DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu Structure of phycobilisome from the red alga Griffithsia pacifica. Structure of phycobilisome from the red alga Griffithsia pacifica. Nature 2017 imex curation Zhang J., Ma J., Liu D., Qin S., Sun S., Zhao J., Sui SF. suisf@mail.tsinghua.edu.cn 29-Mar-2021: Contacted by IntAct-Help. Only protein-protein interactions imex curation Red alga Griffithsia pacifica molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column weight by comassie molecular weight estimation by coomasie staining weight by comassie Zhang J., Ma J., Liu D., Qin S., Sun S., Zhao J., Sui SF. suisf@mail.tsinghua.edu.cn Accepted 2021-JAN-18 AT 12:13 GMT AT 12:13 GMT by PPORRAS Nature 2017 Only protein-protein interactions imex curation imex curation Structure of phycobilisome from the red alga Griffithsia pacifica. Structure of phycobilisome from the red alga Griffithsia pacifica. Nature 2017 imex curation Zhang J., Ma J., Liu D., Qin S., Sun S., Zhao J., Sui SF. suisf@mail.tsinghua.edu.cn 29-Mar-2021: Contacted by IntAct-Help. Only protein-protein interactions imex curation Red alga Griffithsia pacifica 3d-em 3D electron microscopy 3D-EM electron tomog predetermined predetermined participant predetermined Zhang J., Ma J., Liu D., Qin S., Sun S., Zhao J., Sui SF. suisf@mail.tsinghua.edu.cn Accepted 2021-JAN-18 AT 12:13 GMT AT 12:13 GMT by PPORRAS Nature 2017 Only protein-protein interactions imex curation imex curation a0a291fec1_gripa rpeCf9 protein protein Red alga Griffithsia pacifica MHRKPSLSHNLNHNKPCLQPSFCANHLSRFDLPTSSPRPLASVVVLSAMAFVSAPHSSIRSSNSSFTPTTPARRPVCHNAPVVTPRMTFGQTVKETLESNPRYGNLVKLAAAGGVDLEVSNCTVFAPTNGALSGERYDELLADPVAARNVVLRHILPDQVLTSKAIKGCSFWDSLPGGPLPYEGIGPVVKIAGVRLLNESSDDECDNGTIHVIDGIISTPLAKPTPFAGVFEPSVPMLESRDDIATAVYPPVTPDVRRAFGAASAPSTVGGRKAMGLIKQLPFWMYGPPFNASKQEDFEPISIANPDVSSVDYQLMPPGSVIVQPDEVSAAKMLPVSGMSKHIGKTKRLVEGDGLSDYSRLD 9BE22BE8C22701DC a0a291fea8_gripa apcA protein protein Red alga Griffithsia pacifica MSIVTKSIVNADAEARYLSPGELERIKSFVLSGQRRLRIAQTLTENREMIVKKGGQQLFQKRTDVVSPGGNAYGEEMTATCLRDLDYYLRLVTYGIVAGDVTPIEEIGLVGVKEMYNSLGTPISGVSEGVRCMKDVACSLLSGEDSAEAGFYFDYTLGAMQ ABB3AB45DE5FA9D5 a0a291fea4_gripa apcC protein protein Red alga Griffithsia pacifica MGYDMDGSGSGSLNPLRIKSSGVEKDRRAFKITYCLPSESRLFTYRELQNVYTTKLVPFSSWYAEQQRIQKMGGKIFKVELAAGGQMRSCGNS 20CD7A4CAF29C64F a0a291feb5_gripa rpeGr5 protein protein Red alga Griffithsia pacifica MAFVSATPVSQAVRPAPALGAQLAASPLRPEIAHASNSSTPRMGYGAYSYITDKTKGHVNQYYVDKFRIASDWTKGTPKTQADAVLGRTFKGAVLVPTEGIPQEFDPAIAPRDNTVDPDPRIAESEGEVYPWDINYFDPQFLPSAYSDVNDPETVDSSFADFRSSMWESRRESLTAQDFGAVARVQRIKNGLDEKYLMTLDGMLDARYARFQKIAEPAVLSPTGTPMTEIPGTPYLGSVGAMDFIAQEEESVAFWKSGPSTTPVNYKRPSGAQTPNLPYNTAAPVAAINEAQEAQKGQMQLSAGDDE 