST00000377017.5	tissue inhibitor of metalloproteinase 1 (erythroid potentiating activity, collagenase inhibitor)
ENST00000441738.1	tissue inhibitor of metalloproteinase 1 (erythroid potentiating activity, collagenase inhibitor)
ENST00000445623.1	tissue inhibitor of metalloproteinase 1 (erythroid potentiating activity, collagenase inhibitor)
ENST00000396992.8	MANE_select
ENST00000480317.1	NMD likely if extended
ENST00000247161.7	ELK1, member of ETS oncogene family
ENST00000376983.8	ELK1, member of ETS oncogene family
ENST00000376983.8	alternative 5' UTR
ENST00000343894.8	ELK1, member of ETS oncogene family
ENST00000468956.1	ELK1, member of ETS oncogene family
ENST00000335890.3	MANE_select
ENST00000335890.3	ubiquitously-expressed transcript
ENST00000333119.7	ubiquitously-expressed transcript
ENST00000460840.5	ubiquitously-expressed transcript
ENST00000485641.5	ubiquitously-expressed transcript
ENST00000376964.3	ubiquitously-expressed transcript
ENST00000664698.1	Assembled from SLRseq reads (SRP049776)
ENST00000670339.1	Assembled from SLRseq reads (SRP049776)
ENST00000658400.1	Assembled from SLRseq reads (SRP049776)
ENST00000669654.1	Assembled from SLRseq reads (SRP049776)
ENST00000483225.5	FLJ36789
ENST00000483225.5	novel protein (LOC286403)
ENST00000436365.1	spermine synthase pseudogene
ENST00000439330.1	C2H2 type zinc finger pseudogene
ENST00000444248.1	WAS protein family member 2 (WASF2) pseudogene (LOC286404)
ENST00000338637.13	MANE_select
ENST00000376954.6	zinc finger protein 81 (HFZ20)
ENST00000423238.1	ribosomal protein L7 (RPL7) pseudogene
ENST00000376943.8	MANE_select
ENST00000396965.5	FLJ16508
ENST00000276054.9	MANE_select
ENST00000276054.9	alternative 5' UTR
ENST00000442455.8	novel KRAB box containing C2H2 type zinc finger protein (FLJ20573)
ENST00000428686.1	alternative 5' UTR
ENST00000421903.1	alternative 5' UTR
ENST00000376940.3	novel protein similar to lysozyme C (1,4-beta-N-acetylmuramidase)
ENST00000668079.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000376932.3	not best-in-genome evidence
ENST00000376932.3	submitted as a TPA:BK000686.1
ENST00000376932.3	synovial sarcoma, X breakpoint 6
ENST00000304270.5	novel protein similar to lysozyme C (1,4-beta-N-acetylmuramidase)
ENST00000421152.1	zinc finger protein 21 (ZNF21) pseudogene
ENST00000448031.1	ornithine aminotransferase (gyrate atrophy) (OAT) pseudogene
ENST00000442971.1	synovial sarcoma, X breakpoint 2 (SSX2) pseudogene
ENST00000440265.1	S100 calcium binding protein A11 (calgizzarin)(S100A11) pseudogene
ENST00000311798.5	synovial sarcoma, X breakpoint 5
ENST00000347757.6	MANE_select
ENST00000347757.6	synovial sarcoma, X breakpoint 5
ENST00000403001.3	synovial sarcoma, X breakpoint 5
ENST00000437312.1	ornithine aminotransferase (gyrate atrophy)(OAT) pseudogene
ENST00000433276.1	synovial sarcoma, X breakpoint 5 (SSX5) pseudogene
ENST00000429428.1	S100 calcium binding protein A11 (calgizzarin) (S100A11) pseudogene
ENST00000441060.2	ornithine aminotransferase (gyrate atrophy)(OAT) pseudogene
ENST00000376919.4	MANE_select
ENST00000376919.4	synovial sarcoma, X breakpoint 1
ENST00000433189.1	S100 calcium binding protein A11 (calgizzarin) (S100A11) pseudogene
ENST00000445444.1	ornithine aminotransferase (gyrate atrophy) pseudogene
ENST00000376909.6	synovial sarcoma, X breakpoint 9
ENST00000453735.1	ornithine aminotransferase (gyrate atrophy) (OAT) pseudogene
ENST00000422410.1	putative novel transcript
ENST00000298396.7	MANE_select
ENST00000298396.7	synovial sarcoma, X breakpoint 3
ENST00000376895.2	synovial sarcoma, X breakpoint 3
ENST00000376893.7	synovial sarcoma, X breakpoint 3
ENST00000452266.1	ornithine aminotransferase (gyrate atrophy) (OAT) pseudogene
ENST00000433136.1	pseudogene similar to part of ornithine aminotransferase (gyrate atrophy) (OAT)
ENST00000413071.1	ornithine aminotransferase (gyrate atrophy) (OAT) pseudogene
ENST00000595689.3	MANE_select
ENST00000415467.1	ornithine aminotransferase (gyrate atrophy) (OAT) pseudogene
ENST00000423117.1	similar to part of the ornithine aminotransferase (OAT) pseudogene
ENST00000441624.1	synovial sarcoma, X breakpoint (SSX) pseudogene
ENST00000457562.1	ornithine aminotransferase (gyrate atrophy) (OAT) pseudogene
ENST00000620913.5	MANE_select
ENST00000620913.5	genebuild_only_MANE
ENST00000497336.1	solute carrier family 38, member 5
ENST00000480105.1	solute carrier family 38, member 5
ENST00000440085.5	alternative 5' UTR
ENST00000441948.5	alternative 5' UTR
ENST00000413668.5	alternative 5' UTR
ENST00000416711.5	alternative 5' UTR
ENST00000488083.5	alternative 5' UTR
ENST00000429543.2	alternative 5' UTR
ENST00000492562.5	FtsJ homolog 1 (E. coli)
ENST00000019019.6	FtsJ homolog 1 (E. coli)
ENST00000348411.3	FtsJ homolog 1 (E. coli)
ENST00000348411.3	MANE_select
ENST00000485486.1	FtsJ homolog 1 (E. coli)
ENST00000473235.5	FtsJ homolog 1 (E. coli)
ENST00000487353.5	FtsJ homolog 1 (E. coli)
ENST00000490202.5	FtsJ homolog 1 (E. coli)
ENST00000496365.5	FtsJ homolog 1 (E. coli)
ENST00000466371.5	FtsJ homolog 1 (E. coli)
ENST00000467954.5	FtsJ homolog 1 (E. coli)
ENST00000475806.5	FtsJ homolog 1 (E. coli)
ENST00000489599.1	FtsJ homolog 1 (E. coli)
ENST00000445586.1	novel transcript
ENST00000326194.11	CAGE supported TSS
ENST00000326194.11	MANE_select
ENST00000489940.5	alternative 5' UTR
ENST00000276096.10	emopamil binding protein (sterol isomerase)
ENST00000498425.1	emopamil binding protein (sterol isomerase)
ENST00000495186.6	MANE_select
ENST00000495186.6	emopamil binding protein (sterol isomerase)
ENST00000446158.5	emopamil binding protein (sterol isomerase)
ENST00000651615.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000376771.9	MANE_select
ENST00000376771.9	ornithine aminotransferase-like 1
ENST00000481090.6	ornithine aminotransferase-like 1
ENST00000494495.1	ornithine aminotransferase-like 1
ENST00000476141.1	ornithine aminotransferase-like 1
ENST00000418627.1	ornithine aminotransferase-like 1
ENST00000376775.3	CAGE supported TSS
ENST00000472897.5	RNA binding motif protein 3
ENST00000488216.5	RNA binding motif protein 3
ENST00000376759.8	MANE_select
ENST00000376759.8	RNA binding motif protein 3
ENST00000466764.5	RNA binding motif protein 3
ENST00000490127.5	novel transcript
ENST00000491240.5	RNA binding motif protein 3, variant 3, alternatively spliced
ENST00000489344.5	RNA binding motif protein 3
ENST00000485213.1	RNA binding motif protein 3
ENST00000491236.1	RNA binding motif protein 3
ENST00000354480.2	RNA binding motif protein 3, variant 2, alternatively spliced in 5' UTR
ENST00000453810.1	novel transcript
ENST00000406301.1	mitochondrial ribosomal protein L32 (MRPL32) pseudogene
ENST00000470124.1	WD repeat domain 13
ENST00000218056.9	alternative 5' UTR
ENST00000376729.10	MANE_select
ENST00000376729.10	alternative 3' UTR
ENST00000486125.5	alternative 5' UTR
ENST00000472440.1	WD repeat domain 13
ENST00000492715.1	WD repeat domain 13
ENST00000466962.1	WD repeat domain 13
ENST00000495575.1	WD repeat domain 13
ENST00000492873.1	WD repeat domain 13
ENST00000438988.1	vomeronasal receptor pseudogene
ENST00000450772.5	Wiskott-Aldrich syndrome (eczema-thrombocytopenia), vaviant 3
ENST00000376701.5	MANE_select
ENST00000376701.5	Wiskott-Aldrich syndrome (eczema-thrombocytopenia), vaviant 1
ENST00000465982.5	Wiskott-Aldrich syndrome (eczema-thrombocytopenia), vaviant 7
ENST00000483750.5	Wiskott-Aldrich syndrome (eczema-thrombocytopenia), vaviant 4
ENST00000490627.1	Wiskott-Aldrich syndrome (eczema-thrombocytopenia), vaviant 5
ENST00000474174.1	Wiskott-Aldrich syndrome (eczema-thrombocytopenia), vaviant 6
ENST00000470107.1	Wiskott-Aldrich syndrome (eczema-thrombocytopenia)
ENST00000376687.4	MANE_select
ENST00000376687.4	suppressor of variegation 3-9 (Drosophila) homolog 1
ENST00000482260.1	novel transcript
ENST00000416061.1	novel transcript
ENST00000303227.11	MANE_select
ENST00000303227.11	genebuild_only_MANE
ENST00000463327.1	novel transcript
ENST00000470676.1	novel transcript
ENST00000445229.1	novel protein
ENST00000419045.1	acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase) (ACAA2) pseudogene
ENST00000376665.4	GATA-binding protein 1 (globin transcription factor 1)
ENST00000376670.9	GATA-binding protein 1 (globin transcription factor 1)
ENST00000376670.9	MANE_select
ENST00000423941.5	alternative 5' UTR
ENST00000438518.5	alternative 5' UTR
ENST00000376643.6	alternative 5' UTR
ENST00000376610.6	alternative 5' UTR
ENST00000376619.6	alternative 5' UTR
ENST00000334136.11	MANE_select
ENST00000643374.1	alternative 5' UTR
ENST00000644068.1	CAGE supported TSS
ENST00000644068.1	LR annotation
ENST00000644068.1	alternative 5' UTR
ENST00000441703.6	alternative 5' UTR
ENST00000489352.5	alternative 5' UTR
ENST00000443563.5	alternative 5' UTR
ENST00000440653.1	alternative 5' UTR
ENST00000486227.5	FLJ45175
ENST00000498808.6	NMD likely if extended
ENST00000488543.1	FLJ16239
ENST00000636362.1	MANE_select
ENST00000338270.1	alternative 5' UTR
ENST00000218230.6	MANE_select
ENST00000651767.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000651767.1	alternative 5' UTR
ENST00000651767.1	upstream uORF
ENST00000447146.7	MANE_select
ENST00000447146.7	polyglutamine binding protein 1 (nuclear protein containing WW domain 38 kD, NPW38)
ENST00000473764.5	novel transcript, variant 8, alternatively spliced 3' UTR. Translation is Em:AF207550.2.1
ENST00000247140.8	polyglutamine binding protein 1 (nuclear protein containing WW domain 38 kD, NPW38)
ENST00000472742.5	novel transcript
ENST00000486150.5	novel transcript
ENST00000477997.5	novel transcript, variant 5, alternatively spliced 5' UTR. Translation is Em:AF207550.2.1
ENST00000470062.5	novel transcript
ENST00000474671.5	novel transcript, variant 6, alternatively spliced 5' UTR. Translation is Em:AF207550.2.1
ENST00000443648.5	polyglutamine binding protein 1 (nuclear protein containing WW domain 38 kD, NPW38)
ENST00000456306.1	polyglutamine binding protein 1 (nuclear protein containing WW domain 38 kD, NPW38)
ENST00000463529.4	polyglutamine binding protein 1 (nuclear protein containing WW domain 38 kD, NPW38)
ENST00000470059.5	novel transcript, variant 4, alternatively spliced 3' UTR. translation is Em:AF207550.2.3
ENST00000465859.2	novel transcript, variant 7, C-terminal truncated
ENST00000465150.6	NP_001161419.1
ENST00000376582.7	translocase of inner mitochondrial membrane 17 homolog B (yeast), variante 1
ENST00000376582.7	translocase of inner mitochondrial membrane 17 homolog B; inner mitochondrial membrane preprotein translocase
ENST00000466995.5	novel transcript
ENST00000466995.5	translocase of inner mitochondrial membrane 17 homolog B (yeast)
ENST00000495490.6	novel transcript
ENST00000495490.6	translocase of inner mitochondrial membrane 17 homolog B (yeast)
ENST00000247138.11	MANE_select
ENST00000247138.11	solute carrier family 35 (UDP-galactose transporter), member 2
ENST00000376529.8	NP_001269576.1
ENST00000376529.8	solute carrier family 35 (UDP-galactose transporter), member 2
ENST00000376521.6	solute carrier family 35 (UDP-galactose transporter), member 2
ENST00000445167.7	solute carrier family 35 (UDP-galactose transporter), member 2
ENST00000376515.8	NP_001269577.1
ENST00000376515.8	solute carrier family 35 (UDP-galactose transporter), member 2
ENST00000616181.5	NP_001269579.1
ENST00000446885.1	solute carrier family 35 (UDP-galactose transporter), member 2
ENST00000376512.2	solute carrier family 35 (UDP-galactose transporter), member 2
ENST00000376509.4	MANE_select
ENST00000376509.4	pim-2 oncogene
ENST00000485431.1	pim-2 oncogene
ENST00000442430.1	pim-2 oncogene
ENST00000376488.8	MANE_select
ENST00000376488.8	novel OTU-like cysteine protease
ENST00000455452.5	novel OTU-like cysteine protease
ENST00000156084.8	novel OTU-like cysteine protease
ENST00000428668.2	NP_001129631
ENST00000484499.5	novel transcript
ENST00000481142.1	novel transcript
ENST00000376477.5	potassium voltage-gated channel, Shal-related subfamily, member 1
ENST00000218176.4	MANE_select
ENST00000218176.4	potassium voltage-gated channel, Shal-related subfamily, member 1
ENST00000419374.1	potassium voltage-gated channel, Shal-related subfamily, member 1
ENST00000376423.8	MANE_select
ENST00000617369.4	alternative 5' UTR
ENST00000315869.8	MANE_select
ENST00000597275.5	alternative 5' UTR
ENST00000496529.6	alternative 5' UTR
ENST00000603986.6	MANE_select
ENST00000603986.6	NP_001156793
ENST00000536628.3	NP_001156795.1
ENST00000482476.1	JM11 protein
ENST00000482476.1	Putative variant 2
ENST00000553851.3	MANE_select
ENST00000376386.3	JM4 protein (JM4)
ENST00000376372.9	MANE_select
ENST00000634944.1	alternative 5' UTR
ENST00000356463.7	NAGNAG splice site
ENST00000473974.5	Genoscope mRNA only
ENST00000473974.5	confirm experimentally
ENST00000376368.7	NAGNAG splice site
ENST00000376368.7	alternative 5' UTR
ENST00000475880.6	NAGNAG splice site
ENST00000471338.6	alternative 5' UTR
ENST00000465382.6	alternative 5' UTR
ENST00000634849.1	NAGNAG splice site
ENST00000634849.1	downstream ATG
ENST00000636049.1	alternative 5' UTR
ENST00000636645.1	alternative 5' UTR
ENST00000156109.7	MANE_select
ENST00000156109.7	T54 protein, transcript variant 1
ENST00000615626.4	NP_001093151
ENST00000614074.4	NP_001093152
ENST00000595224.5	NP_079135
ENST00000376327.6	MANE_select
ENST00000376327.6	Proteolipid protein 2 (colonic epithelium-enriched), protein variant 1n
ENST00000376322.7	Proteolipid protein 2 (colonic epithelium-enriched), protein variant 2
ENST00000599218.6	MANE_select
ENST00000432913.5	alternative 5' UTR
ENST00000263233.9	MANE_select
ENST00000479808.5	alternative 3' UTR
ENST00000433499.1	novel transcript
ENST00000323022.10	MANE_select
ENST00000448722.1	heat shock 27kDa protein 1 (HSPB1) pseudogene
ENST00000376227.4	JM1 protein (JM1)
ENST00000376227.4	MANE_select
ENST00000496651.5	novel transcript
ENST00000490300.1	novel transcript
ENST00000376207.10	MANE_select
ENST00000376207.10	forkhead box P3
ENST00000376199.7	NP_001107849.1
ENST00000376197.1	forkhead box P3
ENST00000557224.6	confirm experimentally
ENST00000650877.1	alternative 5' UTR
ENST00000055335.11	MANE_select
ENST00000466508.5	alternative 5' UTR
ENST00000495799.5	alternative 5' UTR
ENST00000652102.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000652581.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000407599.3	GAGE10-001
ENST00000407599.3	non canonical polymorphism
ENST00000407599.3	not best-in-genome evidence
ENST00000442437.2	G antigen family protein similar to GAGE4
ENST00000381751.1	G antigen family protein
ENST00000361446.5	G antigen family protein
ENST00000405679.3	G antigen family protein similar to GAGE7B
ENST00000440137.1	G antigen family protein similar to GAGE7B
ENST00000381698.3	G antigen family protein similar to GAGE7B
ENST00000362097.1	G antigen 2
ENST00000381700.10	NP_001035753.1
ENST00000423609.1	voltage-dependent anion channel 1 (VDAC1) pseudogene
ENST00000438101.1	sal-like 1 (Drosophila) (SALL1) pseudogene
ENST00000376150.4	MANE_select
ENST00000376141.5	G antigen family C 1 protein (Prostate-associated gene protein 4) (PAGE-4) (PAGE-1) (JM27) (GAGE-9)
ENST00000218068.7	G antigen family C 1 protein (Prostate-associated gene protein 4) (PAGE-4) (PAGE-1) (JM27) (GAGE-9)
ENST00000218068.7	MANE_select
ENST00000478785.1	G antigen family C 1 protein (Prostate-associated gene protein 4) (PAGE-4) (PAGE-1) (JM27) (GAGE-9)
ENST00000474146.1	G antigen family C 1 protein (Prostate-associated gene protein 4) (PAGE-4) (PAGE-1) (JM27) (GAGE-9)
ENST00000621775.2	MANE_select
ENST00000402231.1	Pseudogene similar to part of the cleavage and polyadenylation specificity factor (CPSF 160 KDa subunit)
ENST00000376091.8	MANE_select
ENST00000376091.8	alternative 5' UTR
ENST00000482218.2	Novel transcript
ENST00000376108.7	alternative 5' UTR
ENST00000376108.7	chloride channel 5 (nephrolithiasis 2, X-linked, Dent disease)
ENST00000642885.1	CAGE supported TSS
ENST00000642885.1	alternative 5' UTR
ENST00000307367.2	chloride channel 5 (nephrolithiasis 2, X-linked, Dent disease)
ENST00000376064.7	A kinase (PRKA) anchor protein 4
ENST00000481402.5	A kinase (PRKA) anchor protein 4
ENST00000358526.7	A kinase (PRKA) anchor protein 4
ENST00000358526.7	MANE_select
ENST00000448865.5	A kinase (PRKA) anchor protein 4
ENST00000437370.2	A kinase (PRKA) anchor protein 4
ENST00000480926.1	A kinase (PRKA) anchor protein 4
ENST00000493507.5	cyclin B3
ENST00000491907.5	cyclin B3
ENST00000376042.6	MANE_select
ENST00000376042.6	cyclin B3
ENST00000376038.5	cyclin B3
ENST00000476167.5	cyclin B3
ENST00000611977.2	MANE_select
ENST00000376020.8	alternative 3' UTR
ENST00000289292.11	NMD exception
ENST00000289292.11	NP_065768
ENST00000475267.1	H3 histone family 3B (H3F3B) pseudogene
ENST00000252677.4	MANE_select
ENST00000252677.4	bone morphogenetic protein 15
ENST00000453854.1	high-mobility group box 1 (HMGB1) pseudogene
ENST00000439389.1	melanoma antigen pseudogene
ENST00000447309.1	pseudogene similar to part of SAH (SA hypertension-associated homolog (rat))
ENST00000659896.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668331.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000442994.1	novel transcript
ENST00000669956.1	Assembled from SLRseq reads (SRP049776)
ENST00000666173.1	Assembled from SLRseq reads (SRP049776)
ENST00000665808.1	Assembled from SLRseq reads (SRP049776)
ENST00000428996.1	melanoma antigen pseudogene
ENST00000425150.2	Assembled from SLRseq reads (SRP049776)
ENST00000425150.2	novel transcript
ENST00000670564.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000376006.7	alternative 5' UTR
ENST00000376006.7	alternatively spliced 5' UTR; shares CDS with bA348F1.4.2
ENST00000376006.7	nudix (nucleoside diphosphate linked moiety X)-type motif 10
ENST00000356450.3	MANE_select
ENST00000661364.1	Assembled from SLRseq reads (SRP049776)
ENST00000418775.1	putative novel transcript
ENST00000455931.1	putative novel transcript
ENST00000342995.4	CAGE supported TSS
ENST00000342995.4	MANE_select
ENST00000375992.4	MANE_select
ENST00000375992.4	nudix (nucleoside diphosphate linked moiety X)-type motif 11
ENST00000656579.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000448761.1	putative novel transcript
ENST00000417339.4	CAGE supported TSS
ENST00000417339.4	MANE_select
ENST00000417339.4	upstream ATG
ENST00000634648.1	MANE_select
ENST00000491883.1	pseudogene similar to part of p30 (nuclear protein p30)
ENST00000602548.2	MANE_select
ENST00000340438.6	G1 to S phase transition 2
ENST00000340438.6	MANE_select
ENST00000375772.7	alternative 5' UTR
ENST00000375772.7	alternative 5' UTR; shares CDS with bA234P3.1.1 and bA234P3.1.5
ENST00000375772.7	melanoma antigen, family D, 1
ENST00000375722.5	alternative 5' UTR
ENST00000375722.5	alternative 5' UTR; shares CDS with bA234P3.1.1 and bA234P3.1.2
ENST00000375722.5	melanoma antigen, family D, 1
ENST00000326587.12	MANE_select
ENST00000326587.12	alternative 5' UTR; shares CDS with bA234P3.1.2 and bA234P3.1.5
ENST00000326587.12	melanoma antigen, family D, 1
ENST00000375695.2	melanoma antigen, family D, 1
ENST00000470461.1	melanoma antigen, family D, 1
ENST00000494718.5	melanoma antigen, family D, 1
ENST00000485420.5	melanoma antigen, family D, 1
ENST00000482188.1	melanoma antigen, family D, 1
ENST00000482599.1	melanoma antigen, family D, 1
ENST00000473931.1	melanoma antigen, family D, 1
ENST00000422654.1	zinc finger protein pseudogene
ENST00000428250.1	pseudogene similar to part of PFKFB1 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1)
ENST00000442031.1	pseudogene similar to part of IPO7 (importin 7)
ENST00000451170.1	ubiquinol-cytochrome c reductase complex (7.2 kD) (HSPC051) pseudogene
ENST00000411928.1	thiopurine S-methyltransferase (TMPT) pseudogene
ENST00000375644.3	novel protein (LOC349420,LOC256106)
ENST00000497164.5	alternative 5' UTR
ENST00000471932.5	novel transcript
ENST00000459685.5	novel transcript
ENST00000375626.7	melanoma antigen, family D, 4 (MAGED4)
ENST00000477634.5	novel transcript
ENST00000498483.5	novel transcript
ENST00000467526.1	novel transcript
ENST00000467526.1	this variant and one of variant fragments .1.7, .1.10 or .1.11 could be part of a single variant
ENST00000474812.1	novel transcript
ENST00000474812.1	this variant and one of variant fragments .1.7, .1.10 or .1.11 could be part of a single variant
ENST00000479281.5	novel transcript, variant 7 (FLJ37222)
ENST00000479281.5	this variant and one of variant fragments .1.8 and .1.9 could be part of a single variant
ENST00000497416.1	novel transcript
ENST00000497416.1	this variant and one of variant fragments .1.8 and .1.9 could be part of a single variant
ENST00000497348.1	novel transcript
ENST00000497348.1	this variant and one of variant fragments .1.8 and .1.9 could be part of a single variant
ENST00000669760.1	Assembled from SLRseq reads (SRP049776)
ENST00000660762.1	Assembled from SLRseq reads (SRP049776)
ENST00000654180.1	Assembled from SLRseq reads (SRP049776)
ENST00000375625.3	novel protein (LOC349420) (FLJ39060)
ENST00000286049.3	MANE_select
ENST00000438584.1	GAGE family member pseudogene
ENST00000456973.2	pseudogene similar to part of the GAGE family of proteins
ENST00000515651.1	GAGE family member pseudogene
ENST00000518075.1	alternative 5' UTR
ENST00000375616.1	isoform 1b
ENST00000375613.3	isoform 1d
ENST00000375602.1	antigen G family member
ENST00000375602.1	probable duplication of the GAGED2 gene
ENST00000375602.1	translation is the same as bA485B17.5.1 in Em:BX088602
ENST00000415263.1	novel pseudogene
ENST00000413031.1	pseudogene similar to part of GAGE family of proteins
ENST00000440881.1	GAGE family member pseudogene
ENST00000412941.1	GAGE family member pseudogene
ENST00000456052.1	GAGE family member pseudogene
ENST00000440734.1	GAGE family member pseudogene
ENST00000440546.1	novel pseudogene
ENST00000438586.1	novel pseudogene
ENST00000478767.1	EST evidence align in multiple positions and hit with 100% identity other loci in clone BX088602.5 on chromosome X (according to UCSC and BLAT)
ENST00000375570.1	antigen G family member
ENST00000375570.1	probable duplication of the GAGED2 gene
ENST00000375570.1	same translation as bA485B17.5.1 in Em:BX088602
ENST00000442891.1	novel pseudogene
ENST00000417920.1	GAGE family member pseudogene
ENST00000422168.1	GAGE family member pseudogene
ENST00000453640.1	synovial sarcoma, X breakpoint 3 (SSX3) pseudogene
ENST00000453276.1	ornithine aminotransferase (gyrate atrophy) (OAT) pseudogene
ENST00000298181.6	MANE_select
ENST00000298181.6	not best-in-genome evidence
ENST00000298181.6	synovial sarcoma, X breakpoint 7
ENST00000450868.1	ornithine aminotransferase (gyrate atrophy) (OAT) pseudogene
ENST00000443473.1	synovial sarcoma, X breakpoint 4 (SSX4) pseudogene
ENST00000440592.1	S100 calcium binding protein A11 (calgizzarin) (S100A11) pseudogene
ENST00000336777.9	synovial sarcoma, X breakpoint 2
ENST00000337502.5	synovial sarcoma, X breakpoint 2
