IntAct European Bioinformatics Institute IntAct intact http://www.ebi.ac.uk/ http://www.ebi.ac.uk/intact/query/${ac} EBI-[0-9]+|IA:[0-9]+ INTerAction database (IntAct) provides an open source database and toolkit for the storage, presentation and analysis of molecular interactions. http://www.ebi.ac.uk/intact European Bioinformatics Institute; Wellcome Trust Genome Campus; Hinxton, Cambridge; CB10 1SD; United Kingdom http://www.ebi.ac.uk/intact/ Promiscuous substrate recognition in folding and assembly activities of the trigger factor chaperone. Promiscuous substrate recognition in folding and assembly activities of the trigger factor chaperone. Cell (0092-8674) 2009 imex curation Martinez-Hackert E., Hendrickson WA. Complexes purified from cytosolic lysates. wayne@convex.hhmi.columbia.edu 23-Feb-2010: Contacted by JYOTI. jyoti Only protein-protein interactions 8 ecoli Escherichia coli (strain K12) pull down pull down de novo protein sequence de novo protein sequencing by mass spectrometry de novo protein sequence Martinez-Hackert E., Hendrickson WA. Complexes purified from cytosolic lysates. wayne@convex.hhmi.columbia.edu Accepted 2009-DEC-10 by JYOTI. 23-Feb-2010: Contacted by JYOTI. Cell (0092-8674) 2009 jyoti Only protein-protein interactions 8 imex curation Promiscuous substrate recognition in folding and assembly activities of the trigger factor chaperone. Promiscuous substrate recognition in folding and assembly activities of the trigger factor chaperone. Cell (0092-8674) 2009 imex curation Martinez-Hackert E., Hendrickson WA. Complexes purified from cytosolic lysates. wayne@convex.hhmi.columbia.edu 23-Feb-2010: Contacted by JYOTI. jyoti Only protein-protein interactions 8 in vitro In vitro comig non denat gel comigration in non denaturing gel electrophoresis comig non denat gel weight by staining molecular weight estimation by staining weight by staining Martinez-Hackert E., Hendrickson WA. Complexes purified from cytosolic lysates. wayne@convex.hhmi.columbia.edu Accepted 2009-DEC-10 by JYOTI. 23-Feb-2010: Contacted by JYOTI. Cell (0092-8674) 2009 jyoti Only protein-protein interactions 8 imex curation Promiscuous substrate recognition in folding and assembly activities of the trigger factor chaperone. Promiscuous substrate recognition in folding and assembly activities of the trigger factor chaperone. Cell (0092-8674) 2009 imex curation Martinez-Hackert E., Hendrickson WA. Complexes purified from cytosolic lysates. wayne@convex.hhmi.columbia.edu 23-Feb-2010: Contacted by JYOTI. jyoti Only protein-protein interactions 8 in vitro In vitro spr surface plasmon resonance Optical biosensor BIAcore(r) BIAcore(r) Optical biosensor spr predetermined predetermined participant predetermined Martinez-Hackert E., Hendrickson WA. Complexes purified from cytosolic lysates. wayne@convex.hhmi.columbia.edu Accepted 2009-DEC-10 by JYOTI. 23-Feb-2010: Contacted by JYOTI. Cell (0092-8674) 2009 jyoti Only protein-protein interactions 8 imex curation Promiscuous substrate recognition in folding and assembly activities of the trigger factor chaperone. Promiscuous substrate recognition in folding and assembly activities of the trigger factor chaperone. Cell (0092-8674) 2009 imex curation Martinez-Hackert E., Hendrickson WA. Complexes purified from cytosolic lysates. wayne@convex.hhmi.columbia.edu 23-Feb-2010: Contacted by JYOTI. jyoti Only protein-protein interactions 8 in vitro In vitro crosslink cross-linking study crosslink predetermined predetermined participant predetermined Martinez-Hackert E., Hendrickson WA. Complexes purified from cytosolic lysates. wayne@convex.hhmi.columbia.edu Accepted 2009-DEC-10 by JYOTI. 23-Feb-2010: Contacted by JYOTI. Cell (0092-8674) 2009 jyoti Only protein-protein interactions 8 imex curation Promiscuous substrate recognition in folding and assembly activities of the trigger factor chaperone. Promiscuous substrate recognition in folding and assembly activities of the trigger factor chaperone. Cell (0092-8674) 2009 imex curation Martinez-Hackert E., Hendrickson WA. Complexes purified from cytosolic lysates. wayne@convex.hhmi.columbia.edu 23-Feb-2010: Contacted by JYOTI. jyoti Only protein-protein interactions 8 in vitro In vitro solution sedimentati cosedimentation in solution solution sedimentati predetermined predetermined participant predetermined Martinez-Hackert E., Hendrickson WA. Complexes purified from cytosolic lysates. wayne@convex.hhmi.columbia.edu Accepted 2009-DEC-10 by JYOTI. 23-Feb-2010: Contacted by JYOTI. Cell (0092-8674) 2009 jyoti Only protein-protein interactions 8 imex curation Promiscuous substrate recognition in folding and assembly activities of the trigger factor chaperone. Promiscuous substrate recognition in folding and assembly activities of the trigger factor chaperone. Cell (0092-8674) 2009 imex curation Martinez-Hackert E., Hendrickson WA. Complexes purified from cytosolic lysates. wayne@convex.hhmi.columbia.edu 23-Feb-2010: Contacted by JYOTI. jyoti Only protein-protein interactions 8 in vitro In vitro x-ray diffraction x-ray crystallography X-ray X-ray x-ray diffraction predetermined predetermined participant predetermined Martinez-Hackert E., Hendrickson WA. Complexes purified from cytosolic lysates. wayne@convex.hhmi.columbia.edu Accepted 2009-DEC-10 by JYOTI. 