5C605D573566A681 a0a291feb3_gripa rpeCz3 protein protein Red alga Griffithsia pacifica MYAFVNTTGVSATRASIPHSGLQTICGAPSRPAPATRSVSKAVIKMTGDYGITLDTLLYHPTPTISGVEDKDLICYSVWKQVFGNAYVMESERADAYVPESMFRAGQIPLREFVRGVALSATYRRRFFECCGPYRAVELNFRHLLGRAPVSQKEVSEHIKLIAAKGFEAEINSYIDSEEYEEAFGDDLVPYMRFKGTYTTCEEFNRMCTMYSAPGTTDKSLSIRARTQGIENPNHVLSLDGAGVPSKLVSIIAMGSHSSFVPVKRALPSRPDLEFGQSTKAPAQVNENANPVSRVEVCMGSYMYLTAEEAAQYNTDVMEQDQIASYAETEISEAETEIARLQAKIAELNLIK FD3BCFB561F38A1E a0a291feb7_gripa rpeGc2 protein protein Red alga Griffithsia pacifica MVAFVAPTPSVASSATRFATGTTRLTNDANVPSVAATRRSAHAPPSMRVLDGLDTVTQDSYSFSRYVLGPFQPSVLNANSSEYEREIAIRAAYRHVFGNAYIMEEELAEVEVTASQYKLGNLTAKEFIRALAKSSAYKTRFFEGASQYRFVELNFMHLLGRAPDTQEEVATHMNIYHAKGFDAEIDSYIDSEEYDSVFGDYNVPFLRFRGAYTPCDSFNKQCALKGGWANSDKAMGGAALSGYNGSDGRQMCDRISAYVTSDTTDYESVAGNSPLLTTSPNWLAYPDPAIAPTPAFISPQEVREARARVEKLREAYNEEIAKTQARKNAMAPFRAMVEDMAPMLDRGVTFGDPMLVHPEAKLPENESALADLGGKSSDYKRFWSTMETNTVSRLERDLEEAKAELRVLEKGVDALTPMSTSVELRSASQDVNVGLDKEEEAIARPRIATKPRVKKVVDATEKRSLNLPGGIKINLPF C73DFA33D4D01F71 a0a291fea5_gripa rpcA protein protein Red alga Griffithsia pacifica MKTPITEAIASADSQGRFLSNAELQSITGRYQRASASLEAAKQLTGNASRLITGAAQAVYTKFPFVTQMPGPTYASNAIGKAKCARDIGYYLRMTTYCLVVGATGPMDEYLVAGLEEINRSFELSPSWYIAALENIKNDHGLSGQAANEANTYLDYAINVLS 98D41F5C26AADA72 a0a291fea0_gripa apcB protein protein Red alga Griffithsia pacifica MQDAITAVINTADVQGKYLDDNSLDKLRGYFETGELRVRAAATIAANAATIIKESVAKALLYSDITRPGGNMYTTRRYAACIRDLDYYLRYATYGMLAGDPSILDERVLNGLKETYNSLGVPIGATVQAIQAMKEVTASLVGTNAGQEMAVYFDYICSGLS 26A07F7FF426DD14 a0a291feb4_gripa rpeGr6 protein protein Red alga Griffithsia pacifica MQAFIPSSSLSALTGAPVQKSSALTSLRTTRSATPCTTRMAAYPYTGSGYGGVGVPYANDKVGQLYKVTPTSNIVDTAASVSIFSTLVTLLAQTGLDYELKKSGPFTVFAPTNDAFTDLLNAHGFASFGPLLRPGNTDTLRDVLLYHVVRGTYDARDVVGKSVTVETMGGDEVTISCMKRKLVVGSSAVIRKDVSCSNGVIHVIKSVLKPPSYVRPDIRPQSQPMPESIVQDVYGKMLTPRQALGIDAAPESGALTSFYQ EB7AB293E04A48AE a0a291feb1_gripa rpeGr4 protein protein Red alga Griffithsia pacifica MAAAFTAPVNLKGSSLTSNTLPAVCSRPAPLTLTPRAQADLPPPGIPSGQDPLDNAPLRHYVPRPVETYEDRGFATILPRTWEGETNTIGAGDIEPVTKEEVEESRKVPVDAASTGAFVEYARMMKEERAQALADQARRNSAPTSGRPTCGETEGTEFVSNARPILVDGVKVVEYWGVPNGPVPRLFGGPGE 8DB8F96293308DA5 a0a291feb6_gripa rpeG1 protein protein Red alga Griffithsia pacifica MSIPVLNYSLSTQNQRVYSFEYLPNEEQPKCYTTDNLPAAIEMDQIIWAAYRQIFSEHQLLSSTRQPFLESQLRFNQITVKDFIKGLILSDAFRYLNYDVNNNYRFVEMCIQRILGREIYNHREKLAFAVIIGSQGLEAFIDLLINSEEYEDNFGDNMIPYQRRRIIAQRSKGEIPFNLKTPRLGKDFLYKQGMPQLLWAGPVHRFRPQEQSPKAGDPALFLSMVQDLDGVL E8878C878EC2F2E2 a0a291fe95_gripa apcD protein protein Red alga Griffithsia pacifica