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  <entry>
    <source releaseDate="2022-02-03">
      <names>
        <shortLabel>MINT</shortLabel>
        <fullName>MINT, Dpt of Biology, University of Rome Tor Vergata</fullName>
        <alias type="synonym" typeAc="MI:1041">MINT</alias>
      </names>
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      <attributeList>
        <attribute name="url" nameAc="MI:0614">http://mint.bio.uniroma2.it/mint</attribute>
        <attribute name="url" nameAc="MI:0614">url&amp;gt;http://mint.bio.uniroma2.it/mint/</attribute>
        <attribute name="url" nameAc="MI:0614">https://mint.bio.uniroma2.it</attribute>
        <attribute name="id-validation-regexp" nameAc="MI:0628">MINT-[0-9]+</attribute>
        <attribute name="search-url" nameAc="MI:0615">https://mint.bio.uniroma2.it/index.php/results-interactions/?id=${ac}</attribute>
        <attribute name="definition">The Molecular INTeraction database (MINT) is a relational database designed to store interactions between biological molecules.</attribute>
        <attribute name="url" nameAc="MI:0614">http://mint.bio.uniroma2.it</attribute>
      </attributeList>
    </source>
    <experimentList>
      <experimentDescription id="1">
        <names>
          <fullName>The interaction network of rhodopsin involving the heterotrimeric G protein transducin and the monomeric GTPase Rac1 is determined by distinct binding processes.</fullName>
        </names>
        <bibref>
          <xref>
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          <attributeList>
            <attribute name="publication title" nameAc="MI:1091">The interaction network of rhodopsin involving the heterotrimeric G protein transducin and the monomeric GTPase Rac1 is determined by distinct binding processes.</attribute>
            <attribute name="journal" nameAc="MI:0885">FEBS J. (1742-464X)</attribute>
            <attribute name="publication year" nameAc="MI:0886">2014</attribute>
            <attribute name="curation depth" nameAc="MI:0955">imex curation</attribute>
            <attribute name="imex curation" nameAc="MI:0959"/>
            <attribute name="author-list" nameAc="MI:0636">Köster M., Dell Orco D., Koch K.W.</attribute>
            <attribute name="contact-email" nameAc="MI:0634">karl.w.koch@uni-oldenburg.de</attribute>
            <attribute name="author-announcement">20-Oct-2014: Contacted by IntAct-Help.</attribute>
            <attribute name="full coverage" nameAc="MI:0957">Only protein-protein interactions</attribute>
            <attribute name="imex curation" nameAc="MI:0959"/>
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        </bibref>
        <xref>
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        <hostOrganismList>
          <hostOrganism ncbiTaxId="-1">
            <names>
              <shortLabel>in vitro</shortLabel>
              <fullName>In vitro</fullName>
            </names>
          </hostOrganism>
        </hostOrganismList>
        <interactionDetectionMethod>
          <names>
            <shortLabel>spr</shortLabel>
            <fullName>surface plasmon resonance</fullName>
            <alias type="go synonym" typeAc="MI:0303">Optical biosensor</alias>
            <alias type="go synonym" typeAc="MI:0303">BIAcore(r)</alias>
            <alias type="synonym" typeAc="MI:1041">BIAcore(r)</alias>
            <alias type="synonym" typeAc="MI:1041">Optical biosensor</alias>
            <alias type="synonym" typeAc="MI:1041">spr</alias>
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        </interactionDetectionMethod>
        <participantIdentificationMethod>
          <names>
            <shortLabel>predetermined</shortLabel>
            <fullName>predetermined participant</fullName>
            <alias type="synonym" typeAc="MI:1041">predetermined</alias>
          </names>
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        </participantIdentificationMethod>
        <attributeList>
          <attribute name="contact-email" nameAc="MI:0634">karl.w.koch@uni-oldenburg.de</attribute>
          <attribute name="accepted">Accepted 2014-SEP-22 by LUANA</attribute>
          <attribute name="publication year" nameAc="MI:0886">2014</attribute>
          <attribute name="curation depth" nameAc="MI:0955">imex curation</attribute>
        </attributeList>
      </experimentDescription>
    </experimentList>
    <interactorList>
      <interactor id="2">
        <names>
          <shortLabel>opsd_bovin</shortLabel>
          <fullName>Rhodopsin</fullName>
          <alias type="gene name" typeAc="MI:0301">RHO</alias>
        </names>
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        <interactorType>
          <names>
            <shortLabel>protein</shortLabel>
            <fullName>protein</fullName>
          </names>
          <xref>
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        </interactorType>
        <organism ncbiTaxId="9913">
          <names>
            <shortLabel>bovin</shortLabel>
            <fullName>Bos taurus (Bovine)</fullName>
            <alias type="synonym" typeAc="MI:1041">Bovine</alias>
          </names>
        </organism>
        <sequence>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</sequence>
        <attributeList>
          <attribute name="remark-internal">DIP protein P02699 original sequence version: 157</attribute>
          <attribute name="remark-internal">DIP protein P02699 original sequence version: 158</attribute>
          <attribute name="remark-internal">DIP protein P02699 original sequence version: 88</attribute>
          <attribute name="remark-internal">DIP protein P02699 original sequence version: 160</attribute>
          <attribute name="remark-internal">DIP protein P02699 original sequence version: 152</attribute>
          <attribute name="remark-internal">DIP protein P02699 original sequence version: 136</attribute>
          <attribute name="remark-internal">DIP protein P02699 original sequence version: 135</attribute>
          <attribute name="remark-internal">DIP protein P02699 original sequence version: 141</attribute>
          <attribute name="comment" nameAc="MI:0612">mint</attribute>
          <attribute name="function" nameAc="MI:0613">Photoreceptor required for image-forming vision at low light intensity. Required for photoreceptor cell viability after birth. Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change leading to G-protein activation and release of all-trans retinal</attribute>