23-Feb-2010: Contacted by JYOTI. Cell (0092-8674) 2009 jyoti Only protein-protein interactions 8 imex curation rl16_ecoli 50S ribosomal protein L16 rplP Large ribosomal subunit protein uL16 JW3275 b3313 protein protein ecoli Escherichia coli (strain K12) MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM DIP protein P0ADY7 original sequence version: 44 445A9B167F7564D1 his7_ecoli Histidine biosynthesis bifunctional protein HisB hisB b2022 JW2004 protein protein ecoli Escherichia coli (strain K12) MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGITGLRYDRETLNWPMIGEQLTRRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALGEALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL 5EC09FB68AE40A9D rnc_ecoli Ribonuclease 3 Ribonuclease III rnc b2567 JW2551 protein protein ecoli Escherichia coli (strain K12) MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE D9E2858F2E0AA3A5 D9E2858F2E0AA3A5 kith_ecoli Thymidine kinase tdk b1238 JW1226 protein protein ecoli Escherichia coli (strain K12) MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPAKLFNQNSSLFDEIRAEHEQQAIHCVLVDECQFLTRQQVYELSEVVDQLDIPVLCYGLRTDFRGELFIGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQAGRPYNEGEQVVIGGNERYVSVCRKHYKEALQVDSLTAIQERHRHD 533166D9EAD20E16 ompa_ecoli Outer membrane protein A ompA tolG tut con Outer membrane protein II* b0957 JW0940 Outer membrane porin A Outer membrane protein 3A Outer membrane protein B Outer membrane protein d protein protein ecoli Escherichia coli (strain K12) MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTNNIGDAHTIGTRPDNGMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIKDVVTQPQA DIP protein P0A910 original sequence version: 81 DIP protein P0A910 original sequence version: 79 DIP protein P0A910 original sequence version: 61 DIP protein P0A910 original sequence version: 54 DIP protein P0A910 original sequence version: 67 DIP protein P0A910 original sequence version: 88 DIP protein P0A910 original sequence version: 93 195147734CDF8B04 glda_ecoli Glycerol dehydrogenase gldA b3945 JW5556 protein protein ecoli Escherichia coli (strain K12) MDRIIQSPGKYIQGADVINRLGEYLKPLAERWLVVGDKFVLGFAQSTVEKSFKDAGLVVEIAPFGGECSQNEIDRLRGIAETAQCGAILGIGGGKTLDTAKALAHFMGVPVAIAPTIASTDAPCSALSVIYTDEGEFDRYLLLPNNPNMVIVDTKIVAGAPARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAMLAAEQHVVTPALERVIEANTYLSGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVAFGTLTQLVLENAPVEEIETVAALSHAVGLPITLAQLDIKEDVPAKMRIVAEAACAEGETIHNMPGGATPDQVYAALLVADQYGQRFLQEWE F6F3F275B4091F28 rs14_ecoli 30S ribosomal protein S14 rpsN Small ribosomal subunit protein uS14 JW3269 b3307 protein protein ecoli Escherichia coli (strain K12) MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNAVLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW DIP protein P0AG59 original sequence version: 48 E2B21D9D3752352C pdxh_ecoli Pyridoxine/pyridoxamine 5'-phosphate oxidase PNP/PMP oxidase Pyridoxal 5'-phosphate synthase pdxH b1638 JW1630 protein protein ecoli Escherichia coli (strain K12) MSDNDELQQIAHLRREYTKGGLRRRDLPADPLTLFERWLSQACEAKLADPTAMVVATVDEHGQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLLFPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQGEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP DIP protein P0AFI7 original sequence version: 87 8B47CEEEA6CEF5F9 uvra_ecoli UvrABC system protein A uvrA dinE b4058 Excinuclease ABC subunit A JW4019 protein protein ecoli Escherichia coli (strain K12) MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML DIP protein P0A698 original sequence version: 81 DIP protein P0A698 original sequence version: 82 DIP protein P0A698 original sequence version: 41 DIP protein P0A698 original sequence version: null D61AAEB6514B860C yfif_ecoli Uncharacterized tRNA/rRNA methyltransferase YfiF yfiF b2581 JW2565 protein protein ecoli Escherichia coli (strain K12) MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA DIP protein P0AGJ5 original sequence version: 37 9845E9884D8369BF rl10_ecoli 50S ribosomal protein L10 rplJ 50S ribosomal protein L8 Large ribosomal subunit protein uL10 JW3948 b3985 protein protein ecoli Escherichia coli (strain K12) MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGVYMRVVRNTLLRRAVEGTPFECLKDAFVGPTLIAYSMEHPGAAARLFKEFAKANAKFEVKAAAFEGELIPASQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRDAKEAA DIP protein P0A7J3 original sequence version: 44 F15822B0EDB6AC02 rl6_ecoli 50S ribosomal protein L6 rplF Large ribosomal subunit protein uL6 JW3267 b3305 protein protein ecoli Escherichia coli (strain K12) MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGKGVRYADEVVRTKEAKKK DIP protein P0AG55 original sequence version: 48 946B64E9FA42FE61 nuoe_ecoli NADH-quinone oxidoreductase subunit E nuoE b2285 JW2280 NADH dehydrogenase I subunit E NDH-1 subunit E NUO5 protein protein ecoli Escherichia coli (strain K12) MHENQQPQTEAFELSAAEREAIEHEMHHYEDPRAASIEALKIVQKQRGWVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGYQGIQAALEKKLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPELLERYK A1EA95085B9B9107 rs11_ecoli 30S ribosomal protein S11 rpsK Small ribosomal subunit protein uS11 JW3259 b3297 protein protein ecoli Escherichia coli (strain K12) MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV DIP protein P0A7R9 original sequence version: 55 DIP protein P0A7R9 original sequence version: 66 0C759DDA60E89C0C rl14_ecoli 50S ribosomal protein L14 rplN Large ribosomal subunit protein uL14 JW3272 b3310 protein protein ecoli Escherichia coli (strain K12) MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEVL DIP protein P0ADY3 original sequence version: 46 192ACB1623979510 rs1_ecoli 30S ribosomal protein S1 rpsA ssyF b0911 JW0894 Bacteriophage Q beta RNA-directed RNA polymerase subunit I Small ribosomal subunit protein bS1 protein protein ecoli Escherichia coli (strain K12) MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE DIP protein P0AG67 original sequence version: 46 0ABCDEB9E510C267 maa_ecoli Maltose O-acetyltransferase ylaD Maltose transacetylase maa b0459 JW0448 protein protein ecoli Escherichia coli (strain K12) MSTEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHTLRQQILADLFGQVTEAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARIIKKL DIP protein P77791 original sequence version: 79 DIP protein P77791 original sequence version: null 3E4C7A4D68AA49C4 cbpa_ecoli Curved DNA-binding protein cbpA b1000 JW0985 protein protein ecoli Escherichia coli (strain K12) MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA DIP protein P36659 original sequence version: null A3893D2BFDE75803 faba_ecoli 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase fabA Beta-hydroxydecanoyl thioester dehydrase 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA Trans-2-decenoyl-[acyl-carrier-protein] isomerase JW0937 b0954 protein protein ecoli Escherichia coli (strain K12) MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASDLKVGLFQDTSAF DFC508352D2DCF2C DFC508352D2DCF2C psts_ecoli Phosphate-binding protein PstS pstS phoS b3728 JW3706 protein protein ecoli Escherichia coli (strain K12) MKVMRTTVATVVAATLSMSAFSVFAEASLTGAGATFPAPVYAKWADTYQKETGNKVNYQGIGSSGGVKQIIANTVDFGASDAPLSDEKLAQEGLFQFPTVIGGVVLAVNIPGLKSGELVLDGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRRADGSGTSFVFTSYLAKVNEEWKNNVGTGSTVKWPIGLGGKGNDGIAAFVQRLPGAIGYVEYAYAKQNNLAYTKLISADGKPVSPTEENFANAAKGADWSKTFAQDLTNQKGEDAWPITSTTFILIHKDQKKPEQGTEVLKFFDWAYKTGAKQANDLDYASLPDSVVEQVRAAWKTNIKDSSGKPLY 867DA7199C2C87ED 867DA7199C2C87ED ptka_ecoli PTS system galactitol-specific EIIA component gatA EIIB-Gat Galactitol-specific phosphotransferase enzyme IIA component JW2078/JW2081 b2094 protein protein ecoli Escherichia coli (strain K12) MTNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTWPQALIAREAEFPTGIMLEQHAIAIPHCEAIHAKSSAIYLLRPTNKVHFQQADDDNDVAVSLVIALIVENPQQQLKLLRCLFGKLQQPDIVETLITLPETQLKEYFTKYVLDSDE This sequence has been withdrawn from Uniprot. 1A760676BE5FB61D 1A760676BE5FB61D rl17_ecoli 50S ribosomal protein L17 rplQ Large ribosomal subunit protein bL17 JW3256 b3294 protein protein ecoli Escherichia coli (strain K12) MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEKAEAAAE DIP protein P0AG44 original sequence version: 71 DIP protein P0AG44 original sequence version: 46 D96DF17C07013A11 mreb_ecoli Cell shape-determining protein MreB mreB envB rodY b3251 JW3220 Actin-like MreB protein Rod shape-determining protein MreB protein protein ecoli Escherichia coli (strain K12) MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNSFMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPVVVAEDPLTCVARGGGKALEMIDMHGGDLFSEE 1393696D8CDAEF93 1393696D8CDAEF93 tig_thema Trigger factor tig PPIase TM_0694 protein protein thema Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) MEVKELERDKNRVVLEYVFGAEEIAQAEDKAVRYLNQRVEIPGFRKGRIPKNVLKMKLGEEFQEYTLDFLMDLIPDTLKDRKLILSPIVTERELKDVTARVVVEVHEEPEVRIGDISKIEVEKVDEEKVLEKYVERRIEDLRESHALLEPKEGPAEAGDLVRVNMEVYNEEGKKLTSREYEYVISEDEDRPFVKDLVGKKKGDVVEIEREYEGKKYTYKLEVEEVYKRTLPEIGDELAKSVNNEFETLEQLKESLKKEGKEIYDVEMKESMREQLLEKLPEIVEIEISDRTLEILVNEAINRLKREGRYEQIVSSYESEEKFREELKERILDDIKRDRVIEVLAQEKGISVNDEELEKEAEELAPFWGISPDRAKSLVKARQDLREELRWAILKRKVLDLLLQEVKVKVVEPKGEGDDSEGKEDN BEC16F20ACFDD922 avta_ecoli Valine--pyruvate aminotransferase avtA Alanine--valine transaminase Transaminase C b3572 JW5652 protein protein ecoli Escherichia coli (strain K12) MTFSLFGDKFTRHSGITLLMEDLNDGLRTPGAIMLGGGNPAQIPEMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVIDNAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGIISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHKPEGAIFLWLWFKDLPITTKQLYQRLKARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYVPEPEKIEAGVKILAEEIERAWAESH 55A0CA53F0E697A2 rl2_ecoli 50S ribosomal protein L2 rplB Large ribosomal subunit protein uL2 JW3279 b3317 protein protein ecoli Escherichia coli (strain K12) MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRNNNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK DIP protein P60422 original sequence version: 81 1010BDE8D8C68B9B rs10_ecoli 30S ribosomal protein S10 rpsJ nusE b3321 JW3283 Small ribosomal subunit protein uS10 Transcription