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  <entry>
    <source releaseDate="2022-02-03">
      <names>
        <shortLabel>DIP</shortLabel>
        <fullName>Database of Interacting Proteins</fullName>
      </names>
      <xref>
        <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0465" refType="identity" refTypeAc="MI:0356"/>
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      </xref>
      <attributeList>
        <attribute name="postaladdress">611 Young Drive East; Los Angeles CA 90095; USA</attribute>
        <attribute name="url" nameAc="MI:0614">http://dip.doe-mbi.ucla.edu/</attribute>
        <attribute name="contact-email" nameAc="MI:0634">dip@mbi.ucla.edu</attribute>
      </attributeList>
    </source>
    <experimentList>
      <experimentDescription id="1">
        <names>
          <fullName>Direct single-molecule observation of a protein living in two opposed native structures.</fullName>
        </names>
        <bibref>
          <xref>
            <primaryRef db="pubmed" dbAc="MI:0446" id="19506258" refType="primary-reference" refTypeAc="MI:0358"/>
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          <attributeList>
            <attribute name="publication title" nameAc="MI:1091">Direct single-molecule observation of a protein living in two opposed native structures.</attribute>
            <attribute name="journal" nameAc="MI:0885">Proceedings of the National Academy of Sciences of the United States of America</attribute>
            <attribute name="publication year" nameAc="MI:0886">2009</attribute>
            <attribute name="curation depth" nameAc="MI:0955">imex curation</attribute>
            <attribute name="imex curation" nameAc="MI:0959"/>
            <attribute name="author-list" nameAc="MI:0636">Gambin Y.,  Schug A.,  Lemke EA.,  Lavinder JJ.,  Ferreon AC.,  Magliery TJ.,  Onuchic JN.,  Deniz AA.</attribute>
            <attribute name="full coverage" nameAc="MI:0957">Only protein-protein interactions</attribute>
            <attribute name="imex curation" nameAc="MI:0959"/>
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        </bibref>
        <xref>
          <primaryRef db="imex" dbAc="MI:0670" id="IM-14749" refType="imex-primary" refTypeAc="MI:0662"/>
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          <hostOrganism ncbiTaxId="-1">
            <names>
              <shortLabel>in vitro</shortLabel>
              <fullName>In vitro</fullName>
            </names>
          </hostOrganism>
        </hostOrganismList>
        <interactionDetectionMethod>
          <names>
            <shortLabel>fret</shortLabel>
            <fullName>fluorescent resonance energy transfer</fullName>
            <alias type="go synonym" typeAc="MI:0303">FRET</alias>
            <alias type="go synonym" typeAc="MI:0303">RET</alias>
            <alias type="go synonym" typeAc="MI:0303">FRET analysis</alias>
            <alias type="synonym" typeAc="MI:1041">FRET</alias>
            <alias type="synonym" typeAc="MI:1041">RET</alias>
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            <alias type="synonym" typeAc="MI:1041">fret</alias>
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        </interactionDetectionMethod>
        <participantIdentificationMethod>
          <names>
            <shortLabel>predetermined</shortLabel>
            <fullName>predetermined participant</fullName>
            <alias type="synonym" typeAc="MI:1041">predetermined</alias>
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            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0396" refType="identity" refTypeAc="MI:0356"/>
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        </participantIdentificationMethod>
        <attributeList>
          <attribute name="author-list" nameAc="MI:0636">Gambin Y., Schug A., Lemke EA., Lavinder JJ., Ferreon AC., Magliery TJ., Onuchic JN., Deniz AA.</attribute>
          <attribute name="comment" nameAc="MI:0612">DIP original experiment: DIP-134310X</attribute>
          <attribute name="journal" nameAc="MI:0885">Proceedings of the National Academy of Sciences of the United States of America</attribute>
          <attribute name="publication year" nameAc="MI:0886">2009</attribute>
          <attribute name="curation depth" nameAc="MI:0955">IMEx</attribute>
          <attribute name="title" nameAc="MI:1091">Direct single-molecule observation of a protein living in two opposed native structures.</attribute>
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      </experimentDescription>
      <experimentDescription id="2">
        <names>
          <fullName>Direct single-molecule observation of a protein living in two opposed native structures.</fullName>
        </names>
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          <xref>
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            <attribute name="publication title" nameAc="MI:1091">Direct single-molecule observation of a protein living in two opposed native structures.</attribute>
            <attribute name="journal" nameAc="MI:0885">Proceedings of the National Academy of Sciences of the United States of America</attribute>
            <attribute name="publication year" nameAc="MI:0886">2009</attribute>
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            <attribute name="author-list" nameAc="MI:0636">Gambin Y.,  Schug A.,  Lemke EA.,  Lavinder JJ.,  Ferreon AC.,  Magliery TJ.,  Onuchic JN.,  Deniz AA.</attribute>
            <attribute name="full coverage" nameAc="MI:0957">Only protein-protein interactions</attribute>
            <attribute name="imex curation" nameAc="MI:0959"/>
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        <xref>
          <primaryRef db="imex" dbAc="MI:0670" id="IM-14749" refType="imex-primary" refTypeAc="MI:0662"/>
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        <hostOrganismList>
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            <names>
              <shortLabel>in vitro</shortLabel>
              <fullName>In vitro</fullName>
            </names>
          </hostOrganism>
        </hostOrganismList>
        <interactionDetectionMethod>
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            <shortLabel>competition binding</shortLabel>
            <fullName>competition binding</fullName>
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        <participantIdentificationMethod>
          <names>
            <shortLabel>predetermined</shortLabel>
            <fullName>predetermined participant</fullName>
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            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0396" refType="identity" refTypeAc="MI:0356"/>
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        </participantIdentificationMethod>
