<?xml version='1.0' encoding='UTF-8'?>
<entrySet xmlns="http://psi.hupo.org/mi/mif300" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/mi/mif300 https://raw.githubusercontent.com/HUPO-PSI/miXML/master/3.0/src/MIF300.xsd" level="3" version="0" minorVersion="0">
  <entry>
    <source releaseDate="2022-02-04">
      <names>
        <shortLabel>DIP</shortLabel>
        <fullName>Database of Interacting Proteins</fullName>
      </names>
      <xref>
        <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0465" refType="identity" refTypeAc="MI:0356"/>
        <secondaryRef db="pubmed" dbAc="MI:0446" id="14681454" refType="identity" refTypeAc="MI:0356"/>
        <secondaryRef db="intact" dbAc="MI:0469" id="EBI-1579232" refType="identity" refTypeAc="MI:0356"/>
      </xref>
      <attributeList>
        <attribute name="postaladdress">611 Young Drive East; Los Angeles CA 90095; USA</attribute>
        <attribute name="url" nameAc="MI:0614">http://dip.doe-mbi.ucla.edu/</attribute>
        <attribute name="contact-email" nameAc="MI:0634">dip@mbi.ucla.edu</attribute>
      </attributeList>
    </source>
    <experimentList>
      <experimentDescription id="1">
        <names>
          <fullName>Desulfovibrio desulfuricans iron hydrogenase: the structure shows unusual coordination to an active site Fe binuclear center.</fullName>
        </names>
        <bibref>
          <xref>
            <primaryRef db="pubmed" dbAc="MI:0446" id="10368269" refType="primary-reference" refTypeAc="MI:0358"/>
            <secondaryRef db="doi" dbAc="MI:0574" id="10.1016/s0969-2126(99)80005-7" refType="primary-reference" refTypeAc="MI:0358"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-15488722" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="imex" dbAc="MI:0670" id="IM-23722" refType="imex-primary" refTypeAc="MI:0662"/>
          </xref>
          <attributeList>
            <attribute name="publication title" nameAc="MI:1091">Desulfovibrio desulfuricans iron hydrogenase: the structure shows unusual coordination to an active site Fe binuclear center.</attribute>
            <attribute name="journal" nameAc="MI:0885">Structure (London, England : 1993)</attribute>
            <attribute name="publication year" nameAc="MI:0886">1999</attribute>
            <attribute name="curation depth" nameAc="MI:0955">imex curation</attribute>
            <attribute name="imex curation" nameAc="MI:0959"/>
            <attribute name="author-list" nameAc="MI:0636">Nicolet Y.,  Piras C.,  Legrand P.,  Hatchikian CE.,  Fontecilla-Camps JC.</attribute>
            <attribute name="full coverage" nameAc="MI:0957">Only protein-protein interactions</attribute>
            <attribute name="imex curation" nameAc="MI:0959"/>
          </attributeList>
        </bibref>
        <xref>
          <primaryRef db="imex" dbAc="MI:0670" id="IM-23722" refType="imex-primary" refTypeAc="MI:0662"/>
          <secondaryRef db="dip" dbAc="MI:0465" id="DIP-263241X" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="wwpdb" dbAc="MI:0805" id="1HFE" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="pubmed" dbAc="MI:0446" id="10368269" refType="primary-reference" refTypeAc="MI:0358"/>
          <secondaryRef db="doi" dbAc="MI:0574" id="10.1016/s0969-2126(99)80005-7" refType="primary-reference" refTypeAc="MI:0358"/>
        </xref>
        <hostOrganismList>
          <hostOrganism ncbiTaxId="882">
            <names>
              <shortLabel>desvh</shortLabel>
              <fullName>Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303)</fullName>
            </names>
          </hostOrganism>
        </hostOrganismList>
        <interactionDetectionMethod>
          <names>
            <shortLabel>x-ray diffraction</shortLabel>
            <fullName>x-ray crystallography</fullName>
            <alias type="go synonym" typeAc="MI:0303">X-ray</alias>
            <alias type="synonym" typeAc="MI:1041">X-ray</alias>
            <alias type="synonym" typeAc="MI:1041">x-ray diffraction</alias>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0114" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-1272" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
          </xref>
        </interactionDetectionMethod>
        <participantIdentificationMethod>
          <names>
            <shortLabel>predetermined</shortLabel>
            <fullName>predetermined participant</fullName>
            <alias type="synonym" typeAc="MI:1041">predetermined</alias>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0396" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-1465" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
          </xref>
        </participantIdentificationMethod>
        <attributeList>
          <attribute name="author-list" nameAc="MI:0636">Nicolet Y., Piras C., Legrand P., Hatchikian CE., Fontecilla-Camps JC.</attribute>
          <attribute name="comment" nameAc="MI:0612">DIP original experiment: DIP-263241X</attribute>
          <attribute name="journal" nameAc="MI:0885">Structure (London, England : 1993)</attribute>
          <attribute name="publication year" nameAc="MI:0886">1999</attribute>
          <attribute name="curation depth" nameAc="MI:0955">IMEx</attribute>
          <attribute name="title" nameAc="MI:1091">Desulfovibrio desulfuricans iron hydrogenase: the structure shows unusual coordination to an active site Fe binuclear center.</attribute>
