IntAct European Bioinformatics Institute IntAct intact http://www.ebi.ac.uk/ http://www.ebi.ac.uk/intact/query/${ac} EBI-[0-9]+|IA:[0-9]+ INTerAction database (IntAct) provides an open source database and toolkit for the storage, presentation and analysis of molecular interactions. http://www.ebi.ac.uk/intact European Bioinformatics Institute; Wellcome Trust Genome Campus; Hinxton, Cambridge; CB10 1SD; United Kingdom http://www.ebi.ac.uk/intact/ Composition and functional characterization of yeast 66S ribosome assembly intermediates. Composition and functional characterization of yeast 66S ribosome assembly intermediates. Mol. Cell (1097-2765) 2001 imex curation Harnpicharnchai P., Jakovljevic J., Horsey E., Miles T., Roman J., Rout M., Meagher D., Imai B., Guo Y., Brame CJ., Shabanowitz J., Hunt DF., Woolford JL. Proteins were subjected to one-dimensional PAGE, HPLC and SDS-PAGE or fractination by centrifugation of TAP-purified sample. 3 jw17@andrew.cmu.edu 21-Dec-2006: Contacted by JYOTI. Only protein-protein interactions yeasx Saccharomyces cerevisiae (Baker's yeast) Baker's yeast tap tandem affinity purification TAP TAP tap fingerprinting peptide massfingerprinting fingerprinting Harnpicharnchai P., Jakovljevic J., Horsey E., Miles T., Roman J., Rout M., Meagher D., Imai B., Guo Y., Brame CJ., Shabanowitz J., Hunt DF., Woolford JL. Proteins were subjected to one-dimensional PAGE, HPLC and SDS-PAGE or fractination by centrifugation of TAP-purified sample. 3 jw17@andrew.cmu.edu Accepted 2006-DEC-8 by DAVET. 21-Dec-2006: Contacted by JYOTI. Mol. Cell (1097-2765) 2001 Only protein-protein interactions imex curation rs24a_yeast 40S ribosomal protein S24-A RPS24A RPS24EA RP50 Small ribosomal subunit protein eS24-A YER074W protein protein yeast Saccharomyces cerevisiae Baker's yeast MSDAVTIRTRKVISNPLLARKQFVVDVLHPNRANVSKDELREKLAEVYKAEKDAVSVFGFRTQFGGGKSVGFGLVYNSVAEAKKFEPTYRLVRYGLAEKVEKASRQQRKQKKNRDKKIFGTGKRLAKKVARRNAD 81B82D361207442A brx1_yeast Ribosome biogenesis protein BRX1 YOL077C BRX1 protein protein yeast Saccharomyces cerevisiae Baker's yeast MSSIYKALAGKSKDNKSEKKQGNVKQFMNKQRTLLISSRGVNYRHRHLIQDLSGLLPHSRKEPKLDTKKDLQQLNEIAELYNCNNVLFFEARKHQDLYLWLSKPPNGPTIKFYIQNLHTMDELNFTGNCLKGSRPVLSFDQRFESSPHYQLIKELLVHNFGVPPNARKSKPFIDHVMSFSIVDDKIWVRTYEISHSTKNKEEYEDGEEDISLVEIGPRFVMTVILILEGSFGGPKIYENKQYVSPNVVRAQIKQQAAEEAKSRAEAAVERKIKRRENVLAADPLSNDALFK 31466853EF0E7301 31466853EF0E7301 rl23_yeast 60S ribosomal protein L23 RPL23A RPL17A YBL087C YBL0713 RPL23B RPL17B YER117W RPL17AA RPL17AB L17a YL32 protein protein yeast Saccharomyces cerevisiae Baker's yeast MSGNGAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKKGKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECADLWPRVASNSGVVV DEB983B3CB1DFAB1 rs13_yeast 40S ribosomal protein S13 RPS13 RPS13C YDR064W YD9609.18 D4252 S27a YS15 Small ribosomal subunit protein uS15 protein protein yeast Saccharomyces cerevisiae Baker's yeast MGRMHSAGKGISSSAIPYSRNAPAWFKLSSESVIEQIVKYARKGLTPSQIGVLLRDAHGVTQARVITGNKIMRILKSNGLAPEIPEDLYYLIKKAVSVRKHLERNRKDKDAKFRLILIESRIHRLARYYRTVAVLPPNWKYESATASALVN 9AA9EFBEC837053D has1_yeast ATP-dependent RNA helicase HAS1 YMR290C HAS1 Helicase