termination/antitermination protein NusE protein protein ecoli Escherichia coli (strain K12) MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG DIP protein P0A7R5 original sequence version: 51 DAEB35A2557F1D59 rs19_ecoli 30S ribosomal protein S19 rpsS Small ribosomal subunit protein uS19 JW3278 b3316 protein protein ecoli Escherichia coli (strain K12) MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK DIP protein P0A7U3 original sequence version: 55 439F951848E95CB8 rl4_ecoli 50S ribosomal protein L4 b3319 rplD eryA JW3281 Large ribosomal subunit protein uL4 protein protein ecoli Escherichia coli (strain K12) MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA DIP protein P60723 original sequence version: 78 3A953206B0F083B5 thga_ecoli Galactoside O-acetyltransferase Thiogalactoside acetyltransferase lacA Thiogalactoside transacetylase JW0333 b0342 Acetyl-CoA:galactoside 6-O-acetyltransferase protein protein ecoli Escherichia coli (strain K12) MNMPMTERIRAGKLFTDMCEGLPEKRLRGKTLMYEFNHSHPSEVEKRESLIKEMFATVGENAWVEPPVYFSYGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIREINDRDKHYYFKDYKVESSV 31C7FEA0B0150D70 rs9_ecoli 30S ribosomal protein S9 rpsI Small ribosomal subunit protein uS9 JW3199 b3230 protein protein ecoli Escherichia coli (strain K12) MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR DIP protein P0A7X3 original sequence version: 55 757D599168812806 rl1_ecoli 50S ribosomal protein L1 rplA Large ribosomal subunit protein uL1 JW3947 b3984 protein protein ecoli Escherichia coli (strain K12) MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTMGAGVAVDQAGLSASVN DIP protein P0A7L0 original sequence version: 52 DIP protein P0A7L0 original sequence version: 59 D751704B34748D53 rho_ecoli Transcription termination factor Rho rho nitA psuA rnsC sbaA tsu b3783 ATP-dependent helicase Rho JW3756 protein protein ecoli Escherichia coli (strain K12) MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMKRS DIP protein P0AG30 original sequence version: 58 DIP protein P0AG30 original sequence version: 53 5970A85334C43467 sdha_ecoli Succinate dehydrogenase flavoprotein subunit sdhA b0723 JW0713 protein protein ecoli Escherichia coli (strain K12) MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESMTRRSVNMEPKLRPAFPPKIRTY 837F9A63991B6CE8 rs3_ecoli 30S ribosomal protein S3 rpsC Small ribosomal subunit protein uS3 JW3276 b3314 protein protein ecoli Escherichia coli (strain K12) MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK DIP protein P0A7V3 original sequence version: 58 6D0131A285B7AAB3 rl7_ecoli 50S ribosomal protein L7/L12 rplL L8 Large ribosomal subunit protein bL12 JW3949 b3986 protein protein ecoli Escherichia coli (strain K12) MSITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAGPVEAAEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKALEEAGAEVEVK DIP protein P0A7K2 original sequence version: 54 08B051A0CDAA527E rl5_ecoli 50S ribosomal protein L5 rplE Large ribosomal subunit protein uL5 JW3270 b3308 protein protein ecoli Escherichia coli (strain K12) MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFRK DIP protein P62399 original sequence version: 68 B2E95A8BE4B8D2A7 rl13_ecoli 50S ribosomal protein L13 rplM Large ribosomal subunit protein uL13 JW3200 b3231 protein protein ecoli Escherichia coli (strain K12) MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI DIP protein P0AA10 original sequence version: 47 58B45EF9EB75FDCD glk_ecoli Glucokinase glk b2388 JW2385 Glucose kinase protein protein ecoli Escherichia coli (strain K12) MTKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAVIRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDITERALADSCTDCRRALSLFCVIMGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQTLGHIL 2D6CD956641A3823 argd_ecoli Acetylornithine/succinyldiaminopimelate aminotransferase argD dapC dtu b3359 JW3322 protein protein ecoli Escherichia coli (strain K12) MAIEQTAITRATFDEVILPIYAPAEFIPVKGQGSRIWDQQGKEYVDFAGGIAVTALGHCHPALVNALKTQGETLWHISNVFTNEPALRLGRKLIEATFAERVVFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVTAATPEFLQGLRELCDQHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPISAMLTTAEIASAFHPGSHGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSDIRGMGLLIGAELKPQYKGRARDFLYAGAEAGVMVLNAGPDVMRFAPSLVVEDADIDEGMQRFAHAVAKVVGA 645AA1EBCA442214 faby_ecoli Probable acyltransferase FabY fabY yiiD JW3859 b3888 protein protein ecoli Escherichia coli (strain K12) MSQLPGLSRETRESIAMYHLRVPQTEEELERYYQFRWEMLRKPLHQPKGSERDAWDAMAHHQMVVDEQGNLVAVGRLYINADNEASIRFMAVHPDVQDKGLGTLMAMTLESVARQEGVKRVTCSAREDAVEFFAKLGFVNQGEITTPTTTPIRHFLMIKPVATLDDILHRGDWCAQLQQAWYEHIPLSEKMGVRIQQYTGQKFITTMPETGNQNPHHTLFAGSLFSLATLTGWGLIWLMLRERHLGGTIILADAHIRYSKPISGKPHAVADLGALSGDLDRLARGRKARVQMQVEIFGDETPGAVFEGTYIVLPAKPFGPYEEGGNEEE This sequence has been withdrawn from Uniprot. 