ENST00000476392.1	synovial sarcoma, X breakpoint 2
ENST00000435089.1	ornithine aminotransferase (gyrate atrophy) (OAT) pseudogene
ENST00000454598.1	pseuodgene similar to part of ornithine aminotransferase (gyrate atrophy) (OAT)
ENST00000443639.2	pseudogene similar to part of ornithine aminotransferase (gyrate atrophy) (OAT)
ENST00000453703.1	ornithine aminotransferase (gyrate atrophy) (OAT) pseudogene
ENST00000596480.6	MANE_select
ENST00000596480.6	novel protein similar to synovial sarcoma X breakpoint 2 (SSX2)
ENST00000434905.1	SSX family pseudogene
ENST00000375511.4	MANE_select
ENST00000375511.4	not best-in-genome evidence
ENST00000452829.1	pseudogene similar to part of G antigen protein
ENST00000375501.1	not best-in-genome evidence
ENST00000502642.1	GAGE family pseudogene
ENST00000458691.1	eukaryotic translation initiation factor 4A (EIF4A2) pseudogene
ENST00000375491.7	alternative 5' UTR
ENST00000346279.4	MANE_select
ENST00000346279.4	placenta-specific 6 (XAGE-3, pp9012)
ENST00000610405.4	alternative 5' UTR
ENST00000619346.4	alternative 5' UTR
ENST00000610609.4	alternative 5' UTR
ENST00000612188.4	alternative 5' UTR
ENST00000616419.4	alternative 5' UTR
ENST00000416841.7	MANE_select
ENST00000416841.7	alternative 5' UTR
ENST00000509613.1	alternative 5' UTR
ENST00000650740.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000622447.4	alternative 5' UTR
ENST00000611661.4	alternative 5' UTR
ENST00000596733.7	alternative 5' UTR
ENST00000612846.4	alternative 5' UTR
ENST00000622197.4	alternative 5' UTR
ENST00000619373.4	alternative 5' UTR
ENST00000622732.4	alternative 5' UTR
ENST00000619518.4	alternative 5' UTR
ENST00000618601.4	alternative 5' UTR
ENST00000622323.4	alternative 5' UTR
ENST00000612083.4	alternative 5' UTR
ENST00000619586.4	alternative 5' UTR
ENST00000610625.4	alternative 5' UTR
ENST00000332582.5	MANE_select
ENST00000375466.2	alternative 5' UTR
ENST00000553557.5	non canonical conserved
ENST00000375442.8	MANE_select
ENST00000579390.1	not organism-supported
ENST00000578306.5	non canonical conserved
ENST00000433646.1	putative novel transcript
ENST00000366185.2	novel transcript
ENST00000433923.1	ribosomal protein L27 (RPL27) pseudogene
ENST00000428275.1	actin, beta (ACTB) pseudogene
ENST00000421137.2	pseudogene similar to part of suppressor of variegation 3-9 homolog 2 (SUV39H2)
ENST00000375401.8	MANE_select
ENST00000412242.1	putative novel transcript
ENST00000642864.1	LR annotation
ENST00000642864.1	MANE_select
ENST00000642864.1	NP_001104595.1
ENST00000375365.2	CAGE supported TSS
ENST00000375365.2	novel protein (KIAA0522)
ENST00000638630.1	CAGE supported TSS
ENST00000498281.2	CAGE supported TSS
ENST00000639161.2	CAGE supported TSS
ENST00000639161.2	NP_001230126.1
ENST00000485377.5	CAGE supported TSS
ENST00000675731.1	CHS.58074.35
ENST00000638583.1	CAGE supported TSS
ENST00000432596.2	laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1) pseudogene
ENST00000448956.1	ribosomal protein S13 (RPS13) pseudogene
ENST00000454989.1	novel pseudogene
ENST00000322213.9	MANE_select
ENST00000375340.10	SMC1 structural maintenance of chromosomes 1-like 1 (yeast)
ENST00000470241.2	SMC1 structural maintenance of chromosomes 1-like 1 (yeast)
ENST00000469129.1	SMC1 structural maintenance of chromosomes 1-like 1 (yeast)
ENST00000463684.1	SMC1 structural maintenance of chromosomes 1-like 1 (yeast)
ENST00000329209.9	novel RIB43A domain containing protein. variant 3
ENST00000375327.6	MANE_select
ENST00000375327.6	novel RIB43A domain containing protein
ENST00000457095.5	novel RIB43A domain containing protein (FLJ32783)
ENST00000490702.1	putative novel transcript
ENST00000477706.1	hydroxyacyl-Coenzyme A dehydrogenase, type II
ENST00000375304.9	hydroxyacyl-Coenzyme A dehydrogenase, type II
ENST00000168216.11	MANE_select
ENST00000168216.11	hydroxyacyl-Coenzyme A dehydrogenase, type II
ENST00000375298.4	hydroxyacyl-Coenzyme A dehydrogenase, type II
ENST00000495986.1	hydroxyacyl-Coenzyme A dehydrogenase, type II
ENST00000418049.1	putative novel transcript
ENST00000425348.1	novel pseudogene (FLJ20516)
ENST00000262854.11	MANE_select
ENST00000262854.11	genebuild_only_MANE
ENST00000488459.1	upstream regulatory element binding protein 1 (UREB1)
ENST00000474971.1	upstream regulatory element binding protein 1 (UREB1)
ENST00000480438.1	upstream regulatory element binding protein 1 (UREB1)
ENST00000463852.1	upstream regulatory element binding protein 1 (UREB1)
ENST00000474288.1	upstream regulatory element binding protein 1 (UREB1)
ENST00000218328.12	NMD likely if extended
ENST00000489876.1	upstream regulatory element binding protein 1 (UREB1)
ENST00000471676.1	upstream regulatory element binding protein 1 (UREB1)
ENST00000446750.1	alternative 5' UTR
ENST00000432417.1	pseudogene similar to part of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 (PFKFB1)
ENST00000458382.2	pseudogene similar to part of ribosomal protein S13 (RPS13)
ENST00000428215.2	mitochondrial ribosomal protein L32 (MRPL32) pseudogene
ENST00000455300.1	mitochondrial ribosomal protein S18C (MRPS18C) pseudogene
ENST00000357988.9	KIAA1111
ENST00000338154.11	CAGE supported TSS
ENST00000338154.11	MANE_select
ENST00000425862.5	alternative 5' UTR
ENST00000437224.5	alternative 5' UTR
ENST00000415025.5	alternative 5' UTR
ENST00000453905.5	alternative 5' UTR
ENST00000433120.5	alternative 5' UTR
ENST00000445025.1	alternative 5' UTR
ENST00000375180.7	MANE_select
ENST00000426602.2	ribosomal protein L37 (RPL37) pseudogene
ENST00000458404.1	alternative 5' UTR
ENST00000451120.1	ribosomal protein L7A (RPL7A) pseudogene
ENST00000375151.5	MANE_select
ENST00000375151.5	novel protein
ENST00000375135.4	MANE_select
ENST00000375135.4	faciogenital dysplasia (Aarskog-Scott syndrome) protein
ENST00000674229.1	Assembled from SLRseq reads (SRP049776)
ENST00000674498.1	Assembled from SLRseq reads (SRP049776)
ENST00000674498.1	alternative 3' UTR
ENST00000674300.1	Assembled from SLRseq reads (SRP049776)
ENST00000674225.1	Assembled from SLRseq reads (SRP049776)
ENST00000674225.1	alternative 5' UTR
ENST00000674178.1	Assembled from SLRseq reads (SRP049776)
ENST00000336470.8	FLJ10613
ENST00000360845.3	MANE_select
ENST00000674238.1	Assembled from SLRseq reads (SRP049776)
ENST00000674420.1	Assembled from SLRseq reads (SRP049776)
ENST00000674311.1	Assembled from SLRseq reads (SRP049776)
ENST00000674311.1	alternative 5' UTR
ENST00000674508.1	Assembled from PacBio CLS reads - CAGE_PolyA_noHiSeq (GSE93848)
ENST00000674508.1	alternative 5' UTR
ENST00000426407.2	pseudogenephosphoglycerate mutase (PGAM) pseudogene
ENST00000218436.7	MANE_select
ENST00000375068.6	MANE_select
ENST00000375068.6	melanoma antigen, family D2
ENST00000347546.8	melanoma antigen, family D2
ENST00000463787.5	melanoma antigen, family D2
ENST00000375058.5	alternative 5' UTR
ENST00000375058.5	melanoma antigen, family D2
ENST00000375060.5	melanoma antigen, family D2
ENST00000485483.1	melanoma antigen, family D2
ENST00000497484.1	melanoma antigen, family D2
ENST00000487482.5	melanoma antigen, family D2
ENST00000487463.1	melanoma antigen, family D2
ENST00000452830.5	alternative 5' UTR
ENST00000452830.5	trophinin
ENST00000442098.5	alternative 5' UTR
ENST00000430420.5	alternative 5' UTR
ENST00000453081.5	alternative 5' UTR
ENST00000445561.5	trophinin
ENST00000440072.5	alternative 5' UTR
ENST00000173898.12	MANE_select
ENST00000173898.12	trophinin
ENST00000474933.6	splice donor between exon 3 and 4 is non-canonical
ENST00000440759.5	alternative 5' UTR
ENST00000449980.1	alternative 5' UTR
ENST00000416704.1	alternative 5' UTR
ENST00000427099.1	alternative 5' UTR
ENST00000427099.1	trophinin
ENST00000492142.5	trophinin
ENST00000492706.5	trophinin
ENST00000475183.1	trophinin
ENST00000375006.8	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
ENST00000375006.8	MANE_select
ENST00000374987.4	APEX nuclease (apurinic/apyrimidinic endonuclease) 2
ENST00000374987.4	MANE_select
ENST00000471758.1	APEX nuclease (apurinic/apyrimidinic endonuclease) 2
ENST00000650242.1	LR annotation
ENST00000650242.1	MANE_select
ENST00000463868.5	NMD likely if extended
ENST00000463868.5	aminolevulinate, delta-, synthase 2 (sideroblastic/hypochromic anemia)
ENST00000413370.1	likely ortholog of mouse hepatoma-derived growth factor related protein 3 pseudogene (HDGFRP3)
ENST00000374971.2	MANE_select
ENST00000374968.9	MANE_select
ENST00000449097.1	alternative 5' UTR
ENST00000334118.6	G antigen, family D pseudogene
ENST00000433928.1	cytochrome c oxidase I (MTCO1) pseudogene
ENST00000453434.1	NADH dehydrogenase 2 (MTND2) pseudogene
ENST00000441241.1	NADH dehydrogenase 1 (MTND1) pseudogene
ENST00000545075.3	MANE_select
ENST00000545075.3	not best-in-genome evidence
ENST00000374955.8	MANE_select
ENST00000374955.8	PAGE-5 protein (PAGE-5)
ENST00000289619.9	PAGE-5 protein (PAGE-5)
ENST00000374952.1	PAGE-5 protein (PAGE-5)
ENST00000519203.1	alternative 5' UTR
ENST00000342972.3	APR-1 protein (MAGEH1)
ENST00000342972.3	MANE_select
ENST00000448334.1	proteasome (prosome, macropain) subunit alpha, type 5 (PSMA5) pseudogene
ENST00000339140.5	MANE_select
ENST00000414239.5	Ras-related GTP binding B
ENST00000374941.9	MANE_select
ENST00000374941.9	Ras-related GTP binding B
ENST00000262850.7	Ras-related GTP binding B
ENST00000498762.1	Ras-related GTP binding B
ENST00000474757.1	Ras-related GTP binding B
ENST00000475061.1	Ras-related GTP binding B
ENST00000452532.1	novel transcript
ENST00000666613.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653318.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658575.1	Assembled from SLRseq reads (SRP049776)
ENST00000669152.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669152.1	Assembled from SLRseq reads (SRP049776)
ENST00000655874.1	Assembled from SLRseq reads (SRP049776)
ENST00000661602.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000398901.2	glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2) (GOT2) pseudogene
ENST00000468660.6	MANE_select
ENST00000358094.7	Kruppel-like factor 8
ENST00000434984.2	ribosomal protein L23a (RPL23A) pseudogene
ENST00000338222.7	MANE_select
ENST00000446028.1	putative novel transcript
ENST00000637096.1	NMD exception
ENST00000374922.9	MANE_select
ENST00000374922.9	NMD exception
ENST00000451583.1	novel transcript
ENST00000640101.1	alternative 3' UTR
ENST00000638664.1	alternative 3' UTR
ENST00000640577.1	alternative 3' UTR
ENST00000639809.1	alternative 3' UTR
ENST00000639809.1	alternative 5' UTR
ENST00000640131.1	alternative 5' UTR
ENST00000640131.1	alternative 5' UTR; shares CDS with bA445O16.1.2
ENST00000640131.1	novel protein similar to spindlin
ENST00000640717.1	alternative 3' UTR
ENST00000639607.1	alternative 3' UTR
ENST00000639607.1	alternative 5' UTR
ENST00000639956.1	alternative 3' UTR
ENST00000639956.1	alternative 5' UTR
ENST00000638819.1	alternative 3' UTR
ENST00000640463.1	alternative 3' UTR
ENST00000639888.1	alternative 3' UTR
ENST00000640511.1	alternative 3' UTR
ENST00000640511.1	alternative 5' UTR
ENST00000639895.1	alternative 3' UTR
ENST00000639895.1	alternative 5' UTR
ENST00000638873.1	alternative 3' UTR
ENST00000638940.1	alternative 3' UTR
ENST00000638940.1	alternative 5' UTR
ENST00000640187.1	alternative 5' UTR
ENST00000639482.1	alternative 3' UTR
ENST00000639482.1	alternative 5' UTR
ENST00000478405.1	alternative 5' UTR
ENST00000478405.1	alternative 5' UTR; shares CDS with bA445O16.1.1
ENST00000478405.1	novel protein similar to spindlin
ENST00000640104.1	alternative 3' UTR
ENST00000640104.1	alternative 5' UTR
ENST00000639053.1	alternative 3' UTR
ENST00000639053.1	alternative 5' UTR
ENST00000639418.1	alternative 3' UTR
ENST00000640421.1	alternative 3' UTR
ENST00000475785.7	alternative 3' UTR
ENST00000639794.1	alternative 3' UTR
ENST00000640507.1	alternative 5' UTR
ENST00000639257.1	alternative 3' UTR
ENST00000639257.1	alternative 5' UTR
ENST00000639257.1	non canonical TEC
ENST00000640039.1	alternative 3' UTR
ENST00000638834.1	alternative 3' UTR
ENST00000638834.1	alternative 5' UTR
ENST00000639000.1	alternative 3' UTR
ENST00000640728.1	alternative 3' UTR
ENST00000374919.6	MANE_select
ENST00000374919.6	novel protein similar to spindlin
ENST00000638257.1	alternative 5' UTR
ENST00000638712.1	alternative 5' UTR
ENST00000638386.1	alternative 5' UTR
ENST00000638289.1	alternative 5' UTR
ENST00000639007.1	alternative 5' UTR
ENST00000638481.1	alternative 5' UTR
ENST00000638619.1	alternative 5' UTR
ENST00000430456.1	putative novel transcript
ENST00000404529.2	spindlin-like protein 2 (SPIN2) pseudogne
ENST00000460948.1	novel transcript
ENST00000374910.3	spindlin-like protein 2 (SPIN2)
ENST00000275988.5	spindlin-like protein 2 (SPIN2)
ENST00000434397.3	MANE_select
ENST00000434397.3	alternative 5' UTR
ENST00000439622.1	putative novel transcript
ENST00000374908.1	novel protien similar to SPIN2
ENST00000374906.3	novel protien similar to SPIN2
ENST00000657273.1	Assembled from SLRseq reads (SRP049776)
ENST00000423543.1	protein phosphatase 1, regulatory (inhibitor) subunit 11 (PPP1R11) pseudogene
ENST00000374900.5	MANE_select
ENST00000374900.5	novel protein (FLJ31204)
ENST00000491179.1	QC splicing correct
ENST00000491179.1	non canonical TEC
ENST00000465623.1	novel transcript
ENST00000413059.1	methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase (MTHFD1) pseudogene
ENST00000374888.3	MANE_select
ENST00000374888.3	zinc finger, X-linked, duplicated B
ENST00000434992.1	MANE_select
ENST00000416450.1	malate dehydrogenase 1, NAD (soluble) (MDH1) pseudogene
ENST00000358697.6	MANE_select
ENST00000358697.6	zinc finger, X-linked, duplicated A
ENST00000449268.1	v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian) (MYCL1) pseudogene
ENST00000453110.1	keratin 8 (KRT8) pseudogene
ENST00000455793.1	Sjogren syndrome antigen B (autoantigen La) (SSB) pseudogene
ENST00000449206.1	NADH dehydrogenase 1 (MTND1) pseudogene
ENST00000449028.1	NADH dehydrogenase 2 (MTND2) pseudogene
ENST00000457579.1	zinc finger protein (ZFP) pseudogene
ENST00000667050.1	Assembled from SLRseq reads (SRP049776)
ENST00000665386.1	Assembled from SLRseq reads (SRP049776)
ENST00000670731.1	Assembled from SLRseq reads (SRP049776)
ENST00000610088.6	Assembled from SLRseq reads (SRP049776)
ENST00000659363.1	Assembled from SLRseq reads (SRP049776)
ENST00000666891.1	Assembled from SLRseq reads (SRP049776)
ENST00000664128.1	Assembled from SLRseq reads (SRP049776)
ENST00000661141.1	Assembled from SLRseq reads (SRP049776)
ENST00000659374.1	Assembled from SLRseq reads (SRP049776)
ENST00000669572.1	Assembled from SLRseq reads (SRP049776)
ENST00000654366.1	Assembled from SLRseq reads (SRP049776)
ENST00000659087.1	Assembled from SLRseq reads (SRP049776)
ENST00000653861.1	Assembled from SLRseq reads (SRP049776)
ENST00000670248.1	Assembled from SLRseq reads (SRP049776)
ENST00000654880.1	Assembled from SLRseq reads (SRP049776)
ENST00000664356.1	Assembled from SLRseq reads (SRP049776)
ENST00000666437.1	Assembled from SLRseq reads (SRP049776)
ENST00000670203.1	Assembled from SLRseq reads (SRP049776)
ENST00000656953.1	Assembled from SLRseq reads (SRP049776)
ENST00000669201.1	Assembled from SLRseq reads (SRP049776)
ENST00000666216.1	Assembled from SLRseq reads (SRP049776)
ENST00000659222.1	Assembled from SLRseq reads (SRP049776)
ENST00000662689.1	Assembled from SLRseq reads (SRP049776)
ENST00000662779.1	Assembled from SLRseq reads (SRP049776)
ENST00000608788.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665831.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669422.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000609401.6	Assembled from SLRseq reads (SRP049776)
ENST00000609143.6	Assembled from SLRseq reads (SRP049776)
ENST00000671033.1	Assembled from SLRseq reads (SRP049776)
ENST00000656972.1	Assembled from SLRseq reads (SRP049776)
ENST00000662156.1	Assembled from SLRseq reads (SRP049776)
ENST00000665925.1	Assembled from SLRseq reads (SRP049776)
ENST00000670242.1	Assembled from SLRseq reads (SRP049776)
ENST00000654240.1	Assembled from SLRseq reads (SRP049776)
ENST00000671338.1	Assembled from SLRseq reads (SRP049776)
ENST00000433061.1	novel transcript
ENST00000374884.3	MANE_select
ENST00000253401.10	Cdc42 guanine nucleotide exchange factor (GEF) 9
ENST00000671741.2	MANE_select
ENST00000374878.5	Cdc42 guanine nucleotide exchange factor (GEF) 9
ENST00000671907.1	alternative 5' UTR
ENST00000636048.1	alternative 5' UTR
ENST00000624538.2	alternative 5' UTR
ENST00000637520.1	alternative 5' UTR
ENST00000637417.1	alternative 5' UTR
ENST00000637417.1	upstream ATG
ENST00000637557.1	alternative 5' UTR
ENST00000495564.5	Cdc42 guanine nucleotide exchange factor (GEF) 9
ENST00000624210.3	alternative 5' UTR
ENST00000637723.2	alternative 5' UTR
ENST00000637178.1	alternative 5' UTR
ENST00000498761.5	variant 4Cdc42 guanine nucleotide exchange factor (GEF) 9
ENST00000466925.4	Cdc42 guanine nucleotide exchange factor (GEF) 9
ENST00000635967.1	alternative 5' UTR
ENST00000635967.1	upstream ATG
ENST00000374872.4	Cdc42 guanine nucleotide exchange factor (GEF) 9
ENST00000636392.1	alternative 5' UTR
ENST00000623417.3	alternative 5' UTR
ENST00000625116.3	alternative 5' UTR
ENST00000623566.3	alternative 5' UTR
ENST00000624355.1	alternative 5' UTR
ENST00000420917.1	novel transcript
ENST00000414577.1	basic transcription factor 3 (BTF3) pseudogene
ENST00000439535.1	ribonucleoprotein pseudogene
ENST00000374869.8	CAGE supported TSS
ENST00000374869.8	LR annotation
ENST00000374869.8	MANE_select
ENST00000671386.1	Assembled from PacBio Capture-seq (GSE93848) reads - noCAGE_noPolyA_noHiSeq
ENST00000362002.3	MANE_select
ENST00000374852.4	MANE_select
ENST00000374852.4	myotubularin related protein 8
ENST00000478487.5	myotubularin related protein 8
ENST00000462447.5	myotubularin related protein 8
ENST00000461403.1	myotubularin related protein 8
ENST00000396110.2	karyopherin alpha 4 (importin alpha 3) (KPNA4) pseudogene
ENST00000425230.2	SHC (Src homology 2 domain containing) transforming protein 1 (SHC1) pseudogene
ENST00000436906.1	YWHA tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein pseudogene
ENST00000447301.2	keratin 8 (KRT8) pseudogene
ENST00000421856.1	GrpE-like 2, mitochondrial (E. coli) pseudogene
ENST00000428431.1	novel pseudogene
ENST00000374839.8	MANE_select
ENST00000374839.8	hepatocellular carcinoma-associated antigen 127 (HCA127), variant 1 (FLJ12856)
ENST00000337990.2	hepatocellular carcinoma-associated antigen 127 (HCA127), variant 2 (FLJ12745)
ENST00000488608.5	hepatocellular carcinoma-associated antigen 127 (HCA127), variant 3 (KIAA1166)
ENST00000488406.1	hepatocellular carcinoma-associated antigen 127 (HCA127)
ENST00000492653.5	hepatocellular carcinoma-associated antigen 127 (HCA127)
ENST00000488831.5	hepatocellular carcinoma-associated antigen 127 (HCA127)
ENST00000476032.1	hepatocellular carcinoma-associated antigen 127 (HCA127)
ENST00000451184.1	karyopherin alpha 2 (RAG cohort 1, importin alpha 1) (KPNA2) pseudogene
ENST00000233836.5	chaperonin containing TCP1, subunit 4 (delta) (CCT4) pseudogene
ENST00000433352.1	mortality factor 4 like 1 (MORF4L1) pseudogene
ENST00000454528.1	novel pseudogene
ENST00000338957.4	NP_001010888.3
ENST00000422965.1	pseudogene similar to part of TLE family ( transducin-like enhancer of split  (E(sp1) homolog, Drosophila))
ENST00000374811.8	MANE_select
ENST00000484069.1	novel transcript, variant 3 (FLJ30255, FLJ00158)
ENST00000469091.1	novel transcript
ENST00000433173.1	adaptor-related protein complex 1 (AP1M2) pseudogene
ENST00000440433.1	novel pseudogene
ENST00000609672.5	alternative 5' UTR
ENST00000609672.5	upstream ATG
ENST00000360270.7	MANE_select
ENST00000360270.7	moesin
ENST00000430422.1	eukaryotic translation termination factor 1 (ETF1) pseudogene
ENST00000426799.1	cyclin fold protein 1 (CFP1) pseudogene
ENST00000650998.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000664185.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668558.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000424241.1	putative novel transcript
ENST00000655964.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000456392.1	heterogenous nuclear ribonucleoprotein G pseudogene
ENST00000658749.1	Assembled from SLRseq reads (SRP049776)
ENST00000427538.5	novel protein
ENST00000374737.9	Ig superfamily protein (Z39IG)
ENST00000374737.9	MANE_select
ENST00000412866.2	NP_001093901.1
ENST00000412866.2	novel protein
ENST00000651578.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000311910.6	novel pseudogene
ENST00000438308.1	eukaryotic translation initiation factor 4B (EIF4B) pseudogene
ENST00000519389.5	NP_620074.3
ENST00000336279.9	NP_055614.1
ENST00000458621.5	alternative 5' UTR
ENST00000343002.6	NP_620074.2
ENST00000343002.6	alternative 5' UTR
ENST00000425114.1	hephaestin
ENST00000415190.1	likely ortholog of chicken chondrocyte protein with a poly-proline region (CHPPR) pseudogene
ENST00000422490.1	novel pseudogene
ENST00000412159.1	pyruvate kinase muscle (PKM2) pseudogene
ENST00000374719.8	MANE_select
ENST00000374719.8	ectodysplasin A2 isoform receptor (XEDAR)
ENST00000253392.5	ectodysplasin A2 isoform receptor (XEDAR)
ENST00000441055.1	zinc finger protein pseudogene
ENST00000449099.1	poly(A) binding protein, nuclear 1 (PABPN1) pseudogene
ENST00000374690.9	CAGE supported TSS
ENST00000374690.9	LR annotation
ENST00000374690.9	MANE_select
ENST00000445879.1	B lymphoma Mo-MLV insertion region (mouse) (BMI1) pseudogene
ENST00000355520.6	MANE_select
ENST00000355520.6	oligophrenin 1 (OPN1)
ENST00000484842.1	oligophrenin 1 (OPN1)
ENST00000467444.1	oligophrenin 1 (OPN1)
ENST00000486068.1	oligophrenin 1 (OPN1)
ENST00000680804.1	alternative 5' UTR
ENST00000491714.2	oligophrenin 1 (OPN1)
ENST00000426382.2	phosphoglycerate kinase 1 (PGK1) pseudogene
ENST00000440655.2	novel pseudogene
ENST00000450604.1	nudE nuclear distribution gene E homolog like 1 (A. nidulans)(NDEL1) pseudogene
ENST00000451537.5	novel protein
ENST00000470730.5	novel transcript
ENST00000374643.7	novel transcript
ENST00000462683.6	MANE_select
ENST00000462683.6	novel protein (MGC21416)
ENST00000462972.1	novel transcript
ENST00000496576.1	novel transcript
ENST00000422565.1	ribosomal protein L31 (RPL31) pseudogene
ENST00000446748.1	cytochrome c oxidase subunit VIc (COX6C) pseudogene
ENST00000488088.1	START domain containing 8
ENST00000523864.5	START domain containing 8
ENST00000374599.7	NP_001135975.1
ENST00000374597.3	START domain containing 8
ENST00000439585.1	actin-related protein 3 (yeast) (ACTR3) pseudogene
ENST00000396021.2	novel pseudogene
ENST00000204961.5	MANE_select
ENST00000204961.5	ephrin-B1
ENST00000374583.1	alternative 5' UTR
ENST00000374571.5	MANE_select
ENST00000477231.1	praja 1
ENST00000590146.1	alternative 5' UTR
ENST00000303758.7	high-mobility group nucleosome binding domain 1 (HMGN1) pseudogene
ENST00000654300.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000438233.2	cytochrome c, somatic (CYCS) pseudogene
ENST00000252338.5	MANE_select