VSIISEIILNADNELRYPSIGELQNLQDYFSTSESRIVISCILRDNEQQIIQAASNKIFQIHPDYIAPGGNAEGSRKRSLCLRDYGWYLRLVTYGLLAGDKQSIEKIGLIGVKEMYNSLGVPILGMIDAIDCLKNASINLLDEKQALIVSPYFDFIIQGMY 4E086531A4CEF311 a0a291feb0_gripa rpeCz2 protein protein Red alga Griffithsia pacifica MASKLAFSSPLNFPVRTLLPTNTCVAANSSRTSVACPFTTSMAFSSIDRILTADPVAFPNGTESVIRATYIQVFGNAHVMDSEREELATAESNVCRTGNVREFVRAIVLSENYKSRFFYSVSQYRFIELMFKHILGRAPESRAEYAEAMAVYNTKGYEPLVSWFVDSLEYNENFGSWIVPYGIYQGCYSSNELFNRSVAMRLAPGCSDKGRSAMLQYCVLSGDSPNWLSISKALPAGTEKGTGLCIGGHWQSSQRNKQAPVKGKSKIPGGVIVTEE F20A67432F79A8B5 a0a291fec7_gripa rpeCg8 protein protein Red alga Griffithsia pacifica MEPAFVSSFAPKPVITTSLTASSPLSVTARKNAVSTPTMAAYSLDKYAQMSGANAVDTSGASPAASSTWWVAYRDSLKERFNPFRAPANPEVDVGKSKEYFFAQTAYGRILNMVNASRFGKGGDPDELVPPPGAQPADQYMANCIVKQYKAMATPTGVYTTQCTEGVVRGQAEEARNAALSAAFRMKQRSSAQKFGDFCESRRMAVIGAHGCSYEESLLTKFPAAARAYTTASSEAKGNCVRYADGTSPAETYMAACVDKQMKFRSVPMGVYDVLCSDGNTKGVAEYKRVSAMSVRFRSNQMSTLYKMQAKYNNAAYARNYFGHGCSYEENLFNKYPAVSASMRPSTARY B22215C8342177BF a0a291fee7_gripa rpeCg4 protein protein Red alga Griffithsia pacifica MDSPAFAVNGMFSAVKVGNSSFTENKVTAVSKTAPTASVRMVVDPFQRKFQSIGKIGIDYSRPKKLATYKRVGYSVGLDFPNAVSMAGHYSLTDCTRAGGAAKILMKYDEYCAKGMLQVYKRSAVSTGVYTTKCTEATQPGVAYDVRVFNRTAAFRQAQKPVNVRLGEQYAARKACVTLAHNCSREEAQFKNMPMSCATFLAGKMEAMGTCYRTVRPSSKAEDYMAGSVRMQVYQKGNASGVYPVGGCEDGHAKGDADLRRVIALASEYRAAQQGAAAVTGAQYASSKMAIQLYGHSCNHEEGQFCDYPAVAAAMCRY 673FD283F024CF3F a0a291feb8_gripa rpeGc3 protein protein Red alga Griffithsia pacifica MAFVSATSVAVSTRATSLTGRSVSSSNAPPARTPTRPSPCMAIEFQTYSGGLDRVSLEPYSITRYLFKPAPATVTDGDKDVAINAGLRQLFGNAYIMEEERAEFYNAESKFRCGEITAREFARAVALSNAYRSRFFNTVSQYRFFELNFKHFLGRAPLNQVEYSKHFKIFAEGGYEAEINSYFDDPEYDEVFGDDCMPFTRFRGTYAPINQFNRMCVLEGGFAMSDKQRPVQLMTSLAANVPPAAYRVVDGLPAIPNAEHPTRKFELPNASLERFRNEVEVAKARELQLRVELKEAYAKRDEYRSGFAGFRAMAADMDISMLPGPRFQGRVENYPTWDGKSAPWGKSGVDTLSGVEKRPAKEIAKKEFQLERIKQLVVDLERRVAVLEAEREQPALTPEPLMFELEGLPQIVKEEEVVEEVTTPGTGVSELSADFDSTTMVTPDIDPESEDSGIVAPKTVEVETSRLAKDVGDLPGKLMKELEEKTKAEGKEFGGPKDGRLSFPGDGSEMVIGG 15217CB0AE01E806 a0a291fe97_gripa rpcB protein protein Red alga Griffithsia pacifica MLDAFAKVVAQADARGEFLSNKQLNSLETMIGEGNKRLDIVNKINSNASTIVTNSARALFAEQPQLIQPGGNAYTSRRMAACLRDMEIVLRYVSYAMTAGDSSVLDDRCLNGLRETYQALGTPGTSVAVAIQKMKEASIALANDLNGVPLGDCSSLNSELAVYFDRAAAAVV 8E3A39A08A019127 a0a291fe93_gripa apcF protein protein Red alga Griffithsia pacifica MQDTIASIVNRYDCTGKYLDNVAISELESYFSTAIIRLKVIELINQSSSKIIQEAANRLYTEQPELLRPGGNSYTTRRYSACLRDIEYYLRYASYALIAGNTTILSERVLDGLKETYSSLNVPIGPTVRSIQLLEDIICNEFIILAQKQNISTNITFIQQPFNYMVKYLSEKNI 9D640EE0ADFC678D a0a291feb9_gripa rpeCg6 protein protein Red alga Griffithsia pacifica