DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ ermolenko-2011-1 in vitro In vitro fret fluorescent resonance energy transfer FRET RET FRET analysis FRET RET FRET analysis fret predetermined predetermined participant predetermined Ermolenko DN., Noller HF. DIP original experiment: DIP-218518X Nature structural & molecular biology 2011 IMEx mRNA translocation occurs during the second step of ribosomal intersubunit rotation. Ermolenko DN., Noller HF. Only protein-protein interactions imex curation ermolenko-2011-2 in vitro In vitro fret fluorescent resonance energy transfer FRET RET FRET analysis FRET RET FRET analysis fret predetermined predetermined participant predetermined Ermolenko DN., Noller HF. DIP original experiment: DIP-218519X Nature structural & molecular biology 2011 IMEx mRNA translocation occurs during the second step of ribosomal intersubunit rotation. Ermolenko DN., Noller HF. Only protein-protein interactions imex curation rl9_ecoli 50S ribosomal protein L9 rplI Large ribosomal subunit protein bL9 JW4161 b4203 protein protein ecoli Escherichia coli (strain K12) MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE rs6_ecoli 30S ribosomal protein S6 rpsF Small ribosomal subunit protein bS6 JW4158 b4200 protein protein ecoli Escherichia coli (strain K12) MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANETADDAEAGDSEEEEEE rs11_ecoli 30S ribosomal protein S11 rpsK Small ribosomal subunit protein uS11 JW3259 b3297 protein protein ecoli Escherichia coli (strain K12) MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV rpsf-rpli-1 3223398 N/A 3223400 unspecified role unspecified role fluorescence accept fluorescence acceptor fluorescence accept Alexa568-label Alexa568-label alexa 568 label alexa 568 label certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli N/A 3223401 unspecified role unspecified role fluorescence donor fluorescence donor Alexa488-label Alexa488-label alexa 488 label alexa 488 label certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli physical association physical association false false false rpsk-rpli-1 3223399 N/A 3223402 unspecified role unspecified role fluorescence donor fluorescence donor Alexa488-label Alexa488-label alexa 488 label alexa 488 label certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli N/A 3223400 unspecified role unspecified role fluorescence accept fluorescence acceptor fluorescence accept Alexa568-label Alexa568-label alexa 568 label alexa 568 label certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli physical association physical association false false false