IntAct European Bioinformatics Institute IntAct intact http://www.ebi.ac.uk/ http://www.ebi.ac.uk/intact/query/${ac} EBI-[0-9]+|IA:[0-9]+ INTerAction database (IntAct) provides an open source database and toolkit for the storage, presentation and analysis of molecular interactions. http://www.ebi.ac.uk/intact European Bioinformatics Institute; Wellcome Trust Genome Campus; Hinxton, Cambridge; CB10 1SD; United Kingdom http://www.ebi.ac.uk/intact/ The protein interaction network of bacteriophage lambda with its host, Escherichia coli. The protein interaction network of bacteriophage lambda with its host, Escherichia coli. J. Virol. (0022-538X) 2013 imex curation Blasche S., Wuchty S., Rajagopala S.V., Uetz P. Virus - Publications including interactions involving viral proteins 68 phage lambda ORFs were cloned into the bait vectors pGBKT7g and pDEST32 and screened against the E. coli W3110 library of single ORF clones in the prey vectors pGADT7g and pDEST22. Each bait was tested against preys pooled in different combinations and the positive preys were identified by colony PCR and sequencing. Promiscuous baits and preys were identified and discarded and finally 144 interacting lambda-host pairs were found as multiple hits in these initial screens. This set and selected additional interactions from the initial screen were re-tested using binary Y2H tests. Out of these 162 were tested positive, yielding an overlap of 62 “high confidence” interactions", which are the ones curated in this entry. peter@uetz.us 30-Sept-2013: Contacted by IntAct-Help. Only protein-protein interactions yeasx Saccharomyces cerevisiae (Baker's yeast) Baker's yeast 2 hybrid two hybrid 2H 2h Gal4 transcription regeneration two-hybrid yeast two hybrid 2-hybrid classical two hybrid classical two hybrid 2H two-hybrid 2-hybrid Gal4 transcription regeneration 2h yeast two hybrid Y2H Y-2H 2 hybrid predetermined predetermined participant predetermined Blasche S., Wuchty S., Rajagopala S.V., Uetz P. Virus - Publications including interactions involving viral proteins 68 phage lambda ORFs were cloned into the bait vectors pGBKT7g and pDEST32 and screened against the E. coli W3110 library of single ORF clones in the prey vectors pGADT7g and pDEST22. Each bait was tested against preys pooled in different combinations and the positive preys were identified by colony PCR and sequencing. Promiscuous baits and preys were identified and discarded and finally 144 interacting lambda-host pairs were found as multiple hits in these initial screens. This set and selected additional interactions from the initial screen were re-tested using binary Y2H tests. Out of these 162 were tested positive, yielding an overlap of 62 “high confidence” interactions", which are the ones curated in this entry. peter@uetz.us Accepted 2013-SEP-23 by MGT 30-Sept-2013: Contacted by IntAct-Help. J. Virol. (0022-538X) 2013 Only protein-protein interactions imex curation Files from this file can be found in \pro6\intact\local\data\curation-material\2013\blasche-2013 chac_ecoli Glutathione-specific gamma-glutamylcyclotransferase chaC Cation transport regulatory protein ChaC JW1209 b1218 protein protein ecoli Escherichia coli (strain K12) MITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVWIFGYGSLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGRTVNAIVFIMDPRHPEYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLAENFPDGVLRPGFA 9D7088566D553A7C yhdw_ecoli Putative amino-acid ABC transporter-binding protein YhdW yhdW JW3236 b3268 protein protein ecoli Escherichia coli (strain K12) MKKMMIATLAAASVLLAVANQAXAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 404FE51DB30FBB40 yeiw_ecoli UPF0153 protein YeiW yeiW JW5361 b4502 protein protein ecoli Escherichia coli (strain K12) MECRPGCGACCTAPSISSPIPGMPDGKPANTPCIQLDEQQRCKIFTSPLRPKVCAGLQASAEMCGNSRQQAMTWLIDLEMLTAP 08CF6D285908C403 c6zcx5_lambd protein protein lambd Enterobacteria phage lambda Bacteriophage lambda MNKEQSADDPSVDLIRVKNMLNSTISMSYPDVVIACIEHKVSLEAFRAIEAALVKHDNNMKDYSLVVD 7D0147A2EC229D06 envr_ecoli Probable acrEF/envCD operon repressor yhdK envR b3264 JW3232 protein protein ecoli Escherichia coli (strain K12) MAKRTKAEALKTRQELIETAIAQFAQHGVSKTTLNDIADAANVTRGAIYWHFENKTQLFNEMWLQQPSLRELIQEHLTAGLEHDPFQQLREKLIVGLQYIAKIPRQQALLKILYHKCEFNDEMLAEGVIREKMGFNPQTLREVLQACQQQGCVANNLDLDVVMIIIDGAFSGIVQNWLMNMAGYDLYKQAPALVDNVLRMFMPDENITKLIHQTNELSVM 024F98B20698D0F7 c6zcu8_lambd protein protein lambd Enterobacteria phage lambda Bacteriophage lambda MSINELESEQKDWALSMLCRSGVLSPCRHHEGVYVDEGIDIESAYKYSMKVYKSNEDKSPFCNVREMTDTVQNYYHEYGGNDTCPLCTKHIDD CE03994C937EE9B5 yqhc_ecoli Uncharacterized HTH-type transcriptional regulator YqhC yqhC JW5849 b3010 