DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ meyer-2009-1 ecolx Escherichia coli x-ray diffraction x-ray crystallography X-ray X-ray x-ray diffraction predetermined predetermined participant predetermined Meyer S., Böhme S., Krüger A., Steinhoff HJ., Klare JP., Wittinghofer A. DIP original experiment: DIP-132686X PLoS biology 2009 IMEx Kissing G domains of MnmE monitored by X-ray crystallography and pulse electron paramagnetic resonance spectroscopy. Meyer S., Böhme S., Krüger A., Steinhoff HJ., Klare JP., Wittinghofer A. Only protein-protein interactions imex curation meyer-2009-2 ecolx Escherichia coli epr electron paramagnetic resonance ESR EPR EPR ESR epr predetermined predetermined participant predetermined Meyer S., Böhme S., Krüger A., Steinhoff HJ., Klare JP., Wittinghofer A. DIP original experiment: DIP-132690X PLoS biology 2009 IMEx Kissing G domains of MnmE monitored by X-ray crystallography and pulse electron paramagnetic resonance spectroscopy. Meyer S., Böhme S., Krüger A., Steinhoff HJ., Klare JP., Wittinghofer A. Only protein-protein interactions imex curation meyer-2009-3 ecolx Escherichia coli x-ray diffraction x-ray crystallography X-ray X-ray x-ray diffraction predetermined predetermined participant predetermined Meyer S., Böhme S., Krüger A., Steinhoff HJ., Klare JP., Wittinghofer A. DIP original experiment: DIP-132687X PLoS biology 2009 IMEx Kissing G domains of MnmE monitored by X-ray crystallography and pulse electron paramagnetic resonance spectroscopy. Meyer S., Böhme S., Krüger A., Steinhoff HJ., Klare JP., Wittinghofer A. Only protein-protein interactions imex curation meyer-2009-4 ecolx Escherichia coli molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column predetermined predetermined participant predetermined Meyer S., Böhme S., Krüger A., Steinhoff HJ., Klare JP., Wittinghofer A. DIP original experiment: DIP-132691X PLoS biology 2009 IMEx Kissing G domains of MnmE monitored by X-ray crystallography and pulse electron paramagnetic resonance spectroscopy. Meyer S., Böhme S., Krüger A., Steinhoff HJ., Klare JP., Wittinghofer A. Only protein-protein interactions imex curation meyer-2009-5 ecolx Escherichia coli epr electron paramagnetic resonance ESR EPR EPR ESR epr predetermined predetermined participant predetermined Meyer S., Böhme S., Krüger A., Steinhoff HJ., Klare JP., Wittinghofer A. DIP original experiment: DIP-132688X PLoS biology 2009 IMEx Kissing G domains of MnmE monitored by X-ray crystallography and pulse electron paramagnetic resonance spectroscopy. Meyer S., Böhme S., Krüger A., Steinhoff HJ., Klare JP., Wittinghofer A. Only protein-protein interactions imex curation meyer-2009-6 ecolx Escherichia coli molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column predetermined predetermined participant predetermined Meyer S., Böhme S., Krüger A., Steinhoff HJ., Klare JP., Wittinghofer A. DIP original experiment: DIP-132692X PLoS biology 2009 IMEx Kissing G domains of MnmE monitored by X-ray crystallography and pulse electron paramagnetic resonance spectroscopy. Meyer S., Böhme S., Krüger A., Steinhoff HJ., Klare JP., Wittinghofer A. Only protein-protein interactions imex curation meyer-2009-7 ecolx Escherichia coli epr electron paramagnetic resonance ESR