DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ takala-2014-1 ecolx Escherichia coli x-ray diffraction x-ray crystallography X-ray X-ray x-ray diffraction predetermined predetermined participant predetermined Takala H., Björling A., Berntsson O., Lehtivuori H., Niebling S., Hoernke M., Kosheleva I., Henning R., Menzel A., Ihalainen JA., Westenhoff S. DIP original experiment: DIP-260846X Nature 2014 IMEx Signal amplification and transduction in phytochrome photosensors. Takala H., Björling A., Berntsson O., Lehtivuori H., Niebling S., Hoernke M., Kosheleva I., Henning R., Menzel A., Ihalainen JA., Westenhoff S. Only protein-protein interactions imex curation takala-2014-2 ecolx Escherichia coli saxs x ray scattering saxs predetermined predetermined participant predetermined Takala H., Björling A., Berntsson O., Lehtivuori H., Niebling S., Hoernke M., Kosheleva I., Henning R., Menzel A., Ihalainen JA., Westenhoff S. DIP original experiment: DIP-260847X Nature 2014 IMEx Signal amplification and transduction in phytochrome photosensors. Takala H., Björling A., Berntsson O., Lehtivuori H., Niebling S., Hoernke M., Kosheleva I., Henning R., Menzel A., Ihalainen JA., Westenhoff S. Only protein-protein interactions imex curation takala-2014-3 ecolx Escherichia coli molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column predetermined predetermined participant predetermined Takala H., Björling A., Berntsson O., Lehtivuori H., Niebling S., Hoernke M., Kosheleva I., Henning R., Menzel A., Ihalainen JA., Westenhoff S. DIP original experiment: DIP-260848X Nature 2014 IMEx Signal amplification and transduction in phytochrome photosensors. Takala H., Björling A., Berntsson O., Lehtivuori H., Niebling S., Hoernke M., Kosheleva I., Henning R., Menzel A., Ihalainen JA., Westenhoff S. Only protein-protein interactions imex curation bphy_deira Bacteriophytochrome bphP Phytochrome-like protein DR_A0050 protein protein strain atcc 13939 /-9 Deinococcus radiodurans MSRDPLPFFPPLYLGGPEITTENCEREPIHIPGSIQPHGALLTADGHSGEVLQMSLNAATFLGQEPTVLRGQTLAALLPEQWPALQAALPPGCPDALQYRATLDWPAAGHLSLTVHRVGELLILEFEPTEAWDSTGPHALRNAMFALESAPNLRALAEVATQTVRELTGFDRVMLYKFAPDATGEVIAEARREGLHAFLGHRFPASDIPAQARALYTRHLLRLTADTRAAAVPLDPVLNPQTNAPTPLGGAVLRATSPMHMQYLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLEYLGRLLSLQVQVKEAADVAAFRQSLREHHARVALAAAHSLSPHDTLSDPALDLLGLMRAGGLILRFEGRWQTLGEVPPAPAVDALLAWLETQPGALVQTDALGQLWPAGADLAPSAAGLLAISVGEGWSECLVWLRPELRLEVAWGGATPDQAKDDLGPRHSFDTYLEEKRGYAEPWHPGEIEEAQDLRDTLTGALGERLSVIRDLNRALTQSNAEWRQYGFVISHHMQEPVRLISQFAELLTRQPRAQDGSPDSPQTERITGFLLRETSRLRSLTQDLHTYTALLSAPPPVRRPTPLGRVVDDVLQDLEPRIADTGASIEVAPELPVIAADAGLLRDLLLHLIGNALTFGGPEPRIAVRTERQGAGWSIAVSDQGAGIAPEYQERIFLLFQRLGSLDEALGNGLGLPLCRKIAELHGGTLTVESAPGEGSTFRCWLPDAGPLPGAADA A631E471B208F187 bphp-6 3265636 N/A 3265639 unspecified role unspecified role unspecified role unspecified role Region 1-502 Region 1-502 sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli direct interaction direct interaction false false false bphp-7 3265637 N/A 3265639 unspecified role unspecified role unspecified role unspecified role Region 1-502 Region 1-502 sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli direct interaction direct interaction false false false bphp-8 3265638 N/A 3265639 unspecified role unspecified role unspecified role unspecified role Region 1-502 Region 1-502 sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli direct interaction direct interaction false false false