ENST00000665331.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000454131.1	putative novel transcript
ENST00000525810.5	NP_001005615
ENST00000502251.5	NMD likely if extended
ENST00000374552.9	MANE_select
ENST00000510681.2	QC splicing correct
ENST00000429006.1	CCR4-NOT transcription complex, subunit 7 (CNOT7) pseudogene
ENST00000651174.1	Assembled from PacBio RACEseq reads (UKGTN genes)
ENST00000276101.7	MANE_select
ENST00000338352.3	MANE_select
ENST00000438855.1	cytochrome B family pseudogene
ENST00000425607.1	NADH dehydrogenase 5 (MTND5) pseudogene
ENST00000356413.5	MANE_select
ENST00000356413.5	immunoglobulin (CD79A) binding protein 1
ENST00000342206.10	immunoglobulin (CD79A) binding protein 1
ENST00000403371.2	putative novel transcript
ENST00000366397.3	novel transcript
ENST00000333026.4	MANE_select
ENST00000333026.4	novel protein similar to diacylglycerol O-acyltransferase homolog 2 (mouse) (DGAT2)
ENST00000333026.4	novel protein similar to diacylglycerol O-acyltransferase homolog 2 (mouse)(DGAT2)
ENST00000480702.1	novel transcript
ENST00000374521.4	MANE_select
ENST00000374519.3	pyrimidinergic receptor P2Y, G-protein coupled, 4
ENST00000477379.5	arrestin 3, retinal (X-arrestin)
ENST00000307959.9	MANE_select
ENST00000374473.6	MANE_select
ENST00000276066.4	NP_001027898
ENST00000239666.9	MANE_select
ENST00000239666.9	novel protein (FLJ21093)
ENST00000374454.1	novel protein
ENST00000473667.5	novel transcript
ENST00000486461.1	novel transcript
ENST00000374403.4	MANE_select
ENST00000374403.4	kinesin family member 4A
ENST00000485406.1	kinesin family member 4A
ENST00000412817.1	novel pseudogene
ENST00000374382.4	MANE_select
ENST00000374382.4	novel protein
ENST00000472623.1	novel transcript
ENST00000374360.8	MANE_select
ENST00000424211.1	novel transcript
ENST00000431103.1	novel transcript
ENST00000374333.7	MANE_select
ENST00000396055.2	novel pseudogene
ENST00000374299.8	MANE_select
ENST00000374299.8	solute carrier family 7 (cationic amino acid transporter, y+ system) member 3
ENST00000298085.4	solute carrier family 7 (cationic amino acid transporter, y+ system) member 3
ENST00000429775.2	40S ribosomal protein S23 (RPS23) pseudogene
ENST00000453086.1	nuclear transport factor 2 (NUTF2) pseudogene
ENST00000454743.1	suppressor of cytokine signaling 5 (SOCS5) pseudogene
ENST00000483560.1	sorting nexin 12
ENST00000374274.8	MANE_select
ENST00000374274.8	NP_001243114.1
ENST00000374274.8	sorting nexin 12
ENST00000490561.6	non canonical TEC
ENST00000490561.6	sorting nexin 12
ENST00000465030.1	sorting nexin 12
ENST00000276105.3	NP_001243117.1
ENST00000276105.3	sorting nexin 12
ENST00000374259.8	MANE_select
ENST00000374259.8	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 7 (AFX1)
ENST00000466874.1	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 7 (AFX1)
ENST00000341558.3	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 7 (AFX1)
ENST00000464598.1	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 7 (AFX1)
ENST00000374251.6	MANE_select
ENST00000374251.6	novel protein (LOC158830)
ENST00000466160.1	putative novel transcript
ENST00000483257.1	novel transcript
ENST00000646505.1	alternative 3' UTR
ENST00000374202.7	MANE_select
ENST00000374080.8	MANE_select
ENST00000374080.8	trinucleotide repeat containing 11 (THR-associated protein, 230kDa subunit) (HOPA, OPA1, CAGH45, TRAP230, KIAA0192)
ENST00000374102.5	trinucleotide repeat containing 11 (THR-associated protein, 230kDa subunit) (HOPA, OPA1, CAGH45, TRAP230, KIAA0192)
ENST00000471663.5	trinucleotide repeat containing 11 (THR-associated protein, 230kDa subunit) (HOPA, OPA1, CAGH45, TRAP230, KIAA0192)
ENST00000462984.1	trinucleotide repeat containing 11 (THR-associated protein, 230kDa subunit) (HOPA, OPA1, CAGH45, TRAP230, KIAA0192)
ENST00000489199.1	trinucleotide repeat containing 11 (THR-associated protein, 230kDa subunit) (HOPA, OPA1, CAGH45, TRAP230, KIAA0192)
ENST00000460771.1	trinucleotide repeat containing 11 (THR-associated protein, 230kDa subunit) (HOPA, OPA1, CAGH45, TRAP230, KIAA0192)
ENST00000444034.1	trinucleotide repeat containing 11 (THR-associated protein, 230kDa subunit) (HOPA, OPA1, CAGH45, TRAP230, KIAA0192)
ENST00000358741.4	MANE_select
ENST00000358741.4	neuroligin 3 (HNL3, KIAA1480)
ENST00000395855.6	neuroligin 3 (HNL3, KIAA1480)
ENST00000374051.7	neuroligin 3 (HNL3, KIAA1480)
ENST00000476589.1	neuroligin 3 (HNL3, KIAA1480)
ENST00000664514.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652147.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000450860.1	putative novel transcript
ENST00000674844.1	alternative 5' UTR
ENST00000674549.1	alternative 5' UTR
ENST00000374029.2	alternative 5' UTR
ENST00000675209.1	alternative 5' UTR
ENST00000647424.1	LR annotation
ENST00000675368.1	alternative 5' UTR
ENST00000675609.1	alternative 5' UTR
ENST00000646835.1	alternative 5' UTR
ENST00000447581.2	alternative 5' UTR
ENST00000645009.2	alternative 5' UTR
ENST00000361726.7	LR annotation
ENST00000361726.7	MANE_select
ENST00000361726.7	alternative 5' UTR
ENST00000314425.9	MANE_select
ENST00000314425.9	zinc finger protein 261 (MYM, XFIM, DXS6673E, KIAA0385, ZNF198L2)
ENST00000373998.5	zinc finger protein 261 (MYM, XFIM, DXS6673E, KIAA0385, ZNF198L2)
ENST00000489332.1	zinc finger protein 261 (MYM, XFIM, DXS6673E, KIAA0385, ZNF198L2)
ENST00000373984.7	zinc finger protein 261 (MYM, XFIM, DXS6673E, KIAA0385, ZNF198L2)
ENST00000373988.5	zinc finger protein 261 (MYM, XFIM, DXS6673E, KIAA0385, ZNF198L2)
ENST00000470832.1	zinc finger protein 261 (MYM, XFIM, DXS6673E, KIAA0385, ZNF198L2)
ENST00000373982.5	zinc finger protein 261 (MYM, XFIM, DXS6673E, KIAA0385, ZNF198L2)
ENST00000373981.5	zinc finger protein 261 (MYM, XFIM, DXS6673E, KIAA0385, ZNF198L2)
ENST00000373978.1	zinc finger protein 261 (MYM, XFIM, DXS6673E, KIAA0385, ZNF198L2)
ENST00000677446.1	alternative 5' UTR
ENST00000677274.1	alternative 5' UTR
ENST00000420903.6	alternative 5' UTR
ENST00000420903.6	non-POU domain containing, octamer-binding protein (P54, NMT55, NRB54, P54NRB)
ENST00000679267.1	non-POU domain containing, octamer-binding protein (P54, NMT55, NRB54, P54NRB)
ENST00000473525.2	non-POU domain containing, octamer-binding protein (P54, NMT55, NRB54, P54NRB)
ENST00000373841.5	alternative 5' UTR
ENST00000373841.5	non-POU domain containing, octamer-binding protein (P54, NMT55, NRB54, P54NRB)
ENST00000276079.13	MANE_select
ENST00000276079.13	non-POU domain containing, octamer-binding protein (P54, NMT55, NRB54, P54NRB)
ENST00000474431.5	non-POU domain containing, octamer-binding protein (P54, NMT55, NRB54, P54NRB)
ENST00000678231.1	alternative 5' UTR
ENST00000677612.1	alternative 5' UTR
ENST00000472185.1	non-POU domain containing, octamer-binding protein (P54, NMT55, NRB54, P54NRB)
ENST00000413858.5	non-POU domain containing, octamer-binding protein (P54, NMT55, NRB54, P54NRB)
ENST00000486613.6	NMD likely if extended
ENST00000486613.6	non-POU domain containing, octamer-binding protein (P54, NMT55, NRB54, P54NRB)
ENST00000450092.6	alternative 5' UTR
ENST00000450092.6	non-POU domain containing, octamer-binding protein (P54, NMT55, NRB54, P54NRB)
ENST00000454976.2	alternative 5' UTR
ENST00000454976.2	non-POU domain containing, octamer-binding protein (P54, NMT55, NRB54, P54NRB)
ENST00000418921.1	non-POU domain containing, octamer-binding protein (P54, NMT55, NRB54, P54NRB)
ENST00000490044.5	non canonical TEC
ENST00000490044.5	non-POU domain containing, octamer-binding protein (P54, NMT55, NRB54, P54NRB)
ENST00000373829.8	MANE_select
ENST00000373829.8	integrin beta 1 binding protein (melusin) 2 (ITGB1BP, MELUSIN, MSTP015)
ENST00000483897.1	integrin beta 1 binding protein (melusin) 2 (ITGB1BP, MELUSIN, MSTP015)
ENST00000465388.1	integrin beta 1 binding protein (melusin) 2 (ITGB1BP, MELUSIN, MSTP015)
ENST00000475413.1	integrin beta 1 binding protein (melusin) 2 (ITGB1BP, MELUSIN, MSTP015)
ENST00000436372.1	MADP-1 protein (MADP-1) pseudogene
ENST00000395798.2	ras homolog gene family, member G (rho G) (ARHG) pseudogene
ENST00000423759.6	CAGE supported TSS
ENST00000423759.6	MANE_select
ENST00000423759.6	upstream ATG
ENST00000461157.1	TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa (OF, BA2R, CCG1, CCGS, P250, NSCL2, TAF2A, TAFII250)
ENST00000425885.1	pseudogene similar to part of ras-related C3 botulinum toxin substrate
ENST00000391782.2	pseudogene similar to part of poly(A) binding protein, nuclear 1 (PABPN1)
ENST00000373719.8	MANE_select
ENST00000462638.1	O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) (HRNT1, FLJ23071, MGC22921, O-GLCNAC)
ENST00000466181.1	O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) (HRNT1, FLJ23071, MGC22921, O-GLCNAC)
ENST00000373695.1	alternative 5' UTR
ENST00000373693.4	MANE_select
ENST00000433410.1	putative novel transcript
ENST00000637198.1	novel transcript
ENST00000636096.2	not best-in-genome evidence
ENST00000452056.1	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa (NDUFA4) pseudogene
ENST00000452468.1	novel transcript
ENST00000535490.2	not best-in-genome evidence
ENST00000430476.1	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa (NDUFA4) pseudogene
ENST00000455722.1	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa (NDUFA4) pseudogene
ENST00000638412.1	putative novel transcript
ENST00000542739.2	not best-in-genome evidence
ENST00000440412.1	novel transcript
ENST00000427368.1	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa (NDUFA4) pseudogene
ENST00000424182.1	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa (NDUFA4) pseudogene
ENST00000631833.1	CAGE supported TSS
ENST00000631375.1	CAGE supported TSS
ENST00000632230.1	CAGE supported TSS
ENST00000479991.1	KIAA2001
ENST00000432517.1	apoptosis inhibitor (FKSG2) pseudogene
ENST00000373662.4	upstream ATG
ENST00000218432.10	upstream ATG
ENST00000373669.8	CAGE supported TSS
ENST00000373669.8	MANE_select
ENST00000373669.8	NP_006214
ENST00000373669.8	upstream ATG
ENST00000496835.7	upstream ATG
ENST00000652108.2	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000439980.7	upstream ATG
ENST00000373657.2	FLJ20105
ENST00000334463.4	MANE_select
ENST00000470671.1	ribosomal protein S4, X-linked (CCG2, SCAR, SCR10, DXS306)
ENST00000492695.1	ribosomal protein S4, X-linked (CCG2, SCAR, SCR10, DXS306)
ENST00000316084.10	MANE_select
ENST00000316084.10	ribosomal protein S4, X-linked (CCG2, SCAR, SCR10, DXS306)
ENST00000486733.2	ribosomal protein S4, X-linked (CCG2, SCAR, SCR10, DXS306)
ENST00000373626.4	ribosomal protein S4, X-linked (CCG2, SCAR, SCR10, DXS306)
ENST00000453707.6	NP_001138357
ENST00000651998.1	MANE_select
ENST00000651998.1	genebuild_only_MANE
ENST00000429794.1	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 (MSG1)
ENST00000246139.9	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 (MSG1)
ENST00000246139.9	alternative 5' UTR
ENST00000246139.9	alternative 5' UTR; shares CDS with Em:AL135749.4.1, Em:AL135749.4.3, Em:AL135749.4.4, Em:AL135749.4.5, Em:AL135749.4.6 and Em:AL135749.4.7
ENST00000417400.1	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 (MSG1)
ENST00000417400.1	alternative 5' UTR
ENST00000417400.1	alternative 5' UTR; shares CDS with Em:AL135749.4.1, Em:AL135749.4.2, Em:AL135749.4.3, Em:AL135749.4.4, Em:AL135749.4.5 and Em:AL135749.4.6
ENST00000427412.5	alternative 5' UTR
ENST00000450875.5	alternative 5' UTR
ENST00000454225.1	alternative 5' UTR
ENST00000373573.9	MANE_select
ENST00000373573.9	upstream ATG
ENST00000648850.1	alternative 3' UTR
ENST00000648504.1	alternative 3' UTR
ENST00000373589.9	upstream ATG
ENST00000647859.1	alternative 3' UTR
ENST00000650604.1	upstream ATG
ENST00000649543.1	alternative 3' UTR
ENST00000648834.1	alternative 3' UTR
ENST00000478743.2	NAGNAG splice site
ENST00000649242.1	alternative 3' UTR
ENST00000649518.1	alternative 3' UTR
ENST00000439122.7	FLJ23746
ENST00000439122.7	upstream ATG
ENST00000647974.1	alternative 3' UTR
ENST00000648577.1	alternative 3' UTR
ENST00000444609.1	NMD likely if extended
ENST00000373542.9	MANE_select
ENST00000373542.9	phosphorylase kinase, alpha 1 (muscle)
ENST00000373545.7	phosphorylase kinase, alpha 1 (muscle)
ENST00000373539.3	phosphorylase kinase, alpha 1 (muscle)
ENST00000417774.1	matrin 3 (MATR3) pseudogene
ENST00000420998.1	novel transcript
ENST00000395709.2	capping protein (actin filament) muscle Z-line, alpha 1 (CAPZA1) pseudogene
ENST00000472595.5	DMRT-like family C1
ENST00000373533.5	DMRT-like family C1
ENST00000438696.5	DMRT-like family C1
ENST00000596535.3	MANE_select
ENST00000419795.5	not best-in-genome evidence
ENST00000458170.1	not best-in-genome evidence
ENST00000615063.1	alternative 5' UTR
ENST00000636532.1	not best-in-genome evidence
ENST00000636267.1	MANE_select
ENST00000636267.1	not best-in-genome evidence
ENST00000611003.2	MANE_select
ENST00000416989.2	novel transcript
ENST00000373521.4	MANE_select
ENST00000373519.1	MANE_select
ENST00000373518.1	novel protein similar to nucleosome assemblu protein 1-like 2; brain specific gene BPX (LOC286486)
ENST00000373517.4	MANE_select
ENST00000373517.4	nucleosome assembly protein 1-like 2
ENST00000427861.2	translocase of outer mitochondrial membrane 20 (yeast) homolog (TOMM20) pseudogene
ENST00000421810.1	leucine rich repeat (in FLII) interacting protein 2 (LRRFIP2) pseudogene
ENST00000436935.2	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein (zeta polypeptide)(YWHAZ) pseudogene
ENST00000418771.1	mortality factor 4 like 1 (MORF4L1) pseudogene
ENST00000438453.1	mitogen-activated protein kinase kinase 4(LOC139201, MAP2K4) pseudogene
ENST00000421245.2	ribosomal protein L7 (RPL7) pseudogene
ENST00000373502.9	novel protein similar to Chic1 (LOC349423)
ENST00000498407.5	novel protein similar to Chic1 (LOC349423)
ENST00000498318.1	novel protein similar to Chic1
ENST00000446112.1	selenophosphate synthetase (SPS) pseudogene
ENST00000669898.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669898.1	Assembled from SLRseq reads (SRP049776)
ENST00000434839.3	Assembled from SLRseq reads (SRP049776)
ENST00000650627.1	X (inactive)-specific transcript
ENST00000421322.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000421322.3	X (inactive)-specific transcript
ENST00000666954.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000429829.6	X (inactive)-specific transcript
ENST00000647913.2	Assembled from SLRseq reads (SRP049776)
ENST00000635841.2	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000665247.1	Assembled from RACEseq reads
ENST00000666309.1	Assembled from RACEseq reads
ENST00000445814.2	X (inactive)-specific transcript
ENST00000430772.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000602776.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661133.1	Assembled from SLRseq reads (SRP049776)
ENST00000602812.6	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653018.1	Assembled from SLRseq reads (SRP049776)
ENST00000658448.1	Assembled from SLRseq reads (SRP049776)
ENST00000662240.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662240.1	Assembled from SLRseq reads (SRP049776)
ENST00000657611.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660481.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661084.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659574.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662494.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670936.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000602420.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658203.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669263.1	Assembled from SLRseq reads (SRP049776)
ENST00000652331.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657070.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000665069.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654870.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654870.1	Assembled from SLRseq reads (SRP049776)
ENST00000653874.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000666535.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658439.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664123.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661335.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652970.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000423992.3	novel transcript
ENST00000665313.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651140.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000660100.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656041.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657327.1	Assembled from SLRseq reads (SRP049776)
ENST00000664343.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664343.1	Assembled from SLRseq reads (SRP049776)
ENST00000664343.1	novel transcript
ENST00000656977.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671343.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659407.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671067.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660829.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000671385.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000418855.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000418855.6	novel transcript
ENST00000660224.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662864.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662864.1	Assembled from SLRseq reads (SRP049776)
ENST00000429124.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000429124.6	Assembled from SLRseq reads (SRP049776)
ENST00000429124.6	novel transcript
ENST00000668224.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668224.1	Assembled from SLRseq reads (SRP049776)
ENST00000654373.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664803.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659012.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000455395.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000455395.6	novel transcript
ENST00000659390.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653390.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664637.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664637.1	Assembled from SLRseq reads (SRP049776)
ENST00000655090.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655090.1	Assembled from SLRseq reads (SRP049776)
ENST00000660546.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000660840.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660840.1	Assembled from SLRseq reads (SRP049776)
ENST00000667886.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667886.1	Assembled from SLRseq reads (SRP049776)
ENST00000669168.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656624.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659254.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662120.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657910.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671207.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670506.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657179.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657179.1	Assembled from SLRseq reads (SRP049776)
ENST00000666493.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667573.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660856.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660856.1	Assembled from SLRseq reads (SRP049776)
ENST00000668590.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000668590.1	Assembled from SLRseq reads (SRP049776)
ENST00000660836.1	Assembled from SLRseq reads (SRP049776)
ENST00000654137.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000414209.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658649.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670994.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653479.1	Assembled from SLRseq reads (SRP049776)
ENST00000667645.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655879.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000602895.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654995.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663027.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670503.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670685.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000602985.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657096.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657372.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657372.1	Assembled from SLRseq reads (SRP049776)
ENST00000602737.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000602938.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000662543.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661546.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665345.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670464.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670192.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667057.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671476.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671336.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665032.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000660087.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654374.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653808.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657638.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000653069.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656263.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670805.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659373.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655994.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000662239.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000654196.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000661130.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659849.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667937.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671021.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000602920.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000663470.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667294.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000602294.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656509.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659852.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669149.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669149.1	Assembled from SLRseq reads (SRP049776)
ENST00000654005.1	Assembled from SLRseq reads (SRP049776)
ENST00000664295.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000453317.1	novel transcript
ENST00000664328.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659023.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653885.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653929.1	Assembled from SLRseq reads (SRP049776)