42411FE2B0D21175 42411FE2B0D21175 rl22_ecoli 50S ribosomal protein L22 rplV eryB b3315 JW3277 Large ribosomal subunit protein uL22 protein protein ecoli Escherichia coli (strain K12) METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR DIP protein P61175 original sequence version: 97 F0E0C6982772277C rs7_thema 30S ribosomal protein S7 rpsG TM_1504 protein protein thema Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) MRRRRAEKRQIPPDPVFGDVLVAKLINRVMWDGKKTIAQKIVYGAFDIIREKTKKDPLEVFRQAVENVKPVLEVRPRRVGGATYQVPIEVQEPRRTSLALRWIVEAARAKKGRPMKEKLAEEIIAAYNNTGTAIKKKEDTHRMAEANRAFAHYRW DB52CB3AF8F942E1 cra_ecoli Catabolite repressor/activator cra Fructose repressor fruC fruR shl JW0078 b0080 protein protein ecoli Escherichia coli (strain K12) MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVVGADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYANSYEREAAAQLFEKWLETHPMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDNELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS This sequence has been withdrawn from Uniprot. 503AE935CC2EC0C8 503AE935CC2EC0C8 rs2_ecoli 30S ribosomal protein S2 rpsB Small ribosomal subunit protein uS2 JW0164 b0169 protein protein ecoli Escherichia coli (strain K12) MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEAE DIP protein P0A7V0 original sequence version: null 87A38C696115212E rs7_ecoli 30S ribosomal protein S7 rpsG Small ribosomal subunit protein uS7 JW3303 b3341 protein protein ecoli Escherichia coli (strain K12) MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYSALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRWLSLRSFSHQAGASSKQPALGYLN DIP protein P02359 original sequence version: null 8627DB380C4A9C0D fpg_ecoli Formamidopyrimidine-DNA glycosylase mutM fpg b3635 JW3610 DNA-(apurinic or apyrimidinic site) lyase MutM protein protein ecoli Escherichia coli (strain K12) MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLSDQPVLSVQRRAKYLLLELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK 01826F7E0E4686EC ak1h_ecoli Bifunctional aspartokinase/homoserine dehydrogenase 1 thrA thrA1 thrA2 b0002 JW0001 Aspartokinase I/homoserine dehydrogenase I protein protein ecoli Escherichia coli (strain K12) MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKITNHLVAMIEKTISGQDALPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIKHVLHGISLLGQCPDSINAALICRGEKMSIAIMAGVLEARGHNVTVIDPVEKLLAVGHYLESTVDIAESTRRIAASRIPADHMVLMAGFTAGNEKGELVVLGRNGSDYSAAVLAACLRADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQFQIPCLIKNTGNPQAPGTLIGASRDEDELPVKGISNLNNMAMFSVSGPGMKGMVGMAARVFAAMSRARISVVLITQSSSEYSISFCVPQSDCVRAERAMQEEFYLELKEGLLEPLAVTERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATTGVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKALLTNVHGLNLENWQEELAQAKEPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYADFLREGFHVVTPNKKANTSSMDYYHQLRYAAEKSRRKFLYDTNVGAGLPVIENLQNLLNAGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARKLLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMANLSQLDDLFAARVAKARDEGKVLRYVGNIDEDGVCRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAGNDVTAAGVFADLLRTLSWKLGV DIP protein P00561 original sequence version: null 0BF28E9EECAB10ED ispd_ecoli 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ispD b2747 JW2717 ygbP 4-diphosphocytidyl-2C-methyl-D-erythritol synthase MEP cytidylyltransferase CDP-ME synthase protein protein ecoli Escherichia coli (strain K12) MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT 6AD26690AC2CF201 mbht_ecoli Hydrogenase-2 small chain yghV Membrane-bound hydrogenase 2 small subunit NiFe hydrogenase hybO b2997 JW2965 protein protein ecoli Escherichia coli (strain K12) MTGDNTLIHSHGINRRDFMKLCAALAATMGLSSKAAAEMAESVTNPQRPPVIWIGAQECTGCTESLLRATHPTVENLVLETISLEYHEVLSAAFGHQVEENKHNALEKYKGQYVLVVDGSIPLKDNGIYCMVAGEPIVDHIRKAAEGAAAIIAIGSCSAWGGVAAAGVNPTGAVSLQEVLPGKTVINIPGCPPNPHNFLATVAHIITYGKPPKLDDKNRPTFAYGRLIHEHCERRPHFDAGRFAKEFGDEGHREGWCLYHLGCKGPETYGNCSTLQFCDVGGVWPVAIGHPCYGCNEEGIGFHKGIHQLANVENQTPRSQKPDVNAKEGGNVSAGAIGLLGGVVGLVAGVSVMAVRELGRQQKKDNADSRGE C5821096BBAF9C66 C5821096BBAF9C66 tig_ecoli Trigger factor tig PPIase JW0426 b0436 protein protein ecoli Escherichia coli (strain K12) MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGEDFTYSVEFEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPRELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNKELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQA DIP protein P0A850 original sequence version: 54 42C3E3C335074164 trma_ecoli tRNA/tmRNA (uracil-C(5))-methyltransferase trmA tRNA(m5U54)-methyltransferase tRNA (uracil(54)-C(5))-methyltransferase tmRNA (uracil(341)-C(5))-methyltransferase JW3937 b3965 protein protein ecoli Escherichia coli (strain K12) MTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHYRMRAEFRIWHDGDDLYHIIFDQQTKSRIRVDSFPAASELINQLMTAMIAGVRNNPVLRHKLFQIDYLTTLSNQAVVSLLYHKKLDDEWRQEAEALRDALRAQNLNVHLIGRATKTKIELDQDYIDERLPVAGKEMIYRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPRILYISCNPETLCKNLETLSQTHKVERLALFDQFPYTHHMECGVLLTAK DIP protein P23003 original sequence version: null A7A65FD98380D27D carb_ecoli Carbamoyl-phosphate synthase large chain carB pyrA b0033 Carbamoyl-phosphate synthetase ammonia chain JW0031 protein protein ecoli Escherichia coli (strain K12) MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK DIP protein P00968 original sequence version: 118 DIP protein P00968 original sequence version: 143 DIP protein P00968 original sequence version: null A09D019CBDFF8D2B rl28_ecoli 50S ribosomal protein L28 