EPR EPR ESR epr predetermined predetermined participant predetermined Meyer S., Böhme S., Krüger A., Steinhoff HJ., Klare JP., Wittinghofer A. DIP original experiment: DIP-132689X PLoS biology 2009 IMEx Kissing G domains of MnmE monitored by X-ray crystallography and pulse electron paramagnetic resonance spectroscopy. Meyer S., Böhme S., Krüger A., Steinhoff HJ., Klare JP., Wittinghofer A. Only protein-protein interactions imex curation mnme_chlte tRNA modification GTPase MnmE mnmE thdF trmE CT2084 protein protein chlte Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) MSPSDLHLPVPGHPIAAIATPVGVGALAIVRISGAGVLDLADRVFRKVHGSGKLAEAAGYTAHFGRLYDGEEMVDEVIALVFRAPRSFTAEQMVEFTCHGGPVVVGRVLRLMLDNGCRLAEPGEFTRRAFLNGRIDLLQAEAIGEMIHARTESAYRTAVSQMKGDLSVRLGGLREQLIRSCALIELELDFSEEDVEFQSRDELTMQIETLRSEVNRLIDSYQHGRIVSEGVSTVIAGKPNAGKSTLLNTLLGQERAIVSHMPGTTRDYIEECFIHDKTMFRLTDTAGLREAGEEIEHEGIRRSRMKMAEADLILYLLDLGTERLDDELTEIRELKAAHPAAKFLTVANKLDRAANADALIRAIADGTGTEVIGISALNGDGIDTLKQHMGDLVKNLDKLHEASVLVTSLRHYEALRNASDALQNALELIAHESETELIAFELRAALDYVGQITGKVVNEEVLNTIFDKFCIGK B7F2E17B3A8793E2 mnme_ecoli tRNA modification GTPase MnmE mnmE trmE thdF b3706 JW3684 protein protein ecoli Escherichia coli (strain K12) MSDNDTIVAQATPPGRGGVGILRISGFKAREVAETVLGKLPKPRYADYLPFKDADGSVLDQGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPGLRIARPGEFSERAFLNDKLDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEEIDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETLGMSEVNGHALIRLSARTGEGVDVLRNHLKQSMGFDTNMEGGFLARRRHLQALEQAAEHLQQGKAQLLGAWAGELLAEELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK mnme_noss1 tRNA modification GTPase MnmE mnmE trmE all4677 protein protein noss1 Nostoc sp. (strain PCC 7120 / UTEX 2576) MAITGTIAAIATAIVPQQGSVGIVRVSGSQAIAIAQTLFDAPGKQVWESHRILYGYIRHPQTRQIVDEALLLLMKAPRSYTREDVVEFHCHGGIIAVQQVLQLCLESGARLAQPGEFTLRAFLNGRLDLTQAESIADLVGARSPQAAQTALAGLQGKLAHPIRQLRANCLDILAEIEARIDFEEDLPPLDDEAIISDIENIAAEISQLLATKDKGELLRTGLKVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVVGGIPVQVLDTAGIRETSDQVEKIGVERSRQAANTADLVLLTIDAATGWTTGDQEIYEQVKHRPLILVMNKIDLVEKQLITSLEYPENITQIVHTAAAQKQGIDSLETAILEIVQTGKVQAADMDLAINQRQAAALTQAKMSLEQVQATITQQLPLDFWTIDLRGAIQALGEITGEEVTESVLDRIFSRFCIGK ctmnme-1 3197246 N/A 3197253 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false mnme-1 3197247 N/A 3197254 unspecified role unspecified role unspecified role unspecified role E366R1 E366R1 r1 spin label r1 spin label certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli direct interaction direct interaction false false false mnme-2 3197248 N/A 3197255 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false ctmnme-2 3197249 N/A 3197253 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false mnme-3 3197250 N/A 3197254 unspecified role unspecified role unspecified role unspecified role S278R1 S278R1 r1 spin label r1 spin label certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli direct interaction direct interaction false false false mnme-4 3197251 N/A 3197255 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false mnme-5 3197252 N/A 3197254 unspecified role unspecified role unspecified role unspecified role E287R1 E287R1 r1 spin label r1 spin label certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli direct interaction direct interaction false false false