associated with SET1 protein 1 protein protein yeast Saccharomyces cerevisiae Baker's yeast MATPSNKRSRDSESTEEPVVDEKSTSKQNNAAPEGEQTTCVEKFEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSLKFKPRNGTGIIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNEDRQSMLFSATQTTKVEDLARISLRPGPLFINVVPETDNSTADGLEQGYVVCDSDKRFLLLFSFLKRNQKKKIIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLTPNELGFLRYLKASKVPLNEYEFPENKIANVQSQLEKLIKSNYYLHQTAKDGYRSYLQAYASHSLKTVYQIDKLDLAKVAKSYGFPVPPKVNITIGASGKTPNTKRRKTHK EE15D51A7F6BE1A2 EE15D51A7F6BE1A2 nop16_yeast Nucleolar protein 16 NOP16 YER002W protein protein yeast Saccharomyces cerevisiae Baker's yeast MTSVRKRKMNRSSVGKATRRNKDKQRKINIQSNPIIAANWDYSLTMAQNYKKLGLRAKLQTPAGGKEADLSKVVKRIPLTKPVLDEDEDEDEGEDEQNDYNAATVELDENEIPEGGARIQRDKNGDVVRVVYGKKKNFDADEDVNEIKARDTTEETEVVKKLEELASRPVIRKERSQSEREEEWLEKLYKKHGDDYKKMFFDKKLNIYQQSEGDLKRRLLRWKKRNGIASK B1D27F0B817AADED B1D27F0B817AADED loc1_yeast 60S ribosomal subunit assembly/export protein LOC1 YFR001W LOC1 Localization of ASH1 mRNA protein 1 protein protein yeast Saccharomyces cerevisiae Baker's yeast MAPKKPSKRQNLRREVAPEVFQDSQARNQLANVPHLTEKSAQRKPSKTKVKKEQSLARLYGAKKDKKGKYSEKDLNIPTLNRAIVPGVKIRRGKKGKKFIADNDTLTLNRLITTIGDKYDDIAESKLEKARRLEEIRELKRKEIERKEALKQDKLEEKKDEIKKKSSVARTIRRKNKRDMLKSEAKASESKTEGRKVKKVSFAQ 69970294E9C980F9 69970294E9C980F9 nop15_yeast Ribosome biogenesis protein 15 YNL110C N1954 Nucleolar protein 15 NOP15 protein protein yeast Saccharomyces cerevisiae Baker's yeast MVKSTSKTSTKETVTKQPTEEKPIQEKEELALETSSSSSDEEDEKDEDEIEGLAASDDEQSGTHKIKRLNPKKQANEKKSKDKKTLEEYSGIIYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESMNNYLLMGHLLQVRVLPKGAKIEKLYKYKKRVLVEKGITKPVKQLKDNMKQKHEERIKKLAKSGIEFKW EC86E3C77C863292 EC86E3C77C863292 ebp2_yeast rRNA-processing protein EBP2 EBP2 YKL172W YKL636 EBNA1-binding protein homolog protein protein yeast Saccharomyces cerevisiae Baker's yeast MAKGFKLKELLSHQKEIEKAEKLENDLKKKKSQELKKEEPTIVTASNLKKLEKKEKKADVKKEVAADTEEYQSQALSKKEKRKLKKELKKMQEQDATEAQKHMSGDEDESGDDREEEEEEEEEEEGRLDLEKLAKSDSESEDDSESENDSEEDEDVVAKEESEEKEEQEEEQDVPLSDVEFDSDADVVPHHKLTVNNTKAMKHALERVQLPWKKHSFQEHQSVTSETNTDEHIKDIYDDTERELAFYKQSLDAVLVARDELKRLKVPFKRPLDYFAEMVKSDEHMDKIKGKLIEEASDKKAREEARRQRQLKKFGKQVQNATLQKRQLEKRETLEKIKSLKNKRKHNEIDHSEFNVGVEEEVEGKRFDRGRPNGKRAAKNAKYGQGGMKRFKRKNDATSSADVSGFSSRKMKGKTNRPGKSRRARRF 4A11F6CDF779DB5A 4A11F6CDF779DB5A pesc_yeast Pescadillo homolog NOP7 YPH1 Nucleolar protein 7 Ribosomal RNA-processing protein 13 RRP13 YGR103W protein protein yeast Saccharomyces cerevisiae Baker's yeast MRIKKKNTRGNARNFITRSQAVRKLQVSLADFRRLCIFKGIYPREPRNKKKANKGSTAPTTFYYAKDIQYLMHEPVLAKFREHKTFARKLTRALGRGEVSSAKRLEENRDSYTLDHIIKERYPSFPDAIRDIDDALNMLFLFSNLPSTNQVSSKIINDAQKICNQWLAYVAKERLVRKVFVSIKGVYYQANIKGEEVRWLVPFKFPENIPSDVDFRIMLTFLEFYSTLLHFVLYKLYTDSGLIYPPKLDLKKDKIISGLSSYILESRQEDSLLKLDPTEIEEDVKVESLDASTLKSALNADEANTDETEKEEEQEKKQEKEQEKEQNEETELDTFEDNNKNKGDILIQPSKYDSPVASLFSAFVFYVSREVPIDILEFLILSCGGNVISEAAMDQIENKKDIDMSKVTHQIVDRPVLKNKVAGRTYIQPQWIFDCINKGELVPANKYLPGEALPPHLSPWGDAIGYDPTAPVEEGEEEESESESESEDQVEEEDQEVVAGEEDDDDDEELQAQKELELEAQGIKYSETSEADKDVNKSKNKKRKVDEEEEEKKLKMIMMSNKQKKLYKKMKYSNAKKEEQAENLKKKKKQIAKQKAKLNKLDSKK 131001C956787BE5 131001C956787BE5 rl27_yeast 