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  <entry>
    <source releaseDate="2022-02-03">
      <names>
        <shortLabel>DIP</shortLabel>
        <fullName>Database of Interacting Proteins</fullName>
      </names>
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      <attributeList>
        <attribute name="postaladdress">611 Young Drive East; Los Angeles CA 90095; USA</attribute>
        <attribute name="url" nameAc="MI:0614">http://dip.doe-mbi.ucla.edu/</attribute>
        <attribute name="contact-email" nameAc="MI:0634">dip@mbi.ucla.edu</attribute>
      </attributeList>
    </source>
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      <experimentDescription id="1">
        <names>
          <fullName>Structure of HIV-1 protease in complex with potent inhibitor KNI-272 determined by high-resolution X-ray and neutron crystallography.</fullName>
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            <attribute name="publication title" nameAc="MI:1091">Structure of HIV-1 protease in complex with potent inhibitor KNI-272 determined by high-resolution X-ray and neutron crystallography.</attribute>
            <attribute name="journal" nameAc="MI:0885">Proceedings of the National Academy of Sciences of the United States of America</attribute>
            <attribute name="publication year" nameAc="MI:0886">2009</attribute>
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        <hostOrganismList>
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            <names>
              <shortLabel>ecolx</shortLabel>
              <fullName>Escherichia coli</fullName>
            </names>
          </hostOrganism>
        </hostOrganismList>
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            <shortLabel>x-ray diffraction</shortLabel>
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        <participantIdentificationMethod>
          <names>
            <shortLabel>predetermined</shortLabel>
            <fullName>predetermined participant</fullName>
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        <attributeList>
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          <attribute name="publication year" nameAc="MI:0886">2009</attribute>
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          <fullName>Structure of HIV-1 protease in complex with potent inhibitor KNI-272 determined by high-resolution X-ray and neutron crystallography.</fullName>
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              <shortLabel>ecolx</shortLabel>
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            <shortLabel>neutron diffraction</shortLabel>
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        </attributeList>
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    </experimentList>
    <interactorList>
      <interactor id="3">
        <names>
          <shortLabel>q7ssi0_9hiv1</shortLabel>
          <fullName>Protease</fullName>
          <alias type="gene name synonym" typeAc="MI:0302">Retropepsin</alias>
          <alias type="gene name" typeAc="MI:0301">pol</alias>
        </names>
        <xref>
          <primaryRef db="uniprotkb" dbAc="MI:0486" id="Q7SSI0" version="41" refType="identity" refTypeAc="MI:0356"/>
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          <secondaryRef db="go" dbAc="MI:0448" id="GO:0004190" version="TrEMBL_114"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0042802" version="TrEMBL_114"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR001969" version="TrEMBL_114"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR001995" version="TrEMBL_114"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR018061" version="TrEMBL_114"/>
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          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="2HS1" version="TrEMBL_114"/>
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          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="2I4U" version="TrEMBL_114"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="2IDW" version="TrEMBL_114"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="2IEO" version="TrEMBL_114"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="2NMY" version="TrEMBL_114"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="2NMZ" version="TrEMBL_114"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="2NNK" version="TrEMBL_114"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="2NNP" version="TrEMBL_114"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="3B7V" version="TrEMBL_114"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="3B80" version="TrEMBL_114"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="3OXC" version="TrEMBL_114"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="3S43" version="TrEMBL_114"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="3S53" version="TrEMBL_114"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="3S54" version="TrEMBL_114"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="3S56" version="TrEMBL_114"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="4KB9" version="TrEMBL_114"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="5E5J" version="TrEMBL_114"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="5T8H" version="TrEMBL_114"/>
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          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="6PTP" version="TrEMBL_114"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="6PU8" version="TrEMBL_114"/>
          <secondaryRef db="dip" dbAc="MI:0465" id="DIP-48779N"/>
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        <interactorType>
          <names>
            <shortLabel>protein</shortLabel>
            <fullName>protein</fullName>
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        </interactorType>
        <organism ncbiTaxId="11676">
