HPIDb Host Pathogen Interaction database http://www.agbase.msstate.edu/hpi/main.html Identification of the interactome between fish plasma proteins and Edwardsiella tarda reveals tissue-specific strategies against bacterial infection. Identification of the interactome between fish plasma proteins and Edwardsiella tarda reveals tissue-specific strategies against bacterial infection. The international journal of biochemistry & cell biology 2016 imex curation Li H., Huang X., Zeng Z., Peng XX., Peng B. pengb26@mail.sysu.edu.cn 15-Nov-2017: Contacted by IntAct-Help. Only protein-protein interactions imex curation in vitro In vitro anti tag coip anti tag coimmunoprecipitation anti tag coip western blot western blot Immuno blot Immuno blot Li H., Huang X., Zeng Z., Peng XX., Peng B. I see 18 in fig 4B-G and that is what I added. For 4C and 4D, the figures and associated text do not match!? pengb26@mail.sysu.edu.cn Accepted 2017-OCT-04 AT 14:57 BST AT 14:57 BST by ORCHARD The international journal of biochemistry & cell biology 2016 imex curation Identification of the interactome between fish plasma proteins and Edwardsiella tarda reveals tissue-specific strategies against bacterial infection. Identification of the interactome between fish plasma proteins and Edwardsiella tarda reveals tissue-specific strategies against bacterial infection. The international journal of biochemistry & cell biology 2016 imex curation Li H., Huang X., Zeng Z., Peng XX., Peng B. pengb26@mail.sysu.edu.cn 15-Nov-2017: Contacted by IntAct-Help. Only protein-protein interactions imex curation in vitro In vitro far western blotting far western blotting Affinity blotting Affinity blotting western blot western blot Immuno blot Immuno blot Li H., Huang X., Zeng Z., Peng XX., Peng B. I see 18 in fig 4B-G and that is what I added. For 4C and 4D, the figures and associated text do not match!? pengb26@mail.sysu.edu.cn Accepted 2017-OCT-04 AT 14:57 BST AT 14:57 BST by ORCHARD The international journal of biochemistry & cell biology 2016 imex curation Identification of the interactome between fish plasma proteins and Edwardsiella tarda reveals tissue-specific strategies against bacterial infection. Identification of the interactome between fish plasma proteins and Edwardsiella tarda reveals tissue-specific strategies against bacterial infection. The international journal of biochemistry & cell biology 2016 imex curation Li H., Huang X., Zeng Z., Peng XX., Peng B. pengb26@mail.sysu.edu.cn 15-Nov-2017: Contacted by IntAct-Help. Only protein-protein interactions imex curation in vitro In vitro array technology array technology antibody detection identification by antibody antibody detection Li H., Huang X., Zeng Z., Peng XX., Peng B. I see 18 in fig 4B-G and that is what I added. For 4C and 4D, the figures and associated text do not match!? pengb26@mail.sysu.edu.cn Accepted 2017-OCT-04 AT 14:57 BST AT 14:57 BST by ORCHARD The international journal of biochemistry & cell biology 2016 imex curation d0z7r1_edwte ETAE_1639 protein protein Edwardsiella tarda (strain EIB202) Edwardsiella tarda (strain EIB202) MKKQIAGLVLGAVGILTAQVAQAGSSTLSLGYAQSKVQNFKNMPGVNLQYRYEWDSALSVMASLSVLQNDVDSTTHWWGVTSQDHVKARYNSLLIGPAWRLNEAVSLYAAAGMSHSQMARDYVSSAGQAPIHYADTVNALAYGGGVLVNLSAHVTANLGYEGSQTRVQGQRRHVNGVNVGLGYRF 72459BF8861CDA4A etae-2675_edwte Virulence-related outer membrane protein protein protein edwta Edwardsiella tarda d0za02_edwte OMP_b-brl domain-containing protein ETAE_0245 protein protein Edwardsiella tarda (strain EIB202) Edwardsiella tarda (strain EIB202) MKAFTKLALFVGLVSGATLANAAGINNTGYYAGAKMGISAEHLFDQKDVNGNGMSNDNKGVGNAGLVFGYNFENQFSLPVRAELDYTFRANATSSHTNDAAETNDSRLGLQTLMVNGYYDIKTGTPFTPYVGAGIGYANVSLKNDMNGDNVQSNSNNFAWSVGTGVIYNVNERLDLDLGYKYLDAGKASAGNSQAKVTTHDVTLGVNYYF 2EEE9E74ADE28A7F novel protein_crucian carp Novel protein protein protein crucian carp Carassius carassius similar to Q7T128 a0a0a1han6_carax Hemopexin Wap65-1 protein protein crucian carp Carassius carassius