ENST00000659622.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000415215.1	novel transcript
ENST00000671518.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670408.1	Assembled from SLRseq reads (SRP049776)
ENST00000666059.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668488.1	Assembled from SLRseq reads (SRP049776)
ENST00000666318.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000429143.1	laminin receptor 1 (ribosomal protein SA, 67 KDa, LAMR1) pseudogene
ENST00000366220.2	scotin (SCOTIN) pseudogene
ENST00000413508.1	novel alanyl-tRNA synthetase protein pseudogene
ENST00000431339.1	Np95-like ring finger protein (NIRF) pseudogene
ENST00000339534.4	MANE_select
ENST00000441858.1	ribosomal protein L39 (RPL39) pseudogene
ENST00000393214.2	ribosomal protein S6 (RPS6) pseudogene
ENST00000426405.1	ribosomal protein S7 (RPS7) pseudogene
ENST00000587091.6	MANE_select
ENST00000332687.11	MANE_select
ENST00000332687.11	ring finger protein 12
ENST00000349225.2	ring finger protein 12
ENST00000055682.12	KIAA2022
ENST00000055682.12	MANE_select
ENST00000616200.2	alternative 3' UTR
ENST00000373394.8	CAGE supported TSS
ENST00000373394.8	LR annotation
ENST00000373394.8	MANE_select
ENST00000253577.9	CAGE supported TSS
ENST00000253577.9	LR annotation
ENST00000339447.8	Genbank:CAD97847
ENST00000529949.5	Genbank:BAG57829
ENST00000490858.1	novel transcript
ENST00000526404.2	alternative 5' UTR
ENST00000526404.2	upstream ATG
ENST00000652605.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000373383.9	MANE_select
ENST00000373383.9	novel protein
ENST00000373379.5	FLJ31792
ENST00000462237.5	novel transcript
ENST00000474175.1	novel transcript
ENST00000373367.8	FLJ31812
ENST00000373367.8	MANE_select
ENST00000482827.1	novel transcript
ENST00000453468.1	ribosomal protein L21 (RPL21) pseudogene
ENST00000373359.4	MANE_select
ENST00000373359.4	hepatocellular carcinoma-associated protein (HCA3)
ENST00000413763.1	novel transcript
ENST00000373357.3	novel protein (MGC874)
ENST00000373358.8	MANE_select
ENST00000373358.8	novel protein (MGC874)
ENST00000423224.1	novel pseudogene
ENST00000456969.2	lactate dehydrogenase B pseudogene
ENST00000361470.4	MANE_select
ENST00000361470.4	hepatocellular carcinoma-associated protein HCA1 (KIAA1587)
ENST00000658368.1	Assembled from SLRseq reads (SRP049776)
ENST00000671589.1	Assembled from SLRseq reads (SRP049776)
ENST00000373344.11	CAGE supported TSS
ENST00000373344.11	LR annotation
ENST00000373344.11	MANE_select
ENST00000675732.1	CAGE supported TSS
ENST00000479487.1	alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae)
ENST00000460639.2	alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae)
ENST00000624166.3	NAGNAG splice site
ENST00000493470.2	alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae)
ENST00000625063.3	NAGNAG splice site
ENST00000624193.1	NMD likely if extended
ENST00000618282.5	CAGE supported TSS
ENST00000618282.5	MANE_select
ENST00000358075.10	NP_115497.4
ENST00000373336.3	CAGE supported TSS
ENST00000475465.1	cytochrome c oxidase subunit VIIb
ENST00000650309.2	CAGE supported TSS
ENST00000650309.2	LR annotation
ENST00000650309.2	MANE_select
ENST00000647835.1	alternative 3' UTR
ENST00000341514.11	MANE_select
ENST00000642651.1	alternative 5' UTR
ENST00000477335.5	phosphoglycerate kinase 1
ENST00000491291.1	phosphoglycerate kinase 1
ENST00000373316.5	MANE_select
ENST00000373316.5	phosphoglycerate kinase 1
ENST00000474281.1	phosphoglycerate kinase 1
ENST00000476531.1	phosphoglycerate kinase 1
ENST00000458128.3	MANE_select
ENST00000341864.6	MANE_select
ENST00000341864.6	TAF9-like RNA polymerase II, TATA box binding protein (TBP)-associated factor 31kDa
ENST00000480681.1	TAF9-like RNA polymerase II, TATA box binding protein (TBP)-associated factor 31kDa
ENST00000420795.2	novel pseudogene
ENST00000373304.4	MANE_select
ENST00000373304.4	cysteinyl leukotriene receptor 1
ENST00000493254.1	cysteinyl leukotriene receptor 1
ENST00000321110.2	MANE_select
ENST00000321110.2	zinc finger, CCHC domain containing 5
ENST00000435339.3	G protein-coupled receptor 23
ENST00000514744.5	alternative 5' UTR
ENST00000438336.2	60S ribosomal protein L7 (RPL7) pseudogene
ENST00000171757.3	MANE_select
ENST00000171757.3	purinergic receptor P2Y G-protein coupled 10
ENST00000461541.5	purinergic receptor P2Y G-protein coupled 10
ENST00000475374.5	purinergic receptor P2Y G-protein coupled 10
ENST00000645147.2	MANE_select
ENST00000645147.2	putative purinergic receptor (FKSG79)
ENST00000373298.7	MANE_select
ENST00000373298.7	integral membrane protein 2A
ENST00000469541.5	integral membrane protein 2A
ENST00000482194.1	integral membrane protein 2A
ENST00000462038.1	integral membrane protein 2A
ENST00000461357.1	integral membrane protein 2A
ENST00000373296.8	MANE_select
ENST00000373296.8	genebuild_only_MANE
ENST00000626498.2	T-box 22
ENST00000476373.1	T-box 22
ENST00000373294.8	T-box 22
ENST00000626877.1	T-box 22
ENST00000614414.4	non canonical TEC
ENST00000308293.5	novel protein (MGC26999)
ENST00000373275.5	MANE_select
ENST00000373275.5	novel WD repeat domain protein
ENST00000473691.1	novel WD repeat domain protein
ENST00000497335.1	putative novel transcript
ENST00000487313.1	novel transcript
ENST00000478415.1	novel WD repeat domain protein
ENST00000415494.1	proteasome (prosome, macropain) subunit, alpha type, 1 (PSMA1) pseudogene
ENST00000641352.1	CAGE supported TSS
ENST00000358130.7	MANE_select
ENST00000358130.7	nucleosomal binding protein 1
ENST00000447319.5	nucleosomal binding protein 1
ENST00000373250.7	nucleosomal binding protein 1
ENST00000430960.5	nucleosomal binding protein 1
ENST00000491275.1	nucleosomal binding protein 1
ENST00000436386.5	nucleosomal binding protein 1
ENST00000451455.1	nucleosomal binding protein 1
ENST00000373212.6	MANE_select
ENST00000373212.6	SH3 domain binding glutamic acid-rich protein like
ENST00000481106.5	SH3 domain binding glutamic acid-rich protein like
ENST00000463546.5	SH3 domain binding glutamic acid-rich protein like
ENST00000474113.1	SH3 domain binding glutamic acid-rich protein like
ENST00000415786.1	novel pseudogene
ENST00000412589.1	pseudogene similar to part of SLC9A2 (solute carrier family 9 (sodium/hydrogen exchanger), isoform 2)
ENST00000668576.1	Assembled from SLRseq reads (SRP049776)
ENST00000395439.3	ribosomal protein L22 (RPL22) pseudogene
ENST00000644024.2	CAGE supported TSS
ENST00000644024.2	LR annotation
ENST00000644024.2	MANE_select
ENST00000329312.5	MANE_select
ENST00000329312.5	cylicin, basic protein of sperm head cytoskeleton 1
ENST00000262752.5	MANE_select
ENST00000262752.5	ribosomal protein S6 kinase, 90kD, polypeptide 6
ENST00000495332.1	ribosomal protein S6 kinase, 90kD, polypeptide 6
ENST00000460730.1	ribosomal protein S6 kinase, 90kD, polypeptide 6
ENST00000373177.3	MANE_select
ENST00000373177.3	alternative 5' UTR
ENST00000449553.2	alternative 5' UTR
ENST00000373173.7	MANE_select
ENST00000373173.7	NP_940852.3
ENST00000373173.7	novel protein
ENST00000644105.2	MANE_select
ENST00000646235.1	alternative 5' UTR
ENST00000646118.1	alternative 5' UTR
ENST00000665337.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665337.1	novel transcript
ENST00000666023.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000443247.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000669792.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000674551.1	CAGE supported TSS
ENST00000674551.1	MANE_select
ENST00000373165.7	NP_068838.3
ENST00000276123.7	alternative 5' UTR
ENST00000262753.9	MANE_select
ENST00000262753.9	premature ovarian failure 1B (POF1B)
ENST00000373145.3	premature ovarian failure 1B (POF1B)
ENST00000357749.7	MANE_select
ENST00000467744.2	choroideremia (Rab escort protein 1)
ENST00000615443.1	choroideremia (Rab escort protein 1)
ENST00000487515.1	choroideremia (Rab escort protein 1)
ENST00000483950.1	choroideremia (Rab escort protein 1)
ENST00000373125.9	MANE_select
ENST00000508860.5	NP_001132987
ENST00000440037.1	ribosomal protein L7 (RPL7) pseudogene
ENST00000652270.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000373119.9	MANE_select
ENST00000373119.9	kelch-like 4 (Drosophila)
ENST00000373114.4	kelch-like 4 (Drosophila)
ENST00000276127.9	CPX chromosome region, candidate 1
ENST00000276127.9	MANE_select
ENST00000373111.5	CPX chromosome region, candidate 1
ENST00000420327.5	novel transcript
ENST00000435867.1	novel transcript
ENST00000283891.6	MANE_select
ENST00000561129.2	alternative 5' UTR
ENST00000418369.1	putative novel transcript
ENST00000456187.1	novel transcript
ENST00000312600.4	MANE_select
ENST00000443413.1	ribosomal protein L26 (RPL26) pseudogene
ENST00000441503.1	discs, large homolog 7 (Drosophila) (DLG7) pseudogene
ENST00000450522.1	ribosomal protein L7 (RPL7) pseudogene
ENST00000373079.4	MANE_select
ENST00000373079.4	nucleosome assembly protein 1-like 3
ENST00000475430.2	non canonical TEC
ENST00000475430.2	nucleosome assembly protein 1-like 3
ENST00000332647.5	novel protein (FLJ37659)
ENST00000653599.1	Assembled from SLRseq reads (SRP049776)
ENST00000669252.1	Assembled from SLRseq reads (SRP049776)
ENST00000658930.1	Assembled from SLRseq reads (SRP049776)
ENST00000656440.1	Assembled from SLRseq reads (SRP049776)
ENST00000446439.1	ribosomal protein S29 (RPS29) pseudogene
ENST00000373049.8	contains U12 dependent splicing (AT-AC)
ENST00000373049.8	diaphanous (Drosophila, homolog) 2
ENST00000373049.8	diaphanous homolog 2 (Drosophila)
ENST00000324765.13	MANE_select
ENST00000324765.13	contains U12 dependent splicing (AT-AC)
ENST00000324765.13	diaphanous (Drosophila, homolog) 2
ENST00000324765.13	diaphanous homolog 2 (Drosophila)
ENST00000373040.4	MANE_select
ENST00000439759.6	novel transcript (EPAG)
ENST00000445414.1	novel transcript (EPAG)
ENST00000414863.2	ribosomal protein L6 (RPL6) pseudogene
ENST00000420881.6	NAGNAG splice site
ENST00000420881.6	NP_065817.2
ENST00000373034.8	MANE_select
ENST00000255531.8	NP_001098713.1
ENST00000255531.8	confirm experimentally
ENST00000373031.5	MANE_select
ENST00000373031.5	tenomodulin protein (TNMD)
ENST00000485971.1	tenomodulin protein (TNMD)
ENST00000373020.9	MANE_select
ENST00000373020.9	transmembrane 4 superfamily member 6
ENST00000496771.5	transmembrane 4 superfamily member 6
ENST00000494424.1	transmembrane 4 superfamily member 6
ENST00000640889.1	alternative 5' UTR
ENST00000373004.5	MANE_select
ENST00000373004.5	sushi-repeat protein (SRPUL)
ENST00000481988.1	novel transcript
ENST00000372989.5	synaptotagmin-like 4 (granuphilin-a)
ENST00000491602.1	synaptotagmin-like 4 (granuphilin-a)
ENST00000263033.9	alternative 5' UTR
ENST00000263033.9	synaptotagmin-like 4 (granuphilin-a)
ENST00000372981.1	synaptotagmin-like 4 (granuphilin-a)
ENST00000491326.1	synaptotagmin-like 4 (granuphilin-a)
ENST00000372972.7	MANE_select
ENST00000372972.7	cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
ENST00000475126.5	cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
ENST00000413437.1	cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
ENST00000372966.8	MANE_select
ENST00000372966.8	NADPH oxidase 1
ENST00000372964.5	non canonical TEC
ENST00000427768.5	NADPH oxidase 1
ENST00000217885.5	NADPH oxidase 1
ENST00000372956.3	MANE_select
ENST00000450049.7	MANE_select
ENST00000372936.4	MANE_select
ENST00000372936.4	alternative 5' UTR
ENST00000478422.1	novel transcript
ENST00000488615.1	novel transcript
ENST00000372930.5	MANE_select
ENST00000372930.5	novel protein (FLJ14084)
ENST00000478351.1	novel transcript
ENST00000403304.6	FSH primary response (LRPR1 homolog, rat) 1
ENST00000435570.1	FSH primary response (LRPR1 homolog, rat) 1
ENST00000372926.5	FSH primary response (LRPR1 homolog, rat) 1
ENST00000372927.5	FSH primary response (LRPR1 homolog, rat) 1
ENST00000402866.5	alternative 5' UTR
ENST00000395209.8	MANE_select
ENST00000372907.7	TAF7-like RNA polymerase II, 50kDa TATA box binding protein (TBP)-associated factor
ENST00000324762.10	TAF7-like RNA polymerase II, 50kDa TATA box binding protein (TBP)-associated factor, variant 1 (FLJ23157)
ENST00000356784.2	MANE_select
ENST00000356784.2	TAF7-like RNA polymerase II, 50kDa TATA box binding protein (TBP)-associated factor
ENST00000356784.2	alternative 5' UTR
ENST00000356784.2	alternatively spliced 5' UTR, shares CDS with dJ738A13.1.1
ENST00000331267.5	ribosomal protein L21 (RPL21) pseudogene
ENST00000372902.4	CAGE supported TSS
ENST00000372902.4	LR annotation
ENST00000372902.4	MANE_select
ENST00000644112.2	CAGE supported TSS
ENST00000644112.2	LR annotation
ENST00000644112.2	NP_001139423.1
ENST00000308731.8	Bruton agammaglobulinemia tyrosine kinase
ENST00000308731.8	MANE_select
ENST00000470069.1	Bruton agammaglobulinemia tyrosine kinase
ENST00000470069.1	this variant and one or more of variant fragments .4.4 through .4.7 could be part of a single variant
ENST00000488970.1	Bruton agammaglobulinemia tyrosine kinase
ENST00000478995.1	Bruton agammaglobulinemia tyrosine kinase
ENST00000478995.1	this variant and one or more of variant fragments .4.3, .4.6 and .4.7 could be part of a single variant
ENST00000470329.1	Bruton agammaglobulinemia tyrosine kinase
ENST00000470329.1	this variant and one or more of variant fragments .4.3, .4.6 and .4.7 could be part of a single variant
ENST00000464006.1	Bruton agammaglobulinemia tyrosine kinase
ENST00000464006.1	this variant and one or more of variant fragments .4.3, .4.4, .4.5 and .4.7 could be part of a single variant
ENST00000464567.1	Bruton agammaglobulinemia tyrosine kinase
ENST00000464567.1	this variant and one or more of variant fragments .4.3 through .4.6 could be part of a single variant
ENST00000392994.7	CAGE supported TSS
ENST00000553110.8	CAGE supported TSS
ENST00000553110.8	MANE_select
ENST00000409338.5	CAGE supported TSS
ENST00000409170.3	CAGE supported TSS
ENST00000468823.2	galactosidase, alpha
ENST00000493905.6	galactosidase, alpha
ENST00000218516.4	LR annotation
ENST00000218516.4	MANE_select
ENST00000218516.4	galactosidase, alpha
ENST00000649178.1	Intron 1 supported by 474 reads in the intropolis data
ENST00000649178.1	Intron 2 supported by 390 reads
ENST00000675968.1	galactosidase, alpha
ENST00000675799.1	alternative 3' UTR
ENST00000486121.6	galactosidase, alpha
ENST00000480513.6	galactosidase, alpha
ENST00000316594.6	MANE_select
ENST00000423738.4	upstream ATG
ENST00000423738.4	upstream uORF
ENST00000372829.8	MANE_select
ENST00000497931.5	novel transcript
ENST00000361910.9	FLJ20811
ENST00000361910.9	MANE_select
ENST00000462302.5	novel transcript
ENST00000467089.1	novel transcript
ENST00000495964.1	novel transcript
ENST00000494624.1	novel transcript
ENST00000341189.8	ALEX3 protein (ALEX3)
ENST00000491568.6	alternative 5' UTR
ENST00000491568.6	novel transcript
ENST00000479298.5	alternative 5' UTR
ENST00000479298.5	novel transcript
ENST00000471229.7	MANE_select
ENST00000471229.7	alternative 5' UTR
ENST00000471229.7	novel transcript
ENST00000477980.6	novel transcript
ENST00000467808.5	novel transcript
ENST00000454228.1	putative novel transcript
ENST00000564612.2	confirm experimentally
ENST00000651012.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000330154.6	alternative 5' UTR
ENST00000330154.6	alternative 5' UTR; CDS shared with cV602D8.1.1, cV602D8.1.2, cV602D8.1.5, cV602D8.1.6, cV602D8.1.7, cV602D8.1.9 and cV602D8.1.10
ENST00000330154.6	armadillo repeat protein ALEX2 (ALEX2)
ENST00000328766.9	alternative 5' UTR
ENST00000328766.9	alternative 5' UTR; CDS shared with cV602D8.1.2, cV602D8.1.3, cV602D8.1.5, cV602D8.1.6, cV602D8.1.7, cV602D8.1.9 and cV602D8.1.10
ENST00000328766.9	armadillo repeat protein ALEX2 (ALEX2)
ENST00000356824.9	MANE_select
ENST00000356824.9	alternative 5' UTR
ENST00000356824.9	alternative 5' UTR; CDS shared with cV602D8.1.1, cV602D8.1.3, cV602D8.1.5, cV602D8.1.6, cV602D8.1.7, cV602D8.1.9 and cV602D8.1.10
ENST00000356824.9	armadillo repeat protein ALEX2 (ALEX2)
ENST00000413506.5	alternative 5' UTR
ENST00000413506.5	alternative 5' UTR; CDS shared with cV602D8.1.1, cV602D8.1.2, cV602D8.1.3, cV602D8.1.5, cV602D8.1.7, cV602D8.1.9 and cV602D8.1.10
ENST00000413506.5	armadillo repeat protein ALEX2 (ALEX2)
ENST00000433318.5	alternative 5' UTR
ENST00000433318.5	alternative 5' UTR; CDS shared with cV602D8.1.1, cV602D8.1.2, cV602D8.1.3, cV602D8.1.5, cV602D8.1.6, cV602D8.1.7 and cV602D8.1.9
ENST00000433318.5	armadillo repeat protein ALEX2 (ALEX2)
ENST00000440675.5	alternative 5' UTR
ENST00000440675.5	alternative 5' UTR; CDS shared with cV602D8.1.1, cV602D8.1.2, cV602D8.1.3, cV602D8.1.6, cV602D8.1.7, cV602D8.1.9 and cV602D8.1.10
ENST00000440675.5	armadillo repeat protein ALEX2 (ALEX2)
ENST00000458024.5	alternative 5' UTR
ENST00000458024.5	alternative 5' UTR; CDS shared with cV602D8.1.1, cV602D8.1.2, cV602D8.1.3, cV602D8.1.5, cV602D8.1.6, cV602D8.1.9 and cV602D8.1.10
ENST00000458024.5	armadillo repeat protein ALEX2 (ALEX2)
ENST00000467416.1	putative novel transcript
ENST00000431597.5	alternative 5' UTR
ENST00000431597.5	alternative 5' UTR; CDS shared with cV602D8.1.1, cV602D8.1.2, cV602D8.1.3, cV602D8.1.5, cV602D8.1.6, cV602D8.1.7 and cV602D8.1.10
ENST00000431597.5	armadillo repeat protein ALEX2 (ALEX2)
ENST00000479333.5	novel transcript
ENST00000496581.1	novel transcript
ENST00000488982.1	putative novel transcript
ENST00000475854.1	putative novel transcript
ENST00000328462.7	glycerol kinase (GK) pseudogene
ENST00000537026.6	NP_116564.2
ENST00000372782.4	novel protein (KIAA1789)
ENST00000494068.1	novel transcript
ENST00000488347.5	novel transcript
ENST00000490757.2	novel transcript
ENST00000436830.1	novel pseudogene
ENST00000372780.6	MANE_select
ENST00000372780.6	genebuild_only_MANE
ENST00000476749.1	novel transcript
ENST00000329035.2	my048 protein
ENST00000651085.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000372774.7	novel protein similar to my048 protein (my048)
ENST00000372773.1	alternative 5' UTR
ENST00000372773.1	novel protein similar to my048 protein (my048)
ENST00000660526.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000333643.4	MANE_select
ENST00000333643.4	novel protein (LOC340542)
ENST00000484837.1	novel transcript
ENST00000625106.4	MANE_select
ENST00000618302.2	novel protein similar to nuclear RNA export factor 2 (NXF2)
ENST00000602195.5	novel protein similar to nuclear RNA export factor 2 (NXF2)
ENST00000489531.1	novel transcript
ENST00000289373.5	MANE_select
ENST00000473968.5	alternative 5' UTR
ENST00000604957.1	alternative 5' UTR
ENST00000477663.5	alternative 5' UTR
ENST00000479502.1	alternative 5' UTR
ENST00000372742.1	alternative 5' UTR
ENST00000465548.1	novel transcript
ENST00000460026.6	novel transcript
ENST00000671383.1	Assembled from SLRseq reads (SRP049776)
ENST00000652542.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000652542.1	alternative 5' UTR
ENST00000537097.2	MANE_select
ENST00000537097.2	genebuild_only_MANE
ENST00000663390.1	Assembled from SLRseq reads (SRP049776)
ENST00000483720.5	novel transcript
ENST00000486814.1	novel transcript
ENST00000652409.1	ID: align_id:3770903|asmbl_261068
ENST00000483294.5	novel transcript
ENST00000457056.6	CAGE supported TSS
ENST00000457056.6	MANE_select
ENST00000486988.1	novel transcript
ENST00000372735.1	novel protein (KIAA1701)
ENST00000661018.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664568.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000431616.5	novel transcript
ENST00000668536.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000440496.5	novel transcript
ENST00000420471.5	novel transcript
ENST00000420471.5	this variant and variant fragment .11.2 could be part of one single variant
ENST00000663114.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658813.1	Assembled from SLRseq reads (SRP049776)
ENST00000435966.1	novel transcript
ENST00000656628.1	Assembled from SLRseq reads (SRP049776)
ENST00000666631.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670178.1	Assembled from SLRseq reads (SRP049776)
ENST00000416381.1	novel transcript
ENST00000416381.1	this variant and variant fragment .11.3 could be part of one single variant
ENST00000658880.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000457611.1	mitochondrial NADH dehydrogenase 6 (MTND6) pseudogene
ENST00000426528.5	novel transcript
ENST00000429932.1	novel transcript
ENST00000218249.7	MANE_select
ENST00000413528.1	putative novel transcript
ENST00000661188.1	Assembled from SLRseq reads (SRP049776)
ENST00000372728.4	MANE_select
ENST00000372728.4	brain expressed, X-linked 1
ENST00000395065.8	MANE_select
ENST00000395065.8	nuclear RNA export factor 3
ENST00000497850.5	nuclear RNA export factor 3
ENST00000468528.5	nuclear RNA export factor 3
ENST00000470724.5	nuclear RNA export factor 3
ENST00000427570.1	nuclear RNA export factor 3
ENST00000494300.1	nuclear RNA export factor 3
ENST00000460791.1	nuclear RNA export factor 3
ENST00000440243.2	novel pseudogene
ENST00000372695.6	MANE_select
ENST00000372695.6	novel Brain expressed X-linked like family protein (FLJ10097)
ENST00000372691.3	novel Brain expressed X-linked like family protein (FLJ10097)
ENST00000372685.8	MANE_select
ENST00000372685.8	alternative 5' UTR
ENST00000372685.8	alternative 5' UTR; shares CDS with cU177E8.3.2
ENST00000372685.8	novel protein (MGC45400)
ENST00000360000.8	alternative 5' UTR
ENST00000360000.8	alternative 5' UTR; shares CDS with cU177E8.3.1
ENST00000360000.8	novel protein (MGC45400)
ENST00000451678.1	novel protein (MGC45400)
ENST00000372680.2	MANE_select
ENST00000372680.2	novel protein
ENST00000372677.8	MANE_select
ENST00000372677.8	X-linked protein
ENST00000372677.8	alternative 5' UTR
ENST00000372677.8	alternative 5' UTR; shares CDS with dJ79P11.1.2 and dJ79P11.1.3
ENST00000372674.5	X-linked protein
ENST00000372674.5	alternative 5' UTR
ENST00000372674.5	alternative 5' UTR; shares CDS with dJ79P11.1.1 and dJ79P11.1.3
ENST00000449185.1	X-linked protein
ENST00000449185.1	alternative 5' UTR
ENST00000449185.1	alternative 5' UTR; shares CDS with dJ79P11.1.1 and dJ79P11.1.2
ENST00000372666.1	novel protein
ENST00000332431.5	MANE_select
ENST00000332431.5	novel protein (MGC23947)
ENST00000372656.5	alternative 5' UTR
ENST00000372661.6	MANE_select
ENST00000646896.1	alternative 5' UTR
ENST00000372645.3	alternative 5' UTR
ENST00000372645.3	alternatively spliced 5' UTR; shares CDS with bB349O20.1.3
ENST00000372645.3	nerve growth factor receptor (TNFRSF16) associated protein 1
ENST00000372635.1	alternative 5' UTR
ENST00000372635.1	alternatively spliced 5' UTR; shares CDS with bB349O20.1.1
ENST00000372635.1	nerve growth factor receptor (TNFRSF16) associated protein 1
ENST00000361298.9	MANE_select
ENST00000361298.9	alternative 5' UTR
ENST00000361298.9	alternatively spliced 5' UTR; shares CDS with bB349O20.1.4
ENST00000361298.9	nerve growth factor receptor (TNFRSF16) associated protein 1
ENST00000372634.1	alternative 5' UTR