          <names>
            <shortLabel>9hiv1</shortLabel>
            <fullName>Human immunodeficiency virus 1</fullName>
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        <sequence>PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGSTLNF</sequence>
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          <attribute name="remark-internal">DIP protein Q7SSI0 original sequence version: 41</attribute>
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      </interactor>
    </interactorList>
    <interactionList>
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          <shortLabel>pol-3</shortLabel>
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                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
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                  <shortLabel>unspecified role</shortLabel>
                  <fullName>unspecified role</fullName>
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                  <shortLabel>Region 1-99</shortLabel>
                  <fullName>Region 1-99</fullName>
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                    <shortLabel>binding region</shortLabel>
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                        <shortLabel>certain</shortLabel>
                        <fullName>certain sequence position</fullName>
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                    <end position="99"/>
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              <hostOrganism ncbiTaxId="562">
                <names>
                  <shortLabel>ecolx</shortLabel>
                  <fullName>Escherichia coli</fullName>
                </names>
              </hostOrganism>
            </hostOrganismList>
          </participant>
        </participantList>
        <interactionType>
          <names>
            <shortLabel>direct interaction</shortLabel>
            <fullName>direct interaction</fullName>
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      </interaction>
      <interaction id="7" imexId="IM-14689-2">
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                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
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                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="intact" dbAc="MI:0469" id="EBI-1383079" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                </xref>
              </experimentalRole>
            </experimentalRoleList>
            <featureList>
              <feature id="9">
                <names>
                  <shortLabel>Region 1-99</shortLabel>
                  <fullName>Region 1-99</fullName>
                </names>
                <xref>
                  <primaryRef db="intact" dbAc="MI:0469" id="EBI-15763290" refType="identity" refTypeAc="MI:0356"/>
                </xref>
                <featureType>
                  <names>
                    <shortLabel>binding region</shortLabel>
                    <fullName>binding-associated region</fullName>
                    <alias type="synonym" typeAc="MI:1041">binding region</alias>
                  </names>
                  <xref>
                    <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0117" refType="identity" refTypeAc="MI:0356"/>
                    <secondaryRef db="intact" dbAc="MI:0469" id="EBI-456493" refType="identity" refTypeAc="MI:0356"/>
                    <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                  </xref>
                </featureType>
                <featureRangeList>
                  <featureRange>
                    <startStatus>
                      <names>
                        <shortLabel>certain</shortLabel>
                        <fullName>certain sequence position</fullName>
                        <alias type="synonym" typeAc="MI:1041">certain</alias>
                      </names>
                      <xref>
                        <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0335" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="intact" dbAc="MI:0469" id="EBI-540564" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                      </xref>
                    </startStatus>
                    <begin position="1"/>
                    <endStatus>
                      <names>
                        <shortLabel>certain</shortLabel>
                        <fullName>certain sequence position</fullName>
                        <alias type="synonym" typeAc="MI:1041">certain</alias>
                      </names>
                      <xref>
                        <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0335" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="intact" dbAc="MI:0469" id="EBI-540564" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                      </xref>
                    </endStatus>
                    <end position="99"/>
                  </featureRange>
                </featureRangeList>
              </feature>
            </featureList>
            <hostOrganismList>
              <hostOrganism ncbiTaxId="562">
                <names>
                  <shortLabel>ecolx</shortLabel>
                  <fullName>Escherichia coli</fullName>
                </names>
              </hostOrganism>
            </hostOrganismList>
          </participant>
        </participantList>
        <interactionType>
          <names>
            <shortLabel>direct interaction</shortLabel>
            <fullName>direct interaction</fullName>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0407" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-608833" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
          </xref>
        </interactionType>
      </interaction>
    </interactionList>
  </entry>
</entrySet>