MKLIQMLTLCLALSLSLAAPSHHKEDHVQQDEPQGHQHELHHGANLDRCGGMEFDAIAVNEEGIPYFFKGDHLFKGFHGQAELSNETFPELDEHHHLGHVDAAFRMHSEDSPEHHDHQFFFLDTKVFSYYKHKLEKDYPKDISELFPGIPDHLDAAVECPKPDCANDTIIFFKGDEIYHFDMKTKKVDEKEFKSMPNCTGAFRYMDHYYCFHGHQFSKFDPITGEVQGKYPKETRDYFMRCPHFGQKTTDEHIEREQCSRVQLDAITSDDDGSVYAFRGHHFLSITGDKFHSDTIESAFKELHSEVDAVFSYEGHLYMIKDNEVFVYKVGEPHTHLEGYPKPLKEVLGIEGPVDAAFVCADHHIAHIVKGQTVYDVDLKATPRVPVKEGSIAHLKKIDAAMCGPKGVTAVIGNHYYQFGSPMIMMMAKIMPEQHRVSQGLFGCDH 74673CC8485537F5 d0zfs8_edwte Outer membrane protein A ompA Outer membrane porin A ETAE_1267 protein protein Edwardsiella tarda (strain EIB202) Edwardsiella tarda (strain EIB202) MKKTAIALAVALAGFATVAQAAPKDDTWYVGGKLGWSHFISNSFEDMGTTKSHPNQLGAGAFFGYQANPYLGFEMGYDWLGRMGYTGDVNAKFKSQGVQLAAKLSYPLMDDLDVYTRLGGMVWRSDIHGAADGGDYTSSHDTGVSPLAAIGVEYALNKDWATRLDYQYVNKVGTRSETGARPDNTMLSLGVVYRFGQDEVAAPAPIPAPAPAPVVETKRFTLKSDVLFNFNKYTLKAEGRQALDQLYSQLSSMDPKDGSVVVLGYTDRIGSDQYNLKLSKQRAQTVVDYLVSKGIPADKIAARGMGKADPVTGSTCDNVKPRAALINCLAPDRRVVIEVKGIKEEVSQPQA 32C6B5EF4FC20703 ceru_crucian carp Ceruloplasmin protein protein crucian carp Carassius carassius similar to Q7T128 c1q_crucian carp Complement C1q protein protein crucian carp Carassius carassius similar to Q7T128 d0z894_edwte ETAE_1826 protein protein Edwardsiella tarda (strain EIB202) Edwardsiella tarda (strain EIB202) MKRNLLAVVIPALLVAGAANAAEIYNKDGNKLDLYGKVDGLHYFSSDSSKDGDQSYVRFGFKGETQINDQLTGYGQWEAQANVNQPESNSSNFFTRLGFAGLKYGNYGSIDYGRNYGVLYDIEGWTDVLPEFGGDTSAQTDNYMAQRANNLATYRNNGFFGLVDGLDFALQYQGKNDGHAYGKDADGSYSWDGAPLSNNAREIQGQNGDGFGMSTTYDLGWGISAGAAYTTSNRTTEQKWSGNQANSNVAGGNKAQSWGAGLKYDANNIYLATMYTETQNMTPFGSTGIANKAKNFEAVAQYQFDFGLRPSIAYLQSKASELNSYNGFNGGKADLVKYVDLGATYYFNKNMSTYVDYKINLLDENDFTRANSINTDDIVALGLVYQF A4D4680079EE874C d0z7v5_edwte pcpY ETAE_1685 protein protein Edwardsiella tarda (strain EIB202) Edwardsiella tarda (strain EIB202) MMKRLIIVAIATATLAGCANTSTLSGDVYSANQAKQVQQVTYGTIVSMEPVQIQAGSEANMIGTIGGAVIGGLLGNTIGGGTGRSLATAAGAVAGGVAGNSIEGAVNRTNGVQLVIRLDSGKTIAVVQKNDKQAFRVNQRVMLLSNGSTVNVSPM B88F335CEE8746DC hemopexin- etae_0245-1 3 6 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) 8 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4A hemopexin-etae_1826-1 3 12 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) 8 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4A hemopexin-pagc-1 3 4 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) 8 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4A hemopexin-pcp-1 3 13 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) 8 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4A hemopexin-ompa-1 3 9 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) 8 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4A c1q-etae_1826-1 3 11 unspecified role unspecified role bait bait mbp mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) 12 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) direct interaction direct interaction 4A c1q-pagc-1 3 4 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) 11 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4A c1q-pcp-1 3 13 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) 11 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4A c1q-ompa-1 3 9 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) 11 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4A ceru-pcp-1 3 13 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) 10 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4A ceru-ompa-1 3 9 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) 11 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4A novel protein-atae_2045-1 3 6 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) 11 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4A novel protein-atae_1826-1 3 12 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) 11 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4A novel protein-pagc-1 3 4 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) 7 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4A novel protein-atae_2675-1 3 10 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) 5 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) direct interaction direct interaction 4A novel protein-pcp-1 3 13 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) 11 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4A