protein protein ecoli Escherichia coli (strain K12) MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 87D5307551EF2D03 hldd_ecoli ADP-L-glycero-D-manno-heptose-6-epimerase hldD htrM rfaD waaD b3619 JW3594 ADP-L-glycero-beta-D-manno-heptose-6-epimerase protein protein ecoli Escherichia coli (strain K12) MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA DIP protein P67910 original sequence version: 60 4B9388A879CB7522 vrpp_lambd Replication protein P P protein protein lambd Enterobacteria phage lambda Bacteriophage lambda MKNIAAQMVNFDREQMRRIANNMPEQYDEKPQVQQVAQIINGVFSQLLATFPASLANRDQNEVNEIRRQWVLAFRENGITTMEQVNAGMRVARRQNRPFLPSPGQFVAWCREEASVTAGLPNVSELVDMVYEYCRKRGLYPDAESYPWKSNAHYWLVTNLYQNMRANALTDAELRRKAADELVHMTARINRGEAIPEPVKQLPVMGGRPLNRAQALAKIAEIKAKFGLKGASV 31342D4D356CB33C rl27_ecoli 50S ribosomal protein L27 rpmA Large ribosomal subunit protein bL27 JW3152 b3185 protein protein ecoli Escherichia coli (strain K12) MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE DIP protein P0A7L8 original sequence version: 55 B43AAE180ABC23EA eutc_ecoli Ethanolamine ammonia-lyase small subunit eutC Ethanolamine ammonia-lyase beta subunit Ethanolamine ammonia-lyase light chain Ethanolamine deaminase small subunit JW2433 b2440 protein protein ecoli Escherichia coli (strain K12) MDQKQIEEIVRSVMASMGQAAPAPSEAKCATTNCAAPVTSESCALDLGSAEAKAWIGVENPHRADVLTELRRSTVARVCTGRAGPRPRTQALLRFLADHSRSKDTVLKEVPEEWVKAQGLLEVRSEISDKNLYLTRPDMGRRLCAEAVEALKAQCVANPDVQVVISDGLSTDAITVNYEEILPPLMAGLKQAGLKVGTPFFVRYGRVKIEDQIGEILGAKVVILLVGERPGLGQSESLSCYAVYSPRMATTVEADRTCISNIHQGGTPPVEAAAVIVDLAKRMLEQKASGINMTR C7E87143B8E050E5 npd_ecoli NAD-dependent protein deacylase cobB b1120 ycfY Regulatory protein SIR2 homolog JW1106 protein protein ecoli Escherichia coli (strain K12) MLSRRGHRLSRFRKNKRRLRERLRQRIFFRDKVVPEAMEKPRVLVLTGAGISAESGIRTFRAADGLWEEHRVEDVATPEGFDRDPELVQAFYNARRRQLQQPEIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAGNTNVIHMHGELLKVRCSQSGQVLDWTGDVTPEDKCHCCQFPAPLRPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLEPSQVGNEFAEKYYGPASQVVPEFVEKLLKGLKAGSIA DIP protein P75960 original sequence version: null 779CF84961325CB9 terl_lambd Terminase, large subunit A DNA-packaging protein A Large terminase protein gpA lambdap02 protein protein lambd Enterobacteria phage lambda Bacteriophage lambda MNISNSQVNRLRHFVRAGLRSLFRPEPQTAVEWADANYYLPKESAYQEGRWETLPFQRAIMNAMGSDYIREVNVVKSARVGYSKMLLGVYAYFIEHKQRNTLIWLPTDGDAENFMKTHVEPTIRDIPSLLALAPWYGKKHRDNTLTMKRFTNGRGFWCLGGKAAKNYREKSVDVAGYDELAAFDDDIEQEGSPTFLGDKRIEGSVWPKSIRGSTPKVRGTCQIERAASESPHFMRFHVACPHCGEEQYLKFGDKETPFGLKWTPDDPSSVFYLCEHNACVIRQQELDFTDARYICEKTGIWTRDGILWFSSSGEEIEPPDSVTFHIWTAYSPFTTWVQIVKDWMKTKGDTGKRKTFVNTTLGETWEAKIGERPDAEVMAERKEHYSAPVPDRVAYLTAGIDSQLDRYEMRVWGWGPGEESWLIDRQIIMGRHDDEQTLLRVDEAINKTYTRRNGAEMSISRICWDTGGIDPTIVYERSKKHGLFRVIPIKGASVYGKPVASMPRKRNKNGVYLTEIGTDTAKEQIYNRFTLTPEGDEPLPGAVHFPNNPDIFDLTEAQQLTAEEQVEKWVDGRKKILWDSKKRRNEALDCFVYALAALRISISRWQLDLSALLASLQEEDGAATNKKTLADYARALSGEDE 4C5719C9A2D87B7A fdoh_ecoli Formate dehydrogenase-O iron-sulfur subunit fdoH b3893 Formate dehydrogenase-O subunit beta FDH-Z subunit beta Aerobic formate dehydrogenase iron-sulfur subunit JW3864 protein protein ecoli Escherichia coli (strain K12) MAYQSQDIIRRSATNGLTPAPQARDFQEEVAKLIDVTTCIGCKACQVACSEWNDIRDTVGNNIGVYDNPNDLSAKSWTVMRFSEVEQNDKLEWLIRKDGCMHCSDPGCLKACPAEGAIIQYANGIVDFQSEQCIGCGYCIAGCPFDIPRLNPEDNRVYKCTLCVDRVVVGQEPACVKTCPTGAIHFGTKESMKTLASERVAELKTRGYDNAGLYDPAGVGGTHVMYVLHHADKPNLYHGLPENPEISETVKFWKGIWKPLAAVGFAATFAASIFHYVGVGPNRADEEENNLHEEKDEERK 950B40FE1A6016E7 nuog_ecoli NADH-quinone oxidoreductase subunit G NADH dehydrogenase I subunit G NDH-1 subunit G NUO7 nuoG b2283 JW2278 protein protein ecoli Escherichia coli (strain K12) MATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRYYKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRKWDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLKDRPRQPVQRRGDDFITLNAEQAMQGAADILRQSKKVIGIGSPRASVESNFALRELVGEENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVALAVRQAVKGKAREMAAAQKVADWQIAAILNIGQRAKHPLFVTNVDDTRLDDIAAWTYRAPVEDQARLGFAIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLEVIQAAANVAKALKGRGADVGITMIARSVNSMGLGIMGGGSLEEALTELETGRADAVVVLENDLHRHASAIRVNAALAKAPLVMVVDHQRTAIMENAHLVLSAASFAESDGTVINNEGRAQRFFQVYDPAYYDSKTVMLESWRWLHSLHSTLLSREVDWTQLDHVIDAVVAKIPELAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANISVHEPRQPQDIDTMFTFSMEGNNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGDPGVRLFETSENGLDYFTSVPARFQPQDGKWRIAPYYHLFGSDELSQRAPVFQSRMPQPYIKLNPADAAKLGVNAGTRVSFSYDGNTVTLPVEIAEGLTAGQVGLPMGMSGIAPVLAGAHLEDLKEAQQ DIP protein P33602 original sequence version: 104 DIP protein P33602 original sequence version: null 7B8626E19709D540 paac_ecoli 1,2-phenylacetyl-CoA epoxidase, subunit C