60S ribosomal protein L27 RPL27A RPL27 YHR010W RPL27B YDR471W D8035.14 protein protein yeasx Saccharomyces cerevisiae (Baker's yeast) Baker's yeast MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPLKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKNQWFFSKLRF F3924B039AA2D85D nip7_yeast 60S ribosome subunit biogenesis protein NIP7 YPL211W NIP7 Nuclear import protein 7 protein protein yeast Saccharomyces cerevisiae Baker's yeast MRQLTEEETKVVFEKLAGYIGRNISFLVDNKELPHVFRLQKDRVYYVPDHVAKLATSVARPNLMSLGICLGKFTKTGKFRLHITSLTVLAKHAKYKIWIKPNGEMPFLYGNHVLKAHVGKMSDDIPEHAGVIVFAMNDVPLGFGVSAKSTSESRNMQPTGIVAFRQADIGEYLRDEDTLFT 82EAE8E4B2FCC31A 82EAE8E4B2FCC31A cic1_yeast Proteasome-interacting protein CIC1 CIC1 NSA3 Core interacting component 1 YHR052W protein protein yeast Saccharomyces cerevisiae Baker's yeast MAKKSNSKKSTPVSTPSKEKKKVIEKKSSTAIPRERVIKAVNELIKFTSKPQDENNEEGNNGKKNLLEDDEEELKKDLQLIVVNNKSFTGTSKSFKLKLLNVKHSFYKPWKEASATAVKDFKVLLILKDSDIKKVSEDDLFDQLDSEGIKVDEIICGKDLKTVYKAYEARNAFISQFSLILADDSIVTSLPKLMGGKAYNKVETTPISIRTHANKEFSLTTLTNNIKKVYMNQLPVKLPRGTTLNVHLGNLEWLRPEEFVDNVELISEQLIKAYQIRSIFIKTNRSPVLPLYYNQDVLDELEAKKDKIEETHEDDMVTIDGVQVHLSTFNKGLMEIANPSELGSIFSKQINNAKKRSSSELEKESSESEAVKKAKS 13A2AFA0B927CD98 13A2AFA0B927CD98 rs6_yeast 40S ribosomal protein S6 RPS6A RPS101 RPS10B YPL090C LPG18C RPS6B RPS102 RPS10A YBR181C YBR1244 S10 YS4 RP9 protein protein yeast Saccharomyces cerevisiae Baker's yeast MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQGFPMKQGVLLPTRIKLLLTKNVSCYRPRRDGERKRKSVRGAIVGPDLAVLALVIVKKGEQELEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFVIRREVTKGEKTYTKAPKIQRLVTPQRLQRKRHQRALKVRNAQAQREAAAEYAQLLAKRLSERKAEKAEIRKRRASSLKA 78B523BB7FDABEE0 rl25_yeast 60S ribosomal protein L25 YOL127W RPL25 YL25 RP16L YP42' Large ribosomal subunit protein uL23 protein protein yeast Saccharomyces cerevisiae Baker's yeast MAPSAKATAAKKAVVKGTNGKKALKVRTSATFRLPKTLKLARAPKYASKAVPHYNRLDSYKVIEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKELYEVDVLKVNTLVRPNGTKKAYVRLTADYDALDIANRIGYI E40ED3A4FB8CA9F5 rpf1_yeast Ribosome production factor 1 RPF1 YHR088W Ribosome biogenesis protein RPF1 protein protein yeast Saccharomyces cerevisiae Baker's yeast MALGNEINITNKLKRQEIFADIKHEKNKERHTMRRKRAKEERENPELREQRLKENVTQTIENTRVYDETINKEVEGDEDDLMRYFNSNSNEPPKIFLTTNVNAKKSAYEFANILIEILPNVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVEVKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIFFRRHRYVFKDNERVGLQELGPQFTLKLKRLQRGIKEETEWEHKPEMDKEKKKFYL EC6EDB2FCE252D4A EC6EDB2FCE252D4A rl19_yeast 60S ribosomal protein L19 RPL19A YBR084C-A YBR084BC RPL19B YBL027W RPL23A YL14A RPL23B YBL0424 YL14B L23 YL14 RP15L RP33 protein protein yeast Saccharomyces cerevisiae Baker's yeast MANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSKSRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYHVLYKESKGNAFKHKRALVEHIIQAKADAQREKALNEEAEARRLKNRAARDRRAQRVAEKRDALLKEDA 776C3AB3D348EE99 rlp7_yeast Ribosome biogenesis protein RLP7 RPL7 N2014 YNL002C RLP7 Ribosomal protein L7-like protein protein yeast Saccharomyces cerevisiae Baker's yeast