DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ schulz-2012-8 ecolx Escherichia coli x-ray diffraction x-ray crystallography X-ray X-ray x-ray diffraction predetermined predetermined participant predetermined Schulz S., Iglesias-Cans M., Krah A., Yildiz O., Leone V., Matthies D., Cook GM., Faraldo-Gómez JD., Meier T. DIP original experiment: DIP-252442X PLoS biology 2012 IMEx A new type of Na(+)-driven ATP synthase membrane rotor with a two-carboxylate ion-coupling motif. Schulz S., Iglesias-Cans M., Krah A., Yildiz O., Leone V., Matthies D., Cook GM., Faraldo-Gómez JD., Meier T. Only protein-protein interactions imex curation schulz-2012-9 ecolx Escherichia coli comigration in sds comigration in sds page comigration in sds weight silver stain molecular weight estimation by silver staining weight silver stain Schulz S., Iglesias-Cans M., Krah A., Yildiz O., Leone V., Matthies D., Cook GM., Faraldo-Gómez JD., Meier T. DIP original experiment: DIP-252443X PLoS biology 2012 IMEx A new type of Na(+)-driven ATP synthase membrane rotor with a two-carboxylate ion-coupling motif. Schulz S., Iglesias-Cans M., Krah A., Yildiz O., Leone V., Matthies D., Cook GM., Faraldo-Gómez JD., Meier T. Only protein-protein interactions imex curation schulz-2012-10 fusnn Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column ms participant Identification by mass spectrometry ms participant Schulz S., Iglesias-Cans M., Krah A., Yildiz O., Leone V., Matthies D., Cook GM., Faraldo-Gómez JD., Meier T. DIP original experiment: DIP-252444X PLoS biology 2012 IMEx A new type of Na(+)-driven ATP synthase membrane rotor with a two-carboxylate ion-coupling motif. Schulz S., Iglesias-Cans M., Krah A., Yildiz O., Leone V., Matthies D., Cook GM., Faraldo-Gómez JD., Meier T. Only protein-protein interactions imex curation atpl_fusnn ATP synthase subunit c atpE ATP synthase F(0) sector subunit c F-type ATPase subunit c Lipid-binding protein FN0363 protein protein fusnn Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) MDLLTAKTIVLGCSAVGAGLAMIAGLGPGIGEGYAAGKAVESVARQPEARGSIISTMILGQAVAESTGIYSLVIALILLYANPFLSKLG atpf_fusnn ATP synthase subunit b atpF ATP synthase F(0) sector subunit b ATPase subunit I F-type ATPase subunit b FN0362 protein protein fusnn Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) MPIISIDYTFFWQIINFFLLLFIVKKYFKEPISKIINERKQKIEAELVEATKNKKEAEQLLKDAEAQINASRKEATEIVKAAQRKAEEEAHNLIREARENRENILKTTELEITKIKNDAKEELGREVKNLAAELAEKIIKEKVDDAQEISLIDKFIAEVGEDK atpd_fusnn ATP synthase subunit delta atpH ATP synthase F(1) sector subunit delta F-type ATPase subunit delta FN0361 protein protein fusnn Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) MIKSQVGRRYSKAIFEIAEEKKQVKEIYEMLNSAMVLYRTDKEFKHFILNPLIDNEQKKSVLNEIFGKDNSENLNILLYILDKGRMNCIKYIVAEYLKIYYRKNRILDVKATFTKELTDEQKKKLIDKLSQKTGKEINLEIKIDKDILGGGIIKIGDKIIDGSIRRELDNWRKS atpg_fusnn ATP synthase gamma chain atpG ATP synthase F1 sector gamma subunit F-ATPase gamma subunit FN0359 protein protein fusnn Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) MPGMKEIKSRIKSVQSTRQITNAMEIVSTTKFKRYSKLVTESRPYEESMRKILGNIASGVKNEGHPLFDGRKEVKSIAIIVITSDRGLCGSFNSSTLKELEKLVEKNKNKNITIIPFGRKAIDFITKRNYEFSESFSKISPDEMNKIAGEISEEVVEKYNNHIYDEVYVIYNKFISALRYDLTCERIIPITRPEVELNSEYIFEPSTEYILSALLPRFINLQIYQAILNNTASEHSARKNSMSSATDNADEMIKTLNIKYNRNRQSAITQEITEIVGGASAL atpb_fusnn ATP synthase subunit beta atpD ATP synthase F1 sector subunit beta F-ATPase subunit beta FN0358 protein protein fusnn Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) MNKGTITQIISAVVDIAFKDELPAIYNALKVKLEDKELVLEVEQHLGNNVVRTVAMDSTDGLKRGMEVIDTGKPITIPVGKAVLGRILNVLGEPVDNQGPLNAETFLPIHREAPEFDDLETETEIFETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYGEMTESGVITKTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPNLATEMGALQERITSTKSGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLSRNIASLGIYPAVDPLDSTSKALSEDVVGKEHYEVARKVQEVLQRYKELQDIIAILGMDELSDEDKLTVSRARKIERFFSQPFSVAEQFTGMEGKYVPVKETIRGFREILEGKHDDIPEQAFLYVGTIEEAVAKSKDLAK atpa_fusnn ATP synthase subunit alpha atpA ATP synthase F1 sector subunit alpha F-ATPase subunit alpha FN0360 protein protein fusnn Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) MNIRPEEVSSIIKKEIDNYKKSLEIKTSGTVLEVGDGIARIFGLSNVMSGELLEFPHGVMGMALNLEEDNVGAVILGNASLIKEGDEVRATGKVVSVPAGEDLLGRVINALGDPIDGKGEIHVDKYMPIERKASGIIARQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAIAIDTIINQKGQDVKCIYVAIGQKRSTVAQIYKKLSDLGCMDYTIIVAATASEAAPLQYMAPYSGVAIGEYFMEKGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAINAGISVSRVGGAAQIKAMKQVASKVKLELAQYTELLTFAQFGSDLDKATKAQLERGHRIMEILKQPQYHPFAVERQVVSFYIVINGHLDDIEVSKVRRFEKELLDYLKANTNILTEIADKKALDKDLEEKLKESIANFKKSFN atpe-3 3255402 N/A 3255405 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false atpe-4 3255403 N/A 3255405 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false atpa-atpd-8 3255404 N/A 3255406 unspecified role unspecified role unspecified role unspecified role fusnn Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) N/A 3255407 unspecified role unspecified role unspecified role unspecified role fusnn Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) N/A 3255408 unspecified role unspecified role unspecified role unspecified role fusnn Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) N/A 3255409 unspecified role unspecified role unspecified role unspecified role fusnn Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) N/A 3255410 unspecified role unspecified role unspecified role unspecified role fusnn Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) physical association physical association false false false