        </attributeList>
      </experimentDescription>
    </experimentList>
    <interactorList>
      <interactor id="2">
        <names>
          <shortLabel>phfl_desvh</shortLabel>
          <fullName>Periplasmic [Fe] hydrogenase large subunit</fullName>
          <alias type="gene name" typeAc="MI:0301">hydA</alias>
          <alias type="gene name synonym" typeAc="MI:0302">Fe hydrogenlyase</alias>
          <alias type="locus name" typeAc="MI:0305">DVU_1769</alias>
        </names>
        <xref>
          <primaryRef db="uniprotkb" dbAc="MI:0486" id="P07598" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="ensemblbacteria" id="AAS96246" version="SP_155" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="intact" dbAc="MI:0469" id="EBI-9012432" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="refseq" dbAc="MI:0481" id="WP_010939057.1"/>
          <secondaryRef db="dip" dbAc="MI:0465" id="DIP-6186N"/>
          <secondaryRef db="refseq" dbAc="MI:0481" id="YP_010987.1"/>
          <secondaryRef db="ensemblbacteria" id="AAS96246" version="SP_155" refType="transcript"/>
          <secondaryRef db="ensemblbacteria" id="DVU_1769" version="SP_155" refType="gene"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0008901" version="SP_155"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0042597" version="SP_155"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0051539" version="SP_155"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR004108" version="SP_155"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR009016" version="SP_155"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR013352" version="SP_155"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR017896" version="SP_155"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR017900" version="SP_155"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1E08" version="SP_155"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1GX7" version="SP_155"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1HFE" version="SP_155"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005506" version="SP_155"/>
        </xref>
        <interactorType>
          <names>
            <shortLabel>protein</shortLabel>
            <fullName>protein</fullName>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0326" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-619654" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
            <secondaryRef db="so" dbAc="MI:0601" id="SO:0000358" refType="see-also" refTypeAc="MI:0361"/>
          </xref>
        </interactorType>
        <organism ncbiTaxId="882">
          <names>
            <shortLabel>desvh</shortLabel>
            <fullName>Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303)</fullName>
          </names>
        </organism>
        <sequence>MSRTVMERIEYEMHTPDPKADPDKLHFVQIDEAKCIGCDTCSQYCPTAAIFGEMGEPHSIPHIEACINCGQCLTHCPENAIYEAQSWVPEVEKKLKDGKVKCIAMPAPAVRYALGDAFGMPVGSVTTGKMLAALQKLGFAHCWDTEFTADVTIWEEGSEFVERLTKKSDMPLPQFTSCCPGWQKYAETYYPELLPHFSTCKSPIGMNGALAKTYGAERMKYDPKQVYTVSIMPCIAKKYEGLRPELKSSGMRDIDATLTTRELAYMIKKAGIDFAKLPDGKRDSLMGESTGGATIFGVTGGVMEAALRFAYEAVTGKKPDSWDFKAVRGLDGIKEATVNVGGTDVKVAVVHGAKRFKQVCDDVKAGKSPYHFIEYMACPGGCVCGGGQPVMPGVLEAMDRTTTRLYAGLKKRLAMASANKA</sequence>
        <attributeList>
          <attribute name="remark-internal">DIP protein P07598 original sequence version: 126</attribute>
          <attribute name="crc64">8E70A0775B68AACD</attribute>
        </attributeList>
      </interactor>
      <interactor id="3">
        <names>
          <shortLabel>phfs_desvh</shortLabel>
          <fullName>Periplasmic [Fe] hydrogenase small subunit</fullName>
          <alias type="gene name" typeAc="MI:0301">hydB</alias>
          <alias type="gene name synonym" typeAc="MI:0302">Fe hydrogenlyase small chain</alias>
          <alias type="locus name" typeAc="MI:0305">DVU_1770</alias>
        </names>
        <xref>
          <primaryRef db="uniprotkb" dbAc="MI:0486" id="P07603" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="ensemblbacteria" id="AAS96247" version="SP_143" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="intact" dbAc="MI:0469" id="EBI-9012428" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="refseq" dbAc="MI:0481" id="WP_010939058.1"/>
          <secondaryRef db="dip" dbAc="MI:0465" id="DIP-6187N"/>
          <secondaryRef db="refseq" dbAc="MI:0481" id="YP_010988.1"/>
          <secondaryRef db="ensemblbacteria" id="AAS96247" version="SP_143" refType="transcript"/>
          <secondaryRef db="ensemblbacteria" id="DVU_1770" version="SP_143" refType="gene"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005506" version="SP_143"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0008901" version="SP_143"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0009055" version="SP_143"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0042597" version="SP_143"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0051536" version="SP_143"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR003149" version="SP_143"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR006311" version="SP_143"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR008953" version="SP_143"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR019546" version="SP_143"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR036991" version="SP_143"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1E08" version="SP_143"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1GX7" version="SP_143"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1HFE" version="SP_143"/>