MSSTQDSKAQTLNSNPEILLRKRRNADRTRIERQELAKKKREEQIKKKRSNKNKFVRAESIVAKTLATSREKERIKRVSILEDKKAKNETQHIASGKDFILKITEKANGAEENSVDLEETEEEEDDGLIREKTTYDGKPALLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPSLSSIRSLIQKRGRIIYKGENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIHEIATMGESFSVCNFFLQPFKLNREVSGFGSLNRLRKIKQREAESRTRQFSNAATAPVIEVDIDSLLAKLN 64714DDFAFB90B5D 64714DDFAFB90B5D rs4_yeast 40S ribosomal protein S4 RPS4A RPS7B YJR145C J2186 RPS4B RPS7A YHR203C S7 YS6 RP5 protein protein yeast Saccharomyces cerevisiae Baker's yeast MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRRRAQQGL F109594560F34734 rlp24_yeast Ribosome biogenesis protein RLP24 RLP24 Ribosomal protein L24-like YLR009W protein protein yeast Saccharomyces cerevisiae Baker's yeast MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAGKELAVDSTLTFAQRRNVPVRYNRELVATTLKAMARIEEIRQKRERAFYKNRMRGNKEKDFLRDKKLVESNPELLRIREVEIARKLAKEQERAESVSEQEESEEEEEDMEIDSDEEEEEQLEKQKILLKNRRRNTKKIAF D7F1CD7EB92C6576 D7F1CD7EB92C6576 nsa1_yeast Ribosome biogenesis protein NSA1 YGL111W G2990 NSA1 NOP7-associated protein 1 protein protein yeast Saccharomyces cerevisiae Baker's yeast MRLLVSCVDSGSIKEVLCNIGTDTSVQSALQPFHVAPHLAEGLKAYVDRMWVISEDEAILARNSGVVELVKISKHLKENEALQVDPKGESKNEKSLSDDLPKFDISEFEITSSVSDLFDDAKLESLSSKSVKRTKLVDGFVTLCPIKKDSSNNTFVAATKSGLLHIIKKGEDKKLIKLASLGLKAPVEFLQLYDLEDTDTDKYIFAYGGEENLIKLVEIDSSFQSLKQIWEAKNVKNDRLDMRVPVWPMALRFLEPSPGKTEKGKLNYQFAAITRWSHLTKYSTQHGRKPFAQIDLLPNREPLSQMEVFDAKGENVVSSLGNFQSETFNELNVITTDYKKNVFKFDGNGRMLGKVGRDDITGSSTYIHVHDGKYLLQGGLDRYVRIFDIKTNKMLVKVYVGSRINFIVMLDDVEIEMPLSPSAKAAKGKQKRKVTELEEDADELWNKLEGKVAASKASKKSKI 4BF4BECDBB689F1A 4BF4BECDBB689F1A rs8_yeast 40S ribosomal protein S8 RPS8A YBL072C YBL0613 YBL06.05 RPS8B YER102W RPS14A RPS14B S14 YS9 RP19 protein protein yeast Saccharomyces cerevisiae Baker's yeast MGISRDSRHKRSATGAKRAQFRKKRKFELGRQPANTKIGAKRIHSVRTRGGNKKYRALRIETGNFSWASEGISKKTRIAGVVYHPSNNELVRTNTLTKAAIVQIDATPFRQWFEAHYGQTLGKKKNVKEEETVAKSKNAERKWAARAASAKIESSVESQFSAGRLYACISSRPGQSGRCDGYILEGEELAFYLRRLTAKK 3DB5CD6B4970C457 rl28_yeast 60S ribosomal protein L28 YGL103W RPL28 CYH2 L29 YL24 RP44 L27a RP62 Large ribosomal subunit protein uL15 protein protein yeast Saccharomyces cerevisiae Baker's yeast MPSRFTKTRKHRGHVSAGKGRIGKHRKHPGGRGMAGGQHHHRINMDKYHPGYFGKVGMRYFHKQQAHFWKPVLNLDKLWTLIPEDKRDQYLKSASKETAPVIDTLAAGYGKILGKGRIPNVPVIVKARFVSKLAEEKIRAAGGVVELIA B34C325C01E14ACB nog1_yeast Nucleolar GTP-binding protein 1 LPG15W YPL093W NOG1 protein protein yeast Saccharomyces cerevisiae Baker's yeast MQLSWKDIPTVAPANDLLDIVLNRTQRKTPTVIRPGFKITRIRAFYMRKVKYTGEGFVEKFEDILKGFPNINDVHPFHRDLMDTLYEKNHYKISLAAISRAKSLVEQVARDYVRLLKFGQSLFQCKQLKRAALGRMATIVKKLRDPLAYLEQVRQHIGRLPSIDPNTRTLLICGYPNVGKSSFLRCITKSDVDVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTEEMNNIEMQSIYAIAHLRSCVLYFMDLSEQCGFTIEAQVKLFHSIKPLFANKSVMVVINKTDIIRPEDLDEERAQLLESVKEVPGVEIMTSSCQLEENVMEVRNKACEKLLASRIENKLKSQSRINNVLNKIHVAQPQARDDVKRTPFIPESVKNLKKYDPEDPNRRKLARDIEAENGGAGVFNVNLKDKYLLEDDEWKNDIMPEILDGKNVYDFLDPEIAAKLQALEEEEEKLENEGFYNSDDEEEIYDGFEASEVDDIKEKAAWIRNRQKTMIAEARNRKSLKNKAIMPRSKLTKSFGKMEEHMSTLGHDMSALQDKQNRAARKNRYVERGSDVVFGDQDALTASTENGVKLRQTDRLLDGVADGSMRSKADRMAKMERRERNRHAKQGESDRHNAVSLSKHLFSGKRGVGKTDFR 640324779AE4D716 640324779AE4D716 rl2_yeast 60S ribosomal protein L2 RPL2A RPL5B YFR031C-A YFR031BC RPL2B