paaC b1390 JW1385 ydbP 1,2-phenylacetyl-CoA epoxidase, structural subunit beta 1,2-phenylacetyl-CoA monooxygenase, subunit C protein protein ecoli Escherichia coli (strain K12) MNQLTAYTLRLGDNCLVLSQRLGEWCGHAPELEIDLALANIGLDLLGQARNFLSYAAELAGEGDEDTLAFTRDERQFSNLLLVEQPNGNFADTIARQYFIDAWHVALFTRLMESRDPQLAAISAKAIKEARYHLRFSRGWLERLGNGTDVSGQKMQQAINKLWRFTAELFDADEIDIALSEEGIAVDPRTLRAAWEAEVFAGINEATLNVPQEQAYRTGGKKGLHTEHLGPMLAEMQYLQRVLPGQQW 024AD161DF8E4380 nusa_ecoli Transcription termination/antitermination protein NusA N utilization substance protein A Transcription termination/antitermination L factor JW3138 b3169 nusA protein protein ecoli Escherichia coli (strain K12) MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVQIDRKSGDFDTFRRWLVVDEVTQPTKEITLEAARYEDESLNLGDYVEDQIESVTFDRITTQTAKQVIVQKVREAERAMVVDQFREHEGEIITGVVKKVNRDNISLDLGNNAEAVILREDMLPRENFRPGDRVRGVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIDTFTKYLDIDEDFATVLVEEGFSTLEELAYVPMKELLEIEGLDEPTVEALRERAKNALATIAQAQEESLGDNKPADDLLNLEGVDRDLAFKLAARGVCTLEDLAEQGIDDLADIEGLTDEKAGALIMAARNICWFGDEA DIP protein P0AFF6 original sequence version: 45 DIP protein P0AFF6 original sequence version: 60 This sequence has been withdrawn from Uniprot. 7D4DD019172FBAD0 msrc_ecoli Free methionine-R-sulfoxide reductase msrC yebR JW1821 b1832 protein protein ecoli Escherichia coli (strain K12) MNKTEFYADLNRDFNALMAGETSFLATLANTSALLYERLTDINWAGFYLLEDDTLVLGPFQGKIACVRIPVGRGVCGTAVARNQVQRIEDVHVFDGHIACDAASNSEIVLPLVVKNQIIGVLDIDSTVFGRFTDEDEQGLRQLVAQLEKVLATTDYKKFFASVAG B49F1D1740DD5D43 j3jzz6_lambd protein protein lambd Enterobacteria phage lambda Bacteriophage lambda MCQSRGVFVQDYNCHTPPKLTDRRIQMDAQTRRRERRAEKQAQWKAANPLLVGVSAKPVNRPILSLNRKPKSRVESALNPIDLTVLAEYHKQIESNLQRIERKNQRTWYSKPGERGITCSGRQKIKGKSIPLI BDCE204994A02DC5 clpp_ecoli ATP-dependent Clp protease proteolytic subunit clpP lopP Endopeptidase Clp Caseinolytic protease Protease Ti Heat shock protein F21.5 b0437 JW0427 protein protein ecoli Escherichia coli (strain K12) MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN DIP protein P0A6G7 original sequence version: 51 DIP protein P0A6G7 original sequence version: 96 A7843D036C8CB3C2 g_lambd Tail assembly protein G G Gene product G Minor tail protein G Tail assembly chaperone lambdap14 protein protein lambd Enterobacteria phage lambda Bacteriophage lambda MFLKTESFEHNGVTVTLSELSALQRIEHLALMKRQAEQAESDSNRKFTVEDAIRTGAFLVAMSLWHNHPQKTQMPSMNEAVKQIEQEVLTTWPTEAISHAENVVYRLSGMYEFVVNNAPEQTEDAGPAEPVSAGKCSTVS C50DA2AFD77D2313 nind_lambd Protein ninD ninD protein protein lambd Enterobacteria phage lambda Bacteriophage lambda MMRCYRCGESKEDNRFRPNQPYWNRWCLRCERTPTGVLPLPQEKEDVWRDSDEVSPT 1E975C1784E61DF6 c6zcx1_lambd Endolysin Lysis protein Lysozyme Transglycosylase protein protein lambd Enterobacteria phage lambda Bacteriophage lambda MVEINNQRKAFLDMLAWSEGTDNGRQKTRNHGYDVIVGGELFTDYSDHPRKLVTLNPKLKSTGAGRYQLLSRWWDAYRKQLGLKDFSPKSQDAVALQQIKERGALPMIDRGDIRQAIDRCSNIWASLPGAGYGQFEHKADSLIAKFKEAGGTVREIDV 94F8E9A512EAA03E c6zcz0_lambd Tape measure protein H Gene product H Minor tail protein H protein protein lambd Enterobacteria phage lambda Bacteriophage lambda MAEPVGDLVVDLSLDAARFDEQMARVRRHFSGTESDAKKTAAVVEQSLSRQALAAQKAGISVGQYKAAMRMLPAQFTDVATQLAGGQSPWLILLQQGGQVKDSFGGMIPMFRGLAGAITLPMVGATSLAVATGALAYAWYQGNSTLSDFNKTLVLSGNQAGLTADRMLVLSRAGQAAGLTFNQTSESLSALVKAGVSGEAQIASISQSVARFSSASGVEVDKVAEAFGKLTTDPTSGLTAMARQFHNVSAEQIAYVAQLQRSGDEAGALQAANEAATKGFDDQTRRLKENMGTLETWADRTARAFKSMWDAVLDIGRPDTAQEMLIKAEAAYKKADDIWNLRKDDYFVNDEARARYWDDREKARLALEAARKKAEQQTQQDKNAQQQSDTEASRLKYTEEAQKAYERLQTPLEKYTARQEELNKALKDGKILQADYNTLMAAAKKDYEATLKKPKQSSVKVSAGDRQEDSAHAALLTLQAELRTLEKHAGANEKISQQRRDLWKAESQFAVLEEAAQRRQLSAQEKSLLAHKDETLEYKRQLAALGDKVTYQERLNALAQQADKFAQQQRAKRAAIDAKSRGLTDRQAEREATEQRLKEQYGDNPLALNNVMSEQKKTWAAEDQLRGNWMAGLKSGWSEWEESATDSMSQVKSAATQTFDGIAQNMAAMLTGSEQNWRSFTRSVLSMMTEILLKQAMVGIVGSIGSAIGGAVGGGASASGGTAIQAAAAKFHFATGGFTGTGGKYEPAGIVHRGEFVFTKEATSRIGVGNLYRLMRGYATGGYVGTPGSMADSRSQASGTFEQNNHVVINNDGTNGQIGPAALKAVYDMARKGARDEIQTQMRDGGLFSGGGR BDC48EC298C2E04F soxs_ecoli Regulatory protein SoxS soxS b4062 JW4023 protein protein ecoli Escherichia coli (strain K12) MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 7341326FBAB819D6 mdtq_ecoli Putative multidrug resistance outer membrane protein MdtQ mdtQ yohG yohH b2138 JW5838/JW5358 b2139 protein protein ecoli Escherichia coli (strain K12) MNRDSFYPAIACFPLLLMLAGCAPMHETRQALSQQTPAAQVDTALPTALKMVGQTXQWWLEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSAEGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDELGYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQVQTLAEKNQHQAQIERDALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGGGYKR 32C92C44193C9CFF noha_ecoli Prophage DNA-packing protein NohA nohA Prophage Qin