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  <entry>
    <source releaseDate="2022-02-04">
      <names>
        <shortLabel>UniProt</shortLabel>
        <fullName>UniProt</fullName>
      </names>
      <xref>
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      </xref>
      <attributeList>
        <attribute name="url" nameAc="MI:0614">http://www.uniprot.org</attribute>
      </attributeList>
    </source>
    <experimentList>
      <experimentDescription id="1">
        <names>
          <fullName>Arabidopsis VPS35, a retromer component, is required for vacuolar protein sorting and involved in plant growth and leaf senescence.</fullName>
        </names>
        <bibref>
          <xref>
            <primaryRef db="pubmed" dbAc="MI:0446" id="18222962" refType="primary-reference" refTypeAc="MI:0358"/>
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          </xref>
          <attributeList>
            <attribute name="publication title" nameAc="MI:1091">Arabidopsis VPS35, a retromer component, is required for vacuolar protein sorting and involved in plant growth and leaf senescence.</attribute>
            <attribute name="journal" nameAc="MI:0885">Plant Cell Physiol. (0032-0781)</attribute>
            <attribute name="publication year" nameAc="MI:0886">2008</attribute>
            <attribute name="curation depth" nameAc="MI:0955">imex curation</attribute>
            <attribute name="imex curation" nameAc="MI:0959"/>
            <attribute name="author-list" nameAc="MI:0636">Yamazaki M., Shimada T., Takahashi H., Tamura K., Kondo M., Nishimura M., Hara-Nishimura I.</attribute>
            <attribute name="contact-email" nameAc="MI:0634">ihnishi@gr.bot.kyoto-u.ac.jp</attribute>
            <attribute name="author-announcement">21-Dec-2011: Contacted by JYOTI.</attribute>
            <attribute name="full coverage" nameAc="MI:0957">Only protein-protein interactions</attribute>
            <attribute name="imex curation" nameAc="MI:0959"/>
          </attributeList>
        </bibref>
        <xref>
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        </xref>
        <hostOrganismList>
          <hostOrganism ncbiTaxId="3702">
            <names>
              <shortLabel>arath</shortLabel>
              <fullName>Arabidopsis thaliana (Mouse-ear cress)</fullName>
              <alias type="synonym" typeAc="MI:1041">Mouse-ear cress</alias>
            </names>
          </hostOrganism>
        </hostOrganismList>
        <interactionDetectionMethod>
          <names>
            <shortLabel>anti bait coip</shortLabel>
            <fullName>anti bait coimmunoprecipitation</fullName>
            <alias type="synonym" typeAc="MI:1041">anti bait coip</alias>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0006" refType="identity" refTypeAc="MI:0356"/>
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          </xref>
        </interactionDetectionMethod>
        <participantIdentificationMethod>
          <names>
            <shortLabel>western blot</shortLabel>
            <fullName>western blot</fullName>
            <alias type="go synonym" typeAc="MI:0303">Immuno blot</alias>
            <alias type="synonym" typeAc="MI:1041">Immuno blot</alias>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0113" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-973" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
          </xref>
        </participantIdentificationMethod>
        <attributeList>
          <attribute name="author-list" nameAc="MI:0636">Yamazaki M., Shimada T., Takahashi H., Tamura K., Kondo M., Nishimura M., Hara-Nishimura I.</attribute>
          <attribute name="contact-email" nameAc="MI:0634">ihnishi@gr.bot.kyoto-u.ac.jp</attribute>
          <attribute name="accepted">Accepted 2011-NOV-10 by ORCHARD</attribute>
          <attribute name="journal" nameAc="MI:0885">Plant Cell Physiol. (0032-0781)</attribute>
          <attribute name="publication year" nameAc="MI:0886">2008</attribute>
          <attribute name="full coverage" nameAc="MI:0957">Only protein-protein interactions</attribute>
          <attribute name="imex curation" nameAc="MI:0959"/>
          <attribute name="curation depth" nameAc="MI:0955">imex curation</attribute>
        </attributeList>
      </experimentDescription>
    </experimentList>
    <interactorList>
      <interactor id="2">
        <names>
          <shortLabel>vps29_arath</shortLabel>
          <fullName>Vacuolar protein sorting-associated protein 29</fullName>
          <alias type="gene name" typeAc="MI:0301">VPS29</alias>
          <alias type="gene name synonym" typeAc="MI:0302">MAG1</alias>
          <alias type="gene name synonym" typeAc="MI:0302">Protein MAIGO 1</alias>
          <alias type="gene name synonym" typeAc="MI:0302">Vesicle protein sorting 29</alias>
          <alias type="orf name" typeAc="MI:0306">T23J7.140</alias>
          <alias type="locus name" typeAc="MI:0305">At3g47810</alias>
        </names>
        <xref>
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          <secondaryRef db="uniprotkb" dbAc="MI:0486" id="Q3EAN1" version="TrEMBL_37" refType="secondary-ac" refTypeAc="MI:0360"/>
          <secondaryRef db="ensemblplants" id="AT3G47810.1" version="SP_122" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="ensemblplants" id="AT3G47810.2" version="SP_122" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="ensemblplants" id="AT3G47810.3" version="SP_122" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="intact" dbAc="MI:0469" id="EBI-1542970" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="refseq" dbAc="MI:0481" id="NP_190365.3"/>
          <secondaryRef db="refseq" dbAc="MI:0481" id="NP_974399.2"/>
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          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR028661"/>
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          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005771" version="SP_122"/>