RPL5A YIL018W L5 YL6 RP8 protein protein yeast Saccharomyces cerevisiae Baker's yeast MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLAKVVFRDPYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPGDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLLKAGRAFHKYRLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAARRTGLLRGSQKTQD 5159A980574DF05A rl5_yeast 60S ribosomal protein L5 RPL1 RPL1A RPL5 YPL131W LPI14W L1 L1a YL3 Ribosomal 5S RNA-binding protein Large ribosomal subunit protein uL18 protein protein yeast Saccharomyces cerevisiae Baker's yeast MAFQKDAKSSAYSSRFQTPFRRRREGKTDYYQRKRLVTQHKAKYNTPKYRLVVRFTNKDIICQIISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQKLGLDETYKGVEEVEGEYELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGALKGASDGGLYVPHSENRFPGWDFETEEIDPELLRSYIFGGHVSQYMEELADDDEERFSELFKGYLADDIDADSLEDIYTSAHEAIRADPAFKPTEKKFTKEQYAAESKKYRQTKLSKEERAARVAAKIAALAGQQ 14E3B2931C3CAE2B 14E3B2931C3CAE2B rl3_yeast 60S ribosomal protein L3 MAK8 RPL3 TCM1 YOR063W YOR29-14 YL1 RP1 Maintenance of killer protein 8 Trichodermin resistance protein Large ribosomal subunit protein uL3 protein protein yeast Saccharomyces cerevisiae Baker's yeast MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYSAKYAQDGAGIERELARIKKYASVVRVLVHTQIRKTPLAQKKAHLAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDTASKFGKGRFQTPAEKHAFMGTLKKDL 986769A218E9698A erb1_yeast Ribosome biogenesis protein ERB1 ERB1 YMR049C YM9796.02C Eukaryotic ribosome biogenesis protein 1 protein protein yeast Saccharomyces cerevisiae Baker's yeast MMAKNNKTTEAKMSKKRAASEESDVEEDEDKLLSVDGLIDAEASESDEDDDEYESAVEEKESSSDKEAQDDSDDDSDAELNKLLAEEEGDGEEDYDSSEFSDDTTSLTDRLSGVKLQTIVDPNIYSKYADGSDRIIKPEINPVYDSDDSDAETQNTIGNIPLSAYDEMPHIGYDINGKRIMRPAKGSALDQLLDSIELPEGWTGLLDKNSGSSLNLTKEELELISKIQRNEQTDDSINPYEPLIDWFTRHEEVMPLTAVPEPKRRFVPSKNEAKRVMKIVRAIREGRIIPPKKLKEMKEKEKIENYQYDLWGDSTETNDHVMHLRAPKLPPPTNEESYNPPEEYLLSPEEKEAWENTEYSERERNFIPQKYSALRKVPGYGESIRERFERSLDLYLAPRVRKNKLNIDPNSLIPELPSPKDLRPFPIRCSTIYAGHKGKVRTLSIDPSGLWLATGSDDGTVRVWEILTGREVYRTTLIDDEENPDYHIECIEWNPDANNGILAVAVGENIHLIVPPIFGYDIENNGKTKIEDGFGYDTFGTVKKSNLEVNENGDGDEDGENESAKNAVKKQVAQWNKPSQKQLEKDICITISCKKTVKKLSWHRKGDYFVTVQPDSGNTSVLIHQVSKHLTQSPFKKSKGIIMDAKFHPFKPQLFVCSQRYVRIYDLSQQILVKKLLPGARWLSKIDIHPRGDNLIASSFDKRVLWHDLDLASTPYKTLRYHEKAVRSVNFHKKLPLFSSAADDGTIHVFHATVYDDMMKNPMIVPLKKLTGHKVINSLGVLDAIWHPREAWLFSAGADNTARLWTT 6542DFE4670341CA 6542DFE4670341CA nsa2_yeast Ribosome biogenesis protein NSA2 YER126C SYGP-ORF47 NSA2 NOP7-associated protein 2 protein protein yeast Saccharomyces cerevisiae Baker's yeast MPQNDYIERHIKQHGKRLDHEERKRKREARESHKISERAQKLTGWKGKQFAKKRYAEKVSMRKKIKAHEQSKVKGSSKPLDTDGDALPTYLLDREQNNTAKAISSSIKQKRLEKADKFSVPLPKVRGISEEEMFKVIKTGKSRSKSWKRMITKHTFVGEGFTRRPVKMERIIRPSALRQKKANVTHPELGVTVFLPILAVKKNPQSPMYTQLGVLTKGTIIEVNVSELGMVTAGGKVVWGKYAQVTNEPDRDGCVNAVLLV 545C8B4250BCB0C9 545C8B4250BCB0C9 if6_yeast Eukaryotic translation initiation factor 6 TIF6 CDC95 YPR016C LPZ15C protein protein yeast Saccharomyces cerevisiae Baker's yeast MATRTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEAELGDAIPIVHTTIAGTRIIGRMTAGNRRGLLVPTQTTDQELQHLRNSLPDSVKIQRVEERLSALGNVICCNDYVALVHPDIDRETEELISDVLGVEVFRQTISGNILVGSYCSLSNQGGLVHPQTSVQDQEELSSLLQVPLVAGTVNRGSSVVGAGMVVNDYLAVTGLDTTAPELSVIESIFRLQDAQPESISGNLRDTLIETYS 