DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ ito-2010-1 ecolx Escherichia coli x-ray diffraction x-ray crystallography X-ray X-ray x-ray diffraction predetermined predetermined participant predetermined Ito T., Yokoyama S. DIP original experiment: DIP-219352X Nature 2010 IMEx Two enzymes bound to one transfer RNA assume alternative conformations for consecutive reactions. Ito T., Yokoyama S. Only protein-protein interactions imex curation ito-2010-2 ecolx Escherichia coli molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column predetermined predetermined participant predetermined Ito T., Yokoyama S. DIP original experiment: DIP-219354X Nature 2010 IMEx Two enzymes bound to one transfer RNA assume alternative conformations for consecutive reactions. Ito T., Yokoyama S. Only protein-protein interactions imex curation ito-2010-3 ecolx Escherichia coli molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column predetermined predetermined participant predetermined Ito T., Yokoyama S. DIP original experiment: DIP-219353X Nature 2010 IMEx Two enzymes bound to one transfer RNA assume alternative conformations for consecutive reactions. Ito T., Yokoyama S. Only protein-protein interactions imex curation sye2_thema Glutamate--tRNA ligase 2 gltX2 Glutamyl-tRNA synthetase 2 TM_1875 protein protein thema Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) MFITGAFFDILEVGPKKIRRCFELVRVRFAPSPTGHLHVGGARTALFNWMFARKEGGKFILRIEDTDTERSSREYEQQILESLRWCGLDWDEGPDIGGDFGPYRQSERLEIYREYAEKLVEDKRAYYVVYDKEDPSKELFTTYEYPHEYKEKGHPVTIKFKVLPGKTSFEDLLKGYMEFDNSTLEDFIIMKSNGFPTYNFAVVVDDHLMRISHVFRGEDHLSNTPKQLMIYEAFGWEAPVFMHIPLILGSDRTPLSKRHGATSVEHFRREGILSRALMNYLALLGWRVEGDEIFTIEEKLQSFDPKDISNKGVIFDYQKLEWVNGKHMRRIDLEDLKREFIEWAKYAGKEIPSVDERYFSETLRICREKVNTLSQLYDIMYPFMNDDYEYEKDYVEKFLKREEAERVLEEAKKAFKDLNSWNMEEIEKTLRDLSEKGLASKKVVFQLIRGAVTGKLVTPGLFETIEVLGKERTLKRLERTLQFLKKT 5E15A2E9E1580791 gatc_thema Glutamyl-tRNA(Gln) amidotransferase subunit C gatC TM_0252 protein protein thema Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) MIKVTKDLVLHLENLARLELSEDQRESLMKDFQEILDYVELLNEVDVEGVEPMYTPVEDSAKLRKGDPRFFEMRDLIKKNFPEEKDGHIKVPGIHR C3CAE53D43EA4404 gatb_thema Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B gatB TM_1273 protein protein thema Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) MRYRPVIGLEIHVQLSTKTKAFCSCPADVFELPPNTAICPVCTGQPGALPVPNEEMIRFAVKTALALNCKIHKYSRFDRKNYFYPDLPKGYQISQYFYPIATEGFLEIDGDEGRKKVRIRRLHLEEDAGKLVHEGDSITRASYSLVDMNRCGVPLIEIVTEPDISSPREARVFMEKLRSIVRYLGVSTGDMEKGALRCDANISVVDTETGRQSNRVEVKNMNSFRFVERALEYEFERIVKAMERGEDVERETRGWDMATKITVSMRGKEEESDYRYFPEPDIPPVVLSDEYLEEVKKELPELPDEKAERFMREYGLPEYDAKVLTSSKELAEFFEECVKVVNRPKDLSNWIMTEVLRELNERNIEITESKLTPQHFADLFKLMDEGKISIKIAKEIFPEVFETGKMPSQIVEEKGLTQINDEKLIEELVKKAMEQNPKAVQDYKSGKKKAAGFFVGYVMRETKGKANPELTNRIIQKLLEGE 34988170E32F312F gata_thema Glutamyl-tRNA(Gln) amidotransferase subunit A gatA TM_1272 protein protein thema Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) MIDLDFRKLTIEECLKLSEEEREKLPQLSLETIKRLDPHVKAFISVRENVSVEKKGKFWGIPVAIKDNILTLGMRTTCASRILENYESVFDATVVKKMKEAGFVVVGKANLDEFAMGSSTERSAFFPTRNPWDLERVPGGSSGGSAAAVSAGMVVAALGSDTGGSVRQPASLCGVVGYKPTYGLVSRYGLVAFASSLDQIGPITKTVRDAAILMEIISGRDENDATTVNRKVDFLSEIEEGVSGMKFAVPEEIYEHDIEEGVSERFEEALKLLERLGAKVERVKIPHIKYSVATYYVIAPAEASSNLARFDGVKYGLRIKEKGLREMYMKTRNVGFGEEVRRRIMIGTFTLSAAYYEAYFNKAMKVRRKISDELNEVLSQYDAILTPTSPVTAFKIGEIKDPLTYYLMDIFTIPANLAGLPAISVPFGFSNNLPVGVQVIGRRFADGKVFRIARAIEKNSPYNENGMFPLPEVKA 4F01EA3A2DCBD9A0 gata-gatb-5 3215393 N/A 3215396 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli N/A 3215397 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli N/A 3215398 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli N/A 3215399 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli physical association physical association false false false gata-gatb-6 3215394 N/A 3215397 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli N/A 3215398 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli N/A 3215399 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli physical association physical association false false false gata-gatb-7 3215395 N/A 3215396 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli N/A 3215397 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli N/A 3215398 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli N/A 3215399 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli physical association physical association false false false