MAFITSFTPRNLASRSEFTSTSVSTRRPTLARNTIRALFTPPVDEFMASSVQSQYIQKACPSGVPPIQCIEGVTSDQPYAARTLKRQTELRYHQLPVAVKLRKAYETRRAAVVATHGCSHEEGRVLSYPRMASAMLIGQAEASKACSRYFVPNGPAEKHMLQAVENRYMAAVNGSGVFSGACTDGQTRYEAYLMQLRGKSAEFRAKQYSTFEKESMKYAARKQALIQKGHDCNAEEVIFSNYPIVASAMRPTFGYYTPIVKNPGIGSVINIMRPVWDKNSSISSPATLVGVGGFVQP 1043FBF8F33332B1 a0a291feb2_gripa rpeC1 protein protein Red alga Griffithsia pacifica MAFVPIVNLRPALSAPSTSSFSGVRLADAPTSTPAPVVARLGTVLGNSSLDKLGLDKFVDRFEVNEAGRPDGFSADYEVIIRACYMQIFANAYIMESERAEMAKAESEFRDGRFTVKEFCRALAKSYQYRKRFFDGRPLYGAIELCFKHILGRTPDGLEHYRAKSAVYDTKGYEAFIDAFFDDGEYDAFYDSYCVPFYRGHLTTSNLSMAAFTHMFQVVRGSSTSDKANPRTMTNQITLNQAGIQSIPLAVVAPGADGATFLAPDASAGSWQTGFSGATKARTSHGSRQEKGKMFRIEVANNTQYSAVGGGSGIKLQSRSGKFYKMRNMAPAKVSTFRRANNVYLVPFDELSATYIKIHKNGGSIASITPV B21E08924FF88D3A a0a291fec5_gripa rpeCg5 protein protein Red alga Griffithsia pacifica MYAFAPNTPFTASKAVVGKTSFTSPLPAQSESRPTAAPTMVLRTVLRSPVPSGAATVYGYVGRGNISVILAKADEYMAKSVRKQYLAKSNPYGTFGVQCTEGSVKFAADFSRIRALNAEFRAKLGSASKKTFDMYENRKNAISNSHGCHHEETQFVGYKGVSSMYNVSKSEASGSCSRYASPETVVEAAMLRFMDIQVKMAANPTGVYNISCNEGAARGQAEDVRVAALNAAFRQGQKSLGKLLDEKYQQKKQGYSFAHGCNYEEGLINKYPALGAAFRSKSYGY 4802DA74B4ED77B9 a0a291fec0_gripa rpeCg7 protein protein Red alga Griffithsia pacifica MTAPAFTAPISLTTPHAFSARGLRPATTSSAAPTAVPTPRMSAADKYMARTVTRTAKSAAAGFGVYTPQCTEASGGANTAEATRLAVLAADFRLRQAPLGARFADLYETRRAAVIQACNSSAEEGYATSFPSRAAASVAGRAEGLRACSRYFPQKPPVEEYMAACVDRQYKQMRVHGGVYSTLCADGRSAGDADTARIAALGARFRAQHLSKSQQTQMRYNAMSEARMLARGLCTYEEAQFNAYPKMAGMMRYGTGVYAASVRGPELVVGNKSMTVAEQVNGVNAESYWPSSKVRPAVARGTSPWMGLGVVKSYAAMSEAAMAYGIEQQSKPYVPQKYEGWSSGWKPKSSLM 7240A918E9BFD5A2 apca-apcb-1 2 17 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 16 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 23 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 3 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 24 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 21 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 18 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 8 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 13 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 6 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 11 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 7 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 22 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 12 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 15 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 4 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 9 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 5 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 10 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 19 