DNA-packaging protein Nu1 homolog nohQ JW1541 b1548 protein protein ecoli Escherichia coli (strain K12) MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNRADRQYAGGSRS DIP protein P31061 original sequence version: null FB5B1F844AB2C7C1 yehd_ecoli Uncharacterized fimbrial-like protein YehD yehD b2111 JW2098 protein protein ecoli Escherichia coli (strain K12) MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFEAGGDSVSINMPTVPTSVFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITNDKITGNDKAIASSNDTVGYYLYLGDNSDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLTDNSVQSGDVLSSLVMRVAQD EF91972EC1DE9CD6 rpos_ecoli RNA polymerase sigma factor RpoS Sigma-38 rpoS appR katF nur otsX sigS b2741 JW5437 Sigma S protein protein ecoli Escherichia coli (strain K12) MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEQEPSDNDLAEEELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE DIP protein P13445 original sequence version: 126 DIP protein P13445 original sequence version: null 4E6E675E4CA6BC6F nohd_ecoli DNA-packaging protein NU1 homolog nohD nohB JW0549 b0560 protein protein ecoli Escherichia coli (strain K12) MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG E38D4FBFF174751C c6zcv8_9caud protein protein 9CAUD_Lambda_1H12 Escherichia virus Lambda_1H12 MSNIKKYIIDYDWKASIEIEIDHDVMTEEKLHQINNFWSDSEYRLNKHGSVLNAVLIMLAQHALLIAISSDLNAYGVVCEFDWNDGNGQEGWPPMDGSEGIRITDIDTSGIFDSDDMTIKAA 9C51F65EE1118BE6 pric_ecoli Primosomal replication protein N'' priC b0467 JW0456 protein protein ecoli Escherichia coli (strain K12) MKTALLLEKLEGQLATLRQRCAPVSQFATLSARFDRHLFQTRATTLQACLDEAGDNLAALRHAVEQQQLPQVAWLAEHLAAQLEAIAREASAWSLREWDSAPPKIARWQRKRIQHQDFERRLREMVAERRARLARVTDLVEQQTLHREVEAYEARLARCRHALEKIENRLARLTR 6C735A9CAABB82B3 matp_ecoli Macrodomain Ter protein matP b0956 JW0939 ycbG protein protein ecoli Escherichia coli (strain K12) MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVLLSLENEPVLVNGWIDKHMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQRLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKQDLQALLGKE B2E971E41317CF31 minc_ecoli Septum site-determining protein MinC minC b1176 JW1165 protein protein ecoli Escherichia coli (strain K12) MSNTPIELKGSSFTLSVVHLHEAEPKVIHQALEDKIAQAPAFLKHAPVVLNVSALEDPVNWSAMHKAVSATGLRVIGVSGCKDAQLKAEIEKMGLPILTEGKEKAPRPAPTPQAPAQNTTPVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIADGNIHVYGMMRGRALAGASGDRETQIFCTNLMAELVSIAGEYWLSDQIPAEFYGKAARLQLVENALTVQPLN DIP protein P18196 original sequence version: 116 DIP protein P18196 original sequence version: 82 DIP protein P18196 original sequence version: null E4283A6AD850DAD0 dcrb_ecoli Inner membrane lipoprotein DcrB dcrB b3472 yhhR JW5682 protein protein ecoli Escherichia coli (strain K12) MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTDQSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNKAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENIINTLVIQ 8412B6A4028750B2 caif_ecoli Transcriptional activatory protein CaiF caiF b0034 JW0033 protein protein ecoli Escherichia coli (strain K12) MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR D2315E9DEBF976BD ydgh_ecoli Protein YdgH ydgH b1604 JW1596 protein protein ecoli Escherichia coli (strain K12) MKLKNTLLASALLSAMAFSVNAATELTPEQAAAVKPFDRVVVTGRFNAIGEAVKAVSRRADKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETSNRVINGVVELPKDQAVLIEPFDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDANQGGNQRITAFIYKKDAKKRIVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTASPSSEVGRFFETQSSKGGRYTVTLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTEVSYQVAKRAAKKGAKYYHITRQWQERGNNLTVSADLYK AFD788B9CC41971A q38267_lambd protein protein lambd Enterobacteria phage lambda Bacteriophage lambda MHKASSVELRTSIEMAHSLAQIGIRFVPIPVETDEEFHTLAASLSQKLEMMVAKAEADERNQV 470CE430334E54EB fhuf_ecoli Ferric iron reductase protein FhuF JW4331 yjjS fhuF b4367 protein protein ecoli Escherichia coli (strain K12) MAYRSAPLYEDVIWRTHLQPQDPTLAQAVRATIAKHREHLLEFIRLDEPAPLNAMTLAQWSSPNVLSSLLAVYSDHIYRNQPMMIRENKPLISLWAQWYIGLMVPPLMLALLTQEKALDVSPEHFHAEFHETGRVACFWVDVCEDKNATPHSPQHRMETLISQALVPVVQALEATGEINGKLIWSNTGYLINWYLTEMKQLLGEATVESLRHALFFEKTLTNGEDNPLWRTVVLRDGLLVRRTCCQRYRLPDVQQCGDCTLK 7708E776B1BE7783 mine_ecoli Cell division topological specificity factor minE b1174 JW1163 protein protein ecoli Escherichia coli (strain K12) MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRKDILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK 04DDFB4EA24F96C1 yjdi_ecoli Uncharacterized protein YjdI yjdI b4126 JW4087 protein protein ecoli Escherichia coli (strain K12) MDQALLDGGYRCYTGEKIDVYFNTAICQHSGNCVRGNGKLFNLKRKPWIMPDEVDVATVVKVIDTCPSGALKYRHK DIP protein P0AF59 original sequence version: 35 062C085C008C20AC proq_ecoli RNA chaperone