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          <secondaryRef db="go" dbAc="MI:0448" id="GO:0006623" version="SP_122"/>
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          <secondaryRef db="go" dbAc="MI:0448" id="GO:0043231" version="SP_122"/>
        </xref>
        <interactorType>
          <names>
            <shortLabel>protein</shortLabel>
            <fullName>protein</fullName>
          </names>
          <xref>
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          </xref>
        </interactorType>
        <organism ncbiTaxId="3702">
          <names>
            <shortLabel>arath</shortLabel>
            <fullName>Arabidopsis thaliana (Mouse-ear cress)</fullName>
            <alias type="synonym" typeAc="MI:1041">Mouse-ear cress</alias>
          </names>
        </organism>
        <sequence>MVLVLALGDLHVPHRAADLPPKFKSMLVPGKIQHIICTGNLCIKEIHDYLKTICPDLHIVRGEFDEDARYPENKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLGVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSINQDVNPSFVLMDIDGFRAVVYVYELIDGEVKVDKIEFKKPPTTSSGP</sequence>
        <attributeList>
          <attribute name="crc64">C749EB2FE34095E5</attribute>
        </attributeList>
      </interactor>
      <interactor id="3">
        <names>
          <shortLabel>vp35b_arath</shortLabel>
          <fullName>Vacuolar protein sorting-associated protein 35B</fullName>
          <alias type="gene name" typeAc="MI:0301">VPS35B</alias>
          <alias type="gene name synonym" typeAc="MI:0302">Vesicle protein sorting 35B</alias>
          <alias type="orf name" typeAc="MI:0306">T4O12.9</alias>
          <alias type="locus name" typeAc="MI:0305">At1g75850</alias>
        </names>
        <xref>
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          <secondaryRef db="uniprotkb" dbAc="MI:0486" id="Q9LQS9" version="SP_6" refType="secondary-ac" refTypeAc="MI:0360"/>
          <secondaryRef db="ensemblplants" id="AT1G75850.1" version="SP_62" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="intact" dbAc="MI:0469" id="EBI-5241921" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="refseq" dbAc="MI:0481" id="NP_177713.3"/>
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        <interactorType>
          <names>
            <shortLabel>protein</shortLabel>
            <fullName>protein</fullName>
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          <xref>
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        </interactorType>
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          <names>
            <shortLabel>arath</shortLabel>
            <fullName>Arabidopsis thaliana (Mouse-ear cress)</fullName>
            <alias type="synonym" typeAc="MI:1041">Mouse-ear cress</alias>
          </names>
        </organism>
        <sequence>MRTLAGVEDEDKWLAEGIAGIQHNAFFMHRALDANNLREVLKYSALMLSELRTSKLSPQKYYDLYMRAFDQLRQLEIFFKDESRHGLPVVDLYELVQHAGNILPRMYLLCTVGSVYIKSKQAPSKDVLKDLVEMCRGVQHPIRGLFLRSYLAQVSRDKLPEIGSDYEGDANTVMDAVEFVLQNFTEMNKLWVRIQHQGPGTVREKQEKERNELRDLVGKNLHVLGQIEGVDLEMYKETVLPRVLEQVVNCKDKLAQYYLMECIIQVFPDEYHLQTLETLLAACTQLMPTVDTKIVLTQLMDRLSNYAASSPDVLHEFLQVEAFAKLSNAIGKVIDTQLEMPIVGAMTLFVSLLTFTLRVHPDRLDYVDQVLGACVVKLSSVPKLEDARAMKQVVALLSAPLEKYSDIVTALTLSNYPRVMDHLDDGTNKVMAMLIIQSIMKTDSCISTADKVEVLFELIKGLIKDLDETNAEELDEEDFQEEQNSVARLIHMLDNEEPEEMLKIICVVRRHLMTGGPRRLPFTVPPLVFSAVRLVRQLESQGGDIAGEDSATPRKIFQILNQTIEVLTSVPCPELALRLYLQCAEAASDCDLEPVAYEFFTQAFMLYEEEIADSKAQVTAIHLIVGTLQRINVFGVENRDTLTHKATGYSARLLKKPDQCRAVYACSHLFWVDDPDGIKDGERVLLCLRRALRIANAAQQMASATRGSSGPVTLFVEILNKYIYFFEKGNPHITPSDIQSLIELINNEMQSDNGNTTIHSDPFFTSTLRYIKFIKQKGGLMGEKYDPIKL</sequence>
        <attributeList>
          <attribute name="crc64">F1C9F282C120AD20</attribute>
        </attributeList>
      </interactor>
    </interactorList>
    <interactionList>
      <interaction id="4" imexId="IM-16973-1">
        <names>
          <shortLabel>vps35b-t23j7_140</shortLabel>
        </names>
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        <experimentList>
          <experimentRef>1</experimentRef>
        </experimentList>
        <participantList>
          <participant id="5">
            <interactorRef>3</interactorRef>
            <biologicalRole>
              <names>
                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
              </names>
              <xref>
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            </biologicalRole>
            <experimentalRoleList>
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                <names>
                  <shortLabel>bait</shortLabel>
                  <fullName>bait</fullName>
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                </xref>
              </experimentalRole>
            </experimentalRoleList>
          </participant>
          <participant id="6">
            <interactorRef>2</interactorRef>
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              <names>
                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
              </names>
              <xref>
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            </biologicalRole>
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                <names>
                  <shortLabel>prey</shortLabel>
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            </experimentalRoleList>
          </participant>
        </participantList>
        <interactionType>
          <names>
            <shortLabel>physical association</shortLabel>
            <fullName>physical association</fullName>
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        </interactionType>
        <attributeList>
          <attribute name="figure legend" nameAc="MI:0599">Fig. 4</attribute>
        </attributeList>
      </interaction>
    </interactionList>
  </entry>
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