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 14 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified 20 predetermined predetermined participant predetermined structure determination identification by structure determination identification by structure determination structure determination experimental particp experimental participant identification experimental particp unspecified role unspecified role neutral component neutral component purified purified physical association physical association Fig 1, Extended Data Fig 2, Extended Data Table 1 apca-apcb-2 1 17 unspecified role unspecified role neutral component neutral component purified purified 16 unspecified role unspecified role neutral component neutral component purified purified 23 unspecified role unspecified role neutral component neutral component purified purified 3 unspecified role unspecified role neutral component neutral component purified purified 24 unspecified role unspecified role neutral component neutral component purified purified 21 unspecified role unspecified role neutral component neutral component purified purified 18 unspecified role unspecified role neutral component neutral component purified purified 8 unspecified role unspecified role neutral component neutral component purified purified 13 unspecified role unspecified role neutral component neutral component purified purified 6 unspecified role unspecified role neutral component neutral component purified purified 11 unspecified role unspecified role neutral component neutral component purified purified 7 unspecified role unspecified role neutral component neutral component purified purified 22 unspecified role unspecified role neutral component neutral component purified purified 12 unspecified role unspecified role neutral component neutral component purified purified 15 unspecified role unspecified role neutral component neutral component purified purified 4 unspecified role unspecified role neutral component neutral component purified purified 9 unspecified role unspecified role neutral component neutral component purified purified 5 unspecified role unspecified role neutral component neutral component purified purified 10 unspecified role unspecified role neutral component neutral component purified purified 19 unspecified role unspecified role neutral component neutral component purified purified 14 unspecified role unspecified role neutral component neutral component purified purified 20 unspecified role unspecified role neutral component neutral component purified purified physical association physical association Extended Data Fig 1