ENST00000372634.1	alternatively spliced 5' UTR; shares CDS with bB349O20.1.2
ENST00000372634.1	nerve growth factor receptor (TNFRSF16) associated protein 1
ENST00000629535.3	Assembled from SLRseq reads (SRP049776)
ENST00000629535.3	CAGE supported TSS
ENST00000667819.1	Assembled from SLRseq reads (SRP049776)
ENST00000658164.1	Assembled from SLRseq reads (SRP049776)
ENST00000304236.2	MANE_select
ENST00000372633.1	alternative 5' UTR
ENST00000655887.1	Assembled from SLRseq reads (SRP049776)
ENST00000468024.5	alternative 5' UTR
ENST00000415568.2	alternative 5' UTR
ENST00000472484.6	MANE_select
ENST00000472484.6	alternative 5' UTR
ENST00000490644.5	alternative 5' UTR
ENST00000459722.1	alternative 5' UTR
ENST00000494801.5	alternative 5' UTR
ENST00000434216.2	alternative 5' UTR
ENST00000425011.1	alternative 5' UTR
ENST00000469586.1	alternative 5' UTR
ENST00000372628.5	novel protein (MGC15737)
ENST00000372627.10	MANE_select
ENST00000372627.10	novel protein (MGC15737)
ENST00000477014.1	novel transcript
ENST00000424887.1	novel transcript
ENST00000372626.7	transcription elongation factor A (SII)-like 1
ENST00000372625.8	MANE_select
ENST00000372625.8	transcription elongation factor A (SII)-like 1
ENST00000469820.1	transcription elongation factor A (SII)-like 1
ENST00000372624.3	transcription elongation factor A (SII)-like 1
ENST00000360458.5	mortality factor 4 like 2
ENST00000441076.7	MANE_select
ENST00000441076.7	alternative 5' UTR
ENST00000441076.7	mortality factor 4 like 2
ENST00000451301.5	alternative 5' UTR
ENST00000433176.6	alternative 5' UTR
ENST00000434230.5	alternative 5' UTR
ENST00000434230.5	mortality factor 4 like 2
ENST00000418819.5	alternative 5' UTR
ENST00000418819.5	mortality factor 4 like 2
ENST00000442614.5	alternative 5' UTR
ENST00000442614.5	mortality factor 4 like 2
ENST00000492116.5	mortality factor 4 like 2
ENST00000422355.5	alternative 5' UTR
ENST00000422355.5	mortality factor 4 like 2
ENST00000474653.5	mortality factor 4 like 2
ENST00000467755.5	mortality factor 4 like 2
ENST00000498064.1	mortality factor 4 like 2
ENST00000488331.1	mortality factor 4 like 2
ENST00000435306.1	novel transcript
ENST00000674329.1	NAGNAG splice site
ENST00000674266.1	NAGNAG splice site
ENST00000319560.7	MANE_select
ENST00000319560.7	novel protein (MGC39655)
ENST00000434483.5	alternative 5' UTR
ENST00000494475.5	alternative 5' UTR
ENST00000455268.5	alternative 5' UTR
ENST00000422393.5	alternative 5' UTR
ENST00000433491.5	alternative 5' UTR
ENST00000443502.5	alternative 5' UTR
ENST00000621218.5	MANE_select
ENST00000465975.1	NMD likely if extended
ENST00000495678.5	alternative 5' UTR
ENST00000243298.3	MANE_select
ENST00000243298.3	RAB9B, member RAS oncogene family
ENST00000653685.2	Assembled from SLRseq reads (SRP049776)
ENST00000614615.2	novel transcript
ENST00000540220.6	MANE_select
ENST00000540220.6	genebuild_only_MANE
ENST00000436583.5	alternative 5' UTR
ENST00000569577.1	alternative 5' UTR
ENST00000422550.2	histone H2B pseudogene
ENST00000675318.2	MANE_select
ENST00000594199.3	MANE_select
ENST00000467290.1	novel transcript
ENST00000423478.1	novel transcript
ENST00000537356.3	confirm experimentally
ENST00000650639.1	MANE_select
ENST00000650639.1	genebuild_only_MANE
ENST00000493442.2	MANE_select
ENST00000493442.2	novel protein (LOC139231)
ENST00000299906.5	novel transcript
ENST00000372588.4	MANE_select
ENST00000372582.6	MANE_select
ENST00000372582.6	interleukin 1 receptor accessory protein-like 2
ENST00000485671.1	interleukin 1 receptor accessory protein-like 2
ENST00000417685.1	ribosomal protein L18a (RPL18A) pseudogene
ENST00000600991.6	MANE_select
ENST00000600991.6	testis expressed sequence 13A
ENST00000609007.3	alternative 5' UTR
ENST00000609007.3	testis expressed sequence 13A
ENST00000243300.14	DKFZp686A17109
ENST00000243300.14	It seems this protein is expressed during the late stages of embryogenesis but not in adult tissues. See Nakano et. al PMID: 10801798
ENST00000243300.14	MANE_select
ENST00000243300.14	non canonical conserved
ENST00000243300.14	non-canonical acceptor splice site between exons 24 and 25
ENST00000428173.3	CAGE supported TSS
ENST00000372563.2	MANE_select
ENST00000372563.2	serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
ENST00000327674.8	serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
ENST00000487487.1	serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
ENST00000357175.6	MANE_select
ENST00000357175.6	novel protein
ENST00000372552.1	alternative 5' UTR
ENST00000372552.1	novel protein (FLJ31916)
ENST00000443077.1	serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin) member 7 (SERPINA7) pseudogene
ENST00000461251.5	novel protein (FLJ10178)
ENST00000372548.9	MANE_select
ENST00000372548.9	novel protein
ENST00000421550.1	novel protein (FLJ10178)
ENST00000478395.1	novel transcript
ENST00000497124.1	novel transcript
ENST00000418562.5	ring finger protein 128
ENST00000324342.7	ring finger protein 128
ENST00000255499.3	MANE_select
ENST00000255499.3	ring finger protein 128
ENST00000357242.10	MANE_select
ENST00000310452.6	NP_942582
ENST00000355610.9	FLJ11565
ENST00000355610.9	MANE_select
ENST00000255495.7	NP_001078823
ENST00000276173.5	MANE_select
ENST00000276173.5	NP_612391
ENST00000276173.5	novel protein (LOC92129)
ENST00000411805.1	novel protein
ENST00000336803.2	MANE_select
ENST00000372487.5	novel protein (FLJ11016)
ENST00000495517.5	novel protein
ENST00000474499.1	novel transcript
ENST00000372479.7	novel protein
ENST00000434854.1	novel protein
ENST00000475556.1	novel transcript
ENST00000485676.5	novel transcript
ENST00000471079.1	novel transcript
ENST00000372466.8	MANE_select
ENST00000372466.8	novel protein (FLJ20130)
ENST00000484614.5	novel protein
ENST00000432145.5	novel protein
ENST00000421752.1	novel protein
ENST00000372453.8	MANE_select
ENST00000673764.1	alternative 5' UTR
ENST00000336387.4	novel protein (MGC35261)
ENST00000415252.1	putative novel transcript
ENST00000439554.1	includes KIAA1817
ENST00000675304.1	Snaptron_GTEX
ENST00000675304.1	intropolis_filtered
ENST00000372435.10	LR annotation
ENST00000372435.10	MANE_select
ENST00000674826.1	Snaptron_GTEX
ENST00000372419.3	phosphoribosyl pyrophosphate synthetase 1 (PRSI)
ENST00000674525.1	HsBN_lib6:Read_303939-Barcode%3DBC148:length%3D883
ENST00000674525.1	SLR-seq_HsBN_lib6
ENST00000676092.1	intropolis_filtered
ENST00000674843.1	intropolis_filtered
ENST00000675720.1	NAGNAG splice site
ENST00000675720.1	intropolis_filtered
ENST00000675046.1	Snaptron_GTEX
ENST00000675046.1	intropolis_filtered
ENST00000675921.1	Snaptron_GTEX
ENST00000675921.1	intropolis_filtered
ENST00000675630.1	Snaptron_GTEX
ENST00000675630.1	intropolis_filtered
ENST00000675124.1	Snaptron_GTEX
ENST00000675124.1	intropolis_filtered
ENST00000675082.1	intropolis_filtered
ENST00000675353.1	Snaptron_GTEX
ENST00000675353.1	intropolis_filtered
ENST00000676365.1	Snaptron_GTEX
ENST00000676365.1	intropolis_filtered
ENST00000675875.1	intropolis_filtered
ENST00000372428.9	Snaptron_GTEX
ENST00000372428.9	intropolis_filtered
ENST00000676322.1	Snaptron_GTEX_
ENST00000676322.1	alternative 3' UTR
ENST00000676322.1	intropolis_filtered
ENST00000675263.1	Snaptron_GTEX
ENST00000675263.1	alternative 3' UTR
ENST00000675263.1	intropolis_filtered
ENST00000372390.8	NP_001015881
ENST00000315660.8	alternative 5' UTR
ENST00000372384.6	alternative 5' UTR
ENST00000506081.5	alternative 5' UTR
ENST00000486554.1	alternative 5' UTR
ENST00000514897.5	alternative 5' UTR
ENST00000510887.5	alternative 5' UTR
ENST00000502650.1	alternative 5' UTR
ENST00000506724.1	alternative 5' UTR
ENST00000505965.1	alternative 5' UTR
ENST00000502961.1	alternative 5' UTR
ENST00000639756.1	alternative 5' UTR
ENST00000509000.3	MANE_select
ENST00000509000.3	novel protein similar to nuclear cap binding protein subunit 2 (NCBP2)
ENST00000262843.11	MANE_select
ENST00000262843.11	NP_036348.2
ENST00000443968.2	NP_438112.2
ENST00000663626.1	Assembled from SLRseq reads (SRP049776)
ENST00000430140.2	Assembled from SLRseq reads (SRP049776)
ENST00000430140.2	novel transcript
ENST00000670461.1	Assembled from SLRseq reads (SRP049776)
ENST00000661635.1	Assembled from SLRseq reads (SRP049776)
ENST00000302917.1	MANE_select
ENST00000302917.1	testis expressed sequence 13B
ENST00000217957.10	MANE_select
ENST00000217958.8	MANE_select
ENST00000217958.8	proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 (p28)
ENST00000372296.5	proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 (p28)
ENST00000372295.5	proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 (p28)
ENST00000361815.9	proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 (p28)
ENST00000340200.5	proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 (p28)
ENST00000338548.4	proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 (p28)
ENST00000372232.8	MANE_select
ENST00000343524.9	FLJ30365
ENST00000372216.8	Collagen, type IV, alpha 6
ENST00000372216.8	NP_001838
ENST00000334504.12	Collagen, type IV, alpha 6
ENST00000334504.12	MANE_select
ENST00000334504.12	NP_378667
ENST00000477085.1	Collagen, type IV, alpha 6
ENST00000328300.11	MANE_select
ENST00000483338.1	CAGE supported TSS
ENST00000372129.4	CAGE supported TSS
ENST00000372129.4	MANE_select
ENST00000564206.2	insulin receptor substrate 4
ENST00000668534.1	Assembled from SLRseq reads (SRP049776)
ENST00000656850.1	Assembled from SLRseq reads (SRP049776)
ENST00000664433.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664433.1	Assembled from SLRseq reads (SRP049776)
ENST00000436013.2	Assembled from SLRseq reads (SRP049776)
ENST00000436013.2	novel transcript
ENST00000218006.3	MANE_select
ENST00000218006.3	guanylate cyclase 2F retinal
ENST00000218004.5	nuclear transport factor 2-like export factor 2
ENST00000372107.5	nuclear transport factor 2-like export factor 2
ENST00000372106.6	MANE_select
ENST00000372106.6	nuclear transport factor 2-like export factor 2
ENST00000372103.1	nuclear transport factor 2-like export factor 2
ENST00000372101.3	CAGE supported TSS
ENST00000372101.3	LR annotation
ENST00000372101.3	MANE_select
ENST00000469796.7	CAGE supported TSS
ENST00000469796.7	LR annotation
ENST00000672401.1	CAGE supported TSS
ENST00000672401.1	LR annotation
ENST00000672401.1	MANE_select
ENST00000671846.1	alternative 5' UTR
ENST00000672282.1	alternative 5' UTR
ENST00000502391.6	alternative 5' UTR
ENST00000673016.1	alternative 5' UTR
ENST00000673016.1	upstream ATG
ENST00000505855.1	alternative 5' UTR
ENST00000508092.5	alternative 5' UTR
ENST00000469857.1	alternative 5' UTR
ENST00000497754.1	novel transcript
ENST00000497754.1	this variant and variant fragment .1.6 could be part of a single variant
ENST00000471255.5	novel transcript
ENST00000372073.5	novel protein
ENST00000372068.7	MANE_select
ENST00000372068.7	genebuild_only_MANE
ENST00000288381.4	novel protein (FLJ22679)
ENST00000461715.1	novel transcript
ENST00000461715.1	this variant and variant fragment .1.5 could be part of a single variant
ENST00000464177.1	novel transcript
ENST00000262844.10	MANE_select
ENST00000372057.1	GenBank: BAG52359.1
ENST00000473662.1	Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region, gene 1
ENST00000496695.1	Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region, gene 1
ENST00000418848.1	putative novel transcript
ENST00000520821.5	alternative 5' UTR
ENST00000656084.1	Assembled from SLRseq reads (SRP049776)
ENST00000493351.1	t
ENST00000372045.5	likely ortholog of mouse neuralin 1 (NRLN1)
ENST00000372042.6	MANE_select
ENST00000372042.6	NP_001137453.1
ENST00000372042.6	likely ortholog of mouse neuralin 1 (NRLN1)
ENST00000394797.8	NP_660277.2
ENST00000444321.2	NP_001137454.1
ENST00000372007.10	MANE_select
ENST00000484442.5	p21 (CDKN1A)-activated kinase 3
ENST00000372010.5	p21 (CDKN1A)-activated kinase 3
ENST00000519681.5	NP_001121644
ENST00000518291.5	NP_001121640
ENST00000429193.5	p21 (CDKN1A)-activated kinase 3
ENST00000487802.1	p21 (CDKN1A)-activated kinase 3
ENST00000324068.2	MANE_select
ENST00000324068.2	calpain 6
ENST00000371993.7	NP_001356302.1
ENST00000358070.10	alternative 5' UTR
ENST00000358070.10	upstream ATG
ENST00000636035.2	MANE_select
ENST00000636035.2	NP_001182482.1
ENST00000636035.2	alternative 5' UTR
ENST00000636035.2	non canonical conserved
ENST00000635795.1	alternative 5' UTR
ENST00000637570.1	NP_001356301.1
ENST00000637570.1	non canonical conserved
ENST00000356220.8	NP_001182482.1
ENST00000356220.8	alternative 5' UTR
ENST00000356220.8	doublecortex; lissencephaly, X-linked (doublecortin)
ENST00000356220.8	non canonical conserved
ENST00000488120.2	Swiss-Prot isoform: O43602-2.4
ENST00000488120.2	doublecortex; lissencephaly, X-linked (doublecortin)
ENST00000637453.1	NP_001182482.1
ENST00000637453.1	alternative 5' UTR
ENST00000637453.1	doublecortex; lissencephaly, X-linked (doublecortin)
ENST00000637453.1	non canonical conserved
ENST00000496551.2	doublecortex; lissencephaly, X-linked (doublecortin)
ENST00000496551.2	upstream ATG
ENST00000636381.2	alternative 5' UTR
ENST00000468911.2	alternative 5' UTR
ENST00000448271.1	novel pseudogene (PRO1843)
ENST00000430258.2	60S ribosomal protein 18A (RPL18A) pseudogene
ENST00000371979.7	NP_060936.1
ENST00000622997.3	alternative 3' UTR
ENST00000394780.8	MANE_select
ENST00000394780.8	NP_001093392.1
ENST00000624161.3	FLJ23018, FLJ50394
ENST00000468657.5	alternative 3' UTR
ENST00000468657.5	novel transcript
ENST00000482374.5	novel transcript
ENST00000492038.5	novel transcript
ENST00000495283.5	alternative 5' UTR
ENST00000623144.3	alternative 3' UTR
ENST00000623144.3	novel transcript
ENST00000470971.5	alternative 3' UTR
ENST00000489033.5	alternative 3' UTR
ENST00000489033.5	novel transcript
ENST00000471924.5	alternative 3' UTR
ENST00000623148.3	alternative 3' UTR
ENST00000436609.5	CAGE supported TSS
ENST00000436609.5	NP_001244166.1
ENST00000436609.5	confirm experimentally
ENST00000482742.5	NP_001244164.1
ENST00000482742.5	novel transcript
ENST00000623189.1	alternative 5' UTR
ENST00000490774.2	NMD likely if extended
ENST00000460092.2	NMD likely if extended
ENST00000262839.3	MANE_select
ENST00000262839.3	transient receptor potential cation channel, subfamily C, member 5
ENST00000612026.5	alternative 5' UTR
ENST00000635763.2	MANE_select
ENST00000635763.2	alternative 5' UTR
ENST00000371970.2	novel transcript
ENST00000371968.8	MANE_select
ENST00000371968.8	lipoma HMGIC fusion-partner-like (LOC340596)
ENST00000478229.1	lipoma HMGIC fusion-partner-like (LOC340596)
ENST00000304758.5	angiomotin
ENST00000371959.8	NP_001106962.1
ENST00000462114.1	angiomotin
ENST00000651919.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000441559.1	novel pseudogene similar to PRO2831
ENST00000663700.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000457667.2	novel pseudogene
ENST00000403700.2	peptidyl-prolyl isomerase G (cyclophilin G) (PPIG) pseudogene
ENST00000468762.3	CAGE supported TSS
ENST00000468762.3	novel transcript
ENST00000449911.2	novel pseudogene
ENST00000371951.5	5-hydroxytryptamine (serotonin) receptor 2C
ENST00000371950.3	5-hydroxytryptamine (serotonin) receptor 2C
ENST00000276198.6	5-hydroxytryptamine (serotonin) receptor 2C
ENST00000276198.6	alternative 5' UTR
ENST00000432891.2	ribosomal protein L36a (RPL36A) pseudogene
ENST00000443628.2	heat shock 70kDa protein 8 (HSPA8) pseudogene
ENST00000371936.5	interleukin 13 receptor alpha 2
ENST00000243213.2	MANE_select
ENST00000243213.2	genebuild_only_MANE
ENST00000468224.1	interleukin 13 receptor alpha 2
ENST00000418638.1	zinc finger protein 33a (ZNF33A) pseudogene
ENST00000455104.1	yes-associated protein 1 65kDa (YAP1) pseudogene
ENST00000317135.13	MANE_select
ENST00000317135.13	NP_065922
ENST00000424776.5	MANE_select
ENST00000419316.1	ribosomal protein L36 (RPL36) pseudogene
ENST00000371920.4	HOM-TES-85 tumor antigen (HOM-TES-85)
ENST00000371920.4	MANE_select
ENST00000371921.5	HOM-TES-85 tumor antigen (HOM-TES-85)
ENST00000619615.1	alpha tubulin pseudogene
ENST00000489283.5	plastin 3 (T isoform)
ENST00000355899.8	MANE_select
ENST00000355899.8	plastin 3 (T isoform)
ENST00000539310.5	alternative 5' UTR
ENST00000435496.1	argininosuccinate synthetase pseudogene 5
ENST00000664355.1	Assembled from SLRseq reads (SRP049776)
ENST00000664453.1	Assembled from SLRseq reads (SRP049776)
ENST00000664164.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000430756.2	novel transcript
ENST00000434365.1	Elongation factor 1-gamma (LOC136337) pseudogene
ENST00000418396.1	aldo-keto reductase family 1, member B1 (aldose reductase) (AKR1B1) pseudogene
ENST00000424316.1	apoptosis inhibitor 5 (API5) pseudogene
ENST00000371906.5	MANE_select
ENST00000371906.5	angiotensin II receptor, type 2
ENST00000681852.1	alternative 5' UTR
ENST00000598581.3	MANE_select
ENST00000598581.3	solute carrier family 6 (neurotransmitter transporter), member 14
ENST00000463626.1	solute carrier family 6 (neurotransmitter transporter), member 14
ENST00000371894.5	MANE_select
ENST00000371894.5	novel protein (LOC203413)
ENST00000428194.1	pseudogene similar to part of solute carrier family 6 (neurotransmitter transporter), member 14 (SLC6A14)
ENST00000424402.1	pseudogene similar to part of solute carrier family 6 (neurotransmitter transporter), member 14 (SLC6A14)
ENST00000446495.1	putative novel transcript
ENST00000435341.1	SET translocation (myeloid leukemia-associated) (SET) pseudogene
ENST00000438228.1	novel pseudogene
ENST00000447458.1	pseudogene similar to part of TCERG1 (transcription elongation regulator 1 (CA150))
ENST00000371882.5	alternative 5' UTR
ENST00000371876.5	alternative 5' UTR
ENST00000371878.5	alternative 5' UTR
ENST00000371878.5	upstream_ATG-9 and upstream_ATG-46
ENST00000453826.1	alternative 5' UTR
ENST00000436163.2	novel pseudogene
ENST00000254029.8	MANE_select
ENST00000254029.8	novel protein similar to rab11-binding protein (DKFZp686L20145)
ENST00000371825.7	novel protein similar to rab11-binding protein
ENST00000493448.1	novel transcript
ENST00000371848.3	novel protein similar to rab11-binding protein
ENST00000276202.9	CCDS35373.1
ENST00000276202.9	MANE_select
ENST00000276202.9	NP_653259.3
ENST00000276204.10	CCDS35373.1
ENST00000276204.10	novel protein similar to zizimin1 (FLJ32122)
ENST00000449447.1	retinoblastoma binding protein 8 (RBBP8) pseugdogene
ENST00000652600.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000371642.1	interleukin 13 receptor, alpha 1 (NR4, IL-13RA, IL-13Ra)
ENST00000371666.8	MANE_select
ENST00000371666.8	interleukin 13 receptor, alpha 1 (NR4, IL-13RA, IL-13Ra)
ENST00000481868.1	interleukin 13 receptor, alpha 1 (NR4, IL-13RA, IL-13Ra)
ENST00000506969.1	novel pseudogene
ENST00000310164.3	MANE_select
ENST00000310164.3	novel protein (LOC170261)
ENST00000655074.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655074.1	novel transcript
ENST00000412422.7	Assembled from SLRseq reads (SRP049776)
ENST00000661086.1	Assembled from SLRseq reads (SRP049776)
ENST00000657695.1	Assembled from SLRseq reads (SRP049776)
ENST00000657870.1	Assembled from SLRseq reads (SRP049776)
ENST00000661672.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667717.1	Assembled from SLRseq reads (SRP049776)
ENST00000656178.1	Assembled from SLRseq reads (SRP049776)
ENST00000666896.1	Assembled from SLRseq reads (SRP049776)
ENST00000445747.1	aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase) (AKR7A2) pseudogene
ENST00000443421.1	pseudogene similar to part of KIAA0633 protein (COBL)
ENST00000481285.5	ring finger protein 127, variant 3 (FLJ34458)
ENST00000371628.8	MANE_select
ENST00000439603.5	ring finger protein 127, variant 2 (FLJ22612)
ENST00000472173.5	ring finger protein 127, variant 4 (FLJ40322)
ENST00000418991.1	ADP-ribosylation factor-like 5 (ARL5) pseudogene
ENST00000424481.1	heterogeneous nuclear ribonucleoprotein A1 (HNRPA1) pseudogene
ENST00000217971.8	MANE_select
ENST00000217971.8	progesterone receptor membrane component 1
ENST00000428222.1	novel transcript
ENST00000413240.1	novel transcript
ENST00000217909.8	MANE_select
ENST00000217909.8	novel protein (LOC203427)
ENST00000488158.5	QC splicing correct
ENST00000488158.5	non canonical TEC
ENST00000493093.5	novel transcript
ENST00000484058.1	novel transcript
ENST00000414435.1	putative novel transcript
ENST00000665871.1	Assembled from SLRseq reads (SRP049776)
ENST00000446986.1	novel transcript
ENST00000668529.1	Assembled from SLRseq reads (SRP049776)
ENST00000666209.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000445759.1	novel transcript
ENST00000317881.9	MANE_select
ENST00000320339.8	novel protein (FLJ22965)
ENST00000644802.2	MANE_select
ENST00000469448.1	novel transcript
ENST00000625938.2	NP_861427.1
ENST00000371558.7	MANE_select
ENST00000628549.1	NP_001269090.1
ENST00000649446.1	NF-kappa B-repressing factor (ITBA4) (NRF)
ENST00000304449.8	sequence error
ENST00000487600.1	novel transcript
ENST00000360156.11	septin 6 (SEP2, KIAA0128, MGC16619, MGC20339) (SEPT6)
ENST00000354228.8	septin 6 (SEP2, KIAA0128, MGC16619, MGC20339) (SEPT6)
ENST00000460411.5	septin 6 (SEP2, KIAA0128, MGC16619, MGC20339) (SEPT6)
ENST00000489216.5	septin 6 (SEP2, KIAA0128, MGC16619, MGC20339) (SEPT6)
ENST00000394610.7	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000394610.7	MANE_select
ENST00000354416.7	septin 6 (SEP2, KIAA0128, MGC16619, MGC20339) (SEPT6)
ENST00000343984.5	septin 6 (SEP2, KIAA0128, MGC16619, MGC20339) (SEPT6)
ENST00000467310.1	septin 6 (SEP2, KIAA0128, MGC16619, MGC20339) (SEPT6)
ENST00000481072.1	septin 6 (SEP2, KIAA0128, MGC16619, MGC20339) (SEPT6)
ENST00000343905.5	MANE_select
ENST00000477403.1	ribosomal protein L39
ENST00000361575.4	MANE_select
ENST00000468844.1	ribosomal protein L39
ENST00000654639.1	Assembled from SLRseq reads (SRP049776)
ENST00000636792.1	non canonical TEC
ENST00000276201.7	MANE_select
ENST00000478840.1	UPF3 regulator of nonsense transcripts homolog B (yeast) (UPF3X, HUPF3B, RENT3B)
ENST00000371442.4	MANE_select
ENST00000371437.5	MANE_select
ENST00000371431.8	MANE_select
ENST00000334356.2	A-kinase anchoring protein 28 (AKAP28)
ENST00000491105.1	novel transcript
ENST00000371410.5	MANE_select
ENST00000371410.5	novel protein (FLJ22626)
ENST00000455986.1	putative novel transcript
ENST00000477789.5	novel transcript
ENST00000652253.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000652253.1	NAGNAG splice site
ENST00000482407.1	novel transcript
ENST00000640298.1	non canonical TEC
ENST00000665317.1	Assembled from SLRseq reads (SRP049776)
ENST00000371402.5	MANE_select
ENST00000217999.3	MANE_select
ENST00000650818.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_noHiSeq
ENST00000371388.5	MANE_select
ENST00000403720.2	novel pseudogene
ENST00000557385.2	MANE_select
ENST00000557385.2	alternative 5' UTR
ENST00000309720.9	novel protein (FLJ20716)
ENST00000371369.9	MANE_select
ENST00000371369.9	novel protein
ENST00000371352.5	novel protein
ENST00000519908.1	NP_001098015
ENST00000480821.1	novel transcript
ENST00000439244.1	prefoldin 4 (PFDN4) pseudogene
