DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ abe-2015-1 in vitro In vitro pull down pull down weight by comassie molecular weight estimation by coomasie staining weight by comassie Abe J., Hiyama TB., Mukaiyama A., Son S., Mori T., Saito S., Osako M., Wolanin J., Yamashita E., Kondo T., Akiyama S. DIP original experiment: DIP-266283X Science (New York, N.Y.) 2015 IMEx Circadian rhythms. Atomic-scale origins of slowness in the cyanobacterial circadian clock. Abe J., Hiyama TB., Mukaiyama A., Son S., Mori T., Saito S., Osako M., Wolanin J., Yamashita E., Kondo T., Akiyama S. Only protein-protein interactions imex curation abe-2015-2 in vitro In vitro pull down pull down weight by comassie molecular weight estimation by coomasie staining weight by comassie Abe J., Hiyama TB., Mukaiyama A., Son S., Mori T., Saito S., Osako M., Wolanin J., Yamashita E., Kondo T., Akiyama S. DIP original experiment: DIP-266284X Science (New York, N.Y.) 2015 IMEx Circadian rhythms. Atomic-scale origins of slowness in the cyanobacterial circadian clock. Abe J., Hiyama TB., Mukaiyama A., Son S., Mori T., Saito S., Osako M., Wolanin J., Yamashita E., Kondo T., Akiyama S. Only protein-protein interactions imex curation abe-2015-3 in vitro In vitro x-ray diffraction x-ray crystallography X-ray X-ray x-ray diffraction predetermined predetermined participant predetermined Abe J., Hiyama TB., Mukaiyama A., Son S., Mori T., Saito S., Osako M., Wolanin J., Yamashita E., Kondo T., Akiyama S. DIP original experiment: DIP-266285X Science (New York, N.Y.) 2015 IMEx Circadian rhythms. Atomic-scale origins of slowness in the cyanobacterial circadian clock. Abe J., Hiyama TB., Mukaiyama A., Son S., Mori T., Saito S., Osako M., Wolanin J., Yamashita E., Kondo T., Akiyama S. Only protein-protein interactions imex curation kaia_syne7 Circadian clock protein KaiA see0009 kaiA Synpcc7942_1218 protein protein syne7 Synechococcus elongatus (strain PCC 7942) Anacystis nidulans R2 MLSQIAICIWVESTAILQDCQRALSADRYQLQVCESGEMLLEYAQTHRDQIDCLILVAANPSFRAVVQQLCFEGVVVPAIVVGDRDSEDPDEPAKEQLYHSAELHLGIHQLEQLPYQVDAALAEFLRLAPVETMADHIMLMGANHDPELSSQQRDLAQRLQERLGYLGVYYKRDPDRFLRNLPAYESQKLHQAMQTSYREIVLSYFSPNSNLNQSIDNFVNMAFFADVPVTKVVEIHMELMDEFAKKLRVEGRSEDILLDYRLTLIDVIAHLCEMYRRSIPRET kaic_syne7 Circadian clock protein kinase KaiC see0011 kaiC Synpcc7942_1216 protein protein syne7 Synechococcus elongatus (strain PCC 7942) Anacystis nidulans R2 MTSAEMTSPNNNSEHQAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLRGTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSITDSHISTITDTIILLQYVEIRGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNFERIISGSPTRITVDEKSELSRIVRGVQEKGPES kaib_syne7 Circadian clock protein KaiB kaiB see0010 Synpcc7942_1217 protein protein syne7 Synechococcus elongatus (strain PCC 7942) Anacystis nidulans R2 MSPRKTYILKLYVAGNTPNSVRALKTLKNILEVEFQGVYALKVIDVLKNPQLAEEDKILATPTLAKVLPLPVRRIIGDLSDREKVLIGLDLLYGELQDSDDF kaic-kaia-10 3280219 N/A 3280222 unspecified role unspecified role prey prey ecolx Escherichia coli N/A 3280223 unspecified role unspecified role bait bait His-tag His-tag his tag his tag Hexa-His-tag 6-His-tag Histidine-tag Hexa-His-tag Histidine-tag 6-His-tag n-term range n-terminal range n-term range n-term range n-terminal range n-term range false ecolx Escherichia coli direct interaction direct interaction false false false kaic-kaib-5 3280220 N/A 3280224 unspecified role unspecified role prey prey ecolx Escherichia coli N/A 3280223 unspecified role unspecified role bait bait His-tag His-tag his tag his tag Hexa-His-tag 6-His-tag Histidine-tag Hexa-His-tag Histidine-tag 6-His-tag n-term range n-terminal range n-term range n-term range n-terminal range n-term range false ecolx Escherichia coli direct interaction direct interaction false false false kaic-5 3280221 N/A 3280223 unspecified role unspecified role unspecified role unspecified role Region 1-253 Region 1-253 sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli direct interaction direct interaction false false false