        <attributeList>
          <attribute name="author-list" nameAc="MI:0636">Gambin Y., Schug A., Lemke EA., Lavinder JJ., Ferreon AC., Magliery TJ., Onuchic JN., Deniz AA.</attribute>
          <attribute name="comment" nameAc="MI:0612">DIP original experiment: DIP-134309X</attribute>
          <attribute name="journal" nameAc="MI:0885">Proceedings of the National Academy of Sciences of the United States of America</attribute>
          <attribute name="publication year" nameAc="MI:0886">2009</attribute>
          <attribute name="curation depth" nameAc="MI:0955">IMEx</attribute>
          <attribute name="title" nameAc="MI:1091">Direct single-molecule observation of a protein living in two opposed native structures.</attribute>
        </attributeList>
      </experimentDescription>
    </experimentList>
    <interactorList>
      <interactor id="3">
        <names>
          <shortLabel>rop_ecolx</shortLabel>
          <fullName>Regulatory protein rop</fullName>
          <alias type="gene name" typeAc="MI:0301">rop</alias>
          <alias type="gene name synonym" typeAc="MI:0302">RNA one modulator</alias>
        </names>
        <xref>
          <primaryRef db="uniprotkb" dbAc="MI:0486" id="P03051" version="72" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="intact" dbAc="MI:0469" id="EBI-15786748" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1RPR" version="SP_128"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1YO7" version="SP_128"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="2GHY" version="SP_128"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="2IJH" version="SP_128"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="2IJI" version="SP_128"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="2IJJ" version="SP_128"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="2IJK" version="SP_128"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="3K79" version="SP_128"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="4DO2" version="SP_128"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1RPO" version="SP_128"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0042802" version="SP_128"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR000769" version="SP_128"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR035962" version="SP_128"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1B6Q" version="SP_128"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1F4M" version="SP_128"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1F4N" version="SP_128"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1GMG" version="SP_128"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1GTO" version="SP_128"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1NKD" version="SP_128"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1QX8" version="SP_128"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1ROP" version="SP_128"/>
          <secondaryRef db="dip" dbAc="MI:0465" id="DIP-48900N"/>
          <secondaryRef db="refseq" dbAc="MI:0481" id="NP_040367.1"/>
          <secondaryRef db="refseq" dbAc="MI:0481" id="NP_863575.1"/>
          <secondaryRef db="refseq" dbAc="MI:0481" id="WP_000165985.1"/>
          <secondaryRef db="refseq" dbAc="MI:0481" id="YP_006940171.1"/>
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          <secondaryRef db="refseq" dbAc="MI:0481" id="YP_794132.1"/>
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        <interactorType>
          <names>
            <shortLabel>protein</shortLabel>
            <fullName>protein</fullName>
          </names>
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            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0326" refType="identity" refTypeAc="MI:0356"/>
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            <secondaryRef db="so" dbAc="MI:0601" id="SO:0000358" refType="see-also" refTypeAc="MI:0361"/>
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        </interactorType>
        <organism ncbiTaxId="562">
          <names>
            <shortLabel>ecolx</shortLabel>
            <fullName>Escherichia coli</fullName>
          </names>
        </organism>
        <sequence>MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSCLARFGDDGENL</sequence>
        <attributeList>
          <attribute name="crc64">0A1986BD29CF6FE4</attribute>
        </attributeList>
      </interactor>
    </interactorList>
    <interactionList>
      <interaction id="4" imexId="IM-14749-1">
        <names>
          <shortLabel>rop-1</shortLabel>
        </names>
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          <primaryRef db="dip" dbAc="MI:0465" id="DIP-103871E" refType="identity" refTypeAc="MI:0356"/>
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          <experimentRef>2</experimentRef>
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        <participantList>
          <participant id="5">
            <interactorRef>3</interactorRef>
            <biologicalRole>
              <names>
                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
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                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
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            <experimentalRoleList>
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                <names>
                  <shortLabel>unspecified role</shortLabel>
                  <fullName>unspecified role</fullName>
                </names>
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                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
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            <hostOrganismList>
              <hostOrganism ncbiTaxId="562">
                <names>
                  <shortLabel>ecolx</shortLabel>
                  <fullName>Escherichia coli</fullName>
                </names>
              </hostOrganism>
            </hostOrganismList>
          </participant>
        </participantList>
        <interactionType>
          <names>
            <shortLabel>direct interaction</shortLabel>
            <fullName>direct interaction</fullName>
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      </interaction>
      <interaction id="6" imexId="IM-14749-2">
        <names>
          <shortLabel>rop-2</shortLabel>
        </names>
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          <primaryRef db="dip" dbAc="MI:0465" id="DIP-103871E" refType="identity" refTypeAc="MI:0356"/>
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        <participantList>
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            <interactorRef>3</interactorRef>