1BCE041C61DFD2A8 1BCE041C61DFD2A8 mak16_yeast Protein MAK16 MAK16 Maintenance of killer protein 16 YAL025C protein protein yeast Saccharomyces cerevisiae Baker's yeast MSDEIVWQVINQSFCSHRIKAPNGQNFCRNEYNVTGLCTRQSCPLANSKYATVKCDNGKLYLYMKTPERAHTPAKLWERIKLSKNYTKALQQIDEHLLHWSKFFRHKCKQRFTKLTQVMITERRLALREEERHYVGVAPKVKRREQNRERKALVAAKIEKAIEKELMDRLKSGAYGDKPLNVDEKVWKKIMGQMEEENSQDEEEDWDEEEESDDGEVEYVADDGEGEYVDVDDLEKWLADSDREASSASESESDSESESDSDSDEENKNSAKRRKKGTSAKTKRPKVEIEYEEEHEVQNAEQEVAQ 309ED6897EA24F73 309ED6897EA24F73 rs2_yeast 40S ribosomal protein S2 RPS2 SUP38 SUP44 YGL123W G2893 RPS4 S4 YS5 RP12 Omnipotent suppressor protein SUP44 Small ribosomal subunit protein uS5 protein protein yeast Saccharomyces cerevisiae Baker's yeast MSAPEAQQQKRGGFGGRNRGRPNRRGPRNTEEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLLPGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLENTLKAAFVAIGNTYGFLTPNLWAEQPLPVSPLDIYSDEASAQKKRF 5EFDA4C7DE7BDFFB rs15_yeast 40S ribosomal protein S15 RPS15 RPS21 YOL040C S21 YS21 RP52 RIG protein Small ribosomal subunit protein uS19 protein protein yeast Saccharomyces cerevisiae Baker's yeast MSQAVNAKKRVFKTHSYRGVDLEKLLEMSTEDFVKLAPARVRRRFARGMTSKPAGFMKKLRAAKLAAPENEKPAPVRTHMRNMIIVPEMIGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTPVRHGRAGATTSRFIPLK 06B564FD68051CD2 ytm1_yeast Ribosome biogenesis protein YTM1 YTM1 Microtubule-associated protein YTM1 YOR272W protein protein yeast Saccharomyces cerevisiae Baker's yeast MTEDKSQVKIRFFTREKDELLHVQDTPMYAPISLKRYGLSEIVNHLLGSEKPVPFDFLIEGELLRTSLHDYLTKKGLSSEASLNVEYTRAILPPSYLNSFSNEDWVSSLDVGDGSKHIISGSYDGIVRTWDLSGNVQKQYSGHSGPIRAVKYISNTRLVSAGNDRTLRLWKTKNDDLKLTSQQQAQEDDDDEVNIEDGKTLAILEGHKAPVVSIDVSDNSRILSASYDNSIGFWSTIYKEMTVVDPLEDINNPNNKISTAARKRRKLTMKDGTIRRRAPLSLLESHTAPVEQVIFDSTDNTVGYSVSQDHTIKTWDLVTARCIDTRTTSYSLLSIAQLSTLNLLACGSSARHITLHDPRVGASSKVTQQQLIGHKNFVSSLDTCPENEYILCSGSHDGTVKVWDVRSTSPMYTITREDKSVQKGVNDKVFAVKWAEKVGIISAGQDKKIQINKGDNIFKN DBC26738651433C4 DBC26738651433C4 rs18_yeast 40S ribosomal protein S18 RPS18A YDR450W D9461.35 RPS18B YML026C protein protein yeast Saccharomyces cerevisiae Baker's yeast MSLVVQEQGSFQHILRLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQNPTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRVRGQHTKTTGRRRA 1F50BF9ADD20CA19 rl20_yeast 60S ribosomal protein L20 RPL20A RPL18A2 YMR242C YM9408.04C RPL20B RPL18A1 RPL18B YOR312C O6116 RPL18A L18a protein protein yeast Saccharomyces cerevisiae Baker's yeast MAHFKEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRYWYFLQKLHKVKKASGEIVSINQINEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRSIHILKVAEIEKTADVKRQYVKQFLTKDLKFPLPHRVQKSTKTFSYKRPSTFY 28D470F11A48A43A rl12_yeast 60S ribosomal protein L12 RPL12A RPL15B YEL054C RPL12B RPL15A YDR418W D9461.7 L15 YL23 protein protein yeast Saccharomyces cerevisiae Baker's yeast MPPKFDPNEVKYLYLRAVGGEVGASAALAPKIGPLGLSPKKVGEDIAKATKEFKGIKVTVQLKIQNRQAAASVVPSASSLVITALKEPPRDRKKDKNVKHSGNIQLDEIIEIARQMRDKSFGRTLASVTKEILGTAQSVGCRVDFKNPHDIIEGINAGEIEIPEN This sequence has been withdrawn from Uniprot. 