ProQ proQ yebJ yobE yoeC JW5300 b1831 protein protein ecoli Escherichia coli (strain K12) MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVDRVAGEMNLSKTQLRSALRLYTSSWRYLYGVKPGATRVDLDGNPCGELDEQHVEHARKQLEEAKARVQAQRAEQQAKKREAAATAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQKPVEKAPKTVKAPREEQHTPVSDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLNSGMSLIVRAEHLVF 042BEAA345A3C739 regq_lambd Antitermination protein Q Q protein protein lambd Enterobacteria phage lambda Bacteriophage lambda MRLESVAKFHSPKSPMMSDSPRATASDSLSGTDVMAAMGMAQSQAGFGMAAFCGKHELSQNDKQKAINYLMQFAHKVSGKYRGVAKLEGNTKAKVLQVLATFAYADYCRSAATPGARCRDCHGTGRAVDIAKTELWGRVVEKECGRCKGVGYSRMPASAAYRAVTMLIPNLTQPTWSRTVKPLYDALVVQCHKEESIADNILNAVTR 12D4D3AF93DBACDB hcr_ecoli NADH oxidoreductase HCR hcr ybjV JW5117 b0872 protein protein ecoli Escherichia coli (strain K12) MTMPTNQCPWRMQVHHITQETPDVWTISLICHDYYPYRAGQYALVSVRNSAETLRAYTISSTPGVSEYITLTVRRIDDGVGSQWLTRDVKRGDYLWLSDAMGEFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVRVIYNVRTPQDVIFADEWRNYPVTLVAENNVTEGFIAGRLTRELLAGVPDLASRTVMTCGPAPYMDWVEQEVKALGVTRFFKEKFFTPVAEAATSGLKFTKLQPAREFYAPVGTTLLEALESNNVPVVAACRAGVCGCCKTKVVSGEYTVSSTMTLTDAEIAEGYVLACSCHPQGDLVLA 5138026DCBBD6A9C j7qz11_ecolx yliL BN17_06151 protein protein ecolx Escherichia coli MERGPHPRAAIYAGLQEDRASRRSGQLLTNKSFAKGIANPTKSGVFQTKTRYACMKAGVKRRTATPLFIGRFILLRFVVDHIAQHREQH D3BC770F7127109D yfcq_ecoli Uncharacterized fimbrial-like protein YfcQ yfcQ JW2331 b2334 protein protein ecoli Escherichia coli (strain K12) MRKTFLTLLCVSSAIAHAADEDITFHGTLLSPPTCSISGGKTIEVEFRDLIIDDINGNYGRKEVPYELTCDSTTRHPDWEMTLTWTGTQTSFNDAAIETDVPGFGIELQHDGQRFKLNTPLAINATDFTQKPKLEAVPVKASDAVLSDTNFSAYATLRVDYQ 2ED38E251AA3B73A syga_ecoli Glycine--tRNA ligase alpha subunit glyQ glyS(A) b3560 JW3531 Glycyl-tRNA synthetase alpha subunit protein protein ecoli Escherichia coli (strain K12) MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTCLRELGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSLKELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCNKDK DIP protein P00960 original sequence version: null 91E20623ADFD4DDB hycg_ecoli Formate hydrogenlyase subunit 7 Hydrogenase-3 component G hycG hevG b2719 JW2689 protein protein ecoli Escherichia coli (strain K12) MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHARGPGELDEQPAEILHGDMVQPLRVKVDREARRLAGYRYGRQIADDYLTQLGQGEEQVARWLEAENDPRLNEIVSHLNHVVEEARIR DIP protein P16433 original sequence version: null B24FBAE3C44F3A10 rs7_ecoli 30S ribosomal protein S7 rpsG Small ribosomal subunit protein uS7 JW3303 b3341 protein protein ecoli Escherichia coli (strain K12) MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYSALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRWLSLRSFSHQAGASSKQPALGYLN DIP protein P02359 original sequence version: null 8627DB380C4A9C0D c6zcy3_lambd protein protein lambd Enterobacteria phage lambda Bacteriophage lambda MTKDELIARLRSLGEQLNRDVSLTGTKEELALRVAELKEELDDTDETAGQDTPLSRENVLTGHENEVGSAQPDTVILDTSELVTVVALVKLHTDALHATRDEPVAFVLPGTAFRVSAGVAAEMTERGLARMQ 4D7640AC64A97BCA rmf_ecoli Ribosome modulation factor rmf Protein E JW0936 b0953 Hibernation factor RMF protein protein ecoli Escherichia coli (strain K12) MKRQKRDRLERAHQRGYQAGIAGRSKEMCPYQTLNQRSQWLGGWREAMADRVVMA D264AF285BBF24AB atpe_ecoli ATP synthase epsilon chain atpC papG uncC b3731 ATP synthase F1 sector epsilon subunit JW3709 F-ATPase epsilon subunit protein protein ecoli Escherichia coli (strain K12) MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRVIELTKKAM DIP protein P0A6E6 original sequence version: 66 5EFF7DE911745A62 bame_ecoli Outer membrane protein assembly factor BamE bamE smpA b2617 JW2598 protein protein ecoli Escherichia coli (strain K12) MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTANDVSKIRVGMTQQQVAYALGTPLMSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNIDNKPALSGN DIP protein P0A937 original sequence version: 75 DIP protein P0A937 original sequence version: 87 DIP protein P0A937 original sequence version: 88 CFD8840C014AA0A2 slp_ecoli Outer membrane protein Slp slp b3506 JW3474 protein protein ecoli Escherichia coli (strain K12) MNMTKGALILSLSFLLAACSSIPQNIKGNNQPDIQKSFVAVHNQPGLYVGQQARFGGKVINVINGKTDTLLEISVLPLDSYAKPDIEANYQGRLLARQSGFLDPVNYRNHFVTILGTIQGEQPGFINKVPYNFLEVNMQGIQVWHLREVVNTTYNLWDYGYGAFWPEPGWGAPYYTNAVSQVTPELVK B2CDBC40E05ADB30 eutn_ecoli Bacterial microcompartment vertex protein EutN eutN cchB yffY JW2440 b2456 Ethanolamine catabolic microcompartment shell protein EutN Ethanolamine utilization protein EutN protein protein ecoli Escherichia coli (strain K12) MKLAVVTGQIVCTVRHHGLAHDKLLMVEMIDPQGNPDGQCAVAIDNIGAGTGEWVLLVSGSSARQAHKSETSPVDLCVIGIVDEVVSGGQVIFHK C727E1EB4E1E4038 csra_ecoli Carbon storage regulator csrA zfiA