rpmB Large ribosomal subunit protein bL28 JW3612 b3637 protein protein ecoli Escherichia coli (strain K12) MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKGIDTVLAELRARGEKY DIP protein P0A7M2 original sequence version: 49 2616ADB10772A57C gatz_ecoli D-tagatose-1,6-bisphosphate aldolase subunit GatZ gatZ b2095 JW2082 protein protein ecoli Escherichia coli (strain K12) MKTLIARHKAGEHIGICSVCSAHPLVIEAALAFDRNSTRKVLIEATSNQVNQFGGYTGMTPADFREFVFTIADKVGFARERIILGGDHLGPNCWQQENADAAMEKSVELVKEYVRAGFSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAESVATDCQREQLSYVIGTEVPVPGGEASAIQSVHITHVEDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIHYQPQEAQPLAQWIENTRMVYEAHSTDYQTRTAYWELVRDHFAILKVGPALTFALREAIFALAQIEQELIAPENRSGCLAVIEEVMLDEPQYWKKYYRTGFNDSLLDIRYSLSDRIRYYWPHSRIKNSVETMMVNLEGVDIPLGMISQYLPKQFERIQSGELSAIPHQLIMDKIYDVLRAYRYGCAE This sequence has been withdrawn from Uniprot. 258D25D832E42580 258D25D832E42580 rs21_ecoli 30S ribosomal protein S21 rpsU Small ribosomal subunit protein bS21 JW3037 b3065 protein protein ecoli Escherichia coli (strain K12) MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKLARENARRTRLY DIP protein P68679 original sequence version: 55 B2E8A18BFBB2F685 rs5_ecoli 30S ribosomal protein S5 rpsE spc b3303 JW3265 Small ribosomal subunit protein uS5 protein protein ecoli Escherichia coli (strain K12) MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSVEEILGK DIP protein P0A7W1 original sequence version: null 0B7EA2CB34018CAB rl3_ecoli 50S ribosomal protein L3 rplC Large ribosomal subunit protein uL3 JW3282 b3320 protein protein ecoli Escherichia coli (strain K12) MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAVKA DIP protein P60438 original sequence version: null EA8E10EDD2C0A8FD gatd_ecoli Galactitol 1-phosphate 5-dehydrogenase gatD b2091 JW2075 protein protein ecoli Escherichia coli (strain K12) MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP DIP protein P0A9S3 original sequence version: 39 B35A2B004E5A4032 ftna_ecoli Bacterial non-heme ferritin Ferritin-1 ftnA ftn gen-165 rsgA b1905 JW1893 protein protein ecoli Escherichia coli (strain K12) MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFAEYSSLDELFQETYKHEQLITQKINELAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKELSTLDTQN DIP protein P0A998 original sequence version: 44 5B3AA08BCFE6CDA0 nudc_ecoli NAD-capped RNA hydrolase NudC nudC yjaD b3996 JW5548 NADH pyrophosphatase protein protein ecoli Escherichia coli (strain K12) MDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQRRHDMGSVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAEYE 368FAE0480AF4CB3 top1_ecoli DNA topoisomerase 1 topA supX b1274 DNA topoisomerase I Omega-protein Relaxing enzyme Untwisting enzyme Swivelase JW1266 protein protein ecoli Escherichia coli (strain K12) MGKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSGSAAKKSADSTSTKTAKKPKKDERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNIDRVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEVDASTTTPSGEALALQVTHQNDKPFRPVNKEQTQAAVSLLEKARYSVLEREDKPTTSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPESPNQYASKENSQEAHEAIRPSDVNVMAESLKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLTVGAGDFRLKARGRILRFDGWTKVMPALRKGDEDRILPAVNKGDALTLVELTPAQHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMENSLDQVANHEAEWKAVLDHFFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCPTCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGEDAETNALRAKRRCPKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHLKMGRFGKYMACTNEECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVFLAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYVSSEKDGKATGWSAFYVDGKWVEGKK DIP protein P06612 original sequence version: 108 DIP protein P06612 original sequence version: null 8C13F767FE5B178C opgg_ecoli Glucans biosynthesis protein G mdoG opgG b1048 JW1035 protein protein ecoli Escherichia coli (strain K12) MMKMRWLSAAVMLTLYTSSSWAFSIDDVAKQAQSLAGKGYETPKSNLPSVFRDMKYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATAVKRIKYSPDYFTFGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVIGAGQVYGLSARGLAIDTALPSGEEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAYKFVVMPGRDTVVDVQSKIYLRDKVGKLGVAPLTSMFLFGPNQPSPANNYRPELHDSNGLSIHAGNGEWIWRPLNNPKHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPSAWVTPKGEWGKGSVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDEDKLHAPDNAWVQQTRRSTGDVKQSNLIRQPDGTIAFVVDFTGAEMKKLPEDTPVTAQTSIGDNGEIVESTVRYNPVTKGWRLVMRVKVKDAKKTTEMRAALVNADQTLSETWSYQLPANE 0B53ECE270516C70 cara_ecoli Carbamoyl-phosphate synthase small chain carA pyrA b0032 Carbamoyl-phosphate synthetase glutamine chain JW0030 protein protein ecoli Escherichia coli (strain K12) MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK DIP protein P0A6F1 original sequence version: 58 DIP protein P0A6F1 original sequence version: 82 60BC26366417443F rl15_ecoli 50S ribosomal protein L15 rplO Large ribosomal subunit protein uL15 JW3263 b3301 protein protein ecoli Escherichia coli (strain K12) MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEIRLSDLAKVEGGVVDLNTLKAANIIGIQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIEE DIP protein P02413 original