0B23A483781DFBE5 rs3_yeast 40S ribosomal protein S3 RPS3 SUF14 YNL178W N1653 YS3 RP13 Small ribosomal subunit protein uS3 protein protein yeast Saccharomyces cerevisiae Baker's yeast MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKVKIMRDPAKSRTGPKALPDAVTIIEPKEEEPILAPSVKDYRPAEETEAQAEPVEA B85C0DFEB011745F B85C0DFEB011745F rl10_yeast 60S ribosomal protein L10 YLR075W RPL10 GRC5 QSR1 L9 Ubiquinol-cytochrome C reductase complex subunit VI-requiring protein Large ribosomal subunit protein uL16 protein protein yeast Saccharomyces cerevisiae Baker's yeast MARRPARCYRYQKNKPYPKSRYNRAVPDSKIRIYDLGKKKATVDEFPLCVHLVSNELEQLSSEALEAARICANKYMTTVSGRDAFHLRVRVHPFHVLRINKMLSCAGADRLQQGMRGAWGKPHGLAARVDIGQIIFSVRTKDSNKDVVVEGLRRARYKFPGQQKIILSKKWGFTNLDRPEYLKKREAGEVKDDGAFVKFLSKKGSLENNIREFPEYFAAQA 6FF976A3800F347D drs1_yeast ATP-dependent RNA helicase DRS1 DRS1 YLL008W L1345 Deficiency of ribosomal subunits protein 1 protein protein yeast Saccharomyces cerevisiae Baker's yeast MVVGTKKYSNLDFVPTISDSEDDVPILDSSDDEKVEAKKTTKKRKGKNNKKKVSEGDNLDEDVHEDLDAGFKFDLDADDTTSNFQGWNFLAEGESNKDDAEAFVKKDVDLDKIIRRKGGLVKMAHIDSKQEEETEKEKVEKENDSDDEELAMDGFGMGAPMNNGDENQSEEEEEEEEKEEEEEEEEEQEEMTLEKGGKDDEIDEEDDSEEAKADFYAPETEGDEAKKQMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQNLLFSATMNSKIKSLVSLSLKKPVRIMIDPPKKAATKLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFVGESSQDRSIVRAAIKSVEENKSLTQGKALGRNVDWVQIEETNKLVESMNDTIEDILVEEKEEKEILRAEMQLRKGENMLKHKKEIQARPRRTWFQSESDKKNSKVLGALSRNKKVTNSKKRKREEAKADGNGARSYRKTKTDRIADQERTFKKQKSTNSNKKKGFKSRR 60747607A6E5E4A8 60747607A6E5E4A8 rl18_yeast 60S ribosomal protein L18 RPL18A RP28A YOL120C RPL18B RP28B YNL301C N0425 RP28 protein protein yeast Saccharomyces cerevisiae Baker's yeast MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPPVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMGPHKGKAPRILSTGRKFERARGRRRSKGFKV D097B187F369EACD spb1_yeast 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase SPB1 YCL054W YCL54W YCL431 S-adenosyl-L-methionine-dependent methyltransferase Suppressor of PAB1 protein 1 2'-O-ribose RNA methyltransferase SPB1 AdoMet-dependent rRNA methyltransferase SPB1 protein protein yeast Saccharomyces cerevisiae Baker's yeast MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASKLCPVNSLIIGVDIVPMKPMPNVITFQSDITTEDCRSKLRGYMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVNGTFVTKIFRSKDYNKLIWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFKAPKRLDPRLLDPKEVFEELPDGQQNMESKIYNPEKKVRKRQGYEEGDNLLYHETSILDFVRTEDPISMLGEMNKFTIDENDHEWKILKKLKQTTDEFRSCIEDLKVLGKKDFKMILRWRKIAREILGIEVKDDAKTEIEVVPLTEEEQIEKDLQGLQEKQRLNVKRERRRKNEMKQKELQRMQMNMITPTDIGIEAASLGKESLFNLKTAEKTGILNDLAKGKKRMIFTDDELAKDNDIYIDENIMIKDKDSAADADDLESELNAMYSDYKTRRSERDAKFRAKQARGGDNEEEWTGFNEGSLEKKEEEGKDYIEDNDDEGVEGDSDDDEAITNLISKLKGQEGDHKLSSKARMIFNDPIFNNVEPDLPVNTVNDGIMSSESVGDISKLNKKRKHEEMHQKQDEADSSDESSSDDSDFEIVANDNASEEFDSDYDSEEEKNQTKKEKHSRDIDIATVEAMTLAHQLALGQKNKHDLVDEGFNRYTFRDTENLPDWFLEDEKEHSKINKPITKEAAMAIKEKIKAMNARPIKKVAEAKARKRMRAVARLEKIKKKAGLINDDSDKTEKDKAEEISRLMRKVTKKPKTKPKVTLVVASGRNKGLAGRPKGVKGKYKMVDGVMKNEQRALRRIAKKHHKKK D7A080299B0C7E24 D7A080299B0C7E24 rl1_yeast 60S ribosomal protein L1 RPL1A SSM1 SSM1A YPL220W RPL1B SSM1B SSM2 YGL135W G2834 L10a protein protein yeast Saccharomyces