ENST00000218008.8	MANE_select
ENST00000361319.3	ATPase, (Na+)/K+ transporting, beta 4 polypeptide
ENST00000200639.9	MANE_select
ENST00000200639.9	lysosomal-associated membrane protein 2 (LAMPB, CD107b)
ENST00000434600.6	NP_001116078
ENST00000486593.5	lysosomal-associated membrane protein 2 (LAMPB, CD107b)
ENST00000371335.4	lysosomal-associated membrane protein 2 (LAMPB, CD107b)
ENST00000680673.1	cullin 4B
ENST00000680673.1	non canonical conserved
ENST00000681189.1	non canonical conserved
ENST00000681080.1	non canonical conserved
ENST00000680918.1	non canonical conserved
ENST00000371322.11	CAGE supported TSS
ENST00000371322.11	LR annotation
ENST00000371322.11	MANE_select
ENST00000371322.11	Swiss-Prot isoform: Q13620-2.4
ENST00000371322.11	non canonical conserved
ENST00000679927.1	184020    183990
ENST00000679927.1	CAGE supported TSS
ENST00000679927.1	cullin 4B (KIAA0695)
ENST00000679927.1	non canonical conserved
ENST00000681253.1	alternative 5' UTR
ENST00000681253.1	non canonical conserved
ENST00000371323.3	CAGE supported TSS
ENST00000371323.3	non canonical conserved
ENST00000679405.1	CAGE supported TSS
ENST00000679405.1	non canonical U12
ENST00000679405.1	non canonical conserved
ENST00000681333.1	CAGE supported TSS
ENST00000681333.1	cullin 4B
ENST00000681333.1	non canonical conserved
ENST00000336592.11	CAGE supported TSS
ENST00000336592.11	LR annotation
ENST00000336592.11	NP_001317553.1
ENST00000336592.11	non canonical conserved
ENST00000681206.1	CAGE supported TSS
ENST00000681206.1	non canonical U12
ENST00000681206.1	non canonical conserved
ENST00000680577.1	non canonical conserved
ENST00000680324.1	non canonical conserved
ENST00000674137.11	CAGE supported TSS
ENST00000674137.11	non canonical conserved
ENST00000680457.1	non canonical conserved
ENST00000673919.1	CAGE supported TSS
ENST00000673919.1	non canonical conserved
ENST00000680165.1	non canonical conserved
ENST00000674073.2	non canonical conserved
ENST00000679844.1	non canonical conserved
ENST00000681090.1	non canonical conserved
ENST00000681908.1	non canonical conserved
ENST00000681652.1	CAGE supported TSS
ENST00000681652.1	alternative 5' UTR
ENST00000681652.1	non canonical conserved
ENST00000679432.1	non canonical U12
ENST00000679432.1	non canonical conserved
ENST00000680474.1	non canonical conserved
ENST00000681864.1	non canonical conserved
ENST00000404115.8	non canonical conserved
ENST00000681869.1	non canonical conserved
ENST00000486604.1	cullin 4B
ENST00000493879.5	novel transcript
ENST00000493274.5	novel transcript
ENST00000371317.10	MANE_select
ENST00000371317.10	MCT-1 protein (MCT-1)
ENST00000371315.3	MCT-1 protein (MCT-1)
ENST00000487133.1	novel transcript
ENST00000484481.1	novel transcript
ENST00000304661.6	MANE_select
ENST00000427955.1	novel pseudogene
ENST00000613352.1	not best-in-genome evidence
ENST00000457020.3	MANE_select
ENST00000434883.3	MANE_select
ENST00000424220.1	E-cadherin binding protein E7 (HAKAI) pseudogene
ENST00000328078.3	MANE_select
ENST00000328078.3	glutamate dehydrogenase 2
ENST00000658304.1	Assembled from SLRseq reads (SRP049776)
ENST00000651788.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000425843.1	heat shock 70kDa protein 8 (HSPA8) pseudogene
ENST00000449760.1	translationally-controlled 1 tumor protein (TPT1) pseudogene
ENST00000457727.1	pseudogene similar to part of ubiquitin-conjugating enzyme E2
ENST00000665977.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000436852.2	ribosomal protein L3 (RPL3) pseudogene
ENST00000616590.4	glutamate receptor ionotrophic AMPA 3
ENST00000620443.2	MANE_select
ENST00000611689.4	alternative 5' UTR
ENST00000611689.4	glutamate receptor ionotrophic AMPA 3
ENST00000479118.1	glutamate receptor ionotrophic AMPA 3
ENST00000477389.1	glutamate receptor ionotrophic AMPA 3
ENST00000460123.1	glutamate receptor ionotrophic AMPA 3
ENST00000416267.1	H3 histone, family 3B (H3.3B) (H3F3B) pseudogene
ENST00000450755.1	tubulin beta 4 (TUBB4) pseudogene
ENST00000448128.5	THO complex 2, variant 3
ENST00000448128.5	non canonical conserved
ENST00000441692.5	THO complex 2, variant 9
ENST00000441692.5	non canonical conserved
ENST00000245838.13	MANE_select
ENST00000245838.13	genebuild_only_MANE
ENST00000497887.5	non canonical conserved
ENST00000432353.5	non canonical conserved
ENST00000455053.5	alternative 3' UTR
ENST00000455053.5	non canonical conserved
ENST00000416618.5	non canonical conserved
ENST00000355725.8	non canonical conserved
ENST00000491737.5	non canonical conserved
ENST00000464982.1	THO complex 2, variant 6
ENST00000438358.1	THO complex 2, variant 8
ENST00000459945.1	THO complex 2, variant 4
ENST00000464161.1	THO complex 2, variant 5
ENST00000436391.1	fer (fps/fes related) tyrosine kinase (phosphoprotein NCP94) (FER) pseudogene
ENST00000468691.5	baculoviral IAP repeat-containing 4, variant 2
ENST00000371199.8	MANE_select
ENST00000458331.1	novel transcript
ENST00000438019.1	par-6 partitioning defective 6 homolog beta (C. elegans) (PARD6B) pseudogene
ENST00000455404.5	alternative 5' UTR
ENST00000455404.5	stromal antigen 2, variant 2
ENST00000371145.8	MANE_select
ENST00000371157.7	stromal antigen 2, variant 1
ENST00000458176.5	stromal antigen 2, variant 5
ENST00000456074.1	zinc finger pseudogene
ENST00000448737.1	heat shock 70kD protein 8 (HSPA8) pseudogene
ENST00000371139.9	MANE_select
ENST00000371139.9	SH2 domain protein 1A, Duncan's disease (lymphoproliferative syndrome)
ENST00000491950.5	SH2 domain protein 1A, Duncan's disease (lymphoproliferative syndrome)
ENST00000494073.5	SH2 domain protein 1A, Duncan's disease (lymphoproliferative syndrome)
ENST00000477673.2	SH2 domain protein 1A, Duncan's disease (lymphoproliferative syndrome)
ENST00000632372.3	MANE_select
ENST00000428821.1	nucleophosmin (nucleolar phosphoprotein B23, numatrin (NPM1)) pseudogene
ENST00000418891.1	testis expressed sequence 13 (TEX13) pseudogene
ENST00000415547.1	ribosomal protein (RPS26) pseudogene
ENST00000422498.1	odz, odd Oz/ten-m homolog 1(Drosophila) (ODZ1) pseudogene
ENST00000394467.3	filamin-binding LIM protein-1 (FBLP-1) pseudogene
ENST00000438994.1	novel transcript
ENST00000360028.4	MANE_select
ENST00000360028.4	novel protein similar to KIAA1892
ENST00000360028.4	probably a pseudogene
ENST00000441633.2	prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) (PTGS1) pseudogene
ENST00000424002.1	pseudogene similar to part of NADH dehydrogenase 4 (MTND4)
ENST00000371126.3	MANE_select
ENST00000371126.3	novel protein
ENST00000417160.1	cytochrome b (MTCYB) pseudogene
ENST00000371125.4	MANE_select
ENST00000371125.4	novel protein
ENST00000422141.1	intracellular membrane-associated calcium-independent phospholipase A2 (IPLA2) pseudogene
ENST00000417272.1	kinesin heavy chain member 2 (KIF2) pseudogene
ENST00000446793.1	Huntingtin interacting protein K (HYPK) pseudogene
ENST00000660383.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000657074.1	Assembled from SLRseq reads (SRP049776)
ENST00000449485.2	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_xor_PolyA_HiSeq
ENST00000449485.2	novel transcript
ENST00000653849.1	Assembled from SLRseq reads (SRP049776)
ENST00000371124.4	actin-related protein T1 (ACTRT1)
ENST00000436514.2	novel pseudogene
ENST00000435859.1	BTG family, member 3 (BTG3) pseudodgene
ENST00000428208.1	actin-related protein pseudogene
ENST00000417266.1	ribosomal protein L7a (RPL7A) pseudogene
ENST00000429864.1	RuvB-like 2 (E. coli) (RUVBL2) pseudogene
ENST00000416086.1	keratin 18 (KRT18) pseudogene
ENST00000415214.2	ribosomal protein L32 (RPL32) pseudogene
ENST00000458202.1	tight junction protein 4 (peripheral) (TJP4) pseudogene
ENST00000444468.1	ribosomal protein S26 (RPS26) pseudogene
ENST00000371122.8	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
ENST00000371121.5	MANE_select
ENST00000478420.1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
ENST00000486673.1	oculocerebrorenal syndrome of Lowe
ENST00000371113.9	MANE_select
ENST00000371113.9	non canonical conserved
ENST00000371113.9	oculocerebrorenal syndrome of Lowe
ENST00000357121.5	non canonical conserved
ENST00000357121.5	oculocerebrorenal syndrome of Lowe
ENST00000647245.1	alternative 3' UTR
ENST00000463271.1	oculocerebrorenal syndrome of Lowe
ENST00000429967.3	MANE_select
ENST00000668487.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000371105.7	X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound
ENST00000371106.4	MANE_select
ENST00000371106.4	X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound
ENST00000356892.4	MANE_select
ENST00000356892.4	chromosome X open reading frame 9
ENST00000476532.1	chromosome X open reading frame 9
ENST00000357166.11	MANE_select
ENST00000357166.11	non-canonical donor splice site at 5th coding exon, and acceptor splice site at 6th coding exon
ENST00000357166.11	zinc finger, DHHC domain containing 9 (CGI-89, ZNF379)
ENST00000371064.7	non-canonical donor splice site at 5th coding exon, and acceptor splice site at 6th coding exon
ENST00000371064.7	zinc finger, DHHC domain containing 9 (CGI-89, ZNF379)
ENST00000433917.5	non-canonical donor splice site at 4th coding exon, and acceptor splice site at 5th coding exon
ENST00000433917.5	zinc finger, DHHC domain containing 9 (CGI-89, ZNF379)
ENST00000406492.2	zinc finger, DHHC domain containing 9 (CGI-89, ZNF379)
ENST00000491039.1	zinc finger, DHHC domain containing 9 (CGI-89, ZNF379)
ENST00000432062.1	putative novel transcript
ENST00000660217.1	Assembled from SLRseq reads (SRP049776)
ENST00000670255.1	Assembled from SLRseq reads (SRP049776)
ENST00000423288.1	sal-like family pseudogene
ENST00000394422.8	MANE_select
ENST00000394422.8	serologically defined colon cancer antigen 16 (NY-CO-16)
ENST00000427972.1	serologically defined colon cancer antigen 16 (NY-CO-16)
ENST00000498179.1	serologically defined colon cancer antigen 16 (NY-CO-16)
ENST00000607874.1	alternative 5' UTR
ENST00000607874.1	novel transcript
ENST00000218147.11	novel protein (FLJ11362)
ENST00000540052.6	CAGE supported TSS
ENST00000540052.6	MANE_select
ENST00000441294.1	novel protein
ENST00000308167.10	E74-like factor 4 (ets domain transcription factor) (MEF, ELFR)
ENST00000308167.10	MANE_select
ENST00000335997.11	E74-like factor 4 (ets domain transcription factor) (MEF, ELFR)
ENST00000434609.1	E74-like factor 4 (ets domain transcription factor) (MEF, ELFR)
ENST00000675050.1	alternative 3' UTR
ENST00000460436.6	NP_001124318.2
ENST00000535724.6	NMD exception
ENST00000535724.6	NP_001124319.1
ENST00000346424.6	confirm experimentally
ENST00000675092.1	confirm experimentally
ENST00000675092.1	non canonical TEC
ENST00000287295.8	MANE_select
ENST00000676328.1	NAGNAG splice site
ENST00000674997.1	alternative 3' UTR
ENST00000319908.8	NAGNAG splice site
ENST00000675774.1	alternative 3' UTR
ENST00000664768.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000257017.5	MANE_select
ENST00000257017.5	RAB33A, member RAS oncogene family (S10, RabS10)
ENST00000370978.9	MANE_select
ENST00000370978.9	novel protein (FLJ20095)
ENST00000447817.1	nove protein
ENST00000420331.2	SNRPN upstream reading frame (SNURF) pseudogene
ENST00000495156.5	solute carrier family 25 (mitochondrial carrier, brain),member 14 (UCP5, BMCP1)
ENST00000464342.5	solute carrier family 25 (mitochondrial carrier, brain),member 14 (UCP5, BMCP1)
ENST00000464184.5	solute carrier family 25 (mitochondrial carrier, brain),member 14 (UCP5, BMCP1)
ENST00000424447.5	alternative 5' UTR
ENST00000424447.5	alternatively spliced 5' UTR, shares CDS with dJ20I3.1.1 (partial)
ENST00000424447.5	solute carrier family 25 (mitochondrial carrier, brain),member 14 (UCP5, BMCP1)
ENST00000545805.6	MANE_select
ENST00000545805.6	genebuild_only_MANE
ENST00000218197.9	solute carrier family 25 (mitochondrial carrier, brain),member 14 (UCP5, BMCP1)
ENST00000467496.5	solute carrier family 25 (mitochondrial carrier, brain),member 14 (UCP5, BMCP1)
ENST00000361980.9	solute carrier family 25 (mitochondrial carrier, brain),member 14 (UCP5, BMCP1)
ENST00000339231.3	solute carrier family 25 (mitochondrial carrier, brain),member 14 (UCP5, BMCP1)
ENST00000478474.5	solute carrier family 25 (mitochondrial carrier, brain),member 14 (UCP5, BMCP1)
ENST00000467346.1	solute carrier family 25 (mitochondrial carrier, brain),member 14 (UCP5, BMCP1)
ENST00000471795.1	solute carrier family 25 (mitochondrial carrier, brain),member 14 (UCP5, BMCP1)
ENST00000465988.1	solute carrier family 25 (mitochondrial carrier, brain),member 14 (UCP5, BMCP1)
ENST00000276218.4	CAGE supported TSS
ENST00000276218.4	G-protein coupled receptor 2 (GPCR2)
ENST00000305536.11	CGI-79 protein
ENST00000305536.11	MANE_select
ENST00000469953.1	novel transcript
ENST00000370947.1	CGI-79 protein
ENST00000487274.1	novel transcript
ENST00000458525.1	novel transcript
ENST00000654625.1	Assembled from SLRseq reads (SRP049776)
ENST00000370935.5	cytosolic ovarian carcinoma antigen 1
ENST00000370927.5	cytosolic ovarian carcinoma antigen 1
ENST00000338144.7	align_id:3772300|asmbl_262465
ENST00000432489.5	cytosolic ovarian carcinoma antigen 1
ENST00000492263.1	cytosolic ovarian carcinoma antigen 1
ENST00000440178.1	novel pseudogene
ENST00000451431.1	putative novel transcript
ENST00000412420.1	putative novel transcript
ENST00000276211.10	MANE_select
ENST00000412432.6	GenBank: AAH63790.1
ENST00000451582.2	unitary_pseudogene
ENST00000370910.5	CCDS55490.1
ENST00000370910.5	immunoglobulin superfamily member 1
ENST00000361420.8	CAGE supported TSS
ENST00000361420.8	LR annotation
ENST00000361420.8	MANE_select
ENST00000370903.8	CAGE supported TSS
ENST00000370903.8	LR annotation
ENST00000370904.6	CCDS55490.1
ENST00000370904.6	immunoglobulin superfamily member 1
ENST00000651556.1	alternative 5' UTR
ENST00000467244.1	immunoglobulin superfamily member 1
ENST00000469836.1	immunoglobulin superfamily member 1
ENST00000370900.5	CCDS14630.1
ENST00000370900.5	immunoglobulin superfamily member 1
ENST00000370901.4	CCDS14630.1
ENST00000370901.4	immunoglobulin superfamily member 1
ENST00000415818.2	olfactory receptor family pseudogene
ENST00000415818.2	unitary_pseudogene
ENST00000668852.1	Assembled from SLRseq reads (SRP049776)
ENST00000454101.2	olfactory receptor family pseudogene
ENST00000454101.2	unitary_pseudogene
ENST00000419597.2	unitary_pseudogene
ENST00000441066.1	pseudogene similar to part of seven transmembrane helix receptor
ENST00000422384.2	pseudogene similar to part of PYRIN-containing Apaf1-like protein 3 (PYPAF3)
ENST00000651362.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000662867.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663405.1	Assembled from SLRseq reads (SRP049776)
ENST00000665076.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000654978.1	Assembled from SLRseq reads (SRP049776)
ENST00000648028.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000656586.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000668308.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658376.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653136.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657242.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658060.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000394346.2	novel pseudogene
ENST00000435914.1	myofibrillogenesis regulator 1 (MR-1) (FKSG19) pseudogene
ENST00000438615.1	pseudogene similar to part of SMT3 suppressor of mif two 3 (yeast)
ENST00000481105.5	Genbank: BAG64601
ENST00000354719.10	Genbank: BAC11435
ENST00000394334.7	MANE_select
ENST00000394335.6	Genbank: BAC11406
ENST00000496850.1	NP_001035917.1
ENST00000298542.9	MANE_select
ENST00000370879.5	novel protein (LOC90167)
ENST00000464296.1	Genbank:ACN56448
ENST00000424708.1	novel pseudogene
ENST00000342983.6	RAP2C (member of RAS oncogene family)
ENST00000370874.2	MANE_select
ENST00000370874.2	RAP2C (member of RAS oncogene family)
ENST00000370874.2	alternative 5' UTR
ENST00000370874.2	alternatively splced 5' UTR, shares CDS with .1.1
ENST00000460462.1	RAP2C (member of RAS oncogene family)
ENST00000490400.1	RAP2C (member of RAS oncogene family)
ENST00000656464.1	Assembled from RACEseq reads
ENST00000441399.3	Assembled from SLRseq reads (SRP049776)
ENST00000441399.3	putative novel transcript
ENST00000669125.1	Assembled from RACEseq reads
ENST00000370857.7	muscleblind-like 3 (Drosophila)
ENST00000370853.7	muscleblind-like 3 (Drosophila)
ENST00000370849.7	muscleblind-like 3 (Drosophila)
ENST00000370839.7	muscleblind-like 3 (Drosophila)
ENST00000370844.5	muscleblind-like 3 (Drosophila)
ENST00000442191.5	muscleblind-like 3 (Drosophila)
ENST00000465964.1	muscleblind-like 3 (Drosophila)
ENST00000436215.5	muscleblind-like 3 (Drosophila)
ENST00000421707.1	muscleblind-like 3 (Drosophila)
ENST00000473364.1	muscleblind-like 3 (Drosophila)
ENST00000521489.5	NP_001070656
ENST00000455269.1	putative novel transcript
ENST00000428456.1	N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae) (NAT5) pseudogene
ENST00000511190.5	alternative 5' UTR
ENST00000444622.1	DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 (DDX53) pseudogene
ENST00000310125.5	MANE_select
ENST00000310125.5	novel E2F-like protein (LOC51270)
ENST00000370828.4	MANE_select
ENST00000370828.4	glypican 4
ENST00000394299.7	LR annotation
ENST00000370818.8	MANE_select
ENST00000370818.8	glypican 3
ENST00000406757.2	glypican 3
ENST00000426577.1	ribosomal protein S24 (RPS24) pseudogene
ENST00000412013.1	laminin receptor 1 (ribosomal protein SA, 67kDa) pseudogene
ENST00000455649.1	novel pseudogene
ENST00000445940.1	translocase of inner mitochondrial membrane 8 homolog B (yeast) (TIMM8B) pseudogene
ENST00000437229.2	novel pseudogene
ENST00000399325.2	novel pseudogene
ENST00000332070.7	PHD finger protein 6
ENST00000370803.8	MANE_select
ENST00000370803.8	PHD finger protein 6
ENST00000370799.5	PHD finger protein 6
ENST00000370800.4	PHD finger protein 6
ENST00000298556.8	MANE_select
ENST00000298556.8	hypoxanthine phosphoribosyltransferase 1 (Lesch-Nyhan syndrome)
ENST00000462974.5	hypoxanthine phosphoribosyltransferase 1 (Lesch-Nyhan syndrome)
ENST00000475720.1	hypoxanthine phosphoribosyltransferase 1 (Lesch-Nyhan syndrome)
ENST00000438135.1	ribosomal protein L36a (RPL36A) pseudogene
ENST00000414769.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000440570.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670930.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000666697.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000655068.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000659680.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671259.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671259.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000654989.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657735.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000671142.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000434384.5	putative novel transcript
ENST00000592070.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000652893.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000659711.1	Assembled from SLRseq reads (SRP049776)
ENST00000359237.9	MANE_select
ENST00000359237.9	placenta-specific 1
ENST00000476971.5	placenta-specific 1
ENST00000473897.1	placenta-specific 1
ENST00000466797.1	placenta-specific 1
ENST00000440614.1	novel transcript
ENST00000443666.2	ribosomal protein L21 (RPL21) pseudogene
ENST00000422385.2	ribosomal protein S7 (RPS7) pseudogene
ENST00000478384.5	novel transcript
ENST00000465128.3	novel transcript
ENST00000645288.1	alternative 5' UTR
ENST00000647516.1	alternative 5' UTR
ENST00000370785.4	novel protein (LOC159091)
ENST00000482240.5	alternative 5' UTR
ENST00000482240.5	novel transcript
ENST00000475361.1	novel transcript
ENST00000494709.1	novel transcript
ENST00000470657.5	novel transcript
ENST00000460216.5	novel transcript
ENST00000370783.8	MANE_select
ENST00000370783.8	novel protein
ENST00000491609.5	novel transcript
ENST00000370779.8	novel transcript
ENST00000480721.5	novel transcript
ENST00000370777.1	novel transcript
ENST00000489890.1	novel transcript
ENST00000462060.1	novel transcript
ENST00000441841.1	novel transcript
ENST00000413333.1	high-mobility group protein pseudogene
ENST00000330288.6	CAGE supported TSS
ENST00000330288.6	MANE_select
ENST00000391440.3	MANE_select
ENST00000257013.9	MANE_select
ENST00000662693.1	Assembled from RACEseq reads
ENST00000370775.3	MANE_select
ENST00000663806.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000453528.1	novel transcript
ENST00000416078.1	nucleolin (NCL) pseudogene
ENST00000433425.4	MANE_select
ENST00000433425.4	NMD exception
ENST00000426364.5	novel transcript
ENST00000423661.1	MANE_select
ENST00000416873.1	putative novel transcript
ENST00000454984.1	zinc finger family pseudogene
ENST00000276241.11	MANE_select
ENST00000276241.11	novel protein
ENST00000344129.2	novel protein (FLJ20527)
ENST00000441416.1	novel pseudogene
ENST00000445718.1	novel pseudogene
ENST00000494295.1	zinc finger protein 75 (D8C6)
ENST00000370766.8	MANE_select
ENST00000370766.8	zinc finger protein 75 (D8C6)
ENST00000370764.1	zinc finger protein 75 (D8C6)
ENST00000469456.1	zinc finger protein 75 (D8C6)
ENST00000427686.3	MANE_select
ENST00000454551.1	novel transcript
ENST00000635820.1	MANE_select
ENST00000635820.1	not best-in-genome evidence
ENST00000370761.7	novel protein (FLJ23614)
ENST00000339249.5	MANE_select
ENST00000339249.5	novel protein (DKFZp313N1820)
ENST00000439434.1	novel transcript
ENST00000417443.3	MANE_select
ENST00000417443.3	NMD exception
ENST00000426910.1	novel pseudogene
ENST00000430820.1	putative novel transcript
ENST00000370752.4	novel protein (LOC203522)
ENST00000481908.5	novel protein
ENST00000481908.5	novel transcript, variant 2 (FLJ39225)
ENST00000639893.2	MANE_select
ENST00000493637.6	novel transcript
ENST00000494957.5	novel transcript
ENST00000481429.1	novel transcript
ENST00000439300.1	v-ets erythroblastosis virus E26 oncogene homolog 2 (avian) (ETS2) pseudogene
ENST00000442271.1	sarcoma antigen (SAGE) pseudogene
ENST00000420011.1	sarcoma antigen (SAGE) pseudogene
ENST00000370741.3	alternatively spliced 5' UTR, shared CDS with .1.1
ENST00000370741.3	novel protein (LOC257122)
ENST00000497301.2	novel protein (LOC257122)
ENST00000482795.1	alternative 5' UTR
ENST00000482795.1	novel transcript
ENST00000611660.5	MANE_select
ENST00000471213.2	alternative 5' UTR
ENST00000495729.2	alternative 5' UTR
ENST00000485366.2	alternative 5' UTR
ENST00000449718.1	pseudogene similar to part of mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT2)
ENST00000427194.1	pseudogene similar to part of mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT2)
ENST00000487941.2	alternative 5' UTR
ENST00000494421.1	alternative 5' UTR
ENST00000491002.2	alternative 5' UTR
ENST00000472834.1	alternative 5' UTR
ENST00000620704.5	MANE_select
ENST00000370709.3	sarcoma antigen (SAGE)
ENST00000448043.1	novel pseudogene