b2696 JW2666 Translational dual regulator CsrA protein protein ecoli Escherichia coli (strain K12) MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKSQQSSY DIP protein P69913 original sequence version: 45 16308FC572670E1C rcnb_ecoli Nickel/cobalt homeostasis protein RcnB rcnB yohN JW5346 b2107 protein protein ecoli Escherichia coli (strain K12) MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIKAYDGEIFYHR DIP protein P64534 original sequence version: 31 C79685089608624F ybcw_ecoli Uncharacterized protein YbcW ybcW b0559 JW0548 protein protein ecoli Escherichia coli (strain K12) MNKEQSADDPSVDLIRVKNMLNSTISMSYPDVVIACIEHKVSLEAFRAIEAALVKHDNNMKDYSLVVD 7D0147A2EC229D06 fixb_ecoli Protein FixB yaaR fixB b0042 JW0041 protein protein ecoli Escherichia coli (strain K12) MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGAQAIQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR DIP protein P31574 original sequence version: null 443DBBD7F97EDE16 pyrf_ecoli Orotidine 5'-phosphate decarboxylase pyrF b1281 JW1273 OMP decarboxylase protein protein ecoli Escherichia coli (strain K12) MTLTASSSSRAVTNSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQRSA 556877A222F0F501 c6zcx6_9caud protein protein 9CAUD_Lambda_ev243 Escherichia phage Lambda_ev243 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELRQASEADLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGLPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG A25A5EAEF7BF18A4 sdia_ecoli Regulatory protein SdiA sdiA b1916 JW1901 protein protein ecoli Escherichia coli (strain K12) MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI C04CCC50C06135C4 vint_lambd Integrase int protein protein lambd Enterobacteria phage lambda Bacteriophage lambda MGRRRSHERRDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLTARINSDNSVTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHIDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK DIP protein P03700 original sequence version: 106 708D52B96E89209C j3jzz6-p33602 1 nuoG ECK2277 JW2278 b2283 NADH-quinone oxidoreductase, chain g 16 unspecified role unspecified role prey prey lambdap49 N 20 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK, pGBKC. c6zcx5-p64435 1 lambdap79 orf_79 5 unspecified role unspecified role bait bait ybcW ECK0551 JW0548 b0559 conserved hypothetical protein 59 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pDEST, pGBK, pGBKC. j3jzz6-p0aff6 1 nusA ECK3158 JW3138 b3169 transcription elongation protein NusA 18 unspecified role unspecified role prey prey lambdap49 N 20 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pDEST, pGBK, pGBKC. a-p31062 1 nohD ECK0552 JW0549 b0560 bacteriophage DNA packaging protein 31 unspecified role unspecified role prey prey lambdap02 A 14 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pDEST, pGBK, pGBKC. g-p0a6g7 1 clpP ECK0431 JW0427 b0437 ATP-dependent Clp protease, proteolytic subunit ClpP 21 unspecified role unspecified role prey prey lambdap14 G 22 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pDEST, pGBK, pGBKC. fi-p0aej8 1 lambdap09 Fi 51 unspecified role unspecified role bait bait eutN ECK2451 JW2440 b2456 Ethanolamine catabolic microcompartment shell protein 56 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK, pGBKC. q-q46855 1 yqhC ECK3002 JW5849 b3010 putative HTH-type transcriptional regulator YqhC 8 unspecified role unspecified role prey prey lambdap71 Q 44 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK, pGBKC. p-p0a6e6 1 atpC ECK3724 JW3709 b3731 ATP synthase F1, epsilon subunit 53 unspecified role unspecified role prey prey lambdap61 P 10 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK, pGBKC. p-p0a8n0 1 matP ECK0947 JW0939 b0956 protein YcbG 34 unspecified role unspecified role prey prey lambdap61 P 10 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK, pGBKC. a-p31061 1 lambdap02 A 14 unspecified role unspecified role bait bait nohQ ECK1541 JW1541 b1548 bacteriophage DNA packaging protein 28 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK, pGBKC. g-b7iyf4 1 lambdap14 G 22 unspecified role unspecified role bait bait yliL ECK0805 JW5969 b0816 b0816 hypothetical protein (yliL) {Escherichia coli W3110} 46 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK, pGBKC. g-p45577 1 lambdap14 G 22 unspecified role unspecified role bait bait proQ ECK1830 JW5300 b1831 ProP effector 43 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK, pGBKC. ea8_5-p0a734 1 lambdap36 ea8.5 7 unspecified role unspecified role bait bait minE ECK1162 JW1163 b1174 cell division topological specificity factor MinE 41 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. ea8_5-p0af59 1 yjdI ECK4119 JW4087 b4126 