novel protein-ompa-1 3 9 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) 11 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4A hemopexin_etae 0245-1 2 6 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) 8 unspecified role unspecified role prey prey mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4B hemopexin-pcpy-1 2 13 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) 8 unspecified role unspecified role prey prey mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4G hemopexin-atae_1826-1 2 12 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) 8 unspecified role unspecified role prey prey mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4E hemopexin-pagc-2 2 4 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) 8 unspecified role unspecified role prey prey mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4F novel protein-atae_0245-1 2 6 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) 11 unspecified role unspecified role prey prey mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4B c1q-atae_1826-1 2 10 unspecified role unspecified role prey prey mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) 12 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) direct interaction direct interaction 4E c1q-pagc-2 2 4 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) 7 unspecified role unspecified role prey prey mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4F c1q-pcpy-1 2 13 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) 11 unspecified role unspecified role prey prey mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4G ceru-ompa-2 2 9 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) 11 unspecified role unspecified role prey prey mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4C ceru-pcpy-1 2 13 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) 7 unspecified role unspecified role prey prey mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4G novel protein-atae_2675-2 2 7 unspecified role unspecified role prey prey mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) 5 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) direct interaction direct interaction 4D novel protein-atae-1826 2 12 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) 11 unspecified role unspecified role prey prey mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4E novel protein-pagc-2 2 4 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) 10 unspecified role unspecified role prey prey mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4F novel protein-pcpy-1 2 13 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) 10 unspecified role unspecified role prey prey mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4G novel protein-ompa-2 2 9 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) 7 unspecified role unspecified role prey prey mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4C etae_2675-c1q-1 2 5 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) 7 unspecified role unspecified role prey prey mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4D etae_2675-hemopexin-1 2 5 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) 8 unspecified role unspecified role prey prey mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4D atae_1826-ceru-1 2 12 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) 10 unspecified role unspecified role prey prey mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4E ceru-ompa-3 1 9 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) 11 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4H ceru-pagc-1 1 4 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) 11 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4H ceru-pcpy-2 1 13 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) 11 unspecified role unspecified role bait bait mbp tag mbp tag maltose binding protein tag maltose binding protein tag maltose binding protein tag mbp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined ecoli Escherichia coli (strain K12) direct interaction direct interaction 4H