ENST00000305963.3	CAGE supported TSS
ENST00000305963.3	MANE_select
ENST00000679621.1	alternative 5' UTR
ENST00000636347.1	alternative 5' UTR
ENST00000636092.1	alternative 5' UTR
ENST00000637581.1	alternative 5' UTR
ENST00000370701.6	non canonical U12
ENST00000370701.6	solute carrier family 9 (sodium/hydrogen exchanger), isoform 6
ENST00000370698.7	non canonical U12
ENST00000370698.7	solute carrier family 9 (sodium/hydrogen exchanger), isoform 6
ENST00000627534.2	alternative 5' UTR
ENST00000370695.8	non canonical U12
ENST00000370695.8	solute carrier family 9 (sodium/hydrogen exchanger), isoform 6
ENST00000630721.3	MANE_select
ENST00000630721.3	non canonical U12
ENST00000643775.1	non canonical U12
ENST00000422905.2	glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene (LOC139543)
ENST00000468625.1	E2F transcription factor 6 (E2F6) pseudogene (LOC139542)
ENST00000651929.2	LR annotation
ENST00000652745.1	alternative 5' UTR
ENST00000394155.8	LR annotation
ENST00000394155.8	four and a half LIM domains 1
ENST00000651089.1	alternative 5' UTR
ENST00000420362.5	alternative 5' UTR
ENST00000420362.5	alternatively spliced in 5' UTR, shares partial CDS with bA535K18.1.1
ENST00000420362.5	four and a half LIM domains 1
ENST00000458357.5	alternative 5' UTR
ENST00000458357.5	alternatively spliced in 5' UTR, shares partial CDS with bA535K18.1.1
ENST00000458357.5	four and a half LIM domains 1
ENST00000452016.5	alternative 5' UTR
ENST00000452016.5	alternatively spliced in 5' UTR, shares partial CDS with bA535K18.1.1
ENST00000452016.5	four and a half LIM domains 1
ENST00000628919.3	alternative 5' UTR
ENST00000651256.1	alternative 5' UTR
ENST00000434885.5	alternative 5' UTR
ENST00000434885.5	alternatively spliced in 5' UTR, shares partial CDS with bA535K18.1.1
ENST00000434885.5	four and a half LIM domains 1
ENST00000456445.5	alternative 5' UTR
ENST00000456445.5	alternatively spliced in 5' UTR, shares partial CDS with bA535K18.1.1
ENST00000456445.5	four and a half LIM domains 1
ENST00000449474.5	alternative 5' UTR
ENST00000449474.5	alternatively spliced in 5' UTR, shares partial CDS with bA535K18.1.1
ENST00000449474.5	four and a half LIM domains 1
ENST00000370676.7	four and a half LIM domains 1
ENST00000370683.6	LR annotation
ENST00000370683.6	MANE_select
ENST00000370683.6	four and a half LIM domains 1
ENST00000477204.5	four and a half LIM domains 1
ENST00000370674.3	alternative 5' UTR
ENST00000370674.3	alternatively spliced in 5' UTR, shares partial CDS with bA535K18.1.1
ENST00000370674.3	four and a half LIM domains 1
ENST00000477080.1	four and a half LIM domains 1
ENST00000370661.5	DKFZp686B2110
ENST00000471510.1	novel transcript
ENST00000316077.14	MANE_select
ENST00000495432.1	novel transcript
ENST00000455035.1	serine/threonine kinase 24 (STE20 homolog, yeast) (STK24) pseudogene
ENST00000394143.6	MANE_select
ENST00000370648.4	MANE_select
ENST00000370648.4	bombesin-like receptor 3
ENST00000448450.5	HIV TAT specific factor 1 (TAT-SF1)
ENST00000448450.5	alternative 5' UTR
ENST00000448450.5	alternatively spliced in 5' UTR, shares partial CDS with dJ196E23.2.1
ENST00000425695.5	HIV TAT specific factor 1 (TAT-SF1)
ENST00000425695.5	alternative 5' UTR
ENST00000425695.5	alternatively spliced in 5' UTR, shares partial CDS with dJ196E23.2.1
ENST00000218364.5	HIV TAT specific factor 1 (TAT-SF1)
ENST00000218364.5	MANE_select
ENST00000370634.8	MANE_select
ENST00000370634.8	vestgial like 1 (Drosophila) (TDU, VGL1, TONDU)
ENST00000440515.5	vestgial like 1 (Drosophila) (TDU, VGL1, TONDU)
ENST00000456412.1	vestgial like 1 (Drosophila) (TDU, VGL1, TONDU)
ENST00000470358.1	vestgial like 1 (Drosophila) (TDU, VGL1, TONDU)
ENST00000454385.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000656219.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000370629.7	MANE_select
ENST00000370629.7	tumor necrosis factor (ligand) superfamily, member 5 (hyper-IgM syndrome)
ENST00000370628.2	tumor necrosis factor (ligand) superfamily, member 5 (hyper-IgM syndrome)
ENST00000370620.5	Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
ENST00000370622.5	Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
ENST00000250617.7	MANE_select
ENST00000250617.7	Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
ENST00000429441.1	ribosomal protein L7 (RPL7) pseudogene
ENST00000413361.2	RAN, member RAS oncogene family pseudogene
ENST00000435597.1	novel transcript
ENST00000427490.1	RAB28, member RAS oncogene family pseudogene
ENST00000320676.11	MANE_select
ENST00000650669.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000426911.2	serine/arginine repetitive matrix 1 (SRRM1) pseudogene (LOC347480)
ENST00000651716.2	CAGE supported TSS
ENST00000651716.2	MANE_select
ENST00000442158.1	ribosomal protein L28 (RPL28) pseudogene
ENST00000419413.1	ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) (RAC1) pseudogene (LOC286472)
ENST00000456631.1	novel transcript
ENST00000442841.1	novel transcript
ENST00000287538.10	MANE_select
ENST00000287538.10	Zic family member 3 heterotaxy (odd-paired homolog, Drosophila)
ENST00000370606.3	Zic family member 3 heterotaxy (odd-paired homolog, Drosophila)
ENST00000478471.1	Zic family member 3 heterotaxy (odd-paired homolog, Drosophila)
ENST00000668975.1	Assembled from SLRseq reads (SRP049776)
ENST00000416133.1	pseudogene similar to part of MAD, mothers against decapentaplegic homolog (Drosophila) interacting protein, receptor activation anchor (MADHIP)
ENST00000418272.1	melanoma antigen, family A, 11 (MAGEA11) pseudogene
ENST00000399259.2	tau tubulin kinase pseudogene
ENST00000315930.11	MANE_select
ENST00000448673.1	fibroblast growth factor 13
ENST00000421460.1	fibroblast growth factor 13
ENST00000411940.1	novel transcript
ENST00000446383.5	novel transcript
ENST00000438238.1	novel transcript
ENST00000433780.1	tropomyosin 2 (beta) (TPM2) pseudogene
ENST00000442297.1	steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) (SRD5A1) pseudogene
ENST00000218099.7	F9: coagulation factor IX (plasma thromboplastic component, Christmas disease, hemophilia B) (FIX, PTC, HEMB)
ENST00000218099.7	MANE_select
ENST00000479617.2	F9: coagulation factor IX (plasma thromboplastic component, Christmas disease, hemophilia B) (FIX, PTC, HEMB)
ENST00000479617.2	non canonical TEC
ENST00000370576.9	MCF.2 cell line derived transforming sequence (DBL)
ENST00000520602.6	NP_001093325
ENST00000437564.5	MCF.2 cell line derived transforming sequence (DBL)
ENST00000446225.5	MCF.2 cell line derived transforming sequence (DBL)
ENST00000519895.5	NP_001165347
ENST00000370573.8	MCF.2 cell line derived transforming sequence (DBL)
ENST00000338585.6	MCF.2 cell line derived transforming sequence (DBL)
ENST00000483690.1	MCF.2 cell line derived transforming sequence (DBL)
ENST00000370557.5	ATPase, Class VI, type 11C (ATPIG, ATPIQ)
ENST00000433868.5	ATPase, Class VI, type 11C (ATPIG, ATPIQ)
ENST00000450801.1	ATPase, Class VI, type 11C (ATPIG, ATPIQ)
ENST00000471746.1	ATPase, Class VI, type 11C (ATPIG, ATPIQ)
ENST00000422228.1	ATPase, Class VI, type 11C (ATPIG, ATPIQ)
ENST00000485626.1	ATPase, Class VI, type 11C (ATPIG, ATPIQ)
ENST00000370540.2	MANE_select
ENST00000370540.2	novel protein
ENST00000417426.1	putative novel transcript
ENST00000416838.1	heterogeneous nuclear ribonucleoprotein A3 (HNRPA3) pseudogene
ENST00000458577.1	putative novel transcript
ENST00000420490.1	embryonic ectoderm development (EED) pseudogene
ENST00000419392.1	ribosomal protein S17 (RPS17) pseudogene
ENST00000370536.5	MANE_select
ENST00000455153.1	novel transcript
ENST00000668884.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000607004.7	Assembled from SLRseq reads (SRP049776)
ENST00000649192.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649192.2	Assembled from SLRseq reads (SRP049776)
ENST00000649192.2	novel protein (FLJ30416)(LOC286411)
ENST00000660897.1	Assembled from SLRseq reads (SRP049776)
ENST00000648200.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000649335.2	Assembled from SLRseq reads (SRP049776)
ENST00000659304.1	Assembled from SLRseq reads (SRP049776)
ENST00000498732.7	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650158.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000658451.1	Assembled from SLRseq reads (SRP049776)
ENST00000669839.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000650391.2	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000413328.1	putative novel transcript
ENST00000449283.2	MANE_select
ENST00000449283.2	SPANX family member B2
ENST00000370526.5	MANE_select
ENST00000370526.5	leucine zipper down-regulated in cancer 1
ENST00000460721.1	leucine zipper down-regulated in cancer 1
ENST00000399253.3	ribosomal protein L36a (RPL36A) pseudogene
ENST00000665569.1	Assembled from SLRseq reads (SRP049776)
ENST00000666172.1	Assembled from SLRseq reads (SRP049776)
ENST00000664367.1	Assembled from SLRseq reads (SRP049776)
ENST00000622372.1	FLJ36186
ENST00000358993.3	MANE_select
ENST00000257020.7	CGI-79 protein (CGI-79) pseudogene
ENST00000425910.1	NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3 12kDa pseudogene
ENST00000370519.3	NP_038481.2
ENST00000370518.4	MANE_select
ENST00000370518.4	NP_663695.1
ENST00000412163.1	putative novel transcript
ENST00000370515.3	MANE_select
ENST00000370515.3	SPANX family, member D
ENST00000298296.1	MAGE family testis and tumor-specific protein-like
ENST00000298296.1	MANE_select
ENST00000483584.5	MAGE family testis and tumor-specific protein-like
ENST00000285879.5	MANE_select
ENST00000285879.5	melanoma antigen, family C, 1
ENST00000664519.1	CAGE supported TSS
ENST00000412173.1	MAGE (Melanoma Associated Antigen) family pseudogene
ENST00000423985.1	MAGE (Melanoma Associated Antigen) family pseudogene
ENST00000503029.1	melanoma antigen, family E, 1, cancer/testis specific (MAGEE1) pseudogene
ENST00000247452.4	MANE_select
ENST00000247452.4	melanoma antigen, family E, 1, cancer/testis specific
ENST00000446864.1	NP_001009613
ENST00000370504.3	LOC441525
ENST00000431432.1	novel transcript
ENST00000421501.1	piggyBac transposable element derived 4 (PGBD4) pseudogene
ENST00000446251.1	NADH dehydrogenase 1 (MTND1) pseudogene
ENST00000457230.1	NADH dehydrogenase 2 (MTND2) pseudogene
ENST00000370503.2	LOC139067
ENST00000370503.2	MANE_select
ENST00000453484.1	novel pseudogene
ENST00000356928.2	MANE_select
ENST00000356928.2	novel protein (DKFZp547M2010)
ENST00000338017.8	alternative 5' UTR
ENST00000396845.3	heterogeneous nuclear ribonucleoprotein H pseudogene
ENST00000423667.1	putative novel transcript
ENST00000448562.1	pseudogene similar to part of ribosomal protein S7 (RPS7)
ENST00000436312.2	pseudogene similar to part of ribonucleotide reductase M2 polypeptide (RRM2)
ENST00000441721.1	pseudogene similar to part of ribonucleotide reductase M2 polypeptide (RRM2)
ENST00000457130.2	heterogeneous nuclear ribonucleoprotein C (C1/C2) (HNRPC) pseudogene
ENST00000448560.1	cytochrome c (CYCS) pseudogene
ENST00000414071.1	putative novel transcript
ENST00000370493.4	MANE_select
ENST00000443260.1	novel pseudogene
ENST00000650977.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000335565.6	MANE_select
ENST00000370490.1	alternative 5' UTR
ENST00000421173.1	ADP-ribosylation factor-like 5 (ARL5) pseudogene
ENST00000446870.1	ELL gene (11-19 lysine-rich leukemia gene) (ELL) pseudogene
ENST00000445173.1	novel pseudogene
ENST00000438525.3	MANE_select
ENST00000458472.1	putative novel transcript
ENST00000421282.1	pseudogene similar to part of a putative dimethyladenosine transferase (HSA9761)
ENST00000658633.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000450437.1	SMT3 suppressor of mif two 3 homolog 1 (yeast) (SMT3H1) pseudogene
ENST00000458303.1	novel pseudogene
ENST00000654189.1	Assembled from RACEseq reads
ENST00000456072.1	putative novel transcript
ENST00000370475.9	MANE_select
ENST00000370475.9	fragile X mental retardation 1
ENST00000370477.5	fragile X mental retardation 1
ENST00000334557.10	fragile X mental retardation 1
ENST00000439526.6	fragile X mental retardation 1
ENST00000495717.5	fragile X mental retardation 1
ENST00000370470.5	fragile X mental retardation 1
ENST00000492846.1	fragile X mental retardation 1
ENST00000463120.2	fragile X mental retardation 1
ENST00000478848.1	fragile X mental retardation 1
ENST00000370467.8	MANE_select
ENST00000370467.8	novel protein (FLJ25736)
ENST00000489034.2	novel protein
ENST00000498161.1	ferritin heavy polypeptide 1 (FTH1) pseudogene
ENST00000411473.1	HS1 binding protein (HAX1) pseudogene
ENST00000446092.2	ribosomal protein L7 (RPL7) pseudogene
ENST00000456981.1	novel transcript
ENST00000370460.7	LR annotation
ENST00000370460.7	MANE_select
ENST00000435346.1	novel transcript
ENST00000498002.1	pseudogene similar to part of taxol resistance associated gene 3 (TRAG3)
ENST00000340855.11	MANE_select
ENST00000466323.5	iduronate 2-sulfatase (Hunter syndrome) (MPS2, SIDS)
ENST00000490775.5	iduronate 2-sulfatase (Hunter syndrome) (MPS2, SIDS)
ENST00000466019.1	iduronate 2-sulfatase (Hunter syndrome) (MPS2, SIDS)
ENST00000428056.6	iduronate 2-sulfatase (Hunter syndrome) (MPS2, SIDS)
ENST00000521702.1	alternative 5' UTR
ENST00000651111.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000422081.6	novel transcript
ENST00000441880.1	novel transcript
ENST00000370438.2	novel transcript
ENST00000324799.4	iduronate 2-sulfatase pseudogene 1
ENST00000412882.5	novel transcript
ENST00000431025.1	novel transcript
ENST00000430173.1	novel transcript
ENST00000451969.1	novel transcript
ENST00000447209.5	novel transcript
ENST00000608616.5	novel transcript
ENST00000431214.5	novel transcript
ENST00000431132.6	alternative 5' UTR
ENST00000450602.6	alternative 5' UTR
ENST00000423421.5	alternative 5' UTR
ENST00000423540.6	alternative 5' UTR
ENST00000393985.8	MANE_select
ENST00000393985.8	alternative 5' UTR
ENST00000514208.5	alternative 5' UTR
ENST00000422892.2	alternative 5' UTR
ENST00000359293.5	alternative 5' UTR
ENST00000431993.4	LOC101928917
ENST00000431993.4	MANE_select
ENST00000595065.5	NP_005356
ENST00000593349.5	alternative 5' UTR
ENST00000602102.5	alternative 5' UTR
ENST00000594744.1	alternative 5' UTR
ENST00000612022.1	novel transcript
ENST00000600449.8	MANE_select
ENST00000502858.3	novel transcript
ENST00000507237.5	novel transcript
ENST00000502900.2	novel transcript
ENST00000511776.1	novel transcript
ENST00000355220.6	MANE_select
ENST00000370416.4	MANE_select
ENST00000439010.2	alternative 5' UTR
ENST00000298974.5	NP_005356
ENST00000522429.1	alternative 5' UTR
ENST00000519822.1	alternative 5' UTR
ENST00000523516.1	alternative 5' UTR
ENST00000436482.1	melanoma antigen pseudogene
ENST00000424782.1	dUTP pyrophosphatase (DUT) pseudogene
ENST00000427671.1	putative novel transcript
ENST00000286482.6	MANE_select
ENST00000286482.6	melanoma antigen, family A, 8
ENST00000345830.3	melanoma antigen, family A, 8
ENST00000493910.1	melanoma antigen, family A, 8
ENST00000370406.8	MANE_select
ENST00000355203.6	alternative 5' UTR
ENST00000370404.5	alternative 5' UTR
ENST00000370409.7	alternative 5' UTR
ENST00000483447.1	alternative 5' UTR
ENST00000457775.3	LOC101927685
ENST00000457775.3	MANE_select
ENST00000670799.1	Assembled from SLRseq reads (SRP049776)
ENST00000425602.2	Assembled from SLRseq reads (SRP049776)
ENST00000654890.1	Assembled from SLRseq reads (SRP049776)
ENST00000654890.1	novel transcript
ENST00000449111.5	novel transcript
ENST00000444489.5	novel transcript
ENST00000669126.1	Assembled from SLRseq reads (SRP049776)
ENST00000452864.2	Assembled from SLRseq reads (SRP049776)
ENST00000671125.1	Assembled from SLRseq reads (SRP049776)
ENST00000455777.1	novel transcript
ENST00000413076.2	Assembled from SLRseq reads (SRP049776)
ENST00000332359.5	novel pseudogene
ENST00000457831.1	thyroid autoantigen 70kDa (Ku antigen) (G22P1) pseudogene
ENST00000432680.7	MANE_select
ENST00000358892.7	alternative 5' UTR
ENST00000370396.7	MANE_select
ENST00000370396.7	myotubular myopathy 1
ENST00000424519.1	myotubular myopathy 1
ENST00000370393.5	myotubular myopathy 1
ENST00000306167.11	myotubular myopathy 1
ENST00000490530.1	myotubular myopathy 1
ENST00000493995.6	alternative 5' UTR
ENST00000429965.6	alternative 5' UTR
ENST00000434699.6	alternative 5' UTR
ENST00000445323.7	MANE_select
ENST00000488357.1	myotubularin related protein 1
ENST00000370377.8	MANE_select
ENST00000346693.8	CD99 antigen-like 2
ENST00000418547.2	CD99 antigen-like 2
ENST00000491877.1	CD99 antigen-like 2
ENST00000430535.1	peptidylprolyl isomerase A (cyclophilin A)(PPIA) pseudogene
ENST00000437772.5	novel transcript
ENST00000424539.1	novel transcript
ENST00000419110.5	alternative 5' UTR
ENST00000419110.5	alternatively spliced  5' UTR; shares CDS with Em:AF003626.2.1, Em:AF003626.2.3 and Em:AF003626.2.4
ENST00000419110.5	high-mobility group box 3
ENST00000325307.12	MANE_select
ENST00000325307.12	alternative 5' UTR
ENST00000325307.12	alternatively spliced  5' UTR; shares CDS with Em:AF003626.2.2, Em:AF003626.2.3 and Em:AF003626.2.4
ENST00000325307.12	high-mobility group box 3
ENST00000455596.5	alternative 5' UTR
ENST00000455596.5	alternatively spliced  5' UTR; shares CDS with Em:AF003626.2.1, Em:AF003626.2.2 and Em:AF003626.2.4
ENST00000455596.5	high-mobility group box 3
ENST00000430118.1	alternative 5' UTR
ENST00000430118.1	alternatively spliced  5' UTR; shares CDS with Em:AF003626.2.1, Em:AF003626.2.2 and Em:AF003626.2.3
ENST00000430118.1	high-mobility group box 3
ENST00000454196.1	novel transcript
ENST00000218316.4	G protein-coupled receptor 50
ENST00000218316.4	MANE_select
ENST00000458074.1	NGFI-A binding protein 1 (EGR1 binding protein 1) (NAB1) pseudogene
ENST00000668689.1	Assembled from SLRseq reads (SRP049776)
ENST00000664935.1	Assembled from SLRseq reads (SRP049776)
ENST00000664896.1	Assembled from SLRseq reads (SRP049776)
ENST00000660681.1	Assembled from SLRseq reads (SRP049776)
ENST00000477649.1	novel transcript
ENST00000370361.5	novel protein (FLJ39516)(LOC203547)
ENST00000330374.7	CAGE supported TSS
ENST00000330374.7	MANE_select
ENST00000330374.7	novel protein (FLJ39516)(LOC203547)
ENST00000370357.5	MANE_select
ENST00000652529.1	alternative 5' UTR
ENST00000448726.5	alternative 5' UTR
ENST00000674457.1	CAGE supported TSS
ENST00000674457.1	MANE_select
ENST00000370354.5	transmembrane gamma-carboxyglutamic acid protein 3 (TMG3)
ENST00000370353.3	transmembrane gamma-carboxyglutamic acid protein 3 (TMG3)
ENST00000448324.1	transmembrane gamma-carboxyglutamic acid protein 3 (TMG3)
ENST00000370350.7	MANE_select
ENST00000370350.7	fetal and adult testis expressed (FATE)
ENST00000417321.1	fetal and adult testis expressed (FATE)
ENST00000329903.4	cyclic nucleotide gated channel alpha 2
ENST00000411474.1	putative novel transcript
ENST00000445330.1	putative novel transcript
ENST00000424126.1	putative novel transcript
ENST00000431963.5	melanoma antigen, family A, 4
ENST00000448295.5	melanoma antigen, family A, 4
ENST00000430273.5	melanoma antigen, family A, 4
ENST00000441865.5	melanoma antigen, family A, 4
ENST00000370340.7	melanoma antigen, family A, 4
ENST00000425182.5	melanoma antigen, family A, 4
ENST00000416020.1	melanoma antigen, family A, 4
ENST00000457310.5	melanoma antigen, family A, 4
ENST00000370335.5	melanoma antigen, family A, 4
ENST00000360243.6	melanoma antigen, family A, 4
ENST00000431971.1	melanoma antigen, family A, 4
ENST00000370328.4	MANE_select
ENST00000370328.4	gamma-aminobutyric acid (GABA) A receptor, epsilon
ENST00000483564.5	gamma-aminobutyric acid (GABA) A receptor, epsilon
ENST00000486255.1	gamma-aminobutyric acid (GABA) A receptor, epsilon
ENST00000462018.1	gamma-aminobutyric acid (GABA) A receptor, epsilon
ENST00000441219.5	gamma-aminobutyric acid (GABA) A receptor, epsilon
ENST00000474932.1	gamma-aminobutyric acid (GABA) A receptor, epsilon
ENST00000465405.1	gamma-aminobutyric acid (GABA) A receptor, epsilon
ENST00000415403.1	laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1) pseudogene
ENST00000446757.1	melanoma antigen, family A pseudogene
ENST00000577437.1	NMD likely if extended
ENST00000370323.9	MANE_select
ENST00000370323.9	alternative 5' UTR
ENST00000444834.6	melanoma antigen, family A, 10
ENST00000427322.6	alternative 5' UTR
ENST00000583480.5	alternative 5' UTR
ENST00000579960.1	alternative 5' UTR
ENST00000453915.1	putative novel transcript
ENST00000370314.9	MANE_select
ENST00000370314.9	gamma-aminobutyric acid (GABA) A receptor, alpha 3
ENST00000535043.1	alternative 5' UTR
ENST00000497894.1	gamma-aminobutyric acid (GABA) A receptor, alpha 3
ENST00000417858.1	gamma-aminobutyric acid (GABA) A receptor, alpha 3
ENST00000434750.1	keratin 8 (KT8) pseudogene
ENST00000671457.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000598523.3	MANE_select
ENST00000412733.1	alternative 5' UTR
ENST00000457643.1	alternative 5' UTR
ENST00000423993.5	alternative 5' UTR
ENST00000447530.5	alternative 5' UTR
ENST00000458057.5	alternative 5' UTR
ENST00000422085.5	alternative 5' UTR
ENST00000453150.5	alternative 5' UTR
ENST00000409560.1	alternative 5' UTR
ENST00000437309.1	putative novel transcript
ENST00000393869.8	MANE_select
ENST00000393869.8	genebuild_only_MANE
ENST00000357916.8	melanoma antigen, family A, 12
ENST00000393900.4	alternative 5' UTR
ENST00000452779.3	MANE_select
ENST00000452779.3	alternative 5' UTR
ENST00000595583.5	alternative 5' UTR
ENST00000617846.4	alternative 5' UTR
ENST00000617505.1	alternative 5' UTR
ENST00000370278.3	alternative 5' UTR
ENST00000370278.3	alternative 5' UTR; shares CDS with Em:AF002997.12.2
ENST00000370278.3	melanoma antigen, family A, 3
ENST00000417212.1	alternative 5' UTR
ENST00000417212.1	alternative 5' UTR; shares CDS with Em:AF002997.12.1
ENST00000417212.1	melanoma antigen, family A, 3
ENST00000651163.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000431382.1	pseudogene similar to melanoma antigen family protein
ENST00000370277.5	MANE_select
ENST00000370277.5	centrin, EF-hand protein, 2
ENST00000493482.1	centrin, EF-hand protein, 2
ENST00000432467.1	NAD(P)-dependent steroid dehydrogenase-like (H105E3)
ENST00000370274.8	MANE_select
ENST00000370274.8	NAD(P)-dependent steroid dehydrogenase-like (H105E3)
ENST00000370268.8	NP_009081
ENST00000426821.6	Zinc finger protein 185 (LIM-domain protein ZNF185) (P1-A)
ENST00000447792.2	Zinc finger protein 185 (LIM-domain protein ZNF185) (P1-A)
ENST00000454925.1	Zinc finger protein 185 (LIM-domain protein ZNF185) (P1-A)
ENST00000671360.1	Assembled from SLRseq reads (SRP049776)
ENST00000361887.5	paraneoplastic antigen like 5
ENST00000535214.6	CAGE supported TSS
ENST00000535214.6	MANE_select
ENST00000535214.6	paraneoplastic antigen like 5
ENST00000421798.5	MANE_select
ENST00000538162.2	probably a pseudogene because it's lost the end of 3' UTR
ENST00000356661.7	MANE_select
ENST00000356661.7	melanoma antigen, family A, 1 (directs expression of antigen MZ2-E)
ENST00000436629.3	MANE_select
ENST00000650114.2	MANE_select
