DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ hall-2012-4 ecolx Escherichia coli ion mobility mass spec ion mobility mass spectrometry of complexes ion mobility mass spec predetermined predetermined participant predetermined Hall Z., Politis A., Robinson CV. DIP original experiment: DIP-250518X Structure (London, England : 1993) 2012 IMEx Structural modeling of heteromeric protein complexes from disassembly pathways and ion mobility-mass spectrometry. Hall Z., Politis A., Robinson CV. Only protein-protein interactions imex curation hall-2012-9 ecolx Escherichia coli ion mobility mass spec ion mobility mass spectrometry of complexes ion mobility mass spec predetermined predetermined participant predetermined Hall Z., Politis A., Robinson CV. DIP original experiment: DIP-250517X Structure (London, England : 1993) 2012 IMEx Structural modeling of heteromeric protein complexes from disassembly pathways and ion mobility-mass spectrometry. Hall Z., Politis A., Robinson CV. Only protein-protein interactions imex curation hall-2013-6 ecolx Escherichia coli ion mobility mass spec ion mobility mass spectrometry of complexes ion mobility mass spec predetermined predetermined participant predetermined Hall Z., Hernández H., Marsh JA., Teichmann SA., Robinson CV. DIP original experiment: DIP-254624X Structure (London, England : 1993) 2013 IMEx The role of salt bridges, charge density, and subunit flexibility in determining disassembly routes of protein complexes. Hall Z., Hernández H., Marsh JA., Teichmann SA., Robinson CV. Only protein-protein interactions imex curation q8rtl4_9burk nbzAc protein protein comsp Comamonas sp. JS765 MSYQNLVSEAGLTQKLLIHGDKELFQHELKTIFARNWLFLTHDSLIPSPGDYVKAKMGVDEVIVSRQNDGSVRAFLNVCRHRGKTLVHAEAGNAKGFVCGYHGWGYGSNGELQSVPFEKELYGDAIKKKCLGLKEVPRIESFHGFIYGCFDAEAPPLIDYLGDAAWYLEPTFKYSGGLELVGPPGKVVVKANWKSFAENFVGDGYHVGWTHAAALRAGQSVFSSIAGNAKLPPEGAGLQMTSKYGSGMGVFWGYYSGNFSADMIPDLMAFGAAKQEKLAKEIGDVRARIYRSFLNGTIFPNNSFLTGSAAFRVWNPIDENTTEVWTYAFVEKDMPEDLKRRVADAVQRSIGPAGFWESDDNENMETMSQNGKKYQSSNIDQIASLGFGKDVYGDECYPGVVGKSAIGETSYRGFYRAYQAHISSSNWAEFENASRNWHIEHTKTTDR q8rtl3_9burk nbzAd protein protein comsp Comamonas sp. JS765 MMINTQEDKLVSAHDAEEFHRFFVGHDSDLQQEVTTLLTREAHLLDIQAYKAWLEHFVAPEIKYQVISRELRSTSERRYQLNDAVNLYNENYQQLKVRVEHQMDPQNWANNPKIRFTRFVTNVTAAKDKSAPEILHVRSNLILHRARRENQVDVFYATREDKWKRIEGGGIKLVERFVDYPERIPQTHNLLVFL nbzad-1 3243025 N/A 3243038 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false nbzac-nbzad-5 3243030 N/A 3243038 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli N/A 3243044 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false nbzac-nbzad-6 3255654 N/A 3243038 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli N/A 3243044 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false IntAct European Bioinformatics Institute IntAct intact http://www.ebi.ac.uk/ http://www.ebi.ac.uk/intact/query/${ac} EBI-[0-9]+|IA:[0-9]+ INTerAction database (IntAct) provides an open source database and toolkit for the storage, presentation and analysis of molecular interactions. http://www.ebi.ac.uk/intact European Bioinformatics Institute; Wellcome Trust Genome Campus; Hinxton, Cambridge; CB10 