sequence version: 105 DIP protein P02413 original sequence version: null 53D14CD948815FD9 nank_ecoli N-acetylmannosamine kinase nanK yhcI N-acetyl-D-mannosamine kinase ManNAc kinase b3222 JW5538 protein protein ecoli Escherichia coli (strain K12) MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDGDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGCVEAIASGRGIAAAAQGELAGADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQGEKL E3109E2756B08612 luxs_ecoli S-ribosylhomocysteine lyase ygaG Autoinducer-2 production protein LuxS AI-2 synthesis protein luxS b2687 JW2662 protein protein ecoli Escherichia coli (strain K12) MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPKEKLQELHI DIP protein P45578 original sequence version: null 131F57F1866DA105 asnb_ecoli Asparagine synthetase B [glutamine-hydrolyzing] asnB b0674 JW0660 protein protein ecoli Escherichia coli (strain K12) MCSIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNAILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEVILALYQEKGPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVCRTIKEFPAGSYLWSQDGEIRSYYHRDWFDYDAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQDKMCGNGKMEKHILRECFEAYLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPLPSAAECVPGGPSVACSSAKAIEWDEAFKKMDDPSGRAVGVHQSAYK DIP protein P22106 original sequence version: null 9091B269112C9F5C dada_ecoli D-amino acid dehydrogenase dadA dadR b1189 JW1178 D-alanine dehydrogenase protein protein ecoli Escherichia coli (strain K12) MRVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLDGTQFQLKWMWQMLRNCDTSHYMENKGRMVRLAEYSRDCLKALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDAGVPYQLLESSRLAEVEPALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKFRFNTPVDQLLCDGEQIYGVKCGDEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYSLTIPIAQEDGAPVSTILDETYKIAITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMVVRDLYPRGGHVEQATFWTGLRPMTPDGTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQLLSDLLSGRTPAIPYEDLSVARYSRGFTPSRPGHLHGAHS EE747358845B6280 odo2_ecoli Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex b0727 sucB JW0716 2-oxoglutarate dehydrogenase complex component E2 protein protein ecoli Escherichia coli (strain K12) MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQQASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKAPAKESAPAAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLDV DIP protein P0AFG6 original sequence version: 49 8439E48C6D381277 tig-avta-1 1 71 unspecified role unspecified role prey prey 25 unspecified role unspecified role prey prey 26 unspecified role unspecified role prey prey 69 unspecified role unspecified role prey prey 16 unspecified role unspecified role prey prey 56 unspecified role unspecified role prey prey 47 unspecified role unspecified role prey prey 19 unspecified role unspecified role prey prey 27 unspecified role unspecified role prey prey 70 unspecified role unspecified role prey prey 59 unspecified role unspecified role prey prey 10 unspecified role unspecified role prey prey 67 unspecified role unspecified role prey prey 9 unspecified role unspecified role prey prey 54 unspecified role unspecified role prey prey 72 unspecified role unspecified role prey prey 73 unspecified role unspecified role prey prey 23 unspecified role unspecified role prey prey 14 unspecified role unspecified role prey prey 46 unspecified role unspecified role prey prey 36 unspecified role unspecified role prey prey 65 unspecified role unspecified role prey prey 74 unspecified role unspecified role prey prey 24 unspecified role unspecified role prey prey 12 unspecified role unspecified role prey prey 66 unspecified role unspecified role prey prey 45 unspecified role unspecified role prey prey 55 unspecified role unspecified role prey prey 8 unspecified role unspecified role prey prey 31 unspecified role unspecified role prey prey 57 unspecified role unspecified role bait bait c-terminal his tag his tag Hexa-His-tag 6-His-tag Histidine-tag Hexa-His-tag Histidine-tag 6-His-tag c-term range C-terminal range c-term range c-term range C-terminal range c-term range 68 unspecified role unspecified role prey prey 53 unspecified role unspecified role prey prey 58 unspecified role unspecified role prey prey 60 unspecified role unspecified role prey prey 22 unspecified role unspecified role prey prey 7 unspecified role unspecified role prey prey 34 unspecified role unspecified role prey prey 62 unspecified role unspecified role prey prey 33 unspecified role unspecified role prey prey 13 unspecified role unspecified role prey prey 17 unspecified role unspecified role prey prey 48 unspecified role unspecified role prey prey 28 unspecified role unspecified role prey prey 11 unspecified role unspecified role prey prey 76 unspecified role unspecified role prey prey 44 unspecified role unspecified role prey prey 15 unspecified role unspecified role prey prey 35 unspecified role unspecified role prey prey 51 unspecified role unspecified role prey prey 42 unspecified role unspecified role prey prey 39 unspecified role unspecified role prey prey 61 unspecified role unspecified role prey prey 41 