ENST00000650114.2	NP_001073954
ENST00000650114.2	confirm experimentally
ENST00000370251.3	NP_001073954
ENST00000445091.3	MANE_select
ENST00000330912.2	alternative 5' UTR
ENST00000330912.2	alternatively spliced 5'UTR; shares CDS with Em:U82695.1.4
ENST00000330912.2	three prime repair exonuclease 2
ENST00000338525.2	alternative 5' UTR
ENST00000338525.2	alternatively spliced 5'UTR; shares CDS with Em:U82695.1.1
ENST00000338525.2	three prime repair exonuclease 2
ENST00000334497.2	alternative 5' UTR
ENST00000334497.2	alternatively spliced 5'UTR; shares CDS with Em:U82695.1.6
ENST00000334497.2	three prime repair exonuclease 2
ENST00000370232.1	alternative 5' UTR
ENST00000370232.1	alternatively spliced 5'UTR; shares CDS with Em:U82695.1.5
ENST00000370232.1	three prime repair exonuclease 2
ENST00000370211.9	upstream ATG
ENST00000460898.5	three prime repair exonuclease 2
ENST00000484394.5	three prime repair exonuclease 2
ENST00000437046.6	three prime repair exonuclease 2
ENST00000491286.5	three prime repair exonuclease 2
ENST00000490165.5	three prime repair exonuclease 2
ENST00000490453.5	three prime repair exonuclease 2
ENST00000464993.1	three prime repair exonuclease 2
ENST00000331595.9	MANE_select
ENST00000331595.9	biglycan
ENST00000472615.5	biglycan
ENST00000480756.1	biglycan
ENST00000431891.1	biglycan
ENST00000492658.1	biglycan
ENST00000349466.6	ATPase, Ca++ transporting, plasma membrane 3
ENST00000370186.5	ATPase, Ca++ transporting, plasma membrane 3
ENST00000393842.5	ATPase, Ca++ transporting, plasma membrane 3
ENST00000393842.5	novel transcript
ENST00000460549.1	ATPase, Ca++ transporting, plasma membrane 3
ENST00000496610.1	novel transcript
ENST00000576892.8	MANE_select
ENST00000429336.5	MGC29729
ENST00000614850.1	MGC29729
ENST00000446370.1	putative novel transcript
ENST00000434763.1	keratin 18 (KRT18) pseudogene
ENST00000342782.4	MANE_select
ENST00000342782.4	alternative 5' UTR
ENST00000342782.4	alternative 5' UTR; shares CDS with U52111.9-001
ENST00000370150.5	alternative 5' UTR
ENST00000340888.8	MANE_select
ENST00000447676.6	NP_001034671.2
ENST00000439087.5	alternative 5' UTR
ENST00000419804.5	alternative 5' UTR
ENST00000458354.5	alternative 5' UTR
ENST00000434652.5	alternative 5' UTR
ENST00000425526.5	alternative 5' UTR
ENST00000423545.1	alternative 5' UTR
ENST00000253122.10	MANE_select
ENST00000253122.10	solute carrier family 6 (neurotransmitter transporter, creatine), member 8
ENST00000476466.1	solute carrier family 6 (neurotransmitter transporter, creatine), member 8
ENST00000430077.6	NP_001136278
ENST00000466243.1	solute carrier family 6 (neurotransmitter transporter, creatine), member 8
ENST00000467402.1	solute carrier family 6 (neurotransmitter transporter, creatine), member 8
ENST00000429147.1	solute carrier family 6 (neurotransmitter transporter, creatine), member 8
ENST00000485324.1	solute carrier family 6 (neurotransmitter transporter, creatine), member 8
ENST00000413787.1	solute carrier family 6 (neurotransmitter transporter, creatine), member 8
ENST00000442457.1	solute carrier family 6 (neurotransmitter transporter, creatine), member 8
ENST00000457723.1	solute carrier family 6 (neurotransmitter transporter, creatine), member 8
ENST00000458587.8	CAGE supported TSS
ENST00000458587.8	LR annotation
ENST00000458587.8	NP_001132929
ENST00000345046.12	CAGE supported TSS
ENST00000345046.12	LR annotation
ENST00000345046.12	MANE_select
ENST00000647529.1	alternative 5' UTR
ENST00000672675.1	alternative 5' UTR
ENST00000442093.5	accessory protein BAP31 (BCAP31)
ENST00000442093.5	alternative 5' UTR
ENST00000429550.5	accessory protein BAP31 (BCAP31)
ENST00000429550.5	alternative 5' UTR
ENST00000416815.5	accessory protein BAP31 (BCAP31)
ENST00000416815.5	alternative 5' UTR
ENST00000423827.5	accessory protein BAP31 (BCAP31)
ENST00000423827.5	alternative 5' UTR
ENST00000430088.1	accessory protein BAP31 (BCAP31)
ENST00000430088.1	alternative 5' UTR
ENST00000468947.1	novel transcript
ENST00000218104.6	ATP-binding cassette, sub-family D (ALD), member 1
ENST00000218104.6	MANE_select
ENST00000443684.2	ATP-binding cassette, sub-family D (ALD), member 1
ENST00000434284.1	novel transcript
ENST00000416854.1	novel transcript
ENST00000361971.10	MANE_select
ENST00000361971.10	Plexin B3
ENST00000411613.5	Plexin B3
ENST00000482654.1	Plexin B3
ENST00000455214.1	Plexin B3
ENST00000485980.1	Plexin B3
ENST00000448847.1	Plexin B3
ENST00000469190.1	Plexin B3
ENST00000472415.1	Plexin B3
ENST00000370104.5	serine/threonine kinase 23
ENST00000370108.7	serine/threonine kinase 23
ENST00000370101.8	MANE_select
ENST00000370101.8	NP_055185
ENST00000430541.5	serine/threonine kinase 23
ENST00000370100.5	serine/threonine kinase 23
ENST00000458681.1	serine/threonine kinase 23
ENST00000217901.10	MANE_select
ENST00000427365.6	isocitrate dehydrogenase 3 (NAD+) gamma
ENST00000444338.1	isocitrate dehydrogenase 3 (NAD+) gamma
ENST00000320857.7	signal sequence receptor, delta (translocon-associated protein delta)
ENST00000491833.5	signal sequence receptor, delta (translocon-associated protein delta)
ENST00000370087.5	alternative 5' UTR
ENST00000370087.5	signal sequence receptor, delta (translocon-associated protein delta)
ENST00000482902.5	signal sequence receptor, delta (translocon-associated protein delta)
ENST00000460616.5	signal sequence receptor, delta (translocon-associated protein delta)
ENST00000370086.8	MANE_select
ENST00000370086.8	alternative 5' UTR
ENST00000370086.8	signal sequence receptor, delta (translocon-associated protein delta)
ENST00000370085.3	signal sequence receptor, delta (translocon-associated protein delta)
ENST00000471724.5	signal sequence receptor, delta (translocon-associated protein delta)
ENST00000471880.5	signal sequence receptor, delta (translocon-associated protein delta)
ENST00000486204.5	signal sequence receptor, delta (translocon-associated protein delta)
ENST00000485612.5	signal sequence receptor, delta (translocon-associated protein delta)
ENST00000447375.1	signal sequence receptor, delta (translocon-associated protein delta)
ENST00000484792.5	novel transcript
ENST00000475140.5	novel transcript
ENST00000483693.5	novel transcript
ENST00000480418.5	novel transcript
ENST00000480650.3	novel transcript
ENST00000468491.1	novel transcript
ENST00000370060.7	MANE_select
ENST00000370058.7	L1 cell adhesion molecule (hydrocephalus, stenosis of aqueduct of Sylvius 1, MASA (mental retardation, aphasia, shuffling gait and adducted thumbs) syndrome, spastic paraplegia 1)
ENST00000458029.1	alternative 5' UTR
ENST00000616195.1	novel transcript
ENST00000646375.1	CAGE supported TSS
ENST00000646375.1	LR annotation
ENST00000646375.1	MANE_select
ENST00000430697.1	GENCODE experimental pipeline
ENST00000393721.5	GENCODE experimental pipeline
ENST00000370028.7	Rho GTPase activating protein 4
ENST00000420383.5	Rho GTPase activating protein 4
ENST00000350060.10	MANE_select
ENST00000350060.10	Rho GTPase activating protein 4
ENST00000466928.5	Rho GTPase activating protein 4
ENST00000454164.5	Rho GTPase activating protein 4
ENST00000467421.1	Rho GTPase activating protein 4
ENST00000442172.1	Rho GTPase activating protein 4
ENST00000461739.1	Rho GTPase activating protein 4
ENST00000488269.5	Rho GTPase activating protein 4
ENST00000464845.6	MANE_select
ENST00000482485.1	ARD1 homolog, N-acetyltransferase (S. cerevisiae)
ENST00000370015.8	GENCODE experimental pipeline
ENST00000393712.7	GENCODE experimental pipeline
ENST00000488481.1	ARD1 homolog, N-acetyltransferase (S. cerevisiae)
ENST00000393700.8	MANE_select
ENST00000393700.8	NP_002901
ENST00000310441.12	MANE_select
ENST00000369984.4	host cell factor C1 (VP16-accessory protein)
ENST00000461098.1	host cell factor C1 (VP16-accessory protein)
ENST00000438219.1	putative novel transcript
ENST00000369982.5	MANE_select
ENST00000431598.1	alternative 5' UTR
ENST00000369974.6	interleukin-1 receptor-associated kinase 1
ENST00000369980.8	MANE_select
ENST00000369980.8	interleukin-1 receptor-associated kinase 1
ENST00000369973.7	interleukin-1 receptor-associated kinase 1
ENST00000444254.1	interleukin-1 receptor-associated kinase 1
ENST00000437278.5	interleukin-1 receptor-associated kinase 1
ENST00000393687.6	interleukin-1 receptor-associated kinase 1
ENST00000443220.1	interleukin-1 receptor-associated kinase 1
ENST00000467236.1	interleukin-1 receptor-associated kinase 1
ENST00000453960.7	MANE_select
ENST00000415944.3	alternative 5' UTR
ENST00000630151.2	alternative 5' UTR
ENST00000369951.9	MANE_select
ENST00000369951.9	upstream_ATG-15
ENST00000595290.6	MANE_select
ENST00000595290.6	opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan) (CBD, DCB, GCP, CBBM)
ENST00000369929.8	novel protein similar to opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)
ENST00000430419.1	GENCODE experimental pipeline
ENST00000617225.4	alternative 5' UTR
ENST00000617213.1	non canonical TEC
ENST00000621631.1	LOC102030688
ENST00000621631.1	testis expressed 28 pseudogene
ENST00000369915.8	MANE_select
ENST00000369856.8	CAGE supported TSS
ENST00000369850.10	CAGE supported TSS
ENST00000369850.10	LR annotation
ENST00000369850.10	MANE_select
ENST00000462590.1	filamin A, alpha (actin binding protein 280)
ENST00000474358.5	filamin A, alpha (actin binding protein 280)
ENST00000415241.1	GENCODE experimental pipeline
ENST00000474072.1	filamin A, alpha (actin binding protein 280)
ENST00000466319.1	filamin A, alpha (actin binding protein 280)
ENST00000369842.9	MANE_select
ENST00000486738.5	novel transcript
ENST00000494443.5	novel transcript
ENST00000471965.1	novel transcript
ENST00000436473.5	alternative 5' UTR
ENST00000369817.7	CAGE supported TSS
ENST00000369817.7	MANE_select
ENST00000369807.6	MANE_select
ENST00000369807.6	alternative 5' UTR
ENST00000369808.7	alternative 5' UTR
ENST00000014935.7	alternative 5' UTR
ENST00000447892.1	GENCODE experimental pipeline
ENST00000451865.5	alternative 5' UTR
ENST00000412184.1	GENCODE experimental pipeline
ENST00000424626.5	alternative 5' UTR
ENST00000432135.1	alternative 5' UTR
ENST00000601016.6	CAGE supported TSS
ENST00000601016.6	LR annotation
ENST00000601016.6	MANE_select
ENST00000613002.4	NP_851830.1
ENST00000652354.1	CAGE supported TSS
ENST00000479875.1	CAGE supported TSS
ENST00000479875.1	upstream ATG
ENST00000651139.1	CAGE supported TSS
ENST00000677342.1	align_id:3773388|asmbl_263553
ENST00000449556.5	GENCODE experimental pipeline
ENST00000439372.6	CHESS_transcripts
ENST00000679241.1	align_id:3773386|asmbl_263551
ENST00000369762.7	MANE_select
ENST00000491569.5	FLJ33764
ENST00000678317.1	align_id:3773389|asmbl_263554
ENST00000677332.1	align_id:3773383|asmbl_263548
ENST00000619046.5	align_id:3773382|asmbl_263547
ENST00000447750.7	MANE_select
ENST00000393600.8	MANE_select
ENST00000393600.8	XAP5
ENST00000369682.4	MANE_select
ENST00000369660.9	MANE_select
ENST00000421431.1	GENCODE experimental pipeline
ENST00000651600.1	MANE_select
ENST00000651600.1	genebuild_only_MANE
ENST00000453912.1	XX-FW89031B12.2-002
ENST00000369643.5	XX-FW89031B12.3-004
ENST00000447601.7	MANE_select
ENST00000447601.7	XX-FW89031B12.3-003
ENST00000621967.4	novel transcript
ENST00000612856.4	novel transcript
ENST00000434658.6	novel transcript
ENST00000475657.1	putative novel transcript
ENST00000449971.5	novel transcript
ENST00000416319.5	novel transcript
ENST00000412894.5	novel transcript
ENST00000393562.10	CAGE supported TSS
ENST00000393562.10	LR annotation
ENST00000393562.10	MANE_select
ENST00000393562.10	upstream ATG
ENST00000440286.5	alternative 5' UTR
ENST00000422680.5	alternative 5' UTR
ENST00000594239.6	CAGE supported TSS
ENST00000594239.6	MANE_select
ENST00000615874.4	GENCODE experimental pipeline
ENST00000619941.4	GENCODE experimental pipeline
ENST00000615186.4	GENCODE experimental pipeline
ENST00000611071.4	alternative 5' UTR
ENST00000601944.1	activating transcription factor 4 pseudogene (tax-responsive enhancer element B67 pseudogene)
ENST00000599837.3	MANE_select
ENST00000599837.3	Manolis Kellis' Group at MIT evaluated this CDS as dubious on the basis of low cross-species conservation in studies done as part of the Biosapiens/ENCODE project
ENST00000359887.4	identical to CTAG1A
ENST00000424127.3	MANE_select
ENST00000424127.3	NP_001075042
ENST00000369568.8	GRB2-associated binding protein 3
ENST00000369550.10	MANE_select
ENST00000452771.5	GENCODE experimental pipeline
ENST00000369534.8	MANE_select
ENST00000360256.9	MANE_select
ENST00000620016.2	MANE_select
ENST00000419615.1	No evidence visible on Fmap - pseudogene identified by Yale and UCSC as part of the ENCODE project - annotated by dottering evidence directly
ENST00000369498.8	MANE_select
ENST00000369484.8	MANE_select
ENST00000369476.8	MANE_select
ENST00000369476.8	mature T-cell proliferation 1
ENST00000369462.5	AT-AC splice site between exons 4 and 5
ENST00000330045.12	AT-AC splice site
ENST00000330045.12	MANE_select
ENST00000399026.1	AT-AC splice site
ENST00000535916.5	von Hippel-Lindau binding protein 1
ENST00000286428.7	MANE_select
ENST00000286428.7	von Hippel-Lindau binding protein 1
ENST00000460509.1	von Hippel-Lindau binding protein 1
ENST00000415016.1	pseudogene similar to part of CD84 antigen (leukocyte antigen) (CD84)
ENST00000369454.4	MANE_select
ENST00000369454.4	RAB39B, member RAS oncogene family
ENST00000369449.7	MANE_select
ENST00000369449.7	chloride intracellular channel 2
ENST00000465553.5	chloride intracellular channel 2
ENST00000491205.1	chloride intracellular channel 2
ENST00000426370.1	PTK9 protein tyrosine kinase 9 pseudogene (PTK9)
ENST00000452540.1	PHD finger protein pseudogene
ENST00000419384.1	pseudogene similar to part of steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2) (SRD5A2)
ENST00000444722.1	novel transcript
ENST00000412436.1	novel transcript
ENST00000354514.6	MANE_select
ENST00000369505.4	MANE_select
ENST00000622749.2	MANE_select
ENST00000615853.1	H2A histone family, member B
ENST00000615853.1	MANE_select
ENST00000433624.1	novel transcript
ENST00000452506.1	novel transcript
ENST00000447347.1	putative novel transcript
ENST00000334398.8	MANE_select
ENST00000334398.8	trimethyllysine hydroxylase, epsilon
ENST00000675642.1	trimethyllysine hydroxylase, epsilon
ENST00000449645.2	trimethyllysine hydroxylase, epsilon (TMLHE)
ENST00000369439.4	trimethyllysine hydroxylase, epsilon
ENST00000487422.1	trimethyllysine hydroxylase, epsilon
ENST00000461075.1	trimethyllysine hydroxylase, epsilon
ENST00000302805.7	sprouty homolog 3 (Drosophila)
ENST00000412936.6	adenosylmethionine decarboxylase 1 (AMD1) pseudogene
ENST00000422618.6	novel pseudogene
ENST00000286448.12	MANE_select
ENST00000286448.12	synaptobrevin-like 1
ENST00000479687.6	synaptobrevin-like 1
ENST00000488344.6	synaptobrevin-like 1
ENST00000463317.6	synaptobrevin-like 1
ENST00000262640.11	synaptobrevin-like 1
ENST00000460621.6	NP_001138621
ENST00000460621.6	synaptobrevin-like 1
ENST00000421233.6	pseudogene similar to part of transient receptor potential cation channel, subfamily C, member 6 (TRPC6)
ENST00000369423.7	NP_789743.2
ENST00000489233.6	interleukin 9 receptor
ENST00000494962.6	interleukin 9 receptor
ENST00000399966.9	not best-in-genome evidence
ENST00000476066.6	novel transcript
ENST00000461007.6	novel transcript
ENST00000496011.6	novel transcript
ENST00000479401.6	non canonical TEC
ENST00000479401.6	novel transcript
ENST00000340131.12	novel transcript
ENST00000492963.6	novel transcript
ENST00000460206.6	QC splicing correct
ENST00000460206.6	non canonical TEC
ENST00000460206.6	not best-in-genome evidence
ENST00000475594.6	novel transcript
ENST00000482170.6	novel transcript
ENST00000484415.6	novel transcript
ENST00000483079.6	novel transcript
ENST00000496301.6	novel transcript
ENST00000483286.6	novel transcript
ENST00000464205.6	novel transcript
ENST00000383070.2	MANE_select
ENST00000250784.13	MANE_select
ENST00000652562.1	Assembled from SLRseq reads (ENA:SRP049776)
ENST00000155093.8	MANE_select
ENST00000155093.8	genebuild_only_MANE
ENST00000443793.1	alternative 5' UTR
ENST00000654222.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000665487.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000444263.6	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000655607.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000653660.1	Assembled from SLRseq reads (SRP049776)
ENST00000321217.5	MANE_select
ENST00000559055.2	alternative 5' UTR
ENST00000622698.4	alternative 5' UTR
ENST00000621505.1	alternative 5' UTR
ENST00000215473.7	confirm experimentally
ENST00000400457.3	NP_116755.1
ENST00000470569.1	not best-in-genome evidence
ENST00000451062.1	not best-in-genome evidence
ENST00000452103.5	not best-in-genome evidence
ENST00000651267.1	CAGE supported TSS
ENST00000355162.6	alternative 5' UTR
ENST00000346432.3	alternative 5' UTR
ENST00000383032.6	MANE_select
ENST00000652723.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000413466.3	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000651670.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000653671.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000664089.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657784.1	Assembled from SLRseq reads (SRP049776)
ENST00000426950.6	similar to TSPY-S
ENST00000383008.1	similar to TSPY-L
ENST00000426661.1	not best-in-genome evidence
ENST00000432394.1	similar to CYorf16
ENST00000287721.13	MANE_select
ENST00000287721.13	similar to TSPY-S
ENST00000383000.1	similar to TSPY-L
ENST00000477879.1	not best-in-genome evidence
ENST00000433321.5	not best-in-genome evidence
ENST00000436801.5	similar to CYorf16
ENST00000450658.5	similar to CYorf16
ENST00000457222.6	MANE_select
ENST00000451548.6	MANE_select
ENST00000414596.5	similar to CYorf16
ENST00000418016.5	similar to CYorf16
ENST00000428845.6	MANE_select
ENST00000428845.6	similar to TSPY-S
ENST00000444056.1	similar to TSPY-L
ENST00000430228.1	identical to testis-specific transcript, Y-linked 21
ENST00000417072.1	identical to testis-specific transcript, Y-linked 2
ENST00000250805.5	identical to testis-specific transcript, Y-linked 1
ENST00000452889.1	identical to testis-specific transcript, Y-linked 23
ENST00000440408.5	DKFZp434I143
ENST00000338981.7	MANE_select
ENST00000471409.1	FLJ33043
ENST00000652216.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000662422.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651143.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651143.2	NAGNAG splice site
ENST00000656670.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000454054.5	alternative 5' UTR
ENST00000336079.8	MANE_select
ENST00000336079.8	alternative 5' UTR
ENST00000284856.4	MANE_select
ENST00000250823.5	MANE_select
ENST00000645399.1	alternative 5' UTR
ENST00000458667.1	FLJ23014
ENST00000445421.1	pseudogene of the adrenal gland protein AD-004 isoform of TAF9
ENST00000250838.6	MANE_select
ENST00000442362.2	pseudogene of the known gene with interim symbol MGC57211
ENST00000442362.2	this pseudogene represents the first and third coding exons of the parent gene
ENST00000454958.1	pseudogene of the adrenal gland protein AD-004 isoform of TAF9
ENST00000426660.1	KIAA0664 protein pseudogene
ENST00000419557.1	FLJ23014
ENST00000307393.3	MANE_select
ENST00000304790.3	MANE_select
ENST00000650923.1	align_id:3773816|asmbl_263981
ENST00000667260.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667260.1	Assembled from SLRseq reads (SRP049776)
ENST00000660026.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000663061.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000669716.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670243.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000670354.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000657901.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000664804.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667640.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000454875.2	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000667262.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000658318.1	Assembled from SLRseq reads (SRP049776)
ENST00000656768.1	Assembled from SLRseq reads (SRP049776)
ENST00000669869.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000651286.1	Assembled from PacBio Capture-seq (GSE93848) reads - CAGE_PolyA_HiSeq
ENST00000667617.1	Assembled from PacBio CLS reads - CAGE_PolyA_HiSeq (GSE93848)
ENST00000331787.2	TTTY14
ENST00000667450.1	Assembled from SLRseq reads (SRP049776)
ENST00000441139.5	FLJ93821
ENST00000400605.5	FLJ39821
ENST00000650676.1	CAGE supported TSS
ENST00000459719.6	FLJ45474
ENST00000566193.1	confirm experimentally
ENST00000317961.9	MANE_select
ENST00000653234.1	Assembled from SLRseq reads (SRP049776)
ENST00000652994.1	Assembled from SLRseq reads (SRP049776)
ENST00000666990.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000670518.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000661812.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000657696.1	Assembled from SLRseq reads (SRP049776)
ENST00000660111.1	Assembled from SLRseq reads (SRP049776)
ENST00000662223.1	Assembled from PacBio CLS reads - noCAGE_noPolyA_noHiSeq (GSE93848)
ENST00000658891.1	Assembled from SLRseq reads (SRP049776)
ENST00000654569.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000667496.1	Assembled from SLRseq reads (SRP049776)
ENST00000659275.1	Assembled from SLRseq reads (SRP049776)
ENST00000666666.1	Assembled from PacBio CLS reads - CAGE_xor_PolyA_HiSeq (GSE93848)
ENST00000361365.7	MANE_select
ENST00000464196.5	FLJ45762
ENST00000651369.1	Assembled from PacBio Capture-seq reads (GEO:GSE93848)
ENST00000629237.2	MANE_select
ENST00000382764.1	FLJ22714
ENST00000383020.7	MANE_select
ENST00000382707.6	MANE_select
ENST00000382680.5	MANE_select
ENST00000303804.5	MANE_select
ENST00000303766.12	MANE_select
ENST00000481858.1	not best-in-genome evidence
ENST00000470460.1	not best-in-genome evidence
ENST00000253838.3	identical to testis-specific transcript, Y-linked 6
ENST00000303728.5	MANE_select
ENST00000436568.1	identical to testis-specific transcript, Y-linked 4 (TTTY4)
ENST00000602732.5	alternative 5' UTR
ENST00000331070.8	MANE_select
ENST00000331070.8	NMD exception
ENST00000382440.5	not best-in-genome evidence
ENST00000306882.4	isoform b
ENST00000382407.1	isoform a
ENST00000441906.1	identical to testis-specific transcript, Y-linked 17
ENST00000420149.1	identical to testis-specific transcript, Y-linked 4 (TTTY4)
ENST00000602770.5	alternative 5' UTR
ENST00000382392.5	MANE_select
ENST00000382392.5	NMD exception
ENST00000382392.5	PMID:1272427
ENST00000382392.5	PMID:1517755
ENST00000382287.5	MANE_select
ENST00000382287.5	NMD exception
ENST00000602680.1	alternative 5' UTR
ENST00000421387.2	identical to testis-specific transcript, Y-linked 17
ENST00000361963.3	isoform a
ENST00000306609.4	isoform b
ENST00000306589.7	confirm experimentally
ENST00000306589.7	not best-in-genome evidence