1SD; United Kingdom http://www.ebi.ac.uk/intact/ http://www.ebi.ac.uk/ friemann-2005-1 Structural insight into the dioxygenation of nitroarene compounds: the crystal structure of nitrobenzene dioxygenase. in vitro In vitro x-ray diffraction x-ray crystallography X-ray X-ray x-ray diffraction predetermined predetermined participant predetermined Friemann R., Ivkovic-Jensen MM., Lessner DJ., Yu CL., Gibson DT., Parales RE., Eklund H., Ramaswamy S. PDBe - Data obtained from the Protein Data Bank Europe rosie@xray.bmc.uu.se J. Mol. Biol. (0022-2836) 2005 q8rtl4_9burk nbzAc protein protein comsp Comamonas sp. JS765 MSYQNLVSEAGLTQKLLIHGDKELFQHELKTIFARNWLFLTHDSLIPSPGDYVKAKMGVDEVIVSRQNDGSVRAFLNVCRHRGKTLVHAEAGNAKGFVCGYHGWGYGSNGELQSVPFEKELYGDAIKKKCLGLKEVPRIESFHGFIYGCFDAEAPPLIDYLGDAAWYLEPTFKYSGGLELVGPPGKVVVKANWKSFAENFVGDGYHVGWTHAAALRAGQSVFSSIAGNAKLPPEGAGLQMTSKYGSGMGVFWGYYSGNFSADMIPDLMAFGAAKQEKLAKEIGDVRARIYRSFLNGTIFPNNSFLTGSAAFRVWNPIDENTTEVWTYAFVEKDMPEDLKRRVADAVQRSIGPAGFWESDDNENMETMSQNGKKYQSSNIDQIASLGFGKDVYGDECYPGVVGKSAIGETSYRGFYRAYQAHISSSNWAEFENASRNWHIEHTKTTDR q8rtl3_9burk nbzAd protein protein comsp Comamonas sp. JS765 MMINTQEDKLVSAHDAEEFHRFFVGHDSDLQQEVTTLLTREAHLLDIQAYKAWLEHFVAPEIKYQVISRELRSTSERRYQLNDAVNLYNENYQQLKVRVEHQMDPQNWANNPKIRFTRFVTNVTAAKDKSAPEILHVRSNLILHRARRENQVDVFYATREDKWKRIEGGGIKLVERFVDYPERIPQTHNLLVFL nbzac-nbzad-1 The crystal structure of nitrobenzene dioxygenase 515802 N/A 515803 unspecified role unspecified role neutral component neutral component region sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain false ecoli Escherichia coli (strain K12) Stoichiometry: 1.0 N/A 515804 unspecified role unspecified role neutral component neutral component region sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain false ecoli Escherichia coli (strain K12) Stoichiometry: 1.0 direct interaction direct interaction false false false hexameric, multimeric working 84.400%, free 82.800% 1.2A nbzac-nbzad-2 The crystal structure of nitrobenzene dioxygenase in complex with nitrobenzene 515802 N/A 515804 unspecified role unspecified role neutral component neutral component region sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain false ecoli Escherichia coli (strain K12) Stoichiometry: 1.0 N/A 515803 unspecified role unspecified role neutral component neutral component region sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain false ecoli Escherichia coli (strain K12) Stoichiometry: 1.0 direct interaction direct interaction false false false hexameric, multimeric working 83.300%, free 80.800% 1.55A nbzac-nbzad-3 The crystal structure of nitrobenzene dioxygenase in complex with 3-nitrotoluene 515802 N/A 515804 unspecified role unspecified role neutral component neutral component region sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain false ecoli Escherichia coli (strain K12) Stoichiometry: 1.0 N/A 515803 unspecified role unspecified role neutral component neutral component region sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain false ecoli Escherichia coli (strain K12) Stoichiometry: 1.0 direct interaction direct interaction false false false hexameric, multimeric working 83.100%, free 80.900% 1.5A