        </xref>
        <interactorType>
          <names>
            <shortLabel>protein</shortLabel>
            <fullName>protein</fullName>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0326" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-619654" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
            <secondaryRef db="so" dbAc="MI:0601" id="SO:0000358" refType="see-also" refTypeAc="MI:0361"/>
          </xref>
        </interactorType>
        <organism ncbiTaxId="882">
          <names>
            <shortLabel>desvh</shortLabel>
            <fullName>Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303)</fullName>
          </names>
        </organism>
        <sequence>MQIASITRRGFLKVACVTTGAALIGIRMTGKAVAAVKQIKDYMLDRINGVYGADAKFPVRASQDNTQVKALYKSYLEKPLGHKSHDLLHTHWFDKSKGVKELTTAGKLPNPRASEFEGPYPYE</sequence>
        <attributeList>
          <attribute name="remark-internal">DIP protein P07603 original sequence version: 116</attribute>
          <attribute name="crc64">2F4F7A4304ECD47B</attribute>
        </attributeList>
      </interactor>
    </interactorList>
    <interactionList>
      <interaction id="4" imexId="IM-23722-1">
        <names>
          <shortLabel>hyda-hydb-3</shortLabel>
        </names>
        <xref>
          <primaryRef db="dip" dbAc="MI:0465" id="DIP-11037E" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="intact" dbAc="MI:0469" id="EBI-15488742" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="psi-mi" dbAc="MI:0488" id="MI:0465" refType="imex source"/>
          <secondaryRef db="imex" dbAc="MI:0670" id="IM-23722-1" refType="imex-primary" refTypeAc="MI:0662"/>
        </xref>
        <experimentList>
          <experimentRef>1</experimentRef>
        </experimentList>
        <participantList>
          <participant id="5">
            <interactorRef>3</interactorRef>
            <biologicalRole>
              <names>
                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
              </names>
              <xref>
                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
                <secondaryRef db="intact" dbAc="MI:0469" id="EBI-77781" refType="identity" refTypeAc="MI:0356"/>
                <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
              </xref>
            </biologicalRole>
            <experimentalRoleList>
              <experimentalRole>
                <names>
                  <shortLabel>unspecified role</shortLabel>
                  <fullName>unspecified role</fullName>
                </names>
                <xref>
                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="intact" dbAc="MI:0469" id="EBI-1383079" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                </xref>
              </experimentalRole>
            </experimentalRoleList>
            <hostOrganismList>
              <hostOrganism ncbiTaxId="882">
                <names>
                  <shortLabel>desvh</shortLabel>
                  <fullName>Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303)</fullName>
                </names>
              </hostOrganism>
            </hostOrganismList>
          </participant>
          <participant id="6">
            <interactorRef>2</interactorRef>
            <biologicalRole>
              <names>
                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
              </names>
              <xref>
                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
                <secondaryRef db="intact" dbAc="MI:0469" id="EBI-77781" refType="identity" refTypeAc="MI:0356"/>
                <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
              </xref>
            </biologicalRole>
            <experimentalRoleList>
              <experimentalRole>
                <names>
                  <shortLabel>unspecified role</shortLabel>
                  <fullName>unspecified role</fullName>
                </names>
                <xref>
                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="intact" dbAc="MI:0469" id="EBI-1383079" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                </xref>
              </experimentalRole>
            </experimentalRoleList>
            <hostOrganismList>
              <hostOrganism ncbiTaxId="882">
                <names>
                  <shortLabel>desvh</shortLabel>
                  <fullName>Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303)</fullName>
                </names>
              </hostOrganism>
            </hostOrganismList>
          </participant>
        </participantList>
        <interactionType>
          <names>
            <shortLabel>direct interaction</shortLabel>
            <fullName>direct interaction</fullName>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0407" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-608833" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
          </xref>
        </interactionType>
      </interaction>
    </interactionList>
  </entry>
</entrySet>