unspecified role unspecified role prey prey 40 unspecified role unspecified role prey prey 37 unspecified role unspecified role prey prey 29 unspecified role unspecified role prey prey 38 unspecified role unspecified role prey prey 52 unspecified role unspecified role prey prey 43 unspecified role unspecified role prey prey 20 unspecified role unspecified role prey prey 21 unspecified role unspecified role prey prey 75 unspecified role unspecified role prey prey 63 unspecified role unspecified role prey prey 50 unspecified role unspecified role prey prey 64 unspecified role unspecified role prey prey 18 unspecified role unspecified role prey prey 32 unspecified role unspecified role prey prey association association AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list. Fig 1A, Table 1, Supp. Table 1 Complexes purified from cytosolic lysates rpsg-tig 5 49 unspecified role unspecified role neutral component neutral component ecoli Escherichia coli (strain K12) 30 unspecified role unspecified role neutral component neutral component ecoli Escherichia coli (strain K12) physical association physical association Size-distribution analysis of the T. maritima TF:S7 complex by sedimentation velocity ultracentrifugation and Lamm equation modeling. Fig. 2B rpsg-tig-1 6 49 unspecified role unspecified role neutral component neutral component region sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain ecoli Escherichia coli (strain K12) 30 unspecified role unspecified role neutral component neutral component ecoli Escherichia coli (strain K12) direct interaction direct interaction Full-length tmTF425 complexed with ribosomal protein tmS7 reproducibly formed tetragonal crystals (P43212) that diffracted anisotropically to 3.5/4.0 � spacings Supp. Table 3, Supp. Table 4 3.3A Rworking=25.7%, Rfree=32.8% rps7-tig-1 1 57 unspecified role unspecified role prey prey 52 unspecified role unspecified role bait bait c-terminal his tag his tag Hexa-His-tag 6-His-tag Histidine-tag Hexa-His-tag Histidine-tag 6-His-tag c-term range C-terminal range c-term range c-term range C-terminal range c-term range physical association physical association Using reverse pull-down assays, we confirmed that interactions persist between E. coli proteins TF and S7 and between TF and proOmpA, two of the identified TF substrates (Figure S2). Supp. Fig. 2 ompa-tig-1 1 57 unspecified role unspecified role prey prey 11 unspecified role unspecified role bait bait c-terminal his tag his tag Hexa-His-tag 6-His-tag Histidine-tag Hexa-His-tag Histidine-tag 6-His-tag c-term range C-terminal range c-term range c-term range C-terminal range c-term range physical association physical association Using reverse pull-down assays, we confirmed that interactions persist between E. coli proteins TF and S7 and between TF and proOmpA, two of the identified TF substrates (Figure S2). Supp. Fig. 2 rpsg-tig-2 3 49 unspecified role unspecified role bait bait ecoli Escherichia coli (strain K12) 30 unspecified role unspecified role prey prey ecoli Escherichia coli (strain K12) direct interaction direct interaction TF binding to S7 was analyzed on a model 3000 Biosensor (Biacore, AB). Supp. Fig. 5B ka = 5.03 x 103 M-1s-1, kd = 1.75 x 10-2 s-1 and KD = 3.5 10-6 M. rpsg-tig-3 4 30 unspecified role unspecified role neutral component neutral component ecoli Escherichia coli (strain K12) 49 unspecified role unspecified role neutral component neutral component region sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain ecoli Escherichia coli (strain K12) direct interaction direct interaction To test the domain requirements for tmTF multimerization and tmS7 binding we used chemical cross-linking Supp. Fig. 13C N-terminal deletion mutants of TIG reduced the size of, not did not completely inhibit, complex formation. rpsg-tig-4 2 30 unspecified role unspecified role neutral component neutral component Q9WZF8:p.[Glu266Arg;Glu269Arg;Glu273Arg] mutation disrupting mutation disrupting interaction mutation disrupting mutation analysis mutation analysis certain certain sequence position certain certain certain sequence position certain E R certain certain sequence position certain certain certain sequence position certain E R certain certain sequence position certain certain certain sequence position certain E R Fri Jul 22 11:14:00 BST 2016 This feature has been corrected as a result of our quality control procedures. The original label was 'glu269arg,glu273arg,glu266arg' Wed May 02 17:15:18 BST 2018 This feature has been corrected as a result of our quality control procedures. The original label was 'glu266arg,glu269arg,glu273arg' Tue Jun 30 18:27:24 BST 2020 This feature has been corrected as a result of our quality control procedures. The original label was 'p.[Glu266Arg;Glu269Arg;Glu273Arg]' ecoli Escherichia coli (strain K12) 49 unspecified role unspecified role neutral component neutral component region sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain ecoli Escherichia coli (strain K12) physical association physical association To test whether tmTF mutants bind tmS7 we used native gels. Supp. Fig. 13B