conserved hypothetical protein 42 unspecified role unspecified role prey prey lambdap36 ea8.5 7 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. ea8_5-p0aft8 1 lambdap36 ea8.5 7 unspecified role unspecified role bait bait yeiW ECK2164 JW5361 b4502 proteinase inhibitor 4 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. ea10-b7iyf4 1 lambdap45 ea10 32 unspecified role unspecified role bait bait yliL ECK0805 JW5969 b0816 b0816 hypothetical protein (yliL) {Escherichia coli W3110} 46 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. ea10-p02359 1 lambdap45 ea10 32 unspecified role unspecified role bait bait rpsG ECK3328 JW3303 b3341 ribosomal protein S7 50 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. ea10-p0a7l8 1 lambdap45 ea10 32 unspecified role unspecified role bait bait rpmA ECK3174 JW3152 b3185 ribosomal protein L27 11 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. ea10-p0a8n0 1 matP ECK0947 JW0939 b0956 protein YcbG 34 unspecified role unspecified role prey prey lambdap45 ea10 32 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. ea10-p0a9e2 1 lambdap45 ea10 32 unspecified role unspecified role bait bait soxS ECK4054 JW4023 b4062 regulatory protein SoxS 26 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. ea10-p0afw2 1 lambdap45 ea10 32 unspecified role unspecified role bait bait rmf ECK0944 JW0936 b0953 b0953 ribosome modulation factor (rmf) {Escherichia coli W3110} 52 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. ea10-p23862 1 priC ECK0461 JW0456 b0467 primosomal replication protein N 33 unspecified role unspecified role prey prey lambdap45 ea10 32 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. ea10-p75960 1 cobB ECK1106 JW1106 b1120 NAD-dependent deacetylase 13 unspecified role unspecified role prey prey lambdap45 ea10 32 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. r-p0ae58 1 caiF ECK0035 JW0033 b0034 transcriptional activatory protein CaiF 37 unspecified role unspecified role prey prey lambdap75 R 24 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. r-p39405 1 fhuF ECK4357 JW4331 b4367 ferric iron reductase protein FhuF 40 unspecified role unspecified role prey prey lambdap75 R 24 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. nu1-p0aee1 1 lambdap01 nu1 62 unspecified role unspecified role bait bait dcrB ECK3456 JW5682 b3472 protein DcrB 36 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. fi-p31574 1 lambdap09 Fi 51 unspecified role unspecified role bait bait fixB ECK0043 JW0041 b0042 protein FixB 60 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. h-b7iyf4 1 lambdap16 H 25 unspecified role unspecified role bait bait yliL ECK0805 JW5969 b0816 b0816 hypothetical protein (yliL) {Escherichia coli W3110} 46 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. h-p0aft8 1 yeiW ECK2164 JW5361 b4502 proteinase inhibitor 4 unspecified role unspecified role prey prey lambdap16 H 25 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. h-p33343 1 yehD ECK2104 JW2098 b2111 fimbrial protein 29 unspecified role unspecified role prey prey lambdap16 H 25 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. h-p33369 1 lambdap16 H 25 unspecified role unspecified role bait bait mdtQ ECK2132 JW5358 b2139 YohH 27 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. h-p76500 1 yfcQ ECK2328 JW2331 b2334 conserved hypothetical protein 47 unspecified role unspecified role prey prey lambdap16 H 25 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. j3jzz6-p0a8n0 1 lambdap49 N 20 unspecified role unspecified role bait bait matP ECK0947 JW0939 b0956 protein YcbG 34 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. j3jzz6-p0act2 1 envR ECK3251 JW3232 b3264 probable acrEF/envCD operon repressor 6 unspecified role unspecified role prey prey lambdap49 N 20 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. j3jzz6-p13445 1 lambdap49 N 20 unspecified role unspecified role bait bait rpoS ECK2736 JW5437 b2741 RNA polymerase sigma factor RpoS 30 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. j3jzz6-p18196 1 minC ECK1164 JW1165 b1176 septum site-determining protein MinC 35 unspecified role unspecified role prey prey lambdap49 N 20 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. j3jzz6-p75824 1 lambdap49 N 20 unspecified role unspecified role bait bait hcr ECK0863 JW5117 b0872 NADH oxidoreductase hcr 45 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. j3jzz6-p76270 1 lambdap49 N 20 unspecified role unspecified role bait bait msrC ECK1831 JW1821 b1832 protein YebR 19 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. q-p00960 1 glyQ ECK3548 JW3531 b3560 glycyl-tRNA synthetase, alpha subunit 48 