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              <names>
                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
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                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
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                <names>
                  <shortLabel>fluorescence accept</shortLabel>
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              </experimentalRole>
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            <featureList>
              <feature id="8">
                <names>
                  <shortLabel>Alex647-label</shortLabel>
                  <fullName>Alex647-label</fullName>
                </names>
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                  <primaryRef db="intact" dbAc="MI:0469" id="EBI-15786808" refType="identity" refTypeAc="MI:0356"/>
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                <featureType>
                  <names>
                    <shortLabel>alexa label</shortLabel>
                    <fullName>alexa label</fullName>
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                    <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0384" refType="identity" refTypeAc="MI:0356"/>
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                <featureRangeList>
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                    <startStatus>
                      <names>
                        <shortLabel>undetermined</shortLabel>
                        <fullName>undetermined sequence position</fullName>
                        <alias type="synonym" typeAc="MI:1041">undetermined</alias>
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                        <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0339" refType="identity" refTypeAc="MI:0356"/>
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                        <shortLabel>undetermined</shortLabel>
                        <fullName>undetermined sequence position</fullName>
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                  </featureRange>
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              </feature>
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            <hostOrganismList>
              <hostOrganism ncbiTaxId="562">
                <names>
                  <shortLabel>ecolx</shortLabel>
                  <fullName>Escherichia coli</fullName>
                </names>
              </hostOrganism>
            </hostOrganismList>
          </participant>
          <participant id="9">
            <interactorRef>3</interactorRef>
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              <names>
                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
              </names>
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                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
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            </biologicalRole>
            <experimentalRoleList>
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                <names>
                  <shortLabel>fluorescence donor</shortLabel>
                  <fullName>fluorescence donor</fullName>
                </names>
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                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0583" refType="identity" refTypeAc="MI:0356"/>
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                <names>
                  <shortLabel>Alexa488-label</shortLabel>
                  <fullName>Alexa488-label</fullName>
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                  <primaryRef db="intact" dbAc="MI:0469" id="EBI-15786805" refType="identity" refTypeAc="MI:0356"/>
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                <featureType>
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                    <shortLabel>alexa 488 label</shortLabel>
                    <fullName>alexa 488 label</fullName>
                  </names>
                  <xref>
                    <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0387" refType="identity" refTypeAc="MI:0356"/>
                    <secondaryRef db="intact" dbAc="MI:0469" id="EBI-608904" refType="identity" refTypeAc="MI:0356"/>
                    <secondaryRef db="pubmed" dbAc="MI:0446" id="10449539" refType="primary-reference" refTypeAc="MI:0358"/>
                  </xref>
                </featureType>
                <featureRangeList>
                  <featureRange>
                    <startStatus>
                      <names>
                        <shortLabel>undetermined</shortLabel>
                        <fullName>undetermined sequence position</fullName>
                        <alias type="synonym" typeAc="MI:1041">undetermined</alias>
                      </names>
                      <xref>
                        <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0339" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="intact" dbAc="MI:0469" id="EBI-448295" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                      </xref>
                    </startStatus>
                    <endStatus>
                      <names>
                        <shortLabel>undetermined</shortLabel>
                        <fullName>undetermined sequence position</fullName>
                        <alias type="synonym" typeAc="MI:1041">undetermined</alias>
                      </names>
                      <xref>
                        <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0339" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="intact" dbAc="MI:0469" id="EBI-448295" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                      </xref>
                    </endStatus>
                  </featureRange>
                </featureRangeList>
              </feature>
            </featureList>
            <hostOrganismList>
              <hostOrganism ncbiTaxId="562">
                <names>
                  <shortLabel>ecolx</shortLabel>
                  <fullName>Escherichia coli</fullName>
                </names>
              </hostOrganism>
            </hostOrganismList>
          </participant>
        </participantList>
        <interactionType>
          <names>
            <shortLabel>direct interaction</shortLabel>
            <fullName>direct interaction</fullName>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0407" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-608833" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
          </xref>
        </interactionType>
      </interaction>
    </interactionList>
  </entry>
</entrySet>