          <attribute name="crc64">33FDA196803E81F3</attribute>
        </attributeList>
      </interactor>
      <interactor id="3">
        <names>
          <shortLabel>rac1_human</shortLabel>
          <fullName>Ras-related C3 botulinum toxin substrate 1</fullName>
          <alias type="gene name" typeAc="MI:0301">RAC1</alias>
          <alias type="orf name" typeAc="MI:0306">MIG5</alias>
          <alias type="gene name synonym" typeAc="MI:0302">p21-Rac1</alias>
          <alias type="gene name synonym" typeAc="MI:0302">Ras-like protein TC25</alias>
          <alias type="gene name synonym" typeAc="MI:0302">Cell migration-inducing gene 5 protein</alias>
          <alias type="gene name synonym" typeAc="MI:0302">TC25</alias>
        </names>
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            <biologicalRole>
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                <fullName>unspecified role</fullName>
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            </biologicalRole>
            <experimentalRoleList>
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                  <fullName>bait</fullName>
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            </experimentalRoleList>
            <experimentalPreparationList>
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                  <fullName>purified</fullName>
                </names>
                <xref>
                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0350" refType="identity" refTypeAc="MI:0356"/>
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                </xref>
              </experimentalPreparation>
            </experimentalPreparationList>
          </participant>
          <participant id="6">
            <names>
              <alias type="author assigned name" typeAc="MI:0345">Rac1</alias>
            </names>
            <interactorRef>3</interactorRef>
            <participantIdentificationMethodList>
              <participantIdentificationMethod>
                <names>
                  <shortLabel>predetermined</shortLabel>
                  <fullName>predetermined participant</fullName>
                  <alias type="synonym" typeAc="MI:1041">predetermined</alias>
                </names>
                <xref>
                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0396" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="intact" dbAc="MI:0469" id="EBI-1465" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                </xref>
              </participantIdentificationMethod>
              <participantIdentificationMethod>
                <names>
                  <shortLabel>predetermined</shortLabel>
                  <fullName>predetermined participant</fullName>
                  <alias type="synonym" typeAc="MI:1041">predetermined</alias>
                </names>
                <xref>
                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0396" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="intact" dbAc="MI:0469" id="EBI-1465" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                </xref>
              </participantIdentificationMethod>
            </participantIdentificationMethodList>
            <biologicalRole>
              <names>
                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
              </names>
              <xref>
                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
                <secondaryRef db="intact" dbAc="MI:0469" id="EBI-77781" refType="identity" refTypeAc="MI:0356"/>
                <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
              </xref>
            </biologicalRole>
            <experimentalRoleList>
              <experimentalRole>
                <names>
                  <shortLabel>prey</shortLabel>
                  <fullName>prey</fullName>
                </names>
                <xref>
                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0498" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="intact" dbAc="MI:0469" id="EBI-58" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                </xref>
              </experimentalRole>
            </experimentalRoleList>
            <experimentalPreparationList>
              <experimentalPreparation>
                <names>
                  <shortLabel>purified</shortLabel>
                  <fullName>purified</fullName>
                </names>
                <xref>
                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0350" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="intact" dbAc="MI:0469" id="EBI-1537811" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                </xref>
              </experimentalPreparation>
            </experimentalPreparationList>
          </participant>
        </participantList>
        <interactionType>
          <names>
            <shortLabel>direct interaction</shortLabel>
            <fullName>direct interaction</fullName>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0407" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-608833" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
          </xref>
        </interactionType>
        <attributeList>
          <attribute name="figure legend" nameAc="MI:0599">f3</attribute>
          <attribute name="comment" nameAc="MI:0612">Rac1 bound to immobilized rhodopsin in a&#xd;
concentration dependent manner (Figure 3A).</attribute>
          <attribute name="comment" nameAc="MI:0612">The binding process was not triggered by light, since Rac1 bound to dark-adapted rhodopsin&#xd;
in a similar manner as to light-activated rhodopsin and binding of Rac1 to rhodopsin was not&#xd;
reversed by adding GTPγS (Figure 3B), which can be used to rapidly dissociate Gt from&#xd;
rhodopsin that is immobilized on a sensor chip surface</attribute>
          <attribute name="comment" nameAc="MI:0612">Further, the amount of Rac1 interacting with rhodopsin was not increased by illumination as&#xd;
can be seen in Figure 3C, where rhodopsin was bleached after Rac1 was injected into the flow&#xd;
cell and the sensorgram was compared with a recording done in darkness</attribute>
        </attributeList>
      </interaction>
    </interactionList>
  </entry>
</entrySet>