cerevisiae Baker's yeast MSKITSSQVREHVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGSLKLPNCPRPNMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQVPRLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKKVLCLAVAVGNVEMEEDVLVNQILMSVNFFVSLLKKNWQNVGSLVVKSSMGPAFRLY C890A90505655F2A rrp1_yeast Ribosomal RNA-processing protein 1 RRP1 D4478 YDR087C protein protein yeast Saccharomyces cerevisiae Baker's yeast METSNFVKQLSSNNRKTRVNALEALKKYLTAKQFKENKQIEFNKLWKGLYYAMWFSDRPRPQQRLANELGELHGLYFDPKDNSTADELTTNDKAFIKFSRGFWKVMCFEWFNIDRYRLDKYLLLIRRVLFSQLKYLQSRNWDKKLVDEYIKKVLRWLPLSGSPKVYTGIPIHIVDILLDEWERLLKDGDEDDEDEENKEEEMRKIAESAKKTPLADVIAIFQDIVADYNNSKVLREKIKEDLFSDTRLVSWDILEGETQHNDSSNESEEEEEEEWKGF 7E906A028ADAE8A6 7E906A028ADAE8A6 nop7-cic1 1 36 unspecified role unspecified role prey prey 34 unspecified role unspecified role prey prey 2 unspecified role unspecified role prey prey 39 unspecified role unspecified role prey prey 33 unspecified role unspecified role prey prey 15 unspecified role unspecified role prey prey 23 unspecified role unspecified role prey prey 20 unspecified role unspecified role prey prey 5 unspecified role unspecified role prey prey 38 unspecified role unspecified role prey prey 40 unspecified role unspecified role prey prey 27 unspecified role unspecified role prey prey 28 unspecified role unspecified role prey prey 26 unspecified role unspecified role prey prey 44 unspecified role unspecified role prey prey 35 unspecified role unspecified role prey prey 11 unspecified role unspecified role prey prey 14 unspecified role unspecified role prey prey 9 unspecified role unspecified role prey prey 22 unspecified role unspecified role prey prey 8 unspecified role unspecified role prey prey 30 unspecified role unspecified role prey prey 45 unspecified role unspecified role prey prey 43 unspecified role unspecified role prey prey 7 unspecified role unspecified role prey prey 10 unspecified role unspecified role prey prey 13 unspecified role unspecified role prey prey 25 unspecified role unspecified role prey prey 19 unspecified role unspecified role prey prey 31 unspecified role unspecified role prey prey 29 unspecified role unspecified role prey prey 32 unspecified role unspecified role prey prey 17 unspecified role unspecified role prey prey 21 unspecified role unspecified role prey prey 6 unspecified role unspecified role prey prey 41 unspecified role unspecified role prey prey 3 unspecified role unspecified role prey prey 11 unspecified role unspecified role bait bait c-terminus tap tagged calmodulin binding peptide plus protein a tag CBP-ProtA tagged CBP-ProtA tagged tap tagged c-term range C-terminal range c-term range c-term range C-terminal range c-term range 12 unspecified role unspecified role prey prey 24 unspecified role unspecified role prey prey 16 unspecified role unspecified role prey prey 4 unspecified role unspecified role prey prey 37 unspecified role unspecified role prey prey 18 unspecified role unspecified role prey prey 42 unspecified role unspecified role prey prey association association 1 and supplement table S1 RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.