DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ qian-2018-2 blavi blavi Rhodopseudomonas viridis 3d-em 3D electron microscopy 3D-EM electron tomog structure determination identification by structure determination identification by structure determination structure determination Qian P., Siebert CA., Wang P., Canniffe DP., Hunter CN. c.n.hunter@sheffield.ac.uk Nature 2018 imex curation Only protein-protein interactions imex curation deisenhofer-1995-1 blavi blavi Rhodopseudomonas viridis x-ray diffraction x-ray crystallography X-ray X-ray x-ray diffraction structure determination identification by structure determination identification by structure determination structure determination Deisenhofer J., Epp O., Sinning I., Michel H. Journal of molecular biology 1995 imex curation Only protein-protein interactions imex curation rcel_blavi Reaction center protein L chain pufL Photosynthetic reaction center L subunit protein protein blavi blavi Rhodopseudomonas viridis MALLSFERKYRVRGGTLIGGDLFDFWVGPYFVGFFGVSAIFFIFLGVSLIGYAASQGPTWDPFAISINPPDLKYGLGAAPLLEGGFWQAITVCALGAFISWMLREVEISRKLGIGWHVPLAFCVPIFMFCVLQVFRPLLLGSWGHAFPYGILSHLDWVNNFGYQYLNWHYNPGHMSSVSFLFVNAMALGLHGGLILSVANPGDGDKVKTAEHENQYFRDVVGYSIGALSIHRLGLFLASNIFLTGAFGTIASGPFWTRGWPEWWGWWLDIPFWS rceh_blavi Reaction center protein H chain puhA Photosynthetic reaction center H subunit protein protein blavi blavi Rhodopseudomonas viridis MYHGALAQHLDIAQLVWYAQWLVIWTVVLLYLRREDRREGYPLVEPLGLVKLAPEDGQVYELPYPKTFVLPHGGTVTVPRRRPETRELKLAQTDGFEGAPLQPTGNPLVDAVGPASYAERAEVVDATVDGKAKIVPLRVATDFSIAEGDVDPRGLPVVAADGVEAGTVTDLWVDRSEHYFRYLELSVAGSARTALIPLGFCDVKKDKIVVTSILSEQFANVPRLQSRDQITLREEDKVSAYYAGGLLYATPERAESLL cycr_blavi Photosynthetic reaction center cytochrome c subunit pufC Cytochrome c558/c559 cytC BVIRIDIS_00500 protein protein blavi blavi Rhodopseudomonas viridis MKQLIVNSVATVALASLVAGCFEPPPATTTQTGFRGLSMGEVLHPATVKAKKERDAQYPPALAAVKAEGPPVSQVYKNVKVLGNLTEAEFLRTMTAITEWVSPQEGCTYCHDENNLASEAKYPYVVARRMLEMTRAINTNWTQHVAQTGVTCYTCHRGTPLPPYVRYLEPTLPLNNRETPTHVERVETRSGYVVRLAKYTAYSALNYDPFTMFLANDKRQVRVVPQTALPLVGVSRGKERRPLSDAYATFALMMSISDSLGTNCTFCHNAQTFESWGKKSTPQRAIAWWGIRMVRDLNMNYLAPLNASLPASRLGRQGEAPQADCRTCHQGVTKPLFGASRLKDYPELGPIKAAAK lha_blavi Light-harvesting protein B-1015 alpha chain pufA Antenna pigment protein alpha chain protein protein blavi blavi Rhodopseudomonas viridis MATEYRTASWKLWLILDPRRVLTALFVYLTVIALLIHFGLLSTDRLNWWEFQRGLPKAASLVVVPPAVG lhg_blavi Light-harvesting protein B-1015 gamma chain protein protein blavi blavi Rhodopseudomonas viridis YFAADGSVVPSISDWNLWVPLGILGIPTIWIALTYR lhb_blavi Light-harvesting protein B-1015 beta chain pufB Antenna pigment protein beta chain protein protein blavi blavi Rhodopseudomonas viridis MADLKPSLTGLTEEEAKEFHGIFVTSTVLYLATAVIVHYLVWTARPWIAPIPKGWVNLEGVQSALSYLV rcem_blavi Reaction center protein M chain pufM Photosynthetic reaction center M subunit protein protein blavi blavi Rhodopseudomonas viridis MADYQTIYTQIQARGPHITVSGEWGDNDRVGKPFYSYWLGKIGDAQIGPIYLGASGIAAFAFGSTAILIILFNMAAEVHFDPLQFFRQFFWLGLYPPKAQYGMGIPPLHDGGWWLMAGLFMTLSLGSWWIRVYSRARALGLGTHIAWNFAAAIFFVLCIGCIHPTLVGSWSEGVPFGIWPHIDWLTAFSIRYGNFYYCPWHGFSIGFAYGCGLLFAAHGATILAVARFGGDREIEQITDRGTAVERAALFWRWTIGFNATIESVHRWGWFFSLMVMVSASVGILLTGTFVDNWYLWCVKHGAAPDYPAYLPATPDPASLPGAPK lhg_blavi-pufa-1 3466807 N/A 3466808 unspecified role unspecified role neutral component neutral component purified purified blavi blavi Rhodopseudomonas viridis Stoichiometry: 17.0 N/A 3466809 unspecified role unspecified role neutral component neutral component purified purified blavi blavi Rhodopseudomonas viridis Stoichiometry: 16.0 N/A 3466810 unspecified role unspecified role neutral component neutral component purified purified blavi blavi Rhodopseudomonas viridis Stoichiometry: 17.0 N/A 3466811 unspecified role unspecified role neutral component neutral component purified purified blavi blavi Rhodopseudomonas viridis Stoichiometry: 1.0 N/A 3466812 unspecified role unspecified role neutral component neutral component purified purified blavi blavi Rhodopseudomonas viridis Stoichiometry: 1.0 N/A 3466813 unspecified role unspecified role neutral component neutral component purified purified blavi blavi Rhodopseudomonas viridis Stoichiometry: 1.0 N/A 3466814 unspecified role unspecified role neutral component neutral component purified purified blavi blavi Rhodopseudomonas viridis Stoichiometry: 1.0 physical association physical association false false false Figure 1 pufc-pufl-1 3440765 N/A 3466811 unspecified role unspecified role neutral component neutral component purified purified blavi blavi Rhodopseudomonas viridis Stoichiometry: 1.0 N/A 3466812 unspecified role unspecified role neutral component neutral component purified purified blavi blavi Rhodopseudomonas viridis Stoichiometry: 1.0 N/A 3466813 unspecified role unspecified role neutral component neutral component purified purified blavi blavi Rhodopseudomonas viridis Stoichiometry: 1.0 N/A 3466814 unspecified role unspecified role neutral component neutral component purified purified blavi blavi Rhodopseudomonas viridis Stoichiometry: 1.0 physical association physical association false false false Figure 4