DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ sun-2018-1 rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis 3d-em 3D electron microscopy 3D-EM electron tomog structure determination identification by structure determination identification by structure determination structure determination Sousa JS., Calisto F., Langer JD., Mills DJ., Refojo PN., Teixeira M., Kühlbrandt W., Vonck J., Pereira MM. mpereira@itqb.unl.pt Nature communications 2018 imex curation Only protein-protein interactions imex curation sousa-2018-1 rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis chromatography chromatography technology column chromatography chromatography weight by comassie molecular weight estimation by coomasie staining weight by comassie Sousa JS., Calisto F., Langer JD., Mills DJ., Refojo PN., Teixeira M., Kühlbrandt W., Vonck J., Pereira MM. mpereira@itqb.unl.pt Nature communications 2018 imex curation Only protein-protein interactions imex curation d0mkf0_rhom4 Rmar_1979 protein protein rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis MKRYPGLIGLLVVLVSVAGCRFYGYPGGVALTLAQIEAASEQVAQDLEQALAELEALRLLARRDETLAPYVAQYEAILEAHQQAVLEFEHWKEQVAAHPGDYRRANRTLGAITARHEALLQQYADVAWAVAQHVNPALLARAYTSSGPRFFFYVVPPQYARQVNEQAVPPLQVVRYLAAQLS d0mdd9_rhom4 Rmar_0226 protein protein rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis MAEVKANGFPGWLLDPLRPTREKAEPRYRLPEDVRIWAVPLAIGVGLLIVSLVGWAIDARQFYFSYLVGWTFCLTLALGSLFFVMIQHLTRAQWVVAVRRLPEALVWTFPVLIVLFIPILFGLHDLYHWTHHELYDPSSPEYDPILAGKHAYLNVPFFLVRIAFYFFIWTLLAYKLYTLSVRQDVDPDPSIPAQQRKVSAWGMPLYGVTVAFASYDFLMSLDPHWYSTIFGVYFFAGSFFVALGFITTCYAILVRRGTLQGIVRAPHFQDLGKLMFGFTAFWAYIAFSQYMLIWYGNLPEETLWYRHRLEHGWEVLSQVLIWGHFVLPFLILLPWAAKRTPVLVGTMGIWFAIIHWIDLFWVAMPVLHTEHMTFHWLDVTCWLGLFGVVVGLFFYRISRHSLVPQNDPYLARSLALH d0mdd8_rhom4 Rmar_0225 protein protein rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis MQNITAMPRTIWTGLLLGLLLAGCRGMISSKPPVHPNLNMDFQEKFEAQELNPFFADRRAMRPPVPGTVPRGLLKEDTPFYFGKTADGAYVERIPVAVTPELVARGRERYNIYCAVCHGQAGDGQGIIMRGNYGYTPAPSFHDDRLRNVEDGYIFDVISHGVRNMPAYGHQIPVADRWAIVAYVRALQRSQHATAADVPEEVRARLQGE d0mdd7_rhom4 Rmar_0224 protein protein rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis MLKELLRSLKASMGIYEARDGSIYGLLAEFSDPAALLHAARQVRKAGYRHFDAHSPFPIHGMDEAMGLGNSKVAFITFFTGTIAGFALAWWMQWWMGAVDYPLNISGKPFFALPPSVPIIFELTILFSALAGVATMLALNGLPRPYNPLFYSKNFMRVTDDGFFLFVAASDPKFDPTATRQLLEQLGGYNIEVIEDRGEEDVTPATAPAAEAAVTTS d0mdd6_rhom4 Rmar_0223 protein protein rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis MAHATKDLSALARTDEEVLVQGGLTFHDITELVAQHTEKKTPKAWWAAFSVAFLGMLTLVAMLAYQVWNGVGVWGNNIPVGWGWPIVNFVFWVGIGHAGTLISAILFLFRQRWRTSINRAAEAMTIFAVICALIFPTFHVGRVWAIYWTLPIPNQMEMWPQFKSPLLWDVFAVSSYFIVSLVFWYVGLIPDLATLRDRAALMGRRLRAKILGFFALGWCGANRHWRNYEKVYMLLAGLATPLVLSVHSVVSFDFAVSIIPGWHTTIFPPYFVAGAIFSGFAMVVTLMVIARKAYGLENVITIDHLEKMNIIMLVTGTMVGFAYITEFFIAWYSGVPYEQYAFINRATGPYAWAYWTMMSCNLIFPQFFWIKKLRRNIPFMFIASIVVNIGMWFERFVITITSLHRDYLPSSWDYFVPTWVDVLTLIGSFGLFFTLFLLFLRFVPMVAIAEVKGVLPEADPHFYETHGDGHSRPAEVQVNRGRSS d0mdd5_rhom4 Rmar_0222 protein protein rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis MIELPVVNPDGAETPGSGKRLWRSTADLRRDPEWVKLAHDEFMPGVAEPPSGTSRRQFLQIMGASMALAGLTACRRPVEKILPYVRQPEEIIPGIPLYYATAMPFRGSVRPLLVESHEGRPTKIEGNPDHPLSRGATGVFEQASLLNLYDPDRSQQVLRKGEPASWGDFVQFARSLAAEAGTKRLAVLCEPSSSPTLAALRRELERRYAQVRWVTYRPEGDDHEALGLQQAFGRPVRARYRFSEARVIVSLDADFLGPTDRNFVENTREFAASRRMERPEDEISRLYVIESTYTVTGGMADHRLRLRAGDIPAFAAALAAELGVGELREAGARFAGHPYVVEIARDLRAAGARGVVLAGETQPPAVHALCAVINDLLGSLGRTVILHALDEPATAQHAALAELVQAMQAGAVDALLLLNVNPVYDAPAALGFAEALAQVPEVIHLGLHVDETARRSTWHLPSTHYLEAWGDGRAYDGTLSVIQPLIAPLYEAAHSPLEVLALLATGEEQSAYDLVRNTWRRLLAGRGAFEQAWQRVLHDGFLPDSGYPTVSLRPNRQALADWPQAAEGGLEVVFRLDPTVLDGSFANNAWAQELPDPITKIVWDNVAILSPKTAAALGVKAEYHKGVYIADVIELSLDGRAVELPVWVLPGHPDDSITVYLGYGREITSTRPERKTPFFDLDDYTDIYGHGAIATGVGVNVAPLRRPDNTWVAYGAQVRKTGRTYKIVTTQDHGSMVGRPLVRLATVEEFRKNPDFAKEAEPPLEGLEPWDQYPTLWEENHPSKQPAFQDSDYYRNQWAMVIDLNACTGCNACIVACDSENNIPMVGKNEVGRGREMHWLRIDRYFVSDEAHADDPQIVVQPVPCMHCENAPCESVCPVAATVHSPDGLNEMVYNRCIGTRYCSNNCPYKVRRFNWFNWVKTLPIQVQMAQNPDVTVRFRGVMEKCTYCVQRIREAQRQANIEKRPLRDGEVKTACQQACPAEAITFGDLNDPNNAVVKQRQNARRYEMLAALNVKPRTSYLARITNPNPRLLEQEPVA d0mdd4_rhom4 Rmar_0221 protein protein rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis MPQIFSRKTNRLPALSLAGSVFGGVLAVFLVWYYFSPEFYEVGYAPPYSHRIHVGKLGLDCRYCHNWVEVSDKANIPPTQTCINCHSQILTDSPRLQAVRDSWATDRSIEWVKVHHLPDYAHFSHASHVNNGVGCETCHGRIDQMDVVRLVEPLSMGWCLECHRQPELYLRPQSEITTMGYQPPADYIERNLERIRKEGIRPPTNCSACHY d0mdd4_rhom4-d0mdd5_rhom4-1 3471046 N/A 3471048 unspecified role unspecified role neutral component neutral component purified purified rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis Stoichiometry: 1.0 N/A 3471049 unspecified role unspecified role neutral component neutral component purified purified rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis Stoichiometry: 1.0 N/A 3471050 unspecified role unspecified role neutral component neutral component purified purified rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis Stoichiometry: 1.0 N/A 3471051 unspecified role unspecified role neutral component neutral component purified purified rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis Stoichiometry: 1.0 N/A 3471052 unspecified role unspecified role neutral component neutral component purified purified rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis Stoichiometry: 1.0 N/A 3471053 unspecified role unspecified role neutral component neutral component purified purified rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis Stoichiometry: 1.0 N/A 3471054 unspecified role unspecified role neutral component neutral component purified purified rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis Stoichiometry: 1.0 physical association physical association false false false Figure 1 d0mdd4_rhom4-d0mdd5_rhom4-2 3471047 N/A 3471048 unspecified role unspecified role neutral component neutral component purified purified rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis N/A 3471049 unspecified role unspecified role neutral component neutral component purified purified rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis N/A 3471050 unspecified role unspecified role neutral component neutral component purified purified rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis N/A 3471051 unspecified role unspecified role neutral component neutral component purified purified rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis N/A 3471052 unspecified role unspecified role neutral component neutral component purified purified rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis N/A 3471054 unspecified role unspecified role neutral component neutral component purified purified rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis N/A 3471053 unspecified role unspecified role neutral component neutral component purified purified rhom4 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) Rhodothermus obamensis physical association physical association false false false Supplementary Figure 1