unspecified role unspecified role prey prey lambdap71 Q 44 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. q-p67910 1 lambdap71 Q 44 unspecified role unspecified role bait bait hldD ECK3609 JW3594 b3619 ADP-L-glycero-D-manno-heptose-6-epimerase 9 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. q-p76079 1 paaC ECK1387 JW1385 b1390 phenylacetate-CoA oxygenase, PaaI subunit 17 unspecified role unspecified role prey prey lambdap71 Q 44 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. p-p19636 1 lambdap61 P 10 unspecified role unspecified role bait bait eutC ECK2435 JW2433 b2440 ethanolamine ammonia-lyase, light chain 12 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. int-p31062 1 nohD ECK0552 JW0549 b0560 bacteriophage DNA packaging protein 31 unspecified role unspecified role prey prey lambdap33 int 64 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. g-p64534 1 rcnB ECK2100 JW5346 b2107 conserved hypothetical protein 58 unspecified role unspecified role prey prey lambdap14 G 22 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. nind-p07026 1 lambdap65 NinD 23 unspecified role unspecified role bait bait sdiA ECK1915 JW1901 b1916 regulatory protein SdiA 63 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. nind-p08244 1 lambdap65 NinD 23 unspecified role unspecified role bait bait pyrF ECK1276 JW1273 b1281 orotidine 5'-phosphate decarboxylase 61 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. nind-p0a734 1 minE ECK1162 JW1163 b1174 cell division topological specificity factor MinE 41 unspecified role unspecified role prey prey lambdap65 NinD 23 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. nind-p0a937 1 lambdap65 NinD 23 unspecified role unspecified role bait bait bamE ECK2613 JW2598 b2617 small protein A 54 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. nind-p0a9e2 1 soxS ECK4054 JW4023 b4062 regulatory protein SoxS 26 unspecified role unspecified role prey prey lambdap65 NinD 23 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. nind-p0af59 1 lambdap65 NinD 23 unspecified role unspecified role bait bait yjdI ECK4119 JW4087 b4126 conserved hypothetical protein 42 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. nind-p16433 1 lambdap65 NinD 23 unspecified role unspecified role bait bait HycG ECK2714 JW2689 b2719 hydrogenase-4 component I 49 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. nind-p37194 1 slp ECK3490 JW3474 b3506 outer membrane protein slp 55 unspecified role unspecified role prey prey lambdap65 NinD 23 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. nind-p45766 1 yhdW ECK3255 JW3236 b3268 general L-amino acid-binding periplasmic protein AapJ 3 unspecified role unspecified role prey prey lambdap65 NinD 23 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. nind-p69913 1 lambdap65 NinD 23 unspecified role unspecified role bait bait csrA ECK2691 JW2666 b2696 carbon storage regulator 57 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. nind-p76270 1 msrC ECK1831 JW1821 b1832 protein YebR 19 unspecified role unspecified role prey prey lambdap65 NinD 23 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBK. fi-p0a734 1 lambdap09 Fi 51 unspecified role unspecified role bait bait minE ECK1162 JW1163 b1174 cell division topological specificity factor MinE 41 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBKC. fi-p76177 1 ydgH ECK1599 JW1596 b1604 protein YdgH 38 unspecified role unspecified role prey prey lambdap09 Fi 51 unspecified role unspecified role bait bait physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBKC. p-q46855 1 lambdap61 P 10 unspecified role unspecified role bait bait yqhC ECK3002 JW5849 b3010 putative HTH-type transcriptional regulator YqhC 8 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBKC. g-p0aaj5 1 lambdap14 G 22 unspecified role unspecified role bait bait fdoH ECK3886 JW3864 b3893 formate dehydrogenase, beta subunit 15 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBKC. g-p39163 1 lambdap14 G 22 unspecified role unspecified role bait bait chaC ECK1212 JW1209 b1218 cation transport protein ChaC 2 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBKC. g-p39405 1 lambdap14 G 22 unspecified role unspecified role bait bait fhuF ECK4357 JW4331 b4367 ferric iron reductase protein FhuF 40 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBKC. q38267-q46855 1 lambdap38 orf63 39 unspecified role unspecified role bait bait yqhC ECK3002 JW5849 b3010 putative HTH-type transcriptional regulator YqhC 8 unspecified role unspecified role prey prey physical association physical